RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HRAS (Homo sapiens)

Ensembl gene IDs: ENSG00000174775

Ensembl transcript IDs: ENST00000311189.8, ENST00000397594.5, ENST00000397594.6, ENST00000397596.6, ENST00000417302.5, ENST00000417302.6, ENST00000451590.5, ENST00000462734.2, ENST00000468682.2, ENST00000479482.1, ENST00000493230.5, ENST00000610977.3, ENST00000615062.2, ENST00000616241.4, ENST00000631404.1, ENST00000631627.1, ENST00000631967.1, ENST00000632658.1, ENST00000632849.1, ENST00000633137.1, ENST00000634098.1

Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTaGGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCAC +
Preference number: 1 (lower is better)
Translates to: GHPVGVAAALGVPLT*VRRAHTCSSCSRGH
Trigger: GTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR GCA 90 bp GCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCT +
Preference number: 1 (lower is better)
Translates to: AALGVPLTCVRRAHT*SSCSRGHSHQEGSA
Trigger: AGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR GCA 90 bp TGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTCCTGAGCTTGTGCTGGGCGGGGCAC +
Preference number: 1 (lower is better)
Translates to: CFRPSFLLLPSAPPS*IRHLHVLSLCWAGH
Trigger: GTGCCCCGCCCAGCACAAGCTCAGGACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR GCA 90 bp TGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTCCTGAGCTTGTGCTGCGTCAGGAGA +
Preference number: 1 (lower is better)
Translates to: CFRPSFLLLPSAPPS*IRHLHVLSLCCVRR
Trigger: TCTCCTGACGCAGCACAAGCTCAGGACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
3UTR-3UTR TCA 90 bp GGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGCACAAGGGAGGCTGCTaGCCGCAGGCCAGGAGACCG +
Preference number: 2 (lower is better)
Translates to: GHPVGVAAALGVPLTCVRHKGGC*PQARRP
Trigger: CGGTCTCCTGGCCTGCGGTCAGCAGCCTCCCTTGTG...CCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR CCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGTCATCCGGTGGGCGTaGCGGCCGCCCTGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPAVIRWA*RPPWES
Trigger: GGACTCCCAGGGCGGCCGCCACGCCCACCGGATGAC...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR CCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGGTCATCCGGTGGGCGTaGCGGCCGCCCTGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQVIRWA*RPPWES
Trigger: GGACTCCCAGGGCGGCCGCCACGCCCACCGGATGAC...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR TCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCACAAGGGAGGCTGCTaGCCGCAGGCCAGGAGACCG +
Preference number: 2 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLHKGGC*PQARRP
Trigger: CGGTCTCCTGGCCTGCGGTCAGCAGCCTCCCTTGTG...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR GCA 90 bp CCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: PGSSGGRGGRPGSPPHLRPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...ACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR GCA 90 bp CCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGAGCAAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 2 (lower is better)
Translates to: PVGVAAALGVPLTCVRRASFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...TGCTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR GCA 90 bp CCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 2 (lower is better)
Translates to: PGSSGGRGGRPGSPPHLRHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...ACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR GCA 90 bp GGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 2 (lower is better)
Translates to: GHPVGVAAALGVPLTCVRSAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...CCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR GCA 90 bp ATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGAGAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 2 (lower is better)
Translates to: IRWAWRPPWESPSPASGESFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...CTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR GCA 90 bp CCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 2 (lower is better)
Translates to: PVGVAAALGVPLTCVRRAHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...TGCTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR GCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 2 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLCAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTGTCATCCGGTGGGCGTaGCGGCCGCCCTGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPVIRWA*RPPWES
Trigger: GGACTCCCAGGGCGGCCGCCACGCCCACCGGATGAC...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR CAA 90 bp GGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: GRPGSPPHLRQESTH*QLMQPGPLSSGGFS
Trigger: GCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR GCA 90 bp CTCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 2 (lower is better)
Translates to: LPGRVCSHLGPRSRGDWASAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...AGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 2 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLSAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGTTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 2 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp GCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGGTCATCCGGTGGGCGTaGCGGCCGCCCTGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: ATLIRRVQLPQLVLPDLTVIRWA*RPPWES
Trigger: GGACTCCCAGGGCGGCCGCCACGCCCACCGGATGAC...CGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR CCA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGGTCATCCGGTGGGCGTaGCGGCCGCCCTGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: IYCDPICARQGPTEAWEGVIRWA*RPPWES
Trigger: GGACTCCCAGGGCGGCCGCCACGCCCACCGGATGAC...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR TCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCACAAGGGAGGCTGCTaGCCGCAGGCCAGGAGACCG +
Preference number: 2 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPHKGGC*PQARRP
Trigger: CGGTCTCCTGGCCTGCGGTCAGCAGCCTCCCTTGTG...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR GCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPLPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPRSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp CCTCCATGTCCTGAGCTTGTGCTGGGCGGGGCACAAGGGAGGCTGCTGACCGCACCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: PPCPELVLGGAQGRLLTAPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...TGCGGTCAGCAGCCTCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR GCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGACTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGLPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGACGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGRSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp CCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCATTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 2 (lower is better)
Translates to: PPHLRQESTHLQLMQPGPFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...TGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR CCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 2 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp AGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 2 (lower is better)
Translates to: SPPHLRQESTHLQLMQPGSAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR GCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCCATGTCCTGAGCTTGTaGTGGGCGGGGCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLHVLSL*WAGHKG
Trigger: TCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATG...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR GCA 90 bp AGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGTTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 2 (lower is better)
Translates to: SPPHLRQESTHLQLMQPGFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR GCA 90 bp GCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 2 (lower is better)
Translates to: AASGEHTLAAHAAGATLISFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...GATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
3UTR-3UTR CCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCCGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSRSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 2 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPCAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGCTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: IIYCDPICARQGPTEAWELPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGACATGTCCTGAGCTTGTaGTGGGCGGGGCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGHVLSL*WAGHKG
Trigger: TCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATG...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR GCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 2 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGCGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: PIIYCDPICARQGPTEAWRSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGTCATCCGGTGGGCGTaGCGGCCGCCCTGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: DHPIIYCDPICARQGPTEVIRWA*RPPWES
Trigger: GGACTCCCAGGGCGGCCGCCACGCCCACCGGATGAC...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR GCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 2 (lower is better)
Translates to: GDWAPAALPSFLASVLPSSAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp TGTCCTGAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: CPELVLRQESTHLQLMQPPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...CGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTCAGGACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
3UTR-3UTR TCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGCACAAGGGAGGCTGCTaGCCGCAGGCCAGGAGACCG +
Preference number: 2 (lower is better)
Translates to: DHPIIYCDPICARQGPTEHKGGC*PQARRP
Trigger: CGGTCTCCTGGCCTGCGGTCAGCAGCCTCCCTTGTG...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR GCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCCATGTCCTGAGCTTGTaGTGGGCGGGGCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSHVLSL*WAGHKG
Trigger: TCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATG...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR-3UTR GCA 90 bp AGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCATTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 2 (lower is better)
Translates to: RAHTCSSCSRGHSHQEGSFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...TGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGCGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: DHPIIYCDPICARQGPTERSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: PIIYCDPICARQGPTEAWPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACACTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: QDHPIIYCDPICARQGPTLPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 2 (lower is better)
Translates to: PIIYCDPICARQGPTEAWSFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 2 (lower is better)
Translates to: IIYCDPICARQGPTEAWECAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGAGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 2 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 2 (lower is better)
Translates to: DHPIIYCDPICARQGPTECAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACACCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: QDHPIIYCDPICARQGPTPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR TCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGTCCAATAATTTACTGTaGTCCCATCTGTGCCCGACA +
Preference number: 2 (lower is better)
Translates to: PIIYCDPICARQGPTEAWSNNLL*SHLCPT
Trigger: TGTCGGGCACAGATGGGATCACAGTAAATTATTGGA...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 2 (lower is better)
Translates to: DHPIIYCDPICARQGPTEGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR CCA 72 bp GGAGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTaGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACA +
Preference number: 3 (lower is better)
Translates to: GAGVIRWAWRPP*ESPSPASGEHT
Trigger: TGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR CAA 90 bp ATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGAGTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 3 (lower is better)
Translates to: IRWAWRPPWESPSPASGEFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...CTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR GCA 72 bp GGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGCCACTCTCATCAGGAG +
Preference number: 3 (lower is better)
Translates to: GVPLTCVRRAHT*SSCSRGHSHQE
Trigger: CTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR-3UTR CAA 90 bp TGGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 3 (lower is better)
Translates to: WESPSPASGEHTLAAHAAFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...GGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
3UTR GCA 72 bp CCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTCCTGAGCTTGTGCTGC +
Preference number: 3 (lower is better)
Translates to: PSFLLLPSAPPS*IRHLHVLSLCC
Trigger: GCAGCACAAGCTCAGGACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311189.8
ENST00000493230.5
ENST00000615062.2
ENST00000634098.1
3UTR GCA 72 bp CCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTCCTGAGCTTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: PSFLLLPSAPPS*IRHLHVLSLCW
Trigger: CCAGCACAAGCTCAGGACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
3UTR GCA 72 bp GTCCTGAGCTTGTGCTGCGTCAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGCCACTCTCATCAGGAG +
Preference number: 3 (lower is better)
Translates to: VLSLCCVRRAHT*SSCSRGHSHQE
Trigger: CTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
3UTR-3UTR CAA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGG +
Preference number: 3 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSQESTH*QLMQPG
Trigger: CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTG...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CAA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 3 (lower is better)
Translates to: IYCDPICARQGPTEAWEGGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CAA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGAGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 3 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
3UTR-3UTR CAA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 3 (lower is better)
Translates to: IIYCDPICARQGPTEAWEGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp AGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCCTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: SRGHPVGVAAALGVPLTCLRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...GCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR TCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGCACAAGGGAGGCTGCTaGCCGCAGGCCAGGAGACCG +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQHKGGC*PQARRP
Trigger: CGGTCTCCTGGCCTGCGGTCAGCAGCCTCCCTTGTG...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp AGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: SRGHPVGVAAALGVPLTCSFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...GCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp AGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: SRGHPVGVAAALGVPLTCPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...GCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCACTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPALPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGCTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQLPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp AGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCCATGTCCTGAGCTTGTaGTGGGCGGGGCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: SRGHPVGVAAALGVPLTCHVLSL*WAGHKG
Trigger: TCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATG...GCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp AGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGGAGTCCCCCTCACCTaGGTCAGGAGAGCACACACT +
Preference number: 4 (lower is better)
Translates to: SRGHPVGVAAALGVPLTCGVPLT*VRRAHT
Trigger: AGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCC...GCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CCA 90 bp CTCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPGRVCSHLGPRSRGDWARSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...AGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp AGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: SRGHPVGVAAALGVPLTCCAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...GCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR TCA 90 bp GCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTCACAAGGGAGGCTGCTaGCCGCAGGCCAGGAGACCG +
Preference number: 4 (lower is better)
Translates to: AWRPPWESPSPASGEHTLHKGGC*PQARRP
Trigger: CGGTCTCCTGGCCTGCGGTCAGCAGCCTCCCTTGTG...AAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CCA 90 bp CCTCCATGTCCTGAGCTTGTGCTGGGCGGGGCACAAGGGAGGCTGCTGACCGCAGTCATCCGGTGGGCGTaGCGGCCGCCCTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PPCPELVLGGAQGRLLTAVIRWA*RPPWES
Trigger: GGACTCCCAGGGCGGCCGCCACGCCCACCGGATGAC...TGCGGTCAGCAGCCTCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGTCCTACAGGGTCTCCTaGCCCACCGTTCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQSYRVS*PTVHRR
Trigger: GCGCCTGTGAACGGTGGGGCAGGAGACCCTGTAGGA...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311189.8
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000634098.1
CDS-3UTR GCA 90 bp ATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGAGGGAGTCCCCCTCACCTaGGTCAGGAGAGCACACACT +
Preference number: 4 (lower is better)
Translates to: IRWAWRPPWESPSPASGEGVPLT*VRRAHT
Trigger: AGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCC...CTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CCA 90 bp CTCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTGCGCTGTACTCCTCCTaGCCGGCGGTATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LPGRVCSHLGPRSRGDWAALYSS*PAVSRM
Trigger: CATCCTGGATACCGCCGGCCAGGAGGAGTACAGCGC...AGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCTCCCTGCCGGGTCTTaGCCGAGGTCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLLPAGS*PRSRCR
Trigger: CCTACATCGAGACCTCGGCCAAGACCCGGCAGGGAG...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000631404.1
CDS-3UTR CCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCACTCCCTGCCGGGTCTTaGCCGAGGTCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPALPAGS*PRSRCR
Trigger: CCTACATCGAGACCTCGGCCAAGACCCGGCAGGGAG...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000631404.1
CDS-3UTR CCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCATGCCCTGCCGGGTCTTaGCCGAGGTCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPACPAGS*PRSRCR
Trigger: CCTACATCGAGACCTCGGCCAAGACCCGGCAGGGCA...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCAGCGCGAGGGGCCGCTaGGTCACATGGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PGPLSSGGFSFRSLCCRISARGR*VTWVPG
Trigger: CCCCGGGACCCATGTGACCCAGCGGCCCCTCGCGCT...GATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGGCACCTCCATGTCCTaGGCTTGTGCTGCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPAGTSMS*ACAASG
Trigger: TCCTGACGCAGCACAAGCTCAGGACATGGAGGTGCC...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311189.8
ENST00000493230.5
ENST00000634098.1
CDS-3UTR TCA 90 bp CCTCCATGTCCTGAGCTTGTGCTGGGCGGGGCACAAGGGAGGCTGCTGACCGCACACAAGGGAGGCTGCTaGCCGCAGGCCAGGAGACCG +
Preference number: 4 (lower is better)
Translates to: PPCPELVLGGAQGRLLTAHKGGC*PQARRP
Trigger: CGGTCTCCTGGCCTGCGGTCAGCAGCCTCCCTTGTG...TGCGGTCAGCAGCCTCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLSFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPASFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQSFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQRRAHT*SSCSRG
Trigger: GCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCT...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLRRAHT*SSCSRG
Trigger: GCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCT...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCACCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPAPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGCATGTCCTGAGCTTGTaGTGGGCGGGGCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQHVLSL*WAGHKG
Trigger: TCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATG...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CCA 90 bp CCTCCATGTCCTGAGCTTGTGCTGGGCGGGGCACAAGGGAGGCTGCTGACCGCACGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPCPELVLGGAQGRLLTARSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...TGCGGTCAGCAGCCTCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQCAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCGTCATCCGGTGGGCGTaGCGGCCGCCCTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PASGEHTLAAHAAGATLIVIRWA*RPPWES
Trigger: GGACTCCCAGGGCGGCCGCCACGCCCACCGGATGAC...GATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR TCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGACGTCTCCCCATCAATaGCCACCTGCTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQTSPHQ*PPASGR
Trigger: CCTACCGGAAGCAGGTGGTCATTGATGGGGAGACGT...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGTCCTTCACCCGTTTaGTCTGCTCCCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: GHPVGVAAALGVPLTCVRSPSPV*SAPCTG
Trigger: ACCAGTACAGGGAGCAGATCAAACGGGTGAAGGACT...CCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR GCA 90 bp AGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCTTCACCCGTTTGATCTaGTCCCTGTACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SRGHPVGVAAALGVPLTCFTRLI*SLYWWM
Trigger: CATCCACCAGTACAGGGAGCAGATCAAACGGGTGAA...GCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQSRCRG*RSFGRG
Trigger: ACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGA...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCTTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 4 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CTCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTTTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 4 (lower is better)
Translates to: LPGRVCSHLGPRSRGDWAFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...AGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCATTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPAFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCATCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPASAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp AGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: SPPHLRQESTHLQLMQPGLPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCAGCGCGAGGGGCCGCTaGGTCACATGGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSSARGR*VTWVPG
Trigger: CCCCGGGACCCATGTGACCCAGCGGCCCCTCGCGCT...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CCTCCATGTCCTGAGCTTGTGCTGGGCGGGGCACAAGGGAGGCTGCTGACCGCACTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: PPCPELVLGGAQGRLLTALRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...TGCGGTCAGCAGCCTCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGCATGTCCTGAGCTTGTaGTGCGTCAGGAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQHVLSL*CVRRAH
Trigger: GTGTGCTCTCCTGACGCAGCACAAGCTCAGGACATG...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311189.8
ENST00000493230.5
ENST00000615062.2
ENST00000634098.1
CDS-3UTR GCA 90 bp CCTGAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: PELVLRQESTHLQLMQPGLPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR GCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTTCCTACAGGGTCTCCTaGCCCACCTGTGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPSYRVS*PTCARG
Trigger: CCCGCGGGCACAGGTGGGGCAGGAGACCCTGTAGGA...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397596.6
ENST00000631404.1
CDS-3UTR CCA 90 bp GCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AHAAGATLIRRVQLPQLVRSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...CACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CTCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTAGTCCTTCACCCGTTTaGTCTGCTCCCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: LPGRVCSHLGPRSRGDWASPSPV*SAPCTG
Trigger: ACCAGTACAGGGAGCAGATCAAACGGGTGAAGGACT...AGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGGCACCTCCATGTCCTaGGCTTGTGCTGCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: AAGATLIRRVQLPQLVLPGTSMS*ACAASG
Trigger: TCCTGACGCAGCACAAGCTCAGGACATGGAGGTGCC...CGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR TCA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGCACAAGGGAGGCTGCTaGCCGCAGGCCAGGAGACCG +
Preference number: 4 (lower is better)
Translates to: IYCDPICARQGPTEAWEGHKGGC*PQARRP
Trigger: CGGTCTCCTGGCCTGCGGTCAGCAGCCTCCCTTGTG...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR TCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCCACAAGGGAGGCTGCTaGCCGCAGGCCAGGAGACCG +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSHKGGC*PQARRP
Trigger: CGGTCTCCTGGCCTGCGGTCAGCAGCCTCCCTTGTG...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp ATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGAGAGTTCACCCGTTTGATCTaGTCCCTGTACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: IRWAWRPPWESPSPASGEFTRLI*SLYWWM
Trigger: CATCCACCAGTACAGGGAGCAGATCAAACGGGTGAA...CTCTCCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR GCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCCTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSLPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCGCGCTGTACTCCTCCTaGCCGGCGGTATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGPLSSGGFSFRSLCCRIALYSS*PAVSRM
Trigger: CATCCTGGATACCGCCGGCCAGGAGGAGTACAGCGC...GATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCCGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSRSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCCGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLSSGGFSFRSLCCRISRRSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp AGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAACGTGTAGAAAGCGCGAGGGGCCGCTaGGTCACATGGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RVQLPQLVLPDLTHQRVESARGR*VTWVPG
Trigger: CCCCGGGACCCATGTGACCCAGCGGCCCCTCGCGCT...TTCTACACGTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
3UTR CAA 72 bp GGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: GSPPHLRQESTH*QLMQPGPLSSG
Trigger: TCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397594.5
ENST00000417302.5
ENST00000616241.4
ENST00000631967.1
CDS-3UTR TCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPLRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCCTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: GATLIRRVQLPQLVLPDLLRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...GAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCATCCTACAGGGTCTCCTaGCCCACCGTTCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: ELVLRQESTHLQLMQPGPSYRVS*PTVHRR
Trigger: GCGCCTGTGAACGGTGGGGCAGGAGACCCTGTAGGA...TGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR GCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCTTCACCCGTTTGATCTaGTCCCTGTACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLFTRLI*SLYWWM
Trigger: CATCCACCAGTACAGGGAGCAGATCAAACGGGTGAA...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAAGATTCCACAGTGCGTaGAGCCAGGTCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPARFHSA*SQVTLV
Trigger: AACAAGTGTGACCTGGCTGCACGCACTGTGGAATCT...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGCACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: AAGATLIRRVQLPQLVLPHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...CGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTGCGCTGTACTCCTCCTaGCCGGCGGTATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPALYSS*PAVSRM
Trigger: CATCCTGGATACCGCCGGCCAGGAGGAGTACAGCGC...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp TGGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGCGCTGTACTCCTCCTaGCCGGCGGTATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: WESPSPASGEHTLAAHAAALYSS*PAVSRM
Trigger: CATCCTGGATACCGCCGGCCAGGAGGAGTACAGCGC...GGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CCA 90 bp AGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: SPPHLRQESTHLQLMQPGCAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPAGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCTGCCCTGCCGGGTCTTaGCCGAGGTCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: PASGEHTLAAHAAGATLICPAGS*PRSRCR
Trigger: CCTACATCGAGACCTCGGCCAAGACCCGGCAGGGCA...GATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGTCATCCGGTGGGCGTaGCGGCCGCCCTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWVIRWA*RPPWES
Trigger: GGACTCCCAGGGCGGCCGCCACGCCCACCGGATGAC...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR TCA 90 bp ACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCACTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: TCSSCSRGHSHQEGSASALRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...TGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCCTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSLRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGACTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGLRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTACAGGGTCTCCTaGCCCACCGTTCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSSYRVS*PTVHRR
Trigger: GCGCCTGTGAACGGTGGGGCAGGAGACCCTGTAGGA...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311189.8
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000634098.1
CDS-3UTR GCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLSFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPSFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: ELVLRQESTHLQLMQPGPPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...TGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR GCA 90 bp CCTGAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: PELVLRQESTHLQLMQPGPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR GCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCGGAGTCCCCCTCACCTaGGTCAGGAGAGCACACACT +
Preference number: 4 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLGVPLT*VRRAHT
Trigger: AGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCC...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCGCGCTGTACTCCTCCTaGCCGGCGGTATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSALYSS*PAVSRM
Trigger: CATCCTGGATACCGCCGGCCAGGAGGAGTACAGCGC...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGTGCTCCCTGTACTGGTaGATGTCCTCAAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQCSLYW*MSSKDL
Trigger: CAAGTCTTTTGAGGACATCCACCAGTACAGGGAGCA...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAATCTGCTCCCTGTACTaGTGGATGTCCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPAICSLY*WMSSKD
Trigger: GTCTTTTGAGGACATCCACCAGTACAGGGAGCAGAT...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGCTCCCTGCCGGGTCTTaGCCGAGGTCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: IYCDPICARQGPTEAWEGLPAGS*PRSRCR
Trigger: CCTACATCGAGACCTCGGCCAAGACCCGGCAGGGAG...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000631404.1
CDS-3UTR CCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCCTCCCTGCCGGGTCTTaGCCGAGGTCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSLPAGS*PRSRCR
Trigger: CCTACATCGAGACCTCGGCCAAGACCCGGCAGGGAG...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000615062.2
ENST00000631404.1
CDS-3UTR CCA 90 bp CGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: RGHSHQEGSASAACAAGSCAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...AGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
3UTR CAA 72 bp GGGGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTaGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GVTGLQQPFLPS*LPSFLPPPSVC
Trigger: GCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000311189.8
ENST00000397594.5
ENST00000397596.6
ENST00000417302.5
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTACGTCTCCCCATCAATaGCCACCTGCTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPTSPHQ*PPASGR
Trigger: CCTACCGGAAGCAGGTGGTCATTGATGGGGAGACGT...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGTCTCCCCATCAATaGCCACCTGCTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: GATLIRRVQLPQLVLPDLTSPHQ*PPASGR
Trigger: CCTACCGGAAGCAGGTGGTCATTGATGGGGAGACGT...GAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCAAGACTTGGTGTTGTTaGTGGCAAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLKTWCC*WQTHTG
Trigger: TCCTGTGTGTGTTTGCCATCAACAACACCAAGTCTT...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CTCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTAAGACTTGGTGTTGTTaGTGGCAAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: LPGRVCSHLGPRSRGDWAKTWCC*WQTHTG
Trigger: TCCTGTGTGTGTTTGCCATCAACAACACCAAGTCTT...AGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAAAGACTTGGTGTTGTTaGTGGCAAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPAKTWCC*WQTHTG
Trigger: TCCTGTGTGTGTTTGCCATCAACAACACCAAGTCTT...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCGGCACCTCCATGTCCTaGGCTTGTGCTGCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSGTSMS*ACAASG
Trigger: TCCTGACGCAGCACAAGCTCAGGACATGGAGGTGCC...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311189.8
ENST00000493230.5
ENST00000615062.2
ENST00000634098.1
CDS-3UTR TCA 90 bp GGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGGCACCTCCATGTCCTaGGCTTGTGCTGCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GHSHQEGSASAACAAGSHGTSMS*ACAASG
Trigger: TCCTGACGCAGCACAAGCTCAGGACATGGAGGTGCC...GTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR TCA 90 bp CTCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTTCCAATAATTTACTGTaGTCCCATCTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: LPGRVCSHLGPRSRGDWASNNLL*SHLCPT
Trigger: TGTCGGGCACAGATGGGATCACAGTAAATTATTGGA...AGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCATCCAATAATTTACTGTaGTCCCATCTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPASNNLL*SHLCPT
Trigger: TGTCGGGCACAGATGGGATCACAGTAAATTATTGGA...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: RGHSHQEGSASAACAAGSAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...AGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLSRCRG*RSFGRG
Trigger: ACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGA...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PASGEHTLAAHAAGATLISRCRG*RSFGRG
Trigger: ACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGA...GATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR GCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCCACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ATLIRRVQLPQLVLPDLTRRAHT*SSCSRG
Trigger: GCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCT...CGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSRRAHT*SSCSRG
Trigger: GCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCT...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SCSRGHSHQEGSASAACARRAHT*SSCSRG
Trigger: GCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCT...AGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPSAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGACCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACCCTCCTCCTTCCGTCTaGACCTCCTTCCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: GHSHQEGSASAACAAGSHPPPSV*TSFLHP
Trigger: CGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGG...GTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGCTCCCTGGGAGGGTCTaGAGTCACCTCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWLPGRV*SHLGPR
Trigger: CCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCATGTCCTGAGCTTGTaGTGGGCGGGGCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: ATLIRRVQLPQLVLPDLTHVLSL*WAGHKG
Trigger: TCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATG...CGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR GCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCGGAGTCCCCCTCACCTaGGTCAGGAGAGCACACACT +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSGVPLT*VRRAHT
Trigger: AGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCC...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGCGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWERSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSCAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp ATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAACGTTGCCCTGCCGGGTCTTaGCCGAGGTCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: IRRVQLPQLVLPDLTHQRCPAGS*PRSRCR
Trigger: CCTACATCGAGACCTCGGCCAAGACCCGGCAGGGCA...ACGTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp GGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAACGTGTAGAAGGTGCCCTGCCGGGTCTTaGCCGAGGTCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: GSASAACAAGSHAPTCRRCPAGS*PRSRCR
Trigger: CCTACATCGAGACCTCGGCCAAGACCCGGCAGGGCA...CCTTCTACACGTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGACGTCTCCCCATCAATaGCCACCTGCTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: IYCDPICARQGPTEAWEGTSPHQ*PPASGR
Trigger: CCTACCGGAAGCAGGTGGTCATTGATGGGGAGACGT...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTCCTACAGGGTCTCCTaGCCCACCGTTCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSSYRVS*PTVHRR
Trigger: GCGCCTGTGAACGGTGGGGCAGGAGACCCTGTAGGA...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311189.8
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000634098.1
CDS-3UTR GCA 90 bp CCTCCATGTCCTGAGCTTGTGCTGGGCGGGGCACAAGGGAGGCTGCTGACCGCAAGATTCCACAGTGCGTaGAGCCAGGTCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: PPCPELVLGGAQGRLLTARFHSA*SQVTLV
Trigger: AACAAGTGTGACCTGGCTGCACGCACTGTGGAATCT...TGCGGTCAGCAGCCTCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGAGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: IYCDPICARQGPTEAWEGAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: RQESTHLQLMQPGPLSSGAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...TCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAAAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: LIRRVQLPQLVLPDLTHQSFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...TTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGACACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp ACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCACACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: TCSSCSRGHSHQEGSASAHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...TGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCCACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCCACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: PLSSGGFSFRSLCCRISRHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: ATLIRRVQLPQLVLPDLTHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...CGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGATCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGSAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp AGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCACATGTCCTGAGCTTGTaGTGGGCGGGGCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: RAHTCSSCSRGHSHQEGSHVLSL*WAGHKG
Trigger: TCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATG...TGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CCA 90 bp CACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCATGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: HSHQEGSASAACAAGSHACAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...TGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAAGCGCGAGGGGCCGCTaGGTCACATGGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTSARGR*VTWVPG
Trigger: CCCCGGGACCCATGTGACCCAGCGGCCCCTCGCGCT...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
3UTR CAA 72 bp TGTCCTGAGCTTGTGCTGCGTCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: CPELVLRQESTH*QLMQPGPLSSG
Trigger: TCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR TCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCAGTCCTTCACCCGTTTaGTCTGCTCCCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLSPSPV*SAPCTG
Trigger: ACCAGTACAGGGAGCAGATCAAACGGGTGAAGGACT...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCAAGTCCTTCACCCGTTTaGTCTGCTCCCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: ELVLRQESTHLQLMQPGPSPSPV*SAPCTG
Trigger: ACCAGTACAGGGAGCAGATCAAACGGGTGAAGGACT...TGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR TCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTAGTCCTTCACCCGTTTaGTCTGCTCCCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPSPSPV*SAPCTG
Trigger: ACCAGTACAGGGAGCAGATCAAACGGGTGAAGGACT...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGCTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWELRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGCTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWLRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAACGTGTAGAAGGGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: GSASAACAAGSHAPTCRRAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...CCTTCTACACGTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp AGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCATCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: RAHTCSSCSRGHSHQEGSSRCRG*RSFGRG
Trigger: ACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGA...TGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAATCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: LIRRVQLPQLVLPDLTHQSRCRG*RSFGRG
Trigger: ACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGA...TTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAACGTGTAGAAGGTTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 4 (lower is better)
Translates to: GSASAACAAGSHAPTCRRFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...CCTTCTACACGTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TGTCCTGAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGTTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 4 (lower is better)
Translates to: CPELVLRQESTHLQLMQPFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...CGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTCAGGACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR GCA 90 bp TCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTCATGTCCTGAGCTTGTaGTGCGTCAGGAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: SCSRGHSHQEGSASAACAHVLSL*CVRRAH
Trigger: GTGTGCTCTCCTGACGCAGCACAAGCTCAGGACATG...AGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR GCA 90 bp CACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCATCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: HSHQEGSASAACAAGSHASAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...TGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAATCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: LIRRVQLPQLVLPDLTHQSAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...TTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp AGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCATCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: RAHTCSSCSRGHSHQEGSSAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...TGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCGGAGTCCCCCTCACCTaGGTCAGGAGAGCACACACT +
Preference number: 4 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSGVPLT*VRRAHT
Trigger: AGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCC...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGCTCCCTGCCGGGTCTTaGCCGAGGTCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWLPAGS*PRSRCR
Trigger: CCTACATCGAGACCTCGGCCAAGACCCGGCAGGGAG...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000631404.1
CDS-3UTR CCA 90 bp CCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: PGPLSSGGFSFRSLCCRIGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...GATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGAAGTCCTTCACCCGTTTaGTCTGCTCCCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGSPSPV*SAPCTG
Trigger: ACCAGTACAGGGAGCAGATCAAACGGGTGAAGGACT...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CCTCCATGTCCTGAGCTTGTGCTGGGCGGGGCACAAGGGAGGCTGCTGACCGCATCCAATAATTTACTGTaGTCCCATCTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: PPCPELVLGGAQGRLLTASNNLL*SHLCPT
Trigger: TGTCGGGCACAGATGGGATCACAGTAAATTATTGGA...TGCGGTCAGCAGCCTCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCTTCACCCGTTTGATCTaGTCCCTGTACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLFTRLI*SLYWWM
Trigger: CATCCACCAGTACAGGGAGCAGATCAAACGGGTGAA...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTTTCACCCGTTTGATCTaGTCCCTGTACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPFTRLI*SLYWWM
Trigger: CATCCACCAGTACAGGGAGCAGATCAAACGGGTGAA...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TGGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCAGATTCCACAGTGCGTaGAGCCAGGTCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: WESPSPASGEHTLAAHAARFHSA*SQVTLV
Trigger: AACAAGTGTGACCTGGCTGCACGCACTGTGGAATCT...GGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR GCA 90 bp GCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGATTCCACAGTGCGTaGAGCCAGGTCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: ASGEHTLAAHAAGATLIRRFHSA*SQVTLV
Trigger: AACAAGTGTGACCTGGCTGCACGCACTGTGGAATCT...CCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSSRCRG*RSFGRG
Trigger: ACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGA...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 4 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp AGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAACGTGTAGAATTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 4 (lower is better)
Translates to: RVQLPQLVLPDLTHQRVEFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...TTCTACACGTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWERRAHT*SSCSRG
Trigger: GCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCT...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGAGGAGAGCACACACTTaGAGCTCATGCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWRRAHT*SSCSRG
Trigger: GCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCT...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAACATGTCCTGAGCTTGTaGTGCGTCAGGAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: LIRRVQLPQLVLPDLTHQHVLSL*CVRRAH
Trigger: GTGTGCTCTCCTGACGCAGCACAAGCTCAGGACATG...TTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR GCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGCATGTCCTGAGCTTGTaGTGGGCGGGGCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWHVLSL*WAGHKG
Trigger: TCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATG...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACATCCTACAGGGTCTCCTaGCCCACCTGTGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTSYRVS*PTCARG
Trigger: CCCGCGGGCACAGGTGGGGCAGGAGACCCTGTAGGA...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397596.6
ENST00000631404.1
CDS-3UTR GCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGAGTCCCCCTCACCTaGGTCAGGAGAGCACACACT +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWEGVPLT*VRRAHT
Trigger: AGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCC...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACACGGTCCCGGGGTGACTaGGCTCCAGCAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTRSRGD*APAALP
Trigger: AGGAAGGGCTGCTGGAGCCCAGTCACCCCGGGACCG...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGTGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWCAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp GCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: ASGEHTLAAHAAGATLIRGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...CCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGACGTCTCCCCATCAATaGCCACCTGCTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWETSPHQ*PPASGR
Trigger: CCTACCGGAAGCAGGTGGTCATTGATGGGGAGACGT...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGCTTCGGGCGAGGTCCTaGGCCTGCCGAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: DHPIIYCDPICARQGPTELRARS*ACRDST
Trigger: TGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAG...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGTCCTACAGGGTCTCCTaGCCCACCGTTCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: DHPIIYCDPICARQGPTESYRVS*PTVHRR
Trigger: GCGCCTGTGAACGGTGGGGCAGGAGACCCTGTAGGA...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311189.8
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000634098.1
CDS-3UTR GCA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGTTCACCCGTTTGATCTaGTCCCTGTACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: IYCDPICARQGPTEAWEGFTRLI*SLYWWM
Trigger: CATCCACCAGTACAGGGAGCAGATCAAACGGGTGAA...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCAGATTCCACAGTGCGTaGAGCCAGGTCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSRFHSA*SQVTLV
Trigger: AACAAGTGTGACCTGGCTGCACGCACTGTGGAATCT...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWSRCRG*RSFGRG
Trigger: ACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGA...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGCACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWESAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGTCTGCACCTCCTTCCTaGATCCGGCACCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWSAPPS*IRHLHV
Trigger: GACATGGAGGTGCCGGATGCAGGAAGGAGGTGCAGA...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCTGCTCCCTGTACTGGTaGATGTCCTCAAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLCSLYW*MSSKDL
Trigger: CAAGTCTTTTGAGGACATCCACCAGTACAGGGAGCA...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTTGCTCCCTGTACTGGTaGATGTCCTCAAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPCSLYW*MSSKDL
Trigger: CAAGTCTTTTGAGGACATCCACCAGTACAGGGAGCA...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp TGGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCTGCTCCCTGTACTGGTaGATGTCCTCAAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: WESPSPASGEHTLAAHAACSLYW*MSSKDL
Trigger: CAAGTCTTTTGAGGACATCCACCAGTACAGGGAGCA...GGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTATCTGCTCCCTGTACTaGTGGATGTCCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPICSLY*WMSSKD
Trigger: GTCTTTTGAGGACATCCACCAGTACAGGGAGCAGAT...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTATCTGCTCCCTGTACTaGTGGATGTCCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: RGHSHQEGSASAACAAGSICSLY*WMSSKD
Trigger: GTCTTTTGAGGACATCCACCAGTACAGGGAGCAGAT...AGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp GCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGATCTGCTCCCTGTACTaGTGGATGTCCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: AHAAGATLIRRVQLPQLVICSLY*WMSSKD
Trigger: GTCTTTTGAGGACATCCACCAGTACAGGGAGCAGAT...CACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: IYCDPICARQGPTEAWEGGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp TCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: SCSRGHSHQEGSASAACAGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...AGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCAAGACTTGGTGTTGTTaGTGGCAAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLKTWCC*WQTHTG
Trigger: TCCTGTGTGTGTTTGCCATCAACAACACCAAGTCTT...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCAGTCCTTCACCCGTTTaGTCTGCTCCCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSSPSPV*SAPCTG
Trigger: ACCAGTACAGGGAGCAGATCAAACGGGTGAAGGACT...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTTCCAATAATTTACTGTaGTCCCATCTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPSNNLL*SHLCPT
Trigger: TGTCGGGCACAGATGGGATCACAGTAAATTATTGGA...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCATTCACCCGTTTGATCTaGTCCCTGTACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: HSHQEGSASAACAAGSHAFTRLI*SLYWWM
Trigger: CATCCACCAGTACAGGGAGCAGATCAAACGGGTGAA...TGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp AGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAAGATTCCACAGTGCGTaGAGCCAGGTCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: RAHTCSSCSRGHSHQEGSRFHSA*SQVTLV
Trigger: AACAAGTGTGACCTGGCTGCACGCACTGTGGAATCT...TGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGCATGTCCTGAGCTTGTaGTGCGTCAGGAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWEHVLSL*CVRRAH
Trigger: GTGTGCTCTCCTGACGCAGCACAAGCTCAGGACATG...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311189.8
ENST00000493230.5
ENST00000634098.1
CDS-3UTR TCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCAAGACTTGGTGTTGTTaGTGGCAAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSKTWCC*WQTHTG
Trigger: TCCTGTGTGTGTTTGCCATCAACAACACCAAGTCTT...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGAAAGACTTGGTGTTGTTaGTGGCAAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGKTWCC*WQTHTG
Trigger: TCCTGTGTGTGTTTGCCATCAACAACACCAAGTCTT...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGAGTCCTTCACCCGTTTaGTCTGCTCCCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWSPSPV*SAPCTG
Trigger: ACCAGTACAGGGAGCAGATCAAACGGGTGAAGGACT...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGAGTCCTTCACCCGTTTaGTCTGCTCCCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWESPSPV*SAPCTG
Trigger: ACCAGTACAGGGAGCAGATCAAACGGGTGAAGGACT...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCAATAATTTACTGTaGTCCCATCTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: GDWAPAALPSFLASVLPSSNNLL*SHLCPT
Trigger: TGTCGGGCACAGATGGGATCACAGTAAATTATTGGA...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: DHPIIYCDPICARQGPTEAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: DHPIIYCDPICARQGPTESRCRG*RSFGRG
Trigger: ACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGA...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGTTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 4 (lower is better)
Translates to: DHPIIYCDPICARQGPTEFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAAGCTTCCGCAGCTTGTaGTGCCGGATCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTSFRSL*CRISRT
Trigger: GGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCT...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACACATGTCCTGAGCTTGTaGTGGGCGGGGCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTHVLSL*WAGHKG
Trigger: TCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATG...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CCA 90 bp ATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAACGTTGCTCCCTGTACTGGTaGATGTCCTCAAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: IRRVQLPQLVLPDLTHQRCSLYW*MSSKDL
Trigger: CAAGTCTTTTGAGGACATCCACCAGTACAGGGAGCA...ACGTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp TGTCCTGAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGATCTGCTCCCTGTACTaGTGGATGTCCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: CPELVLRQESTHLQLMQPICSLY*WMSSKD
Trigger: GTCTTTTGAGGACATCCACCAGTACAGGGAGCAGAT...CGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR CCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACATGTGCACAGCCTCCCTaGGAGGGTCTGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTCAQPP*EGLQSP
Trigger: AGGTGACTGCAGACCCTCCCAGGGAGGCTGTGCACA...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCATCCAATAATTTACTGTaGTCCCATCTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: HSHQEGSASAACAAGSHASNNLL*SHLCPT
Trigger: TGTCGGGCACAGATGGGATCACAGTAAATTATTGGA...TGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGAGATTCCACAGTGCGTaGAGCCAGGTCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWRFHSA*SQVTLV
Trigger: AACAAGTGTGACCTGGCTGCACGCACTGTGGAATCT...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGCCGAGATTCCACAGTaGGTGCAGCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTAEIPQ*VQPGHT
Trigger: AGTGTGACCTGGCTGCACGCACTGTGGAATCTCGGC...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACATCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTSRCRG*RSFGRG
Trigger: ACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGA...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACATTCCGCAGCTTGTGCTaGCGGATCTCACGCACCAAC +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTFRSLC*RISRTN
Trigger: GTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAA...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACACACACTTGCAGCTCATaGAGCCGGGGCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTHTCSS*SRGHSH
Trigger: ATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTG...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTGCTCCCTGTACTGGTaGATGTCCTCAAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSCSLYW*MSSKDL
Trigger: CAAGTCTTTTGAGGACATCCACCAGTACAGGGAGCA...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCATCTGCTCCCTGTACTaGTGGATGTCCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSICSLY*WMSSKD
Trigger: GTCTTTTGAGGACATCCACCAGTACAGGGAGCAGAT...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCAAGACTTGGTGTTGTTaGTGGCAAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSKTWCC*WQTHTG
Trigger: TCCTGTGTGTGTTTGCCATCAACAACACCAAGTCTT...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGTGCTCCCTGTACTGGTaGATGTCCTCAAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWECSLYW*MSSKDL
Trigger: CAAGTCTTTTGAGGACATCCACCAGTACAGGGAGCA...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGTGCTCCCTGTACTGGTaGATGTCCTCAAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: PIIYCDPICARQGPTEAWCSLYW*MSSKDL
Trigger: CAAGTCTTTTGAGGACATCCACCAGTACAGGGAGCA...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGAAGACTTGGTGTTGTTaGTGGCAAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWEKTWCC*WQTHTG
Trigger: TCCTGTGTGTGTTTGCCATCAACAACACCAAGTCTT...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGTCCAATAATTTACTGTaGTCCCATCTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: IIYCDPICARQGPTEAWESNNLL*SHLCPT
Trigger: TGTCGGGCACAGATGGGATCACAGTAAATTATTGGA...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGTTCACCCGTTTGATCTaGTCCCTGTACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: DHPIIYCDPICARQGPTEFTRLI*SLYWWM
Trigger: CATCCACCAGTACAGGGAGCAGATCAAACGGGTGAA...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACATTCACCCGTTTGATCTaGTCCCTGTACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTFTRLI*SLYWWM
Trigger: CATCCACCAGTACAGGGAGCAGATCAAACGGGTGAA...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR GCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAAGATTCCACAGTGCGTaGAGCCAGGTCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTRFHSA*SQVTLV
Trigger: AACAAGTGTGACCTGGCTGCACGCACTGTGGAATCT...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGGTTCCGGTGGCATTTaGGATGTTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTGSGGI*DVQDSL
Trigger: CAGACTGTCTTGAACATCCCAAATGCCACCGGAACC...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAATCTGCTCCCTGTACTaGTGGATGTCCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTICSLY*WMSSKD
Trigger: GTCTTTTGAGGACATCCACCAGTACAGGGAGCAGAT...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR TCA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACATCCAATAATTTACTGTaGTCCCATCTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: QDHPIIYCDPICARQGPTSNNLL*SHLCPT
Trigger: TGTCGGGCACAGATGGGATCACAGTAAATTATTGGA...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS TCA 90 bp CTGCCCAGTCCAGCGCCCGCCTCGCCCTCCTGCGCCGGTCGCTGCTaGCCCGGGGCTCCACCCACGTGCGGTCCCGGGGGTCCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: LPSPAPASPSCAGRC*PGAPPTCGPGGPAC
Trigger: GCAGGCGGGACCCCCGGGACCGCACGTGGGTGGAGCCCCGGGTCAGCAGCGACCGGCGCAGGAGGGCGAGGCGGGCGCTGGACTGGGCAG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462734.2
CDS GCA 90 bp ACTGGACGGCGGGCGGCAGCGTGTCCCGCGGGCCGGGCACTCGGGTaGGCTCCGGCGTCCGGTGTGTGTTTCCTGGTCCTCGGGGGCGCT +
Preference number: 5 (lower is better)
Translates to: TGRRAAACPAGRALG*APASGVCFLVLGGA
Trigger: AGCGCCCCCGAGGACCAGGAAACACACACCGGACGCCGGAGCGCACCCGAGTGCCCGGCCCGCGGGACACGCTGCCGCCCGCCGTCCAGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS TCA 90 bp GTCGCAGTCAGAGCTCGGCTCGGGGCGGACACGCATGAACGCGAGTaGGAAGCGGCGACTGGACGGCGGGCGGCAGCGTGTCCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: VAVRARLGADTHERE*EAATGRRAAACPAG
Trigger: GCCCGCGGGACACGCTGCCGCCCGCCGTCCAGTCGCCGCTTCTCACTCGCGTTCATGCGTGTCCGCCCCGAGCCGAGCTCTGACTGCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS TCA 90 bp CCACCGCGCGGTCGCAGTCAGAGCTCGGCTCGGGGCGGACACGCATaGACGCGAGTGAGAAGCGGCGACTGGACGGCGGGCGGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: PPRGRSQSSARGGHA*TRVRSGDWTAGGSV
Trigger: CACGCTGCCGCCCGCCGTCCAGTCGCCGCTTCTCACTCGCGTTCATGCGTGTCCGCCCCGAGCCGAGCTCTGACTGCGACCGCGCGGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS GCA 90 bp CCGCCCCGCGTGGGAAGCGCCAGGATCGCGAGGAAACGCGACACGTaGATCGCGACGGCCCAGGCACGGAGCCGCAGGAAGCTGGCACCT +
Preference number: 5 (lower is better)
Translates to: PPRVGSARIARKRDT*IATAQARSRRKLAP
Trigger: AGGTGCCAGCTTCCTGCGGCTCCGTGCCTGGGCCGTCGCGATGCACGTGTCGCGTTTCCTCGCGATCCTGGCGCTTCCCACGCGGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS CCA 90 bp GCGACACGTGCATCGCGACGGCCCAGGCACGGAGCCGCAGGAAGCTaGCACCTGACGCGCCTGCGCCCACCCAACTCGAGTTGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: ATRASRRPRHGAAGS*HLTRLRPPNSSWWR
Trigger: GCGCCACCAACTCGAGTTGGGTGGGCGCAGGCGCGTCAGGTGCCAGCTTCCTGCGGCTCCGTGCCTGGGCCGTCGCGATGCACGTGTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462734.2
CDS TCA 90 bp GTGCATCGCGACGGCCCAGGCACGGAGCCGCAGGAAGCTGGCACCTaGCGCGCCTGCGCCCACCCAACTCGAGTTGGTGGCGCGTCACCT +
Preference number: 5 (lower is better)
Translates to: VHRDGPGTEPQEAGT*RACAHPTRVGGASP
Trigger: AGGTGACGCGCCACCAACTCGAGTTGGGTGGGCGCAGGCGCGTCAGGTGCCAGCTTCCTGCGGCTCCGTGCCTGGGCCGTCGCGATGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462734.2
CDS-3UTR CAA 90 bp AGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 5 (lower is better)
Translates to: SRGHPVGVAAALGVPLTCFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...GCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS CCA 90 bp GGTGGGCGCGAGCCTCCAGCAGAGACCGCCTTTACCCGCCCCGCGTaGGAAGCGCCAGGATCGCGAGGAAACGCGACACGTGCATCGCGA +
Preference number: 5 (lower is better)
Translates to: GGREPPAETAFTRPA*EAPGSRGNATRASR
Trigger: TCGCGATGCACGTGTCGCGTTTCCTCGCGATCCTGGCGCTTCCCACGCGGGGCGGGTAAAGGCGGTCTCTGCTGGAGGCTCGCGCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS CCA 90 bp AAGGTCAGGACGGCAGGCCTCGGCCCCAGGGGCGACCCTTCCACCTaGGAAAGGTGGGCGCGAGCCTCCAGCAGAGACCGCCTTTACCCG +
Preference number: 5 (lower is better)
Translates to: KVRTAGLGPRGDPST*ERWARASSRDRLYP
Trigger: CGGGTAAAGGCGGTCTCTGCTGGAGGCTCGCGCCCACCTTTCCCAGGTGGAAGGGTCGCCCCTGGGGCCGAGGCCTGCCGTCCTGACCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS-3UTR CAA 90 bp GGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGTCAGGGCAGCCAGGTCACACTaGTTCCCCACCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: GHPVGVAAALGVPLTCVRAARSH*FPTSTM
Trigger: CATGGTGCTGGTGGGGAACAAGTGTGACCTGGCTGC...CCTGACGCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CAA 90 bp AGCCGGGGTCATCCGGTGGGCGTGGCGGCCGCCCTGGGAGTCCCCCTCACCTGCGAGTCCTTCACCCGTTaGATCTGCTCCCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: SRGHPVGVAAALGVPLTCESFTR*ICSLYW
Trigger: CCAGTACAGGGAGCAGATCAAACGGGTGAAGGACTC...GCAGGTGAGGGGGACTCCCAGGGCGGCCGCCACGCCCACCGGATGACCCCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CAA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLQESTH*QLMQPG
Trigger: CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTG...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCATTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 5 (lower is better)
Translates to: GRVCSHLGPRSRGDWAPAFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...TGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 5 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS GCA 90 bp AGCGGCTGCCCTGCCGGGTCTTGGCCGAGGTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGTCCTGAGCCTGCCGAGATTCCACAG +
Preference number: 5 (lower is better)
Translates to: SGCPAGSWPRSRCRG*RSFGRGPEPAEIPQ
Trigger: CTGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGACCTCGGCCAAGACCCGGCAGGGCAGCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397594.6
ENST00000417302.6
ENST00000493230.5
ENST00000616241.4
ENST00000631627.1
ENST00000631967.1
ENST00000632658.1
ENST00000634098.1
CDS GCA 90 bp GCCAGAGCGGCTGCCGGGTCTTGGCCGAGGTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGTCCTGAGCCTGCCGAGATTCCACAG +
Preference number: 5 (lower is better)
Translates to: ARAAAGSWPRSRCRG*RSFGRGPEPAEIPQ
Trigger: CTGTGGAATCTCGGCAGGCTCAGGACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGACCTCGGCCAAGACCCGGCAGCCGCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462734.2
CDS-3UTR CAA 90 bp CTCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCTCCATGTCCTGAGCTaGTGCTGCGTCAGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: LPGRVCSHLGPRSRGDWALHVLS*CCVRRA
Trigger: TGCTCTCCTGACGCAGCACAAGCTCAGGACATGGAG...AGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311189.8
ENST00000493230.5
ENST00000634098.1
CDS-3UTR CAA 90 bp CTCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTGAGTCCTTCACCCGTTaGATCTGCTCCCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: LPGRVCSHLGPRSRGDWAESFTR*ICSLYW
Trigger: CCAGTACAGGGAGCAGATCAAACGGGTGAAGGACTC...AGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGGAGTCCTTCACCCGTTaGATCTGCTCCCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQESFTR*ICSLYW
Trigger: CCAGTACAGGGAGCAGATCAAACGGGTGAAGGACTC...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 5 (lower is better)
Translates to: PLTCVRRAHTCSSCSRGHFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...GTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CAA 90 bp TCCCTGGGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: SLGGSAVTSAHGPGVTGLGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...GAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPQESTH*QLMQPG
Trigger: CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTG...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: RPSFLLLPSAPPSCIRHLQESTH*QLMQPG
Trigger: CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTG...GAGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PASGEHTLAAHAAGATLIQESTH*QLMQPG
Trigger: CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTG...GATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CAA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTGCAGCCAGGTCACACTaGTTCCCCACCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPAARSH*FPTSTM
Trigger: CATGGTGCTGGTGGGGAACAAGTGTGACCTGGCTGC...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGGCAGCCAGGTCACACTaGTTCCCCACCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: ASGEHTLAAHAAGATLIRAARSH*FPTSTM
Trigger: CATGGTGCTGGTGGGGAACAAGTGTGACCTGGCTGC...CCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 5 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 5 (lower is better)
Translates to: GATLIRRVQLPQLVLPDLFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...GAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: IYCDPICARQGPTEAWEGQESTH*QLMQPG
Trigger: CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTG...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: ATLIRRVQLPQLVLPDLTQESTH*QLMQPG
Trigger: CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTG...CGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCCTCCATGTCCTGAGCTaGTGCTGCGTCAGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: PGPLSSGGFSFRSLCCRILHVLS*CCVRRA
Trigger: TGCTCTCCTGACGCAGCACAAGCTCAGGACATGGAG...GATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR CAA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 5 (lower is better)
Translates to: IYCDPICARQGPTEAWEGFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp TCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 5 (lower is better)
Translates to: SCSRGHSHQEGSASAACAFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...AGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTCTCCATGTCCTGAGCTaGTGCTGCGTCAGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPLHVLS*CCVRRA
Trigger: TGCTCTCCTGACGCAGCACAAGCTCAGGACATGGAG...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311189.8
ENST00000493230.5
ENST00000615062.2
ENST00000634098.1
CDS-3UTR CAA 90 bp GGAGGGTCTGCAGTCACCTCGGCCCACGGTCCCGGGGTGACTGGGCTCCAGCAGATGTCCTCAAAAGACTaGGTGTTGTTGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: GGSAVTSAHGPGVTGLQQMSSKD*VLLMAN
Trigger: GTTTGCCATCAACAACACCAAGTCTTTTGAGGACAT...CTGCTGGAGCCCAGTCACCCCGGGACCGTGGGCCGAGGTGACTGCAGACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp TGGGAGTCCCCCTCACCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGAGTCCTTCACCCGTTaGATCTGCTCCCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: WESPSPASGEHTLAAHAAESFTR*ICSLYW
Trigger: CCAGTACAGGGAGCAGATCAAACGGGTGAAGGACTC...GGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGGTGAGGGGGACTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000616241.4
ENST00000631967.1
CDS-3UTR CAA 90 bp ATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGCTCCATGTCCTGAGCTaGTGCTGCGTCAGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: IYCDPICARQGPTEAWEGLHVLS*CCVRRA
Trigger: TGCTCTCCTGACGCAGCACAAGCTCAGGACATGGAG...CCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311189.8
ENST00000493230.5
ENST00000634098.1
CDS-3UTR CAA 90 bp TTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGGGAGAGTCCTTCACCCGTTaGATCTGCTCCCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: FTVIPSVPDKGPQRPGRGESFTR*ICSLYW
Trigger: CCAGTACAGGGAGCAGATCAAACGGGTGAAGGACTC...TCCCCTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp AGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAACGTGTAGAAGCAGCCAGGTCACACTaGTTCCCCACCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: RVQLPQLVLPDLTHQRVEAARSH*FPTSTM
Trigger: CATGGTGCTGGTGGGGAACAAGTGTGACCTGGCTGC...TTCTACACGTTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCGCAGCCAGGTCACACTaGTTCCCCACCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSAARSH*FPTSTM
Trigger: CATGGTGCTGGTGGGGAACAAGTGTGACCTGGCTGC...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCAGCTTCCGCAGCTaGTGCTGCCGGATCTCACGC +
Preference number: 5 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSFSFRS*CCRISR
Trigger: GCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAA...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PIIYCDPICARQGPTEAWQESTH*QLMQPG
Trigger: CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTG...CCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCTTCCTGCATCCGGCACCTGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: PSFLPPPSVCTSFLHPAPGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...AGGTGCCGGATGCAGGAAGGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: GATLIRRVQLPQLVLPDLGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...GAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: AHAAGATLIRRVQLPQLVGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...CACAAGCTGCGGAAGCTGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp AGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGAGTCCTTCACCCGTTaGATCTGCTCCCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: RAHTCSSCSRGHSHQEGSESFTR*ICSLYW
Trigger: CCAGTACAGGGAGCAGATCAAACGGGTGAAGGACTC...TGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp TGTCCTGAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCATGCAGCCGGAGTCCTTCACCCGTTaGATCTGCTCCCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: CPELVLRQESTHLQLMQPESFTR*ICSLYW
Trigger: CCAGTACAGGGAGCAGATCAAACGGGTGAAGGACTC...CGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTGACGCAGCACAAGCTCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493230.5
ENST00000634098.1
CDS-3UTR CAA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGGCAGCCAGGTCACACTaGTTCCCCACCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: IIYCDPICARQGPTEAWEAARSH*FPTSTM
Trigger: CATGGTGCTGGTGGGGAACAAGTGTGACCTGGCTGC...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GGTGACTGGGCTCCAGCAGCCCTTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: GDWAPAALPSFLASVLPSGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...GGAAGGAAGGACGGAAGCAAGGAAGGAAGGAAGGGCTGCTGGAGCCCAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CCTCCATGTCCTGAGCTTGTGCTGGGCGGGGCACAAGGGAGGCTGCTGACCGCAATGTCCTCAAAAGACTaGGTGTTGTTGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: PPCPELVLGGAQGRLLTAMSSKD*VLLMAN
Trigger: GTTTGCCATCAACAACACCAAGTCTTTTGAGGACAT...TGCGGTCAGCAGCCTCCCTTGTGCCCCGCCCAGCACAAGCTCAGGACATGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397596.6
ENST00000451590.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCGAGTCCTTCACCCGTTaGATCTGCTCCCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSESFTR*ICSLYW
Trigger: CCAGTACAGGGAGCAGATCAAACGGGTGAAGGACTC...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGCAGGAGAGCACACACTaGCAGCTCATGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: DHPIIYCDPICARQGPTEQESTH*QLMQPG
Trigger: CCCCGGCTGCATGAGCTGCAAGTGTGTGCTCTCCTG...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp AGAGCACACACTTGCAGCTCATGCAGCCGGGGCCACTCTCATCAGGAGGGTTCAGGGTTCCGGTGGCATTaGGGATGTTCAAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: RAHTCSSCSRGHSHQEGSGFRWH*GCSRQS
Trigger: AGACTGTCTTGAACATCCCAAATGCCACCGGAACCC...TGAACCCTCCTGATGAGAGTGGCCCCGGCTGCATGAGCTGCAAGTGTGTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp GACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCAGCCAGGTCACACTaGTTCCCCACCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: DHPIIYCDPICARQGPTEAARSH*FPTSTM
Trigger: CATGGTGCTGGTGGGGAACAAGTGTGACCTGGCTGC...CTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGCAGCCAGGTCACACTaGTTCCCCACCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: QDHPIIYCDPICARQGPTAARSH*FPTSTM
Trigger: CATGGTGCTGGTGGGGAACAAGTGTGACCTGGCTGC...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CTCATCAGGAGGGTTCAGCTTCCGCAGCTTGTGCTGCCGGATCTCACGCACCAAATGTCCTCAAAAGACTaGGTGTTGTTGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: LIRRVQLPQLVLPDLTHQMSSKD*VLLMAN
Trigger: GTTTGCCATCAACAACACCAAGTCTTTTGAGGACAT...TTGGTGCGTGAGATCCGGCAGCACAAGCTGCGGAAGCTGAACCCTCCTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000493230.5
ENST00000616241.4
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp CAAGACCATCCAATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGTCCTTCACCCGTTaGATCTGCTCCCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: QDHPIIYCDPICARQGPTESFTR*ICSLYW
Trigger: CCAGTACAGGGAGCAGATCAAACGGGTGAAGGACTC...TGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTATTGGATGGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTGCTTCCGTCCTTCCTTCCTCCTCCTTCCGTCTGCACCTCCATGTCCTCAAAAGACTaGGTGTTGTTGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: FLPSLLPSFLPPPSVCTSMSSKD*VLLMAN
Trigger: GTTTGCCATCAACAACACCAAGTCTTTTGAGGACAT...GGAGGTGCAGACGGAAGGAGGAGGAAGGAAGGACGGAAGCAAGGAAGGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS-3UTR CAA 90 bp ATAATTTACTGTGATCCCATCTGTGCCCGACAAGGGCCCACAGAGGCCTGGGAGATGTCCTCAAAAGACTaGGTGTTGTTGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: IIYCDPICARQGPTEAWEMSSKD*VLLMAN
Trigger: GTTTGCCATCAACAACACCAAGTCTTTTGAGGACAT...CTCCCAGGCCTCTGTGGGCCCTTGTCGGGCACAGATGGGATCACAGTAAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311189.8
ENST00000397596.6
ENST00000451590.5
ENST00000493230.5
ENST00000610977.3
ENST00000616241.4
ENST00000631404.1
ENST00000631967.1
ENST00000634098.1
CDS CCA 72 bp ACGGCAGGCCTCGGCCCCAGGGGCGACCCTTCCACCTaGGAAAGGTGGGCGCGAGCCTCCAGCAGAGACCGC +
Preference number: 6 (lower is better)
Translates to: TAGLGPRGDPST*ERWARASSRDR
Trigger: GCGGTCTCTGCTGGAGGCTCGCGCCCACCTTTCCCAGGTGGAAGGGTCGCCCCTGGGGCCGAGGCCTGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS TCA 72 bp GACGGCCCAGGCACGGAGCCGCAGGAAGCTGGCACCTaGCGCGCCTGCGCCCACCCAACTCGAGTTGGTGGC +
Preference number: 6 (lower is better)
Translates to: DGPGTEPQEAGT*RACAHPTRVGG
Trigger: GCCACCAACTCGAGTTGGGTGGGCGCAGGCGCGTCAGGTGCCAGCTTCCTGCGGCTCCGTGCCTGGGCCGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462734.2
CDS CCA 72 bp GCATCGCGACGGCCCAGGCACGGAGCCGCAGGAAGCTaGCACCTGACGCGCCTGCGCCCACCCAACTCGAGT +
Preference number: 6 (lower is better)
Translates to: ASRRPRHGAAGS*HLTRLRPPNSS
Trigger: ACTCGAGTTGGGTGGGCGCAGGCGCGTCAGGTGCCAGCTTCCTGCGGCTCCGTGCCTGGGCCGTCGCGATGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462734.2
CDS TCA 72 bp AGAGCTCGGCTCGGGGCGGACACGCATGAACGCGAGTaGGAAGCGGCGACTGGACGGCGGGCGGCAGCGTGT +
Preference number: 6 (lower is better)
Translates to: RARLGADTHERE*EAATGRRAAAC
Trigger: ACACGCTGCCGCCCGCCGTCCAGTCGCCGCTTCTCACTCGCGTTCATGCGTGTCCGCCCCGAGCCGAGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS TCA 72 bp GGTCGCAGTCAGAGCTCGGCTCGGGGCGGACACGCATaGACGCGAGTGAGAAGCGGCGACTGGACGGCGGGC +
Preference number: 6 (lower is better)
Translates to: GRSQSSARGGHA*TRVRSGDWTAG
Trigger: GCCCGCCGTCCAGTCGCCGCTTCTCACTCGCGTTCATGCGTGTCCGCCCCGAGCCGAGCTCTGACTGCGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS GCA 72 bp GTGGGAAGCGCCAGGATCGCGAGGAAACGCGACACGTaGATCGCGACGGCCCAGGCACGGAGCCGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: VGSARIARKRDT*IATAQARSRRK
Trigger: CTTCCTGCGGCTCCGTGCCTGGGCCGTCGCGATGCACGTGTCGCGTTTCCTCGCGATCCTGGCGCTTCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS GCA 72 bp CCTGCCGGGTCTTGGCCGAGGTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGTCCTGAGCCTGCCGAG +
Preference number: 6 (lower is better)
Translates to: PAGSWPRSRCRG*RSFGRGPEPAE
Trigger: CTCGGCAGGCTCAGGACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGACCTCGGCCAAGACCCGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000311189.8
ENST00000397594.6
ENST00000397596.6
ENST00000417302.6
ENST00000451590.5
ENST00000479482.1
ENST00000493230.5
ENST00000610977.3
ENST00000615062.2
ENST00000616241.4
ENST00000631404.1
ENST00000631627.1
ENST00000631967.1
ENST00000632658.1
ENST00000632849.1
ENST00000634098.1
CDS GCA 72 bp GCTGCCGGGTCTTGGCCGAGGTCTCGATGTAGGGGATaGCGTAGCTTCGGGCGAGGTCCTGAGCCTGCCGAG +
Preference number: 6 (lower is better)
Translates to: AAGSWPRSRCRG*RSFGRGPEPAE
Trigger: CTCGGCAGGCTCAGGACCTCGCCCGAAGCTACGGCATCCCCTACATCGAGACCTCGGCCAAGACCCGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462734.2
CDS CCA 72 bp GAGCCTCCAGCAGAGACCGCCTTTACCCGCCCCGCGTaGGAAGCGCCAGGATCGCGAGGAAACGCGACACGT +
Preference number: 6 (lower is better)
Translates to: EPPAETAFTRPA*EAPGSRGNATR
Trigger: ACGTGTCGCGTTTCCTCGCGATCCTGGCGCTTCCCACGCGGGGCGGGTAAAGGCGGTCTCTGCTGGAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS CCA 72 bp CACTCGGGTGCGCTCCGGCGTCCGGTGTGTGTTTCCTaGTCCTCGGGGGCGCTTCCCCCGGTGCTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: HSGALRRPVCVS*SSGALPPVLPF
Trigger: AAAAGGAAGCACCGGGGGAAGCGCCCCCGAGGACCAGGAAACACACACCGGACGCCGGAGCGCACCCGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS CAA 72 bp CCTGGTCCTCGGGGGCGCTTCCCCCGGTGCTTCCTTTaGCCGTCGGCCTCACTTCCAACCGAAGGTCAGGAC +
Preference number: 6 (lower is better)
Translates to: PGPRGRFPRCFL*PSASLPTEGQD
Trigger: GTCCTGACCTTCGGTTGGAAGTGAGGCCGACGGCAAAAGGAAGCACCGGGGGAAGCGCCCCCGAGGACCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1
CDS CAA 90 bp TGTGTGTTTCCTGGTCCTCGGGGGCGCTTCCCCCGGTGCTTCCTTTaGCCGTCGGCCTCACTTCCAACCGAAGGTCAGGACGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: CVFPGPRGRFPRCFL*PSASLPTEGQDGRP
Trigger: AGGCCTGCCGTCCTGACCTTCGGTTGGAAGTGAGGCCGACGGCAAAAGGAAGCACCGGGGGAAGCGCCCCCGAGGACCAGGAAACACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462734.2
ENST00000468682.2
ENST00000633137.1