Pregenerated sensors for HRAT17 (Homo sapiens)
Ensembl gene IDs: ENSG00000234520Ensembl transcript IDs: ENST00000451962.5, ENST00000653138.1, ENST00000654823.1, ENST00000655508.1, ENST00000655518.1, ENST00000655743.1, ENST00000655822.1, ENST00000657218.1, ENST00000657319.1, ENST00000657442.1, ENST00000657800.1, ENST00000658790.1, ENST00000659589.1, ENST00000661750.1, ENST00000662144.1, ENST00000662721.1, ENST00000663321.1, ENST00000663489.1, ENST00000663513.1, ENST00000663899.1, ENST00000664053.1, ENST00000664332.1, ENST00000665351.1, ENST00000666073.1, ENST00000666383.1, ENST00000666984.1, ENST00000667102.1, ENST00000667715.1, ENST00000667780.1, ENST00000668166.1, ENST00000668296.1, ENST00000668328.1, ENST00000668427.1, ENST00000668532.1, ENST00000668658.1, ENST00000669304.1, ENST00000670812.1, ENST00000671010.1, ENST00000671176.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTGAAACAGGAGCGAACACTTGAATGGAGTCAATTATTCTCCCCCTaGTTCTCCATCCTGCAGATGGCAGACTGTGGGACTTGTCGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LKQERTLEWSQLFSP*FSILQMADCGTCRP Trigger: AGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAGGGGGAGAATAATTGACTCCATTCAAGTGTTCGCTCCTGTTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000451962.5 ENST00000663489.1 ENST00000663513.1 ENST00000664053.1 ENST00000668296.1 |
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| CDS GCA 90 bp | GAACACTTGAATGGAGTCAATTATTCTCCCCCTGGTTCTCCATCCTaGAGATGGCAGACTGTGGGACTTGTCGCCCTCCATAATCGAGAT | + |
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Preference number: 5 (lower is better) Translates to: EHLNGVNYSPPGSPS*RWQTVGLVALHNRD Trigger: ATCTCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAGGGGGAGAATAATTGACTCCATTCAAGTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000451962.5 ENST00000663489.1 ENST00000663513.1 ENST00000664053.1 ENST00000668296.1 |
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| CDS CCA 90 bp | GAGCGAACACTTGAATGGAGTCAATTATTCTCCCCCTATAAAGACTaGTTCTCCATCCTGCAGATGGCAGACTGTGGGACTTGTCGCCCT | + |
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Preference number: 5 (lower is better) Translates to: ERTLEWSQLFSPYKD*FSILQMADCGTCRP Trigger: AGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAGTCTTTATAGGGGGAGAATAATTGACTCCATTCAAGTGTTCGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000655508.1 ENST00000658790.1 ENST00000667102.1 ENST00000668427.1 |
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| CDS GCA 90 bp | AATGGAGTCAATTATTCTCCCCCTATAAAGACTGGTTCTCCATCCTaGAGATGGCAGACTGTGGGACTTGTCGCCCTCCATAATCGAGAT | + |
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Preference number: 5 (lower is better) Translates to: NGVNYSPPIKTGSPS*RWQTVGLVALHNRD Trigger: ATCTCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAGTCTTTATAGGGGGAGAATAATTGACTCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000655508.1 ENST00000658790.1 ENST00000667102.1 ENST00000668427.1 |
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| CDS CCA 90 bp | TTGAATGGAGTCAATTATTCTCCCCCTGGTTCTCCATCCTGCAGATaGCAGACTGTGGGACTTGTCGCCCTCCATAATCGAGATAACAAA | + |
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Preference number: 5 (lower is better) Translates to: LNGVNYSPPGSPSCR*QTVGLVALHNRDNK Trigger: TTTGTTATCTCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAGGGGGAGAATAATTGACTCCATTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000451962.5 ENST00000663489.1 ENST00000663513.1 ENST00000664053.1 ENST00000668296.1 |
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| CDS TCA 90 bp | ATTGGTATTTTAGTGAGAGGTAGGAAAAGCTGCCTGCTGGGCTGTTaGAGAAATGTTGACAGTTGCCAGGCCAGTACTCTGTATGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: IGILVRGRKSCLLGC*RNVDSCQASTLYVA Trigger: AGCCACATACAGAGTACTGGCCTGGCAACTGTCAACATTTCTTCAACAGCCCAGCAGGCAGCTTTTCCTACCTCTCACTAAAATACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657218.1 |
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| CDS CCA 90 bp | GGCTTCTCAGAGCATGGTTGCCTTAGGGTAGTTAGACTTTTTACATaGTGGCAAACTTCTCACAGAGCACAAAAGAGGATACTTCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GFSEHGCLRVVRLFT*WQTSHRAQKRILPG Trigger: GCCTGGAAGTATCCTCTTTTGTGCTCTGTGAGAAGTTTGCCACCATGTAAAAAGTCTAACTACCCTAAGGCAACCATGCTCTGAGAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS CCA 90 bp | CAGGAGCGAACACTTGAATGGAGTCAATTATTCTCCCCTTCCAACTaGCTTTCTGCTGAATTCTCCAGAGAATGGCTGGATTGTCACAGT | + |
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Preference number: 5 (lower is better) Translates to: QERTLEWSQLFSPSN*LSAEFSREWLDCHS Trigger: ACTGTGACAATCCAGCCATTCTCTGGAGAATTCAGCAGAAAGCCAGTTGGAAGGGGAGAATAATTGACTCCATTCAAGTGTTCGCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665351.1 |
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| CDS CCA 90 bp | TGGGACTTGTCGCCCTCCATAATCGAGATAACAAATTCTTCCAACTaGCTTTCTGCTGAATTCTCCAGAGAATGGCTGGATTGTCACAGT | + |
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Preference number: 5 (lower is better) Translates to: WDLSPSIIEITNSSN*LSAEFSREWLDCHS Trigger: ACTGTGACAATCCAGCCATTCTCTGGAGAATTCAGCAGAAAGCCAGTTGGAAGAATTTGTTATCTCGATTATGGAGGGCGACAAGTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659589.1 ENST00000668296.1 ENST00000668427.1 |
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| CDS TCA 90 bp | CCTATGGATAGCATATCCTATTTCCTCAACCCACTGTATGATCCTTaGGGACACAACCCAAGGTCCGTATCTACATCAAAGTGTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: PMDSISYFLNPLYDP*GHNPRSVSTSKCPS Trigger: TGATGGACACTTTGATGTAGATACGGACCTTGGGTTGTGTCCTCAAGGATCATACAGTGGGTTGAGGAAATAGGATATGCTATCCATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS TCA 90 bp | GCCCTCCATAATCGAGATAACAAATTCTTCCAACTGGCTTTCTGCTaGATTCTCCAGAGAATGGCTGGATTGTCACAGTGGTTGCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: ALHNRDNKFFQLAFC*ILQRMAGLSQWLPL Trigger: TAAAGGCAACCACTGTGACAATCCAGCCATTCTCTGGAGAATTCAGCAGAAAGCCAGTTGGAAGAATTTGTTATCTCGATTATGGAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659589.1 ENST00000668296.1 ENST00000668427.1 |
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| CDS GCA 90 bp | TCTTCCTTTATGATGCCTGGAATCCTTTTCCATAGTTCCCAGAGTTaGATGCTCTCTGCTGTACCAAATCCTGTTCTGTTCAGCATTTTG | + |
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Preference number: 5 (lower is better) Translates to: SSFMMPGILFHSSQS*MLSAVPNPVLFSIL Trigger: CAAAATGCTGAACAGAACAGGATTTGGTACAGCAGAGAGCATGCAACTCTGGGAACTATGGAAAAGGATTCCAGGCATCATAAAGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655743.1 |
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| CDS TCA 90 bp | CCATATTTATTCCAAATGTCTCCTCACTCTTCAGCCATAGTTGATTaGAACAGGAGCGAACACTTGAATGGAGTCAATTATTCTCCCCCT | + |
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Preference number: 5 (lower is better) Translates to: PYLFQMSPHSSAIVD*NRSEHLNGVNYSPP Trigger: AGGGGGAGAATAATTGACTCCATTCAAGTGTTCGCTCCTGTTTCAATCAACTATGGCTGAAGAGTGAGGAGACATTTGGAATAAATATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 29 transcripts: ENST00000451962.5 ENST00000653138.1 ENST00000654823.1 ENST00000655508.1 ENST00000655743.1 ENST00000657319.1 ENST00000657442.1 ENST00000657800.1 ENST00000658790.1 ENST00000662144.1 ENST00000662721.1 ENST00000663321.1 ENST00000663489.1 ENST00000663513.1 ENST00000664053.1 ENST00000664332.1 ENST00000666073.1 ENST00000666383.1 ENST00000666984.1 ENST00000667102.1 ENST00000667715.1 ENST00000667780.1 ENST00000668166.1 ENST00000668296.1 ENST00000668427.1 ENST00000668532.1 ENST00000668658.1 ENST00000671010.1 ENST00000671176.1 |
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| CDS TCA 90 bp | GAAGCCATATTTATTCCAAATGTCTCCTCACTCTTCAGCCATAGTTaGTTGAAACAGGAGCGAACACTTGAATGGAGTCAATTATTCTCC | + |
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Preference number: 5 (lower is better) Translates to: EAIFIPNVSSLFSHS*LKQERTLEWSQLFS Trigger: GGAGAATAATTGACTCCATTCAAGTGTTCGCTCCTGTTTCAATCAACTATGGCTGAAGAGTGAGGAGACATTTGGAATAAATATGGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 33 transcripts: ENST00000451962.5 ENST00000653138.1 ENST00000654823.1 ENST00000655508.1 ENST00000655518.1 ENST00000655743.1 ENST00000657319.1 ENST00000657442.1 ENST00000657800.1 ENST00000658790.1 ENST00000662144.1 ENST00000662721.1 ENST00000663321.1 ENST00000663489.1 ENST00000663513.1 ENST00000663899.1 ENST00000664053.1 ENST00000664332.1 ENST00000665351.1 ENST00000666073.1 ENST00000666383.1 ENST00000666984.1 ENST00000667102.1 ENST00000667715.1 ENST00000667780.1 ENST00000668166.1 ENST00000668296.1 ENST00000668427.1 ENST00000668532.1 ENST00000668658.1 ENST00000669304.1 ENST00000671010.1 ENST00000671176.1 |
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| CDS TCA 90 bp | CCATATTTATTCCAAATGTCTCCTCACTCTTCAGCCATAGTTGATTaGAACAGGAGCGAACACTTGAATGGAGTCAATTATTCTCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: PYLFQMSPHSSAIVD*NRSEHLNGVNYSPQ Trigger: TTGGGGAGAATAATTGACTCCATTCAAGTGTTCGCTCCTGTTTCAATCAACTATGGCTGAAGAGTGAGGAGACATTTGGAATAAATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655518.1 ENST00000663899.1 ENST00000669304.1 |
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| CDS TCA 90 bp | CCATATTTATTCCAAATGTCTCCTCACTCTTCAGCCATAGTTGATTaGAACAGGAGCGAACACTTGAATGGAGTCAATTATTCTCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: PYLFQMSPHSSAIVD*NRSEHLNGVNYSPL Trigger: AAGGGGAGAATAATTGACTCCATTCAAGTGTTCGCTCCTGTTTCAATCAACTATGGCTGAAGAGTGAGGAGACATTTGGAATAAATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665351.1 |
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| CDS CCA 90 bp | TCTATAGGTTGTCTGTTCACTCTCATGGTAGCTTCTTTTGCTGTATaGAAGCTCTTTAGTTTAATGAGATCCCATCTGTCAATTTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: SIGCLFTLMVASFAV*KLFSLMRSHLSIFA Trigger: AGCAAAAATTGACAGATGGGATCTCATTAAACTAAAGAGCTTCCATACAGCAAAAGAAGCTACCATGAGAGTGAACAGACAACCTATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000655822.1 ENST00000657442.1 ENST00000662721.1 ENST00000663899.1 ENST00000664332.1 ENST00000666073.1 ENST00000666383.1 ENST00000667715.1 ENST00000667780.1 ENST00000668166.1 ENST00000668658.1 ENST00000669304.1 ENST00000671176.1 |
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| CDS CCA 72 bp | GCCAGTGGCCTCAATTCTCTACAGGACCTCTCCACCTaGATAGGTTGGGCTTCTCAGAGCATGGTTGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: ASGLNSLQDLST*IGWASQSMVAL Trigger: TAAGGCAACCATGCTCTGAGAAGCCCAACCTATCCAGGTGGAGAGGTCCTGTAGAGAATTGAGGCCACTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS CCA 72 bp | TTCCTTCCATGCCATGCTGGTTCTCCATCCTGCAGATaGCAGACTGTGGGACTTGTCGCCCTCCATAATCGA | + |
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Preference number: 6 (lower is better) Translates to: FLPCHAGSPSCR*QTVGLVALHNR Trigger: TCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAGCATGGCATGGAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661750.1 ENST00000668328.1 |
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| CDS CAA 72 bp | ATCTTTCCCACAGCCAGAGGTAGGCTGGCTTCCATCTaGATTGTCAGTGCTGCAGTGAGCTCCGTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: IFPTARGRLASI*IVSAAVSSVLL Trigger: CAGAAGAACGGAGCTCACTGCAGCACTGACAATCAAGATGGAAGCCAGCCTACCTCTGGCTGTGGGAAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657218.1 |
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| CDS CCA 72 bp | GCCATGCTGGTTCTCCATCCTGCAGATGGCAGACTGTaGGACTTGTCGCCCTCCATAATCGAGATAACAAAT | + |
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Preference number: 6 (lower is better) Translates to: AMLVLHPADGRL*DLSPSIIEITN Trigger: ATTTGTTATCTCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAGCATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661750.1 ENST00000668328.1 |
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| CDS CCA 72 bp | AGAAGAAGGAAACAGACTGGTTCTCCATCCTGCAGATaGCAGACTGTGGGACTTGTCGCCCTCCATAATCGA | + |
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Preference number: 6 (lower is better) Translates to: RRRKQTGSPSCR*QTVGLVALHNR Trigger: TCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAGTCTGTTTCCTTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657319.1 |
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| CDS CAA 72 bp | CTGGTTCTCCATCCTGCAGATGGCAGACTGTGGGACTaGTCGCCCTCCATAATCGAGATAACAAATTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LVLHPADGRLWD*SPSIIEITNSW Trigger: CCAGGAATTTGTTATCTCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451962.5 ENST00000667102.1 |
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| CDS CAA 72 bp | GTAGGAAAAGCTGCCTGCTGGGCTGTTGAAGAAATGTaGACAGTTGCCAGGCCAGTACTCTGTATGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VGKAACWAVEEM*TVARPVLCMWL Trigger: GAGCCACATACAGAGTACTGGCCTGGCAACTGTCAACATTTCTTCAACAGCCCAGCAGGCAGCTTTTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657218.1 |
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| CDS TCA 72 bp | TTAGTGAGAGGTAGGAAAAGCTGCCTGCTGGGCTGTTaGAGAAATGTTGACAGTTGCCAGGCCAGTACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LVRGRKSCLLGC*RNVDSCQASTL Trigger: CAGAGTACTGGCCTGGCAACTGTCAACATTTCTTCAACAGCCCAGCAGGCAGCTTTTCCTACCTCTCACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657218.1 |
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| CDS CAA 72 bp | CTGGTTCTCCATCCTGCAGATGGCAGACTGTGGGACTaGTCGCCCTCCATAATCGAGATAACAAATTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LVLHPADGRLWD*SPSIIEITNSS Trigger: GGAAGAATTTGTTATCTCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659589.1 ENST00000668296.1 ENST00000668427.1 |
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| CDS GCA 72 bp | TTAAATGATGGATTTGAGCATGTTCCTTCCATGCCATaGTGGTTCTCCATCCTGCAGATGGCAGACTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LNDGFEHVPSMP*WFSILQMADCG Trigger: CCCACAGTCTGCCATCTGCAGGATGGAGAACCAGCATGGCATGGAAGGAACATGCTCAAATCCATCATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661750.1 ENST00000668328.1 |
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| CDS CCA 72 bp | CCAGAAGCCATATTTATTCCAAATGTCTCCTCACTCTaGTTCTCCATCCTGCAGATGGCAGACTGTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: PEAIFIPNVSSL*FSILQMADCGT Trigger: AGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAGAGTGAGGAGACATTTGGAATAAATATGGCTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659589.1 ENST00000670812.1 |
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| CDS CAA 72 bp | CTGGTTCTCCATCCTGCAGATGGCAGACTGTGGGACTaGTCGCCCTCCATAATCGAGATAACAAATTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LVLHPADGRLWD*SPSIIEITNSF Trigger: AAAGGAATTTGTTATCTCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663513.1 |
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| CDS CAA 90 bp | GAATCATCAATCTTTCCCACAGCCAGAGGTAGGCTGGCTTCCATCTaGATTGTCAGTGCTGCAGTGAGCTCCGTTCTTCTGTGTTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: ESSIFPTARGRLASI*IVSAAVSSVLLCFY Trigger: ATAAAAACACAGAAGAACGGAGCTCACTGCAGCACTGACAATCAAGATGGAAGCCAGCCTACCTCTGGCTGTGGGAAAGATTGATGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657218.1 |
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| CDS GCA 72 bp | TGCCTGGAATCCTTTTCCATAGTTCCCAGAGTTGCATaGTCTCTGCTGTACCAAATCCTGTTCTGTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CLESFSIVPRVA*SLLYQILFCSA Trigger: TGCTGAACAGAACAGGATTTGGTACAGCAGAGAGCATGCAACTCTGGGAACTATGGAAAAGGATTCCAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655743.1 |
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| CDS CAA 72 bp | CTGGTTCTCCATCCTGCAGATGGCAGACTGTGGGACTaGTCGCCCTCCATAATCGAGATAACAAATTCAATA | + |
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Preference number: 6 (lower is better) Translates to: LVLHPADGRLWD*SPSIIEITNSI Trigger: TATTGAATTTGTTATCTCGATTATGGAGGGCGACAAGTCCCACAGTCTGCCATCTGCAGGATGGAGAACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000655508.1 ENST00000657319.1 ENST00000658790.1 ENST00000661750.1 ENST00000663489.1 ENST00000664053.1 ENST00000668328.1 ENST00000670812.1 |
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| CDS GCA 72 bp | ATGATGCCTGGAATCCTTTTCCATAGTTCCCAGAGTTaGATGCTCTCTGCTGTACCAAATCCTGTTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: MMPGILFHSSQS*MLSAVPNPVLF Trigger: GAACAGAACAGGATTTGGTACAGCAGAGAGCATGCAACTCTGGGAACTATGGAAAAGGATTCCAGGCATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655743.1 |
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| CDS TCA 72 bp | AGCATATCCTATTTCCTCAACCCACTGTATGATCCTTaGGGACACAACCCAAGGTCCGTATCTACATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SISYFLNPLYDP*GHNPRSVSTSK Trigger: CTTTGATGTAGATACGGACCTTGGGTTGTGTCCTCAAGGATCATACAGTGGGTTGAGGAAATAGGATATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS TCA 72 bp | GTCTTCGTCATGAAATCTTTGTCCGTGCCTATGTCCTaGATGGCATTGCCTAGGTTTTCTTCTAGGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: VFVMKSLSVPMS*MALPRFSSRVF Trigger: GAAAACCCTAGAAGAAAACCTAGGCAATGCCATTCAGGACATAGGCACGGACAAAGATTTCATGACGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000655822.1 ENST00000657442.1 ENST00000662721.1 ENST00000663321.1 ENST00000663899.1 ENST00000664332.1 ENST00000665351.1 ENST00000666073.1 ENST00000666383.1 ENST00000667715.1 ENST00000667780.1 ENST00000668166.1 ENST00000668658.1 ENST00000669304.1 ENST00000671010.1 ENST00000671176.1 |
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| CDS GCA 72 bp | TCTCCACACAGCATCCAGAGTGATTCTTTCAGAACATaGCAGTTTATGTCACTTATCTCCTCACAACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPHSIQSDSFRT*QFMSLISSQLS Trigger: GGAGAGTTGTGAGGAGATAAGTGACATAAACTGGCATGTTCTGAAAGAATCACTCTGGATGCTGTGTGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000655743.1 ENST00000657442.1 ENST00000662144.1 ENST00000664053.1 ENST00000665351.1 ENST00000668166.1 ENST00000668296.1 ENST00000668532.1 |
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| CDS CAA 90 bp | CAGGCCAAGTTGGTCTATTATATCTTGAGCAATTCTAATGGACCTTaGCCTAACTTGCCTCTCCTACCTATCATGCCTTTTCCATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: QAKLVYYILSNSNGP*PNLPLLPIMPFPCL Trigger: AAGGCATGGAAAAGGCATGATAGGTAGGAGAGGCAAGTTAGGCAAAGGTCCATTAGAATTGCTCAAGATATAATAGACCAACTTGGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS TCA 72 bp | CAGGCCTTTTTCAGGCCAAGTTGGTCTATTATATCTTaGGCAATTCTAATGGACCTTTGCCTAACTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QAFFRPSWSIIS*AILMDLCLTCL Trigger: GAGGCAAGTTAGGCAAAGGTCCATTAGAATTGCTCAAGATATAATAGACCAACTTGGCCTGAAAAAGGCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS TCA 72 bp | TTGCTTTTGTTGCAGTTGTTTTTGGCGTCTTCGTCATaGAATCTTTGTCCGTGCCTATGTCCTGAATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LLLLQLFLASSS*NLCPCLCPEWH Trigger: ATGCCATTCAGGACATAGGCACGGACAAAGATTTCATGACGAAGACGCCAAAAACAACTGCAACAAAAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 18 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000655822.1 ENST00000657442.1 ENST00000662721.1 ENST00000663321.1 ENST00000663899.1 ENST00000664332.1 ENST00000666073.1 ENST00000666383.1 ENST00000667715.1 ENST00000667780.1 ENST00000668166.1 ENST00000668658.1 ENST00000669304.1 ENST00000671010.1 ENST00000671176.1 |
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| CDS CAA 72 bp | CCAGGCCTTTTTCAGGCCAAGTTGGTCTATTATATCTaGAGCAATTCTAATGGACCTTTGCCTAACTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PGLFQAKLVYYI*SNSNGPLPNLP Trigger: AGGCAAGTTAGGCAAAGGTCCATTAGAATTGCTCAAGATATAATAGACCAACTTGGCCTGAAAAAGGCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS CAA 90 bp | CACAGAGCACAAAAGAGGATACTTCCAGGCCTTTTTCAGGCCAAGTaGGTCTATTATATCTTGAGCAATTCTAATGGACCTTTGCCTAAC | + |
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Preference number: 6 (lower is better) Translates to: HRAQKRILPGLFQAK*VYYILSNSNGPLPN Trigger: GTTAGGCAAAGGTCCATTAGAATTGCTCAAGATATAATAGACCAACTTGGCCTGAAAAAGGCCTGGAAGTATCCTCTTTTGTGCTCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS CCA 72 bp | CATGGTTGCCTTAGGGTAGTTAGACTTTTTACATGGTaGCAAACTTCTCACAGAGCACAAAAGAGGATACTT | + |
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Preference number: 6 (lower is better) Translates to: HGCLRVVRLFTW*QTSHRAQKRIL Trigger: AAGTATCCTCTTTTGTGCTCTGTGAGAAGTTTGCCACCATGTAAAAAGTCTAACTACCCTAAGGCAACCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS CAA 72 bp | TATATCTTGAGCAATTCTAATGGACCTTTGCCTAACTaGCCTCTCCTACCTATCATGCCTTTTCCATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: YILSNSNGPLPN*PLLPIMPFPCL Trigger: AAGGCATGGAAAAGGCATGATAGGTAGGAGAGGCAAGTTAGGCAAAGGTCCATTAGAATTGCTCAAGATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS TCA 72 bp | TTTATTCCAAATGTCTCCTCACTCTTCAGCCATAGTTaGTTGAAACAGGAGCGAACACTTGAATGGAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: FIPNVSSLFSHS*LKQERTLEWSQ Trigger: TTGACTCCATTCAAGTGTTCGCTCCTGTTTCAATCAACTATGGCTGAAGAGTGAGGAGACATTTGGAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 33 transcripts: ENST00000451962.5 ENST00000653138.1 ENST00000654823.1 ENST00000655508.1 ENST00000655518.1 ENST00000655743.1 ENST00000657319.1 ENST00000657442.1 ENST00000657800.1 ENST00000658790.1 ENST00000662144.1 ENST00000662721.1 ENST00000663321.1 ENST00000663489.1 ENST00000663513.1 ENST00000663899.1 ENST00000664053.1 ENST00000664332.1 ENST00000665351.1 ENST00000666073.1 ENST00000666383.1 ENST00000666984.1 ENST00000667102.1 ENST00000667715.1 ENST00000667780.1 ENST00000668166.1 ENST00000668296.1 ENST00000668427.1 ENST00000668532.1 ENST00000668658.1 ENST00000669304.1 ENST00000671010.1 ENST00000671176.1 |
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| CDS CCA 72 bp | TGTCTGTTCACTCTCATGGTAGCTTCTTTTGCTGTATaGAAGCTCTTTAGTTTAATGAGATCCCATCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: CLFTLMVASFAV*KLFSLMRSHLS Trigger: TGACAGATGGGATCTCATTAAACTAAAGAGCTTCCATACAGCAAAAGAAGCTACCATGAGAGTGAACAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000655822.1 ENST00000657442.1 ENST00000662721.1 ENST00000663899.1 ENST00000664332.1 ENST00000666073.1 ENST00000666383.1 ENST00000667715.1 ENST00000667780.1 ENST00000668166.1 ENST00000668658.1 ENST00000669304.1 ENST00000671176.1 |
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| CDS CAA 72 bp | CAAAAGAGGATACTTCCAGGCCTTTTTCAGGCCAAGTaGGTCTATTATATCTTGAGCAATTCTAATGGACCT | + |
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Preference number: 6 (lower is better) Translates to: QKRILPGLFQAK*VYYILSNSNGP Trigger: AGGTCCATTAGAATTGCTCAAGATATAATAGACCAACTTGGCCTGAAAAAGGCCTGGAAGTATCCTCTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS CAA 90 bp | TTGGTCTATTATATCTTGAGCAATTCTAATGGACCTTTGCCTAACTaGCCTCTCCTACCTATCATGCCTTTTCCATGCCTTTTTGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: LVYYILSNSNGPLPN*PLLPIMPFPCLFAN Trigger: ATTAGCAAAAAGGCATGGAAAAGGCATGATAGGTAGGAGAGGCAAGTTAGGCAAAGGTCCATTAGAATTGCTCAAGATATAATAGACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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| CDS CAA 90 bp | GAAAAATTTCTAATTGTTCCGCCTCTGTGTGATAGCTCTTTCCTTTaGAAATCTGGCAACTCCTATTCTTTGTACTATTCACTTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: EKFLIVPPLCDSSFL*KSGNSYSLYYSLLI Trigger: AATGAGAAGTGAATAGTACAAAGAATAGGAGTTGCCAGATTTCAAAAGGAAAGAGCTATCACACAGAGGCGGAACAATTAGAAATTTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000653138.1 ENST00000654823.1 ENST00000655518.1 ENST00000657800.1 ENST00000662144.1 ENST00000663321.1 ENST00000664332.1 ENST00000666383.1 ENST00000669304.1 ENST00000671010.1 |
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