RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HR (Homo sapiens)

Ensembl gene IDs: ENSG00000168453

Ensembl transcript IDs: ENST00000312841.9, ENST00000381418.9, ENST00000517699.2, ENST00000518461.2, ENST00000519619.1, ENST00000522016.1, ENST00000522039.1, ENST00000522759.1, ENST00000680789.1

Found 1014 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCTCAGTCCCAGGGTGGCTGGGCCTGGCGTCGGCCATGGCCACTaGCACCAAGGGCAGACAGGCGGGGCAAGGGCTCTTCTGGGCCAT +
Preference number: 1 (lower is better)
Translates to: RLSPRVAGPGVGHGH*HQGQTGGARALLGH
Trigger: ATGGCCCAGAAGAGCCCTTGCCCCGCCTGTCTGCCCTTGGTGGCAGTGGCCATGGCCGACGCCAGGCCCAGCCACCCTGGGACTGAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR GCA 90 bp GCTCAGGCCAGGAGAAGCCCTCCCAGAATGTTGTGCTGCCCAGGCTaGTGGGCTGGGGAGGTCCGAGGGGGCTCAGCGCCTGCACCTGGC +
Preference number: 1 (lower is better)
Translates to: AQARRSPPRMLCCPG*WAGEVRGGSAPAPG
Trigger: GCCAGGTGCAGGCGCTGAGCCCCCTCGGACCTCCCCAGCCCAGCAGCCTGGGCAGCACAACATTCTGGGAGGGCTTCTCCTGGCCTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR GCA 90 bp GGGGCGGACTGGAGCTTGCTGGGTGGAGTAGGGCTCGGGAGTCTCTaGACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCCTT +
Preference number: 1 (lower is better)
Translates to: GADWSLLGGVGLGSL*TGRSPRGCAPGLCL
Trigger: AAGGCAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CCA 90 bp GGTCAGGGTAGACGGGAGAGATGGGGCGGACTGGAGCTTGCTGGGTaGAGTAGGGCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGG +
Preference number: 1 (lower is better)
Translates to: GQGRRERWGGLELAG*SRARESLHREVTSW
Trigger: CCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CCA 90 bp GGGTGGAGTAGGGCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTaGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGA +
Preference number: 1 (lower is better)
Translates to: GWSRARESLHREVTS*LCPRTLPCLLLHSG
Trigger: TCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGCCCTACTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CCA 90 bp CGCAGACCCGGGCCAGCTCGAAGCCCCGGCCCCAGGGCTTTCTCCTaGATCTTCCGTTCCACCACCTGTGCGATAATGCTGTCCAGGATG +
Preference number: 1 (lower is better)
Translates to: RRPGPARSPGPRAFS*IFRSTTCAIMLSRM
Trigger: CATCCTGGACAGCATTATCGCACAGGTGGTGGAACGGAAGATCCAGGAGAAAGCCCTGGGGCCGGGGCTTCGAGCTGGCCCGGGTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR TCA 90 bp GTGACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTaGTGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: VTSPMPLPPPSLSSS*CHPLLTLPRSFGRR
Trigger: CCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CCA 90 bp CTTCTGGATCTCCAGGTCAGGGTAGACGGGAGAGATGGGGCGGACTaGAGCTTGCTGGGTGGAGTAGGGCTCGGGAGTCTCTGCACAGGG +
Preference number: 1 (lower is better)
Translates to: LLDLQVRVDGRDGAD*SLLGGVGLGSLCTG
Trigger: CCCTGTGCAGAGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACCCTGACCTGGAGATCCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CCA 90 bp GGCAGGGCCGGAGTGACGGGGGCGAAGGCCATGTGTATTCGCTCATaGCCCAAGCAGAGTTTGACCGCGGTAGAAGCCAGCAGTTCGCAG +
Preference number: 1 (lower is better)
Translates to: GRAGVTGAKAMCIRS*PKQSLTAVEASSSQ
Trigger: CTGCGAACTGCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATACACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR CCA 90 bp CTGGGCCATACTTCTGGATCTCCAGGTCAGGGTAGACGGGAGAGATaGGGCGGACTGGAGCTTGCTGGGTGGAGTAGGGCTCGGGAGTCT +
Preference number: 1 (lower is better)
Translates to: LGHTSGSPGQGRRER*GGLELAGWSRARES
Trigger: AGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACCCTGACCTGGAGATCCAGAAGTATGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR GCA 90 bp CCCCGGCCCCAGGGCTTTCTCCTGGATCTTCCGTTCCACCACCTGTaGGATAATGCTGTCCAGGATGTTGGTGATGCGGTCATCACTGGG +
Preference number: 1 (lower is better)
Translates to: PRPQGFLLDLPFHHL*DNAVQDVGDAVITG
Trigger: CCCAGTGATGACCGCATCACCAACATCCTGGACAGCATTATCGCACAGGTGGTGGAACGGAAGATCCAGGAGAAAGCCCTGGGGCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCAGGGTGGCTGGGCCTaGCGTCGGCCATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRQGGWA*RRPWPL
Trigger: CAGTGGCCATGGCCGACGCCAGGCCCAGCCACCCTG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCAGTCCCAGGGTGGCTaGGCCTGGCGTCGGCCATGG +
Preference number: 2 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRQSQGG*AWRRPW
Trigger: CCATGGCCGACGCCAGGCCCAGCCACCCTGGGACTG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCAGTCCCAGGGTGGCTaGGCCTGGCGTCGGCCATGG +
Preference number: 2 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCQSQGG*AWRRPW
Trigger: CCATGGCCGACGCCAGGCCCAGCCACCCTGGGACTG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCGGGAAGGGGCTGAGTaGCATCGCCCATGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRREGAE*HRPCRS
Trigger: GGAGCGGCATGGGCGATGTCACTCAGCCCCTTCCCG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGGACCGGGAAGGGGCTaGGTGACATCGCCCATGCCG +
Preference number: 2 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGGPGRG*VTSPMP
Trigger: CGGCATGGGCGATGTCACTCAGCCCCTTCCCGGTCC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGGACCGGGAAGGGGCTaGGTGACATCGCCCATGCCG +
Preference number: 2 (lower is better)
Translates to: ARESLHREVTSWLCPRTLGPGRG*VTSPMP
Trigger: CGGCATGGGCGATGTCACTCAGCCCCTTCCCGGTCC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGTCCCCCTCCCTCCCTaGACCATGTGGCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGVPLPP*TMWPAG
Trigger: CCCTGCAGGCCACATGGTCCAGGGAGGGAGGGGGAC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGCGGGCCTGGTACCATaGAAAGGGGCACAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCAGLVP*KGAQGG
Trigger: CCCACCCTGTGCCCCTTTTCATGGTACCAGGCCCGC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp TGGGCGAAGCTCAGGCCAGGAGAAGCCCTCCCAGAATGTTGTGCTGCCCAGGCTTGGGCAGGGCCGGAGTaGCGGGGGCGAAGGCCATGT +
Preference number: 2 (lower is better)
Translates to: WAKLRPGEALPECCAAQAWAGPE*RGRRPC
Trigger: ACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCA...AGCCTGGGCAGCACAACATTCTGGGAGGGCTTCTCCTGGCCTGAGCTTCGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCTGGACCATGTGGCCTaGAGGGGCAGGGCCAACCAC +
Preference number: 2 (lower is better)
Translates to: ARESLHREVTSWLCPRTLLDHVA*RGRANH
Trigger: GTGGTTGGCCCTGCCCCTGCAGGCCACATGGTCCAG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCTGGACCATGTGGCCTaGAGGGGCAGGGCCAACCAC +
Preference number: 2 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGLDHVA*RGRANH
Trigger: GTGGTTGGCCCTGCCCCTGCAGGCCACATGGTCCAG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGAGCGCCATCCCCTGCTaGAGTTGTGCCTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGSAIPC*SCAWAE
Trigger: CTCAGCCCAGGCACAACTTCAGCAGGGGATGGCGCT...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCAGCGCCATCCCCTGCTaGAGTTGTGCCTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCSAIPC*SCAWAE
Trigger: CTCAGCCCAGGCACAACTTCAGCAGGGGATGGCGCT...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTGAGGGGTCGGCTGTCTaGAGCAGTCAGGCTCAGTCC +
Preference number: 2 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGREGSAV*SSQAQS
Trigger: GGACTGAGCCTGACTGCTTCAGACAGCCGACCCCTC...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGGGCTGTTTGTCTCCTaGGTCTCGGAGGAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPGLFVS*VSEEWG
Trigger: TCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCCAAAGTCTCCTCAGTaGGAGGCAAGGCCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCPKSPQ*EARPQA
Trigger: GGCCTGGGGCCTTGCCTCCCACTGAGGAGACTTTGG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGAACAGAGTGCCCTaGTTGTGCCCAGAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCGNRVP*LCPEWC
Trigger: GCACCACTCTGGGCACAAGCAGGGCACTCTGTTCCC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATGGTGTCCTGTCCCTTaGGCCCCAGCTCCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: APGLCLACSCTQEHLWGTWCPVP*APAPGC
Trigger: GCAGCCCGGAGCTGGGGCCCAAGGGACAGGACACCA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCTGGAGCTTGCTGGGTaGAGTAGGGCTCGGGAGTCT +
Preference number: 2 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCLELAG*SRARES
Trigger: AGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CAA 90 bp GATCTCCAGGTCAGGGTAGACGGGAGAGATGGGGCGGACTGGAGCTaGCTGGGTGGAGTAGGGCTCGGGAGTCTCTGCACAGGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: DLQVRVDGRDGADWS*LGGVGLGSLCTGRS
Trigger: TGACCTCCCTGTGCAGAGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACCCTGACCTGGAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGGGAACAGAGTGCCCTaGTTGTGCCCAGAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLGNRVP*LCPEWC
Trigger: GCACCACTCTGGGCACAAGCAGGGCACTCTGTTCCC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGTTGGAGGAAGTCAATTaGCCCCAGTGCGGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: ARESLHREVTSWLCPRTLLEEVN*PQCGPG
Trigger: ACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAA...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCTGGACCATGTGGCCTaGAGGGGCAGGGCCAACCAC +
Preference number: 2 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLLDHVA*RGRANH
Trigger: GTGGTTGGCCCTGCCCCTGCAGGCCACATGGTCCAG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp TCCCCCAAAGCTCGGTGCAGCAGGAGGACAGAGCCCTCGTCTGACTTTGGGCGACAAGGCTGGGGCTCCTaGAGCCACAGCAAAGCCCCT +
Preference number: 2 (lower is better)
Translates to: SPKARCSRRTEPSSDFGRQGWGS*SHSKAP
Trigger: AGGGGCTTTGCTGTGGCTGCAGGAGCCCCAGCCTTG...TCGCCCAAAGTCAGACGAGGGCTCTGTCCTCCTGCTGCACCGAGCTTTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR GCA 90 bp TCCCCCAAAGCTCGGTGCAGCAGGAGGACAGAGCCCTCGTCTGACTTTGGGCGACCCAGAATGTTGTGCTaGCCAGGCTGCTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SPKARCSRRTEPSSDFGRPRMLC*PGCWAG
Trigger: CCCAGCCCAGCAGCCTGGGCAGCACAACATTCTGGG...TCGCCCAAAGTCAGACGAGGGCTCTGTCCTCCTGCTGCACCGAGCTTTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCCTGGGCTGAGCACCTaGTCTACCTGTCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLPGLST*STCPHP
Trigger: GGGGTGGGGACAGGTAGACCAGGTGCTCAGCCCAGG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCCTGGGCTGAGCACCTaGTCTACCTGTCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGPGLST*STCPHP
Trigger: GGGGTGGGGACAGGTAGACCAGGTGCTCAGCCCAGG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGGGCTGTTTGTCTCCTaGGTCTCGGAGGAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLGLFVS*VSEEWG
Trigger: TCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CAA 90 bp GGTGTCCTGTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTaGTCTCTAAGGCAGATTTCCATGTCCCCCTCCCTCCCTGGACCA +
Preference number: 2 (lower is better)
Translates to: GVLSLGPQLRAALLH*SLRQISMSPSLPGP
Trigger: TGGTCCAGGGAGGGAGGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGACAGGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGTGGTGCTTGTGGGGTTaGCCAGAAATCCCCAAGTCC +
Preference number: 2 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGWCLWG*PEIPKS
Trigger: GGACTTGGGGATTTCTGGTCAACCCCACAAGCACCA...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGGGAGGGGAACAGAGTaGCCTGCTTGTGCCCAGAGT +
Preference number: 2 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPGRGTE*PACAQS
Trigger: ACTCTGGGCACAAGCAGGGCACTCTGTTCCCCTCCC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGGACTCTGCCTTGCCTaGTCTTGCACTCAGGAGCAT +
Preference number: 2 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGGLCLA*SCTQEH
Trigger: ATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGACTCTGCCTTGCCTaGTCTTGCACTCAGGAGCAT +
Preference number: 2 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCGLCLA*SCTQEH
Trigger: ATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGTGTGCCCCAGGACTCTaGCTTGCCTGCTCTTGCACT +
Preference number: 2 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLCAPGL*LACSCT
Trigger: AGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACA...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGAGGAGTGGGGATTaGAGGAAGTCAATTGCCCCC +
Preference number: 2 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLRRSGD*RKSIAP
Trigger: GGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGAGGAGGGCAGAAGGTTaGAGGCCCCTTGTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: ARESLHREVTSWLCPRTLRRAEG*RPLVQH
Trigger: ATGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCT...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGGGAACAGAGTGCCCTaGTTGTGCCCAGAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADGNRVP*LCPEWC
Trigger: GCACCACTCTGGGCACAAGCAGGGCACTCTGTTCCC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCTTGTTCAGCATGCCTaGAGTGAGCCCAGTGAGGAT +
Preference number: 2 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRLVQHA*SEPSED
Trigger: ATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGCCCCAGCTCCGGGCTaGCCTACTCCATTTGTCTCT +
Preference number: 2 (lower is better)
Translates to: APGLCLACSCTQEHLWGTAPAPG*PTPFVS
Trigger: AGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTTGGGTCTCGGAGGAGTaGGGATTGGAGGAAGTCAAT +
Preference number: 2 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRWVSEE*GLEEVN
Trigger: ATTGACTTCCTCCAATCCCCACTCCTCCGAGACCCA...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGGGCTGTTTGTCTCCTaGGTCTCGGAGGAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRGLFVS*VSEEWG
Trigger: TCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGAGGAGGGCAGAAGGTTaGAGGCCCCTTGTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLRRAEG*RPLVQH
Trigger: ATGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTAGAGTGCCCTGCTTGTaGCCAGAGTGGTGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLRVPCL*PEWCLW
Trigger: CCACAAGCACCACTCTGGGCACAAGCAGGGCACTCT...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTTGGAGGAAGTCAATTaGCCCCAGTGCGGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLLEEVN*PQCGPG
Trigger: ACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCGGAGGAGTGGGGATTaGAGGAAGTCAATTGCCCCC +
Preference number: 2 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLRRSGD*RKSIAP
Trigger: GGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CAA 90 bp ACGGGGGCGAAGGCCATGTGTATTCGCTCATGGCCCAAGCAGAGTTaGACCGCGGTAGAAGCCAGCAGTTCGCAGAGAGAAGGACAAGGC +
Preference number: 2 (lower is better)
Translates to: TGAKAMCIRSWPKQS*TAVEASSSQREGQG
Trigger: GCCTTGTCCTTCTCTCTGCGAACTGCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATACACATGGCCTTCGCCCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR TCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGAAGTTGTGCCTGGGCTaGGCACCTGGTCTACCTGTC +
Preference number: 2 (lower is better)
Translates to: VQHACSEPSEDAVVETELKLCLG*APGLPV
Trigger: GACAGGTAGACCAGGTGCTCAGCCCAGGCACAACTT...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTGCTTGTGGGGTTaGCCAGAAATCCCCAAGTCC +
Preference number: 2 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRWCLWG*PEIPKS
Trigger: GGACTTGGGGATTTCTGGTCAACCCCACAAGCACCA...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTTGGAGGAAGTCAATTaGCCCCAGTGCGGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: VQHACSEPSEDAVVETELLEEVN*PQCGPG
Trigger: ACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp TCAGGCCAGGAGAAGCCCTCCCAGAATGTTGTGCTGCCCAGGCTGCTGGGCTGGCCCTGCAATGTCCTTTaGATCCCTGACACCAACACA +
Preference number: 2 (lower is better)
Translates to: SGQEKPSQNVVLPRLLGWPCNVL*IPDTNT
Trigger: TGTGTTGGTGTCAGGGATCCAAAGGACATTGCAGGG...CCAGCCCAGCAGCCTGGGCAGCACAACATTCTGGGAGGGCTTCTCCTGGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR TCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAAAGTTGTGCCTGGGCTaGGCACCTGGTCTACCTGTC +
Preference number: 2 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGKLCLG*APGLPV
Trigger: GACAGGTAGACCAGGTGCTCAGCCCAGGCACAACTT...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCAGAGTGCCCTGCTTGTaGCCAGAGTGGTGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: QLRAALLHLSLRQISMSPRVPCL*PEWCLW
Trigger: CCACAAGCACCACTCTGGGCACAAGCAGGGCACTCT...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGCGCCACCAGGAGGCTaGGGGCGTGGAGCGGGGACA +
Preference number: 2 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRAPPGG*GRGAGT
Trigger: TGTCCCCGCTCCACGCCCGCAGCCTCCTGGTGGCGC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTTGTTTAAGCCAGAATaGTTCCCAAGTTTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCLFKPE*FPSFPK
Trigger: CTTGGGGAAACTTGGGAATCATTCTGGCTTAAACAA...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTGGGTCTCGGAGGAGTaGGGATTGGAGGAAGTCAAT +
Preference number: 2 (lower is better)
Translates to: VQHACSEPSEDAVVETELWVSEE*GLEEVN
Trigger: ATTGACTTCCTCCAATCCCCACTCCTCCGAGACCCA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGTCCCCCTCCCTCCCTaGACCATGTGGCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRVPLPP*TMWPAG
Trigger: CCCTGCAGGCCACATGGTCCAGGGAGGGAGGGGGAC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGCCTGGCGTCGGCCATaGCCACTGCCACCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGAWRRP*PLPPRA
Trigger: TGCCCTTGGTGGCAGTGGCCATGGCCGACGCCAGGC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGGCTCAGTCCCAGGGTaGCTGGGCCTGGCGTCGGCC +
Preference number: 2 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCGSVPG*LGLASA
Trigger: GGCCGACGCCAGGCCCAGCCACCCTGGGACTGAGCC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATTGTTTAAGCCAGAATaGTTCCCAAGTTTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: APGLCLACSCTQEHLWGTLFKPE*FPSFPK
Trigger: CTTGGGGAAACTTGGGAATCATTCTGGCTTAAACAA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCCTGGGCTGAGCACCTaGTCTACCTGTCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGPGLST*STCPHP
Trigger: GGGGTGGGGACAGGTAGACCAGGTGCTCAGCCCAGG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGTCCCCCTCCCTCCCTaGACCATGTGGCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEVPLPP*TMWPAG
Trigger: CCCTGCAGGCCACATGGTCCAGGGAGGGAGGGGGAC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAAGGGAGGTCACCTCGTaGCTGTGCCCCAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRREVTS*LCPRTL
Trigger: CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCT...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCCTGGCGTCGGCCATaGCCACTGCCACCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEAWRRP*PLPPRA
Trigger: TGCCCTTGGTGGCAGTGGCCATGGCCGACGCCAGGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCAGGGTGGCTGGGCCTaGCGTCGGCCATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCQGGWA*RRPWPL
Trigger: CAGTGGCCATGGCCGACGCCAGGCCCAGCCACCCTG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp ACCACCTGTGCGATAATGCTGTCCAGGATGTTGGTGATGCGGTCATCACTGGGCATGTGTATTCGCTCATaGCCCAAGCAGAGTTTGACC +
Preference number: 2 (lower is better)
Translates to: TTCAIMLSRMLVMRSSLGMCIRS*PKQSLT
Trigger: GGTCAAACTCTGCTTGGGCCATGAGCGAATACACAT...GCCCAGTGATGACCGCATCACCAACATCCTGGACAGCATTATCGCACAGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR TCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGCGGGCCTGGTACCATaGAAAGGGGCACAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCAGLVP*KGAQGG
Trigger: CCCACCCTGTGCCCCTTTTCATGGTACCAGGCCCGC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGGTAGACGGGAGAGATaGGGCGGACTGGAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGGRRER*GGLELA
Trigger: AGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGATGGTGCTTGTGGGGTTaGCCAGAAATCCCCAAGTCC +
Preference number: 2 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRWCLWG*PEIPKS
Trigger: GGACTTGGGGATTTCTGGTCAACCCCACAAGCACCA...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGAGGGGTCGGCTGTCTaGAGCAGTCAGGCTCAGTCC +
Preference number: 2 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCEGSAV*SSQAQS
Trigger: GGACTGAGCCTGACTGCTTCAGACAGCCGACCCCTC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACTGGAGCTTGCTGGGTaGAGTAGGGCTCGGGAGTCT +
Preference number: 2 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKELELAG*SRARES
Trigger: AGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGGGAGGGGAACAGAGTaGCCTGCTTGTGCCCAGAGT +
Preference number: 2 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCGRGTE*PACAQS
Trigger: ACTCTGGGCACAAGCAGGGCACTCTGTTCCCCTCCC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACTTGTTCAGCATGCCTaGAGTGAGCCCAGTGAGGAT +
Preference number: 2 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRLVQHA*SEPSED
Trigger: ATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGCCCCAGCTCCGGGCTaGCCTACTCCATTTGTCTCT +
Preference number: 2 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCAPAPG*PTPFVS
Trigger: AGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAAGTTGTGCCTGGGCTaGGCACCTGGTCTACCTGTC +
Preference number: 2 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCKLCLG*APGLPV
Trigger: GACAGGTAGACCAGGTGCTCAGCCCAGGCACAACTT...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAATGCCTTGCCTGCTCTTaGACTCAGGAGCATCTTTGG +
Preference number: 2 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKECLACS*TQEHLW
Trigger: CCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCA...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGAGGGCAGAAGGTTaGAGGCCCCTTGTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCRRAEG*RPLVQH
Trigger: ATGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCT...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR TCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGATTGTTTAAGCCAGAATaGTTCCCAAGTTTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRLFKPE*FPSFPK
Trigger: CTTGGGGAAACTTGGGAATCATTCTGGCTTAAACAA...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR GCA 72 bp CCCAGGGTGGCTGGGCCTGGCGTCGGCCATGGCCACTaGCACCAAGGGCAGACAGGCGGGGCAAGGGCTCTT +
Preference number: 3 (lower is better)
Translates to: PRVAGPGVGHGH*HQGQTGGARAL
Trigger: AAGAGCCCTTGCCCCGCCTGTCTGCCCTTGGTGGCAGTGGCCATGGCCGACGCCAGGCCCAGCCACCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR TCA 72 bp CGGGCGTGGAGCGGGGACAAGGAGGGGTCGGCTGTCTaGAGCAGTCAGGCTCAGTCCCAGGGTGGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: RAWSGDKEGSAV*SSQAQSQGGWA
Trigger: GGCCCAGCCACCCTGGGACTGAGCCTGACTGCTTCAGACAGCCGACCCCTCCTTGTCCCCGCTCCACGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGGGGCGGACTGGAGCTaGCTGGGTGGAGTAGGGCTC +
Preference number: 3 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLGADWS*LGGVGL
Trigger: GAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGTGGTGTCCTGTCCCTaGGGCCCCAGCTCCGGGCTG +
Preference number: 3 (lower is better)
Translates to: APGLCLACSCTQEHLWGTVVSCP*GPSSGL
Trigger: CAGCCCGGAGCTGGGGCCCAAGGGACAGGACACCAC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCCCCAGGACTCTGCCTaGCCTGCTCTTGCACTCAGG +
Preference number: 3 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRPQDSA*PALALR
Trigger: CCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CCA 72 bp AGGGCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTaGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTG +
Preference number: 3 (lower is better)
Translates to: RARESLHREVTS*LCPRTLPCLLL
Trigger: CAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CCA 72 bp CTCCAGGTCAGGGTAGACGGGAGAGATGGGGCGGACTaGAGCTTGCTGGGTGGAGTAGGGCTCGGGAGTCTC +
Preference number: 3 (lower is better)
Translates to: LQVRVDGRDGAD*SLLGGVGLGSL
Trigger: GAGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACCCTGACCTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCCAAGGAAGGGCTGTTaGTCTCCTGGGTCTCGGAGG +
Preference number: 3 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCPRKGC*SPGSRR
Trigger: CCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTAAGGTTGGAGGCCCCTaGTTCAGCATGCCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRKVGGP*FSMPAV
Trigger: CACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTGTGGTGCTTGTGGGGTaGACCAGAAATCCCCAAGTC +
Preference number: 3 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRVVLVG*TRNPQV
Trigger: GACTTGGGGATTTCTGGTCAACCCCACAAGCACCAC...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGAACAGAGTGCCCTGCTaGTGCCCAGAGTGGTGCTTG +
Preference number: 3 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLNRVPC*CPEWCL
Trigger: CAAGCACCACTCTGGGCACAAGCAGGGCACTCTGTT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCACTCCCCAGATCTTTaGGCAGGAGGGCAGAAGGTT +
Preference number: 3 (lower is better)
Translates to: ARESLHREVTSWLCPRTLHSPDL*AGGQKV
Trigger: AACCTTCTGCCCTCCTGCCAAAAGATCTGGGGAGTG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCACTCCCCAGATCTTTaGGCAGGAGGGCAGAAGGTT +
Preference number: 3 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRHSPDL*AGGQKV
Trigger: AACCTTCTGCCCTCCTGCCAAAAGATCTGGGGAGTG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR TCA 72 bp CAAAGCTCGGTGCAGCAGGAGGACAGAGCCCTCGTCTaGCTTTGGGCGAAGCTCAGGCCAGGAGAAGCCCTC +
Preference number: 3 (lower is better)
Translates to: QSSVQQEDRALV*LWAKLRPGEAL
Trigger: GAGGGCTTCTCCTGGCCTGAGCTTCGCCCAAAGTCAGACGAGGGCTCTGTCCTCCTGCTGCACCGAGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAATTGGAGGAAGTCAATaGCCCCCAGTGCGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: APGLCLACSCTQEHLWGTIGGSQ*PPVRAW
Trigger: CCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAAT...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCCAAGGAAGGGCTGTTaGTCTCCTGGGTCTCGGAGG +
Preference number: 3 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRPRKGC*SPGSRR
Trigger: CCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACAGGAGGGCAGAAGGTaGGAGGCCCCTTGTTCAGCA +
Preference number: 3 (lower is better)
Translates to: APGLCLACSCTQEHLWGTQEGRR*EAPCSA
Trigger: TGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCTG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CCA 72 bp ACTTCTGGATCTCCAGGTCAGGGTAGACGGGAGAGATaGGGCGGACTGGAGCTTGCTGGGTGGAGTAGGGCT +
Preference number: 3 (lower is better)
Translates to: TSGSPGQGRRER*GGLELAGWSRA
Trigger: AGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACCCTGACCTGGAGATCCAGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CCA 72 bp GGAGTGACGGGGGCGAAGGCCATGTGTATTCGCTCATaGCCCAAGCAGAGTTTGACCGCGGTAGAAGCCAGC +
Preference number: 3 (lower is better)
Translates to: GVTGAKAMCIRS*PKQSLTAVEAS
Trigger: GCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATACACATGGCCTTCGCCCCCGTCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR CAA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATAACAGAGTGCCCTGCTaGTGCCCAGAGTGGTGCTTG +
Preference number: 3 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADNRVPC*CPEWCL
Trigger: CAAGCACCACTCTGGGCACAAGCAGGGCACTCTGTT...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTAAGGTTGGAGGCCCCTaGTTCAGCATGCCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLKVGGP*FSMPAV
Trigger: CACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGTGGTGCTTGTGGGGTaGACCAGAAATCCCCAAGTC +
Preference number: 3 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLVVLVG*TRNPQV
Trigger: GACTTGGGGATTTCTGGTCAACCCCACAAGCACCAC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR GCA 72 bp CAGGGCTTTCTCCTGGATCTTCCGTTCCACCACCTGTaGGATAATGCTGTCCAGGATGTTGGTGATGCGGTC +
Preference number: 3 (lower is better)
Translates to: QGFLLDLPFHHL*DNAVQDVGDAV
Trigger: GACCGCATCACCAACATCCTGGACAGCATTATCGCACAGGTGGTGGAACGGAAGATCCAGGAGAAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGTGGTGTCCTGTCCCTaGGGCCCCAGCTCCGGGCTG +
Preference number: 3 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEVVSCP*GPSSGL
Trigger: CAGCCCGGAGCTGGGGCCCAAGGGACAGGACACCAC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACCCCAGGACTCTGCCTaGCCTGCTCTTGCACTCAGG +
Preference number: 3 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRPQDSA*PALALR
Trigger: CCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGGGGCGGACTGGAGCTaGCTGGGTGGAGTAGGGCTC +
Preference number: 3 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEGADWS*LGGVGL
Trigger: GAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACCAAGGAAGGGCTGTTaGTCTCCTGGGTCTCGGAGG +
Preference number: 3 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRPRKGC*SPGSRR
Trigger: CCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACAGGAGGGCAGAAGGTaGGAGGCCCCTTGTTCAGCA +
Preference number: 3 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEQEGRR*EAPCSA
Trigger: TGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCTG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR TCA 72 bp AGTGAGCAGCAGGAGGAGGTGTTGTTTAAGCCAGAATaGTTCCCAAGTTTCCCCAAGGAAGGGCTGTTTGTC +
Preference number: 3 (lower is better)
Translates to: SEQQEEVLFKPE*FPSFPKEGLFV
Trigger: GACAAACAGCCCTTCCTTGGGGAAACTTGGGAATCATTCTGGCTTAAACAACACCTCCTCCTGCTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGTGGTGCTTGTGGGGTaGACCAGAAATCCCCAAGTC +
Preference number: 3 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGVVLVG*TRNPQV
Trigger: GACTTGGGGATTTCTGGTCAACCCCACAAGCACCAC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAAGGTTGGAGGCCCCTaGTTCAGCATGCCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCKVGGP*FSMPAV
Trigger: CACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGCTGCCCTACTCCATTaGTCTCTAAGGCAGATTTCC +
Preference number: 3 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRAALLH*SLRQIS
Trigger: GGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACTGCCTTGCCTGCTCTaGCACTCAGGAGCATCTTTG +
Preference number: 3 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKELPCLL*HSGASL
Trigger: CAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCACTCCCCAGATCTTTaGGCAGGAGGGCAGAAGGTT +
Preference number: 3 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCHSPDL*AGGQKV
Trigger: AACCTTCTGCCCTCCTGCCAAAAGATCTGGGGAGTG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGCTGCCCTACTCCATTaGTCTCTAAGGCAGATTTCC +
Preference number: 3 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGAALLH*SLRQIS
Trigger: GGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCTGCCCTACTCCATTaGTCTCTAAGGCAGATTTCC +
Preference number: 3 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEAALLH*SLRQIS
Trigger: GGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCAGAGAGAAGGACAAGGCAGGGGCCCTCGGCCAGCACGGTCCTCTGCTGGGGTGCAGGCCCAGGCCCTTaGGCAGACCCGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AERRTRQGPSASTVLCWGAGPGP*ADPGQL
Trigger: GAGCTGGCCCGGGTCTGCGCAAGGGCCTGGGCCTGC...ACCCCAGCAGAGGACCGTGCTGGCCGAGGGCCCCTGCCTTGTCCTTCTCTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGCGCCACCAGGAGGCTaGGGGCGTGGAGCGGGGACA +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPAPPGG*GRGAGT
Trigger: TGTCCCCGCTCCACGCCCGCAGCCTCCTGGTGGCGC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCCTGGGCAAGCACAGTaGCCCCCGGGCGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGPGQAQ*PPGGAA
Trigger: GGCTGCTCCGCCCGGGGGGCACTGTGCTTGCCCAGG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680789.1
CDS-3UTR CCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGGGGCCACAGCGAGGTaGGCACGCTGGCCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPGATAR*ARWPAE
Trigger: TTCTGCGGGCCAGCGTGCCCACCTCGCTGTGGCCCC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCCCAGGCTGCTGGGCTaGGGAGGTCCGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGPRLLG*GGPRGL
Trigger: GAGCCCCCTCGGACCTCCCCAGCCCAGCAGCCTGGG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGCTCAGTCCCAGGGTaGCTGGGCCTGGCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCGSVPG*LGLASA
Trigger: GGCCGACGCCAGGCCCAGCCACCCTGGGACTGAGCC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTTGGGCAGGGCCGGAGTaGCGGGGGCGAAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRWAGPE*RGRRPC
Trigger: ACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCA...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGCCGAGGCCGTAGGTTaGGCCATGGGACGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPAEAVG*AMGRRD
Trigger: GTCTCGGCGTCCCATGGCGCAACCTACGGCCTCGGC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGCCCGCCCAGTGCCTaGCACACGACCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCGPPSA*HTTTGH
Trigger: GTGGCCTGTGGTCGTGTGGCAGGCACTGGGCGGGCC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGCAGGCCCAGGCCCTTaGGCAGACCCGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLAGPGP*ADPGQL
Trigger: GAGCTGGCCCGGGTCTGCGCAAGGGCCTGGGCCTGC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGCGCCACCAGGAGGCTaGGGGCGTGGAGCGGGGACA +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLAPPGG*GRGAGT
Trigger: TGTCCCCGCTCCACGCCCGCAGCCTCCTGGTGGCGC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGCGCCGCCGCAGCCCTaGATCCAGGTAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGAPPQP*IQVAAA
Trigger: GGCAGCTGCTACCTGGATGCAGGGCTGCGGCGGCGC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGGTGGGGGCCGATCCTaGGACCCAGGAGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPGGGRS*DPGERH
Trigger: GTGCCTCTCTCCTGGGTCCCAGGATCGGCCCCCACC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCGGAGATGGCCGAGTTaGGGGAAAGGCCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPRRWPS*GKGRGA
Trigger: GGCCCCTCGGCCTTTCCCCCAACTCGGCCATCTCCG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTGATGCGGTCATCACTGGGCAGGGCCGGAGTGACGGGGGCGAAGGCCATGTGTCGCCGAGGGCAAGGCTaGGGCTCCTGCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: VMRSSLGRAGVTGAKAMCRRGQG*GSCSHS
Trigger: GCTGTGGCTGCAGGAGCCCCAGCCTTGCCCTCGGCG...ACACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCAGTGATGACCGCATCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGAGCTGGGGCTCCAGTaGACGCAGGGCAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCELGLQ*TQGKAR
Trigger: CCGGGCCTTGCCCTGCGTCCACTGGAGCCCCAGCTC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCAAGCGGCGGATGCGCTaGGCGTCCTGTGCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPKRRMR*ASCARN
Trigger: GTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTT...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCAGGGTGGCTGGGCCTaGCGTCGGCCATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCQGGWA*RRPWPL
Trigger: CAGTGGCCATGGCCGACGCCAGGCCCAGCCACCCTG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTAGGCCCTGCACCTGGTaGGGAGCCCCTGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRRPCTW*GAPAGT
Trigger: GGTGCCTGCAGGGGCTCCCCACCAGGTGCAGGGCCT...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGAGGCCCTGCACCTGGTaGGGAGCCCCTGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGRPCTW*GAPAGT
Trigger: GGTGCCTGCAGGGGCTCCCCACCAGGTGCAGGGCCT...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGACCAGGCCCTGCACCTaGTGGGGAGCCCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGTRPCT*WGAPAG
Trigger: GCCTGCAGGGGCTCCCCACCAGGTGCAGGGCCTGGT...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGAGCAGCCCCGCTGGGTaGCAGGCGGCTCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLSSPAG*QAAQER
Trigger: CCTCTCCTGAGCCGCCTGTCACCCAGCGGGGCTGCT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGACCTCGGGGCTGCCTaGCCTTTTGAGGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGDLGAA*PFEGPE
Trigger: CTCCGGGCCCTCAAAAGGGCAGGCAGCCCCGAGGTC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGAGGGAACAGGCAGCGTaGCCGGCCTCCTGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLREQAA*PASCVH
Trigger: GTGCACGCAGGAGGCCGGGCACGCTGCCTGTTCCCT...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGGAGAAAGCGGCGGATaGGCTGGGCGTCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGGESGG*AGRPVP
Trigger: GGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGAGAAAGCGGCGGATaGGCTGGGCGTCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCGESGG*AGRPVP
Trigger: GGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTGGCCGCACCAGCTTCTaGGCCGAGGCCGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRGRTSF*AEAVGC
Trigger: GCAACCTACGGCCTCGGCCCAGAAGCTGGTGCGGCC...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGAAGCTCAGGCCAGGAGAAGCCCTCCCAGAATGTTGTGCTGCCCAGGCTGCTGCCCAGGCTGCTGGGCTaGGGAGGTCCGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RSSGQEKPSQNVVLPRLLPRLLG*GGPRGL
Trigger: GAGCCCCCTCGGACCTCCCCAGCCCAGCAGCCTGGG...CAGCAGCCTGGGCAGCACAACATTCTGGGAGGGCTTCTCCTGGCCTGAGCTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCCTCCCTGGACCATGTaGCCTGCAGGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLPPWTM*PAGAGP
Trigger: TGGCCCTGCCCCTGCAGGCCACATGGTCCAGGGAGG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGTCCCCCAAACCACTaGGCAGGTGCTTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCGPPNH*AGAWRG
Trigger: GCCTCGCCAAGCACCTGCTCAGTGGTTTGGGGGACC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGAGGGGTCGGCTGTCTaGAGCAGTCAGGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPEGSAV*SSQAQS
Trigger: GGACTGAGCCTGACTGCTTCAGACAGCCGACCCCTC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCACAGCGGCCCATGGTaGAGTCCATCTCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCHSGPW*SPSRGG
Trigger: CCCGCCTCGAGATGGACTGCACCATGGGCCGCTGTG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCAGCGGGCAAGGATTCTaGTGCCGGCCAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPSGQGF*CRPAPI
Trigger: GATGGGAGCTGGCCGGCAGCAGAATCCTTGCCCGCT...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCTGCTCCTGAAAGCCTaGTTTCTCCCTGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPLLLKA*FLPGPP
Trigger: GGGCGGGCCAGGGAGAAAGCAGGCTTTCAGGAGCAG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGAGGGAACAGGCAGCGTaGCCGGCCTCCTGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLREQAA*PASCVH
Trigger: GTGCACGCAGGAGGCCGGGCACGCTGCCTGTTCCCT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGCAGGCCCAGGCCCTTaGGCAGACCCGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLAGPGP*ADPGQL
Trigger: GAGCTGGCCCGGGTCTGCGCAAGGGCCTGGGCCTGC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGTCGGCCATGGCCACTaGCACCAAGGGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCVGHGH*HQGQTG
Trigger: GCCTGTCTGCCCTTGGTGGCAGTGGCCATGGCCGAC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGAGGCTCCAGGGCGCCTaGCCCGGCCGGGCACACCAT +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRRLQGA*PGRAHH
Trigger: ATGGTGTGCCCGGCCGGGGCAGGCGCCCTGGAGCCT...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTGAAGGGGGTCGTGCCTaGATGGTGGGGGCCGATCCT +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGREGGRA*MVGADP
Trigger: AGGATCGGCCCCCACCATCCAGGCACGACCCCCTTC...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCAGGGGCCAGTCACATaGATGCTCTGGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCQGPVT*MLWGQA
Trigger: GGCCTGCCCCCAGAGCATCCATGTGACTGGCCCCTG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGAACAGCAGCCCCGCTaGGTGACAGGCGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLEQQPR*VTGGSG
Trigger: TCCTGAGCCGCCTGTCACCCAGCGGGGCTGCTGTTC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGTCAGGGCCGGACCCTaGGCCTTCCTCAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLVRAGP*AFLRAG
Trigger: TCCAGCTCTGAGGAAGGCCCAGGGTCCGGCCCTGAC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTGATGCGGTCATCACTGGGCAGGGCCGGAGTGACGGGGGCGAAGGCCATGTGAGCACGGTCCTCTGCTaGGGTCTCAGCGGAATCGGG +
Preference number: 4 (lower is better)
Translates to: GDAVITGQGRSDGGEGHVSTVLC*GLSGIG
Trigger: CCCGATTCCGCTGAGACCCCAGCAGAGGACCGTGCT...CACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCAGTGATGACCGCATCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCAGCACGGTCCTCTGCTaGGGTCTCAGCGGAATCGGG +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPSTVLC*GLSGIG
Trigger: CCCGATTCCGCTGAGACCCCAGCAGAGGACCGTGCT...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCAGCCGGGGCCGCACTaGAGAGAGGGGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGQPGPH*REGQAQ
Trigger: CTGGGCCTGCCCCTCTCTCCAGTGCGGCCCCGGCTG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGACACCAACACAGGCTaGCCCTGCCTCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPDTNTG*PCLQCS
Trigger: GGAGCACTGGAGGCAGGGCCAGCCTGTGTTGGTGTC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACCCAGGCTGCTGGGCTaGGGAGGTCCGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTPRLLG*GGPRGL
Trigger: GAGCCCCCTCGGACCTCCCCAGCCCAGCAGCCTGGG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCATGCTGCCCAGGCTGCTaGGCTGGGGAGGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPCCPGC*AGEVRG
Trigger: CCCTCGGACCTCCCCAGCCCAGCAGCCTGGGCAGCA...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGAGCTGGGGCTCCAGTaGACGCAGGGCAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPELGLQ*TQGKAR
Trigger: CCGGGCCTTGCCCTGCGTCCACTGGAGCCCCAGCTC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGGCTCAGTCCCAGGGTaGCTGGGCCTGGCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTGSVPG*LGLASA
Trigger: GGCCGACGCCAGGCCCAGCCACCCTGGGACTGAGCC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGGCTCAGTCCCAGGGTaGCTGGGCCTGGCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADGSVPG*LGLASA
Trigger: GGCCGACGCCAGGCCCAGCCACCCTGGGACTGAGCC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGCGCAGCAGGACCTCTaGTCGCCATCGCCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLAQQDL*SPSPEA
Trigger: CGCTTCTGGCGATGGCGATCAGAGGTCCTGCTGCGC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGAGTGGGTGGGTAGGATaGACAGCAGCCCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGSGWVG*TAAPLG
Trigger: ACCCAGCGGGGCTGCTGTTCATCCTACCCACCCACT...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGATCTCCGCACTTGCTaGGAGTGGCAGGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGDLRTC*EWQACP
Trigger: AGGGCACGCCTGCCACTCTCAGCAAGTGCGGAGATC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATGGGCAGGGCCGGAGTaGCGGGGGCGAAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTWAGPE*RGRRPC
Trigger: ACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCATGCACCAGGATGCTaGCCAGGTCGGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGHAPGC*PGRPPP
Trigger: TGGAGGTGGCCGACCTGGTCAGCATCCTGGTGCATG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTTCTCCCGCTCTGTCTaGTCAGCGCGCTCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCFSRSV*SARSRS
Trigger: AGAGCGCGAGCGCGCTGAGCAGACAGAGCGGGAGAA...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTGCCAGGAGTCTGGGGTaGTCAGGACGCCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRARSLG*SGRPSK
Trigger: TTTGGAGGGGCGTCCTGAGCACCCCAGACTCCTGGC...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGCCAGGAGTCTGGGGTaGTCAGGACGCCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGARSLG*SGRPSK
Trigger: TTTGGAGGGGCGTCCTGAGCACCCCAGACTCCTGGC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGCCAGTCACATGGATaGTCTGGGGGCAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCGQSHG*SGGRPD
Trigger: GTCTGGCCTGCCCCCAGAGCATCCATGTGACTGGCC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTGCCTCCCCGGCTCTCTaGAGGTGCCCACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRASPAL*RCPPEF
Trigger: AAACTCTGGTGGGCACCTGCAGAGAGCCGGGGAGGC...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCTCTCCATCCCTCTGGTaGAGTGAAGGGCGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPSPSLW*SEGRSA
Trigger: GGCCGAACGCCCTTCACTGCACCAGAGGGATGGAGA...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGGGGCACCTTGGTGTTaGTGGTGGCCCCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLGAPWC*WWPQLV
Trigger: TACCAGCTGGGGCCACCAGCAACACCAAGGTGCCCC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGGCCCGCCCAGTGCCTaGCACACGACCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLGPPSA*HTTTGH
Trigger: GTGGCCTGTGGTCGTGTGGCAGGCACTGGGCGGGCC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGCCCGGCCTCCTGCGTaGACTCCTCCGCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLARPPA*TPPRTA
Trigger: AGCAGTCCGCGGAGGAGTGCACGCAGGAGGCCGGGC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCAAGGCTGGGGCTCCTaGAGCCACAGCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCQGWGS*SHSKAP
Trigger: AGGGGCTTTGCTGTGGCTGCAGGAGCCCCAGCCTTG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCAAGGCTGGGGCTCCTaGAGCCACAGCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRQGWGS*SHSKAP
Trigger: AGGGGCTTTGCTGTGGCTGCAGGAGCCCCAGCCTTG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCACCTGGCCTCCAAGTaGCCCAAGAGCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPHLASK*PKSFCP
Trigger: GGGACAGAAGCTCTTGGGGCACTTGGAGGCCAGGTG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGCCCCAGCTCCGGGCTaGCCTACTCCATTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPAPAPG*PTPFVS
Trigger: AGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGGGCTCGGGAGTCTCTaGACAGGGAGGTCACCTCGT +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGGLGSL*TGRSPR
Trigger: ACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGCCC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGAGGCTCCAGGGCGCCTaGCCCGGCCGGGCACACCAT +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELRLQGA*PGRAHH
Trigger: ATGGTGTGCCCGGCCGGGGCAGGCGCCCTGGAGCCT...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGTCGTGCCTGGATGGTaGGGGCCGATCCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPVVPGW*GPILGP
Trigger: GGGTCCCAGGATCGGCCCCCACCATCCAGGCACGAC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGGGGTCGTGCCTGGATaGTGGGGGCCGATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPGVVPG*WGPILG
Trigger: TCCCAGGATCGGCCCCCACCATCCAGGCACGACCCC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGTTCCTCTCCCCATTCTaGGGGCCCTCGCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGFLSPF*GPSPST
Trigger: TGTGGAGGGCGAGGGCCCCCAGAATGGGGAGAGGAA...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGCGAGGTGGGCACGCTaGCCCGCAGAATGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTARWAR*PAECQR
Trigger: CCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCGC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGCGAGGTGGGCACGCTaGCCCGCAGAATGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGARWAR*PAECQR
Trigger: CCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCGC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGCGAGGTGGGCACGCTaGCCCGCAGAATGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLARWAR*PAECQR
Trigger: CCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCGC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGGGGCCACAGCGAGGTaGGCACGCTGGCCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADGATAR*ARWPAE
Trigger: TTCTGCGGGCCAGCGTGCCCACCTCGCTGTGGCCCC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGAGGGTGGCAAGCAGGTaGGCACCCAGAAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGRVASR*APRREL
Trigger: GAGCTCCCTTCTGGGTGCCCACCTGCTTGCCACCCT...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGAGGGCACTTTGGGCTaGCCCCCGGAGTATACCCAG +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGEGTLG*PPEYTQ
Trigger: CTGGGTATACTCCGGGGGCCAGCCCAAAGTGCCCTC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGAACAGCAGCCCCGCTaGGTGACAGGCGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLEQQPR*VTGGSG
Trigger: TCCTGAGCCGCCTGTCACCCAGCGGGGCTGCTGTTC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGTGGAAAAGGGTCCGGTaGCCGCTTGGGGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGWKRVR*PLGGWT
Trigger: AGTCCAGCCCCCAAGCGGCCACCGGACCCTTTTCCA...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATGCTGCCCAGGCTGCTaGGCTGGGGAGGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTCCPGC*AGEVRG
Trigger: CCCTCGGACCTCCCCAGCCCAGCAGCCTGGGCAGCA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCCACACAGAGGTTCTTaGTCCCCAGGTGTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPPHRGS*SPGVPG
Trigger: ACCGGGGACACCTGGGGACCAAGAACCTCTGTGTGG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGAGTCAGGGGGAAGGCTaGGTCCCTGGTGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGSQGEG*VPGGRA
Trigger: AGCTCTGCCACCAGGGACCCAGCCTTCCCCCTGACT...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCTGGGCTGAGCACCTaGTCTACCTGTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLPGLST*STCPHP
Trigger: GGGGTGGGGACAGGTAGACCAGGTGCTCAGCCCAGG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCACCTCCCTGGACCATGTaGCCTGCAGGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPPPWTM*PAGAGP
Trigger: TGGCCCTGCCCCTGCAGGCCACATGGTCCAGGGAGG...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGTCCCCCTCCCTCCCTaGACCATGTGGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPVPLPP*TMWPAG
Trigger: CCCTGCAGGCCACATGGTCCAGGGAGGGAGGGGGAC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCATGGTGTCCTGTCCCTTaGGCCCCAGCTCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPWCPVP*APAPGC
Trigger: GCAGCCCGGAGCTGGGGCCCAAGGGACAGGACACCA...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCCAAAGTCTCCTCAGTaGGAGGCAAGGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLPKSPQ*EARPQA
Trigger: GGCCTGGGGCCTTGCCTCCCACTGAGGAGACTTTGG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCCAAAGTCTCCTCAGTaGGAGGCAAGGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGPKSPQ*EARPQA
Trigger: GGCCTGGGGCCTTGCCTCCCACTGAGGAGACTTTGG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGAGGGAGGTCACCTCGTaGCTGTGCCCCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLREVTS*LCPRTL
Trigger: CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCT...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCAGGGTGGCTGGGCCTaGCGTCGGCCATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGQGGWA*RRPWPL
Trigger: CAGTGGCCATGGCCGACGCCAGGCCCAGCCACCCTG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCAGTCCCAGGGTGGCTaGGCCTGGCGTCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGQSQGG*AWRRPW
Trigger: CCATGGCCGACGCCAGGCCCAGCCACCCTGGGACTG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAACCAGGCCCTGCACCTaGTGGGGAGCCCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTTRPCT*WGAPAG
Trigger: GCCTGCAGGGGCTCCCCACCAGGTGCAGGGCCTGGT...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCCTTGCTGCCTAAGCTaGAGGCAGAGGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPPCCLS*RQRALW
Trigger: CCAAAGTGCCCTCTGCCTTCAGCTTAGGCAGCAAGG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCGGGGGTCTCCTCTTTaGTGCTCTTGGTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRRGSPL*CSWSCG
Trigger: CCCACAGGACCAAGAGCATCAAAGAGGAGACCCCCG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTGGGCAGGGCCGGAGTaGCGGGGGCGAAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELWAGPE*RGRRPC
Trigger: ACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTGACAGAGCCCTCGTCTaGCTTTGGGCGAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRDRALV*LWAKLR
Trigger: CCTGAGCTTCGCCCAAAGTCAGACGAGGGCTCTGTC...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGACAGAGCCCTCGTCTaGCTTTGGGCGAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCDRALV*LWAKLR
Trigger: CCTGAGCTTCGCCCAAAGTCAGACGAGGGCTCTGTC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACGGGAAGGGGCTGAGTaGCATCGCCCATGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTREGAE*HRPCRS
Trigger: GGAGCGGCATGGGCGATGTCACTCAGCCCCTTCCCG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCGGGAAGGGGCTGAGTaGCATCGCCCATGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGREGAE*HRPCRS
Trigger: GGAGCGGCATGGGCGATGTCACTCAGCCCCTTCCCG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGGACCGGGAAGGGGCTaGGTGACATCGCCCATGCCG +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLGPGRG*VTSPMP
Trigger: CGGCATGGGCGATGTCACTCAGCCCCTTCCCGGTCC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCATCGGACTCCGGGATCTaGAGGATGCGGCACACGGCG +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPSDSGI*RMRHTA
Trigger: CGCCGTGTGCCGCATCCTGCAGATCCCGGAGTCCGA...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCACACAGCGGCCCATGGTaGAGTCCATCTCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPHSGPW*SPSRGG
Trigger: CCCGCCTCGAGATGGACTGCACCATGGGCCGCTGTG...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCAGATGGCCACCACTATaGTCAGGCATCAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPRWPPL*SGIRGP
Trigger: TGGCCCCCTGATGCCTGAGCATAGTGGTGGCCATCT...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCCCAGGTTCCGCAGCTaGCAAGGGCTCCTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCPRFRS*QGLLCQ
Trigger: TTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTGGG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGACCTCGGGGCTGCCTaGCCTTTTGAGGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLDLGAA*PFEGPE
Trigger: CTCCGGGCCCTCAAAAGGGCAGGCAGCCCCGAGGTC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCAAACCACTGAGCAGGTaGTTGGCGAGGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPKPLSR*LARPVL
Trigger: CAGCACAGGCCTCGCCAAGCACCTGCTCAGTGGTTT...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGGCCCGCCCAGTGCCTaGCACACGACCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELGPPSA*HTTTGH
Trigger: GTGGCCTGTGGTCGTGTGGCAGGCACTGGGCGGGCC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAGCGTGCCCGGCCTCCTaGGTGCACTCCTCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQACPAS*VHSSAD
Trigger: GTCCGCGGAGGAGTGCACGCAGGAGGCCGGGCACGC...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGCAGGCCCAGGCCCTTaGGCAGACCCGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGAGPGP*ADPGQL
Trigger: GAGCTGGCCCGGGTCTGCGCAAGGGCCTGGGCCTGC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCACCTGGCCTCCAAGTaGCCCAAGAGCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRHLASK*PKSFCP
Trigger: GGGACAGAAGCTCTTGGGGCACTTGGAGGCCAGGTG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCACCTGGCCTCCAAGTaGCCCAAGAGCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLHLASK*PKSFCP
Trigger: GGGACAGAAGCTCTTGGGGCACTTGGAGGCCAGGTG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGCTCACACCATAGGCTaGCCAGAGCTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLAHTIG*PELGLQ
Trigger: CTGGAGCCCCAGCTCTGGGCAGCCTATGGTGTGAGC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGTGTGCCCGGAACACGTaGCACACAGTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGCARNT*HTVLTW
Trigger: CCAGGTCAGCACTGTGTGGCACGTGTTCCGGGCACA...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGCGCTGGGCGTCCTGTaGCCGGAACACGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGALGVL*PEHVPH
Trigger: GTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGGGAGGGGAACAGAGTaGCCTGCTTGTGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLGRGTE*PACAQS
Trigger: ACTCTGGGCACAAGCAGGGCACTCTGTTCCCCTCCC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCTTGGAGGAAGTCAATTaGCCCCAGTGCGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPLEEVN*PQCGPG
Trigger: ACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAA...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGGTGGGGGCCGATCCTaGGACCCAGGAGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTGGGRS*DPGERH
Trigger: GTGCCTCTCTCCTGGGTCCCAGGATCGGCCCCCACC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGGGGTCGTGCCTGGATaGTGGGGGCCGATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGGVVPG*WGPILG
Trigger: TCCCAGGATCGGCCCCCACCATCCAGGCACGACCCC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGGGGTCGTGCCTGGATaGTGGGGGCCGATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRGVVPG*WGPILG
Trigger: TCCCAGGATCGGCCCCCACCATCCAGGCACGACCCC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCGGAGATGGCCGAGTTaGGGGAAAGGCCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGRRWPS*GKGRGA
Trigger: GGCCCCTCGGCCTTTCCCCCAACTCGGCCATCTCCG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGCCCCGGGTCGGAGATaGCCGAGTTGGGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRAPGRR*PSWGKG
Trigger: GCCTTTCCCCCAACTCGGCCATCTCCGACCCGGGGC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCATCTAGGGCCGCAGGTTaGAGGGGTCGGACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPSRAAG*RGRTPG
Trigger: TCCCGGAGTCCGACCCCTCCAACCTGCGGCCCTAGA...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGAGGCACAGCGGCCCATaGTGCAGTCCATCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLRHSGP*CSPSRG
Trigger: GCCTCGAGATGGACTGCACCATGGGCCGCTGTGCCT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTCGCCCTCCACAAGTaGGAGCATGTCCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLLALHK*EHVLGA
Trigger: GGCCCCAAGGACATGCTCCCACTTGTGGAGGGCGAG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGAGGGTGGCAAGCAGGTaGGCACCCAGAAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLRVASR*APRREL
Trigger: GAGCTCCCTTCTGGGTGCCCACCTGCTTGCCACCCT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGAGGCAGAGGGCACTTTaGGCTGGCCCCCGGAGTATA +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGRQRAL*AGPRSI
Trigger: TATACTCCGGGGGCCAGCCCAAAGTGCCCTCTGCCT...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGCTGGTGGCCCCAGCTaGTACCCAAGGTTCCCATCG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLAGGPS*YPRFPS
Trigger: CGATGGGAACCTTGGGTACCAGCTGGGGCCACCAGC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCTGCCCATTGCTCCCTaGACCTCGGGGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLLPIAP*TSGLPA
Trigger: GGCAGGCAGCCCCGAGGTCCAGGGAGCAATGGGCAG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCTGCCCATTGCTCCCTaGACCTCGGGGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRLPIAP*TSGLPA
Trigger: GGCAGGCAGCCCCGAGGTCCAGGGAGCAATGGGCAG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCTGCCCATTGCTCCCTaGACCTCGGGGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADLPIAP*TSGLPA
Trigger: GGCAGGCAGCCCCGAGGTCCAGGGAGCAATGGGCAG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCAGGGAGAGCCAGGCATaGTATGTCCTGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPRESQA*YVLKSR
Trigger: CCGGGACTTCAGGACATACCATGCCTGGCTCTCCCT...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGAGCACGGTCCTCTGCTaGGGTCTCAGCGGAATCGGG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLSTVLC*GLSGIG
Trigger: CCCGATTCCGCTGAGACCCCAGCAGAGGACCGTGCT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCAGCCGGGGCCGCACTaGAGAGAGGGGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPQPGPH*REGQAQ
Trigger: CTGGGCCTGCCCCTCTCTCCAGTGCGGCCCCGGCTG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGAGGTGGAAGCCACGCCGAGGGCAAGGCTGGGGCTCCTGCAGCCACAGCAAAGTGCCTCCAGTGCTCCTaGAAGAGGTGGAAGCCACGC +
Preference number: 4 (lower is better)
Translates to: RGGSHAEGKAGAPAATAKCLQCS*KRWKPR
Trigger: GCGTGGCTTCCACCTCTTCCAGGAGCACTGGAGGCA...CTTTGCTGTGGCTGCAGGAGCCCCAGCCTTGCCCTCGGCGTGGCTTCCACCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCCAGGCTGCTGGGCTaGGGAGGTCCGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPRLLG*GGPRGL
Trigger: GAGCCCCCTCGGACCTCCCCAGCCCAGCAGCCTGGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCCGGAAGTGGCAGACTaGCAGCTAGGTTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGPEVAD*QLGSPP
Trigger: GGGTGGAGAACCTAGCTGCCAGTCTGCCACTTCCGG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAAAGCGGCGGATGCGCTaGGCGTCCTGTGCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTKRRMR*ASCARN
Trigger: GTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTT...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTAAGCGGCGGATGCGCTaGGCGTCCTGTGCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLKRRMR*ASCARN
Trigger: GTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTT...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGCCTGGCGTCGGCCATaGCCACTGCCACCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLAWRRP*PLPPRA
Trigger: TGCCCTTGGTGGCAGTGGCCATGGCCGACGCCAGGC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTGCTGCCCAGCCAGTTaGCCTTCCTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCCCPAS*PSSPHS
Trigger: AGAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCA...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATATCCCTCTGGTGCAGTaGAGGGCGTTCGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADIPLVQ*RAFGLP
Trigger: GGGGAGGCCGAACGCCCTTCACTGCACCAGAGGGAT...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTATCCCTCTGGTGCAGTaGAGGGCGTTCGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLIPLVQ*RAFGLP
Trigger: GGGGAGGCCGAACGCCCTTCACTGCACCAGAGGGAT...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGATCCCTCTGGTGCAGTaGAGGGCGTTCGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRIPLVQ*RAFGLP
Trigger: GGGGAGGCCGAACGCCCTTCACTGCACCAGAGGGAT...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCAGCAGCCCCGCTGGGTaGCAGGCGGCTCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPSSPAG*QAAQER
Trigger: CCTCTCCTGAGCCGCCTGTCACCCAGCGGGGCTGCT...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCAGGCATGGTATGTCCTaGAGTCCCGGGTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCRHGMS*SPGSWR
Trigger: TCTCCAGGACCCGGGACTTCAGGACATACCATGCCT...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGGTCCCCCAAACCACTaGGCAGGTGCTTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLGPPNH*AGAWRG
Trigger: GCCTCGCCAAGCACCTGCTCAGTGGTTTGGGGGACC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGTGTCCTTTGGATCCCTaGCACCAACACAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGCPLDP*HQHRLA
Trigger: GGCCAGCCTGTGTTGGTGTCAGGGATCCAAAGGACA...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCTCCCCGTCCAGGCCTaGAAGGAAGTCTTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGLPVQA*KEVFLC
Trigger: GCACAGAAAGACTTCCTTTCAGGCCTGGACGGGGAG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCTCCCCGTCCAGGCCTaGAAGGAAGTCTTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRLPVQA*KEVFLC
Trigger: GCACAGAAAGACTTCCTTTCAGGCCTGGACGGGGAG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGAAGTTGTGCCTGGGCTaGGCACCTGGTCTACCTGTC +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLKLCLG*APGLPV
Trigger: GACAGGTAGACCAGGTGCTCAGCCCAGGCACAACTT...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAAGCGCCATCCCCTGCTaGAGTTGTGCCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPSAIPC*SCAWAE
Trigger: CTCAGCCCAGGCACAACTTCAGCAGGGGATGGCGCT...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGGACCGGGAAGGGGCTaGGTGACATCGCCCATGCCG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELGPGRG*VTSPMP
Trigger: CGGCATGGGCGATGTCACTCAGCCCCTTCCCGGTCC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGCCGAGGCCGTAGGTTaGGCCATGGGACGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELAEAVG*AMGRRD
Trigger: GTCTCGGCGTCCCATGGCGCAACCTACGGCCTCGGC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCATCTCGAGGCGGGCTaGCGGGCTCCTGTCTCACGA +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLHLEAG*RAPVSR
Trigger: TCGTGAGACAGGAGCCCGGCAGCCCGCCTCGAGATG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTGCCAAGGGCTCCTTTaGCAACCTGGGAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCCQGLL*QPGNAR
Trigger: CCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCA...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGTGCCAAGGGCTCCTTTaGCAACCTGGGAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLCQGLL*QPGNAR
Trigger: CCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCA...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCCGGCTCTCTGCAGGTaGCCACCAGAGTTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGPALCR*PPEFKP
Trigger: TGGCTTAAACTCTGGTGGGCACCTGCAGAGAGCCGG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGGCTGGACTGCCCATTaGTCCCTGGACCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRGWTAH*SLDLGA
Trigger: AGCCCCGAGGTCCAGGGAGCAATGGGCAGTCCAGCC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGGCTGGACTGCCCATTaGTCCCTGGACCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTGWTAH*SLDLGA
Trigger: AGCCCCGAGGTCCAGGGAGCAATGGGCAGTCCAGCC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTTCCTCCCTCTCCAGCTaGCTGGGCACAACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRSSLSS*LGTTLA
Trigger: TGCCAAAGTTGTGCCCAGGCAGCTGGAGAGGGAGGA...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCACACAGCCGGTGGCTaGAGCGGGGACATCGCCAGT +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRHTAGG*SGDIAS
Trigger: ACTGGCGATGTCCCCGCTGCAGCCACCGGCTGTGTG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGCTTGGCAGGGGCAGTaGCCCCGGATATCAAACTTG +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGAWQGQ*PRISNL
Trigger: CAAGTTTGATATCCGGGGGCACTGCCCCTGCCAAGC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGCTTGGCAGGGGCAGTaGCCCCGGATATCAAACTTG +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLAWQGQ*PRISNL
Trigger: CAAGTTTGATATCCGGGGGCACTGCCCCTGCCAAGC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCTGTCCCCCACAGGTTaGCCTGCAATGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPLSPTG*PAMSFG
Trigger: TCCAAAGGACATTGCAGGGCAACCTGTGGGGGACAG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp ATGCGGTCATCACTGGGCAGGGCCGGAGTGACGGGGGCGAAGGCCATGTGTATTCCCAGAATGTTGTGCTaGCCAGGCTGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MRSSLGRAGVTGAKAMCIPRMLC*PGCWAG
Trigger: CCCAGCCCAGCAGCCTGGGCAGCACAACATTCTGGG...AATACACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCAGTGATGACCGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCTAGGTTCTCCACCCTaGTGGTGTCCTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCLGSPP*WCPHPP
Trigger: TGGGGGATGAGGACACCAGCAGGGTGGAGAACCTAG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGAGTGGTGTGTCGGCATaGACCAGGATGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLSGVSA*TRMLTR
Trigger: CCTGGTCAGCATCCTGGTGCATGCCGACACACCACT...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGTGTGCCCGGAACACGTaGCACACAGTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLCARNT*HTVLTW
Trigger: CCAGGTCAGCACTGTGTGGCACGTGTTCCGGGCACA...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGAGAGTGCCCTGCTTGTaGCCAGAGTGGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGRVPCL*PEWCLW
Trigger: CCACAAGCACCACTCTGGGCACAAGCAGGGCACTCT...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACTGGACCATGTGGCCTaGAGGGGCAGGGCCAACCAC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTLDHVA*RGRANH
Trigger: GTGGTTGGCCCTGCCCCTGCAGGCCACATGGTCCAG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGGACTCTGCCTTGCCTaGTCTTGCACTCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPGLCLA*SCTQEH
Trigger: ATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTGTGCCCCAGGACTCTaGCTTGCCTGCTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCCAPGL*LACSCT
Trigger: AGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACA...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGCGCCGCCGCAGCCCTaGATCCAGGTAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGAPPQP*IQVAAA
Trigger: GGCAGCTGCTACCTGGATGCAGGGCTGCGGCGGCGC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGTGCTCACCAGGCCCTaGACCTGGTGGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELVLTRP*TWWGAP
Trigger: AGGGGCTCCCCACCAGGTGCAGGGCCTGGTGAGCAC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGGCCGCACCAGCTTCTaGGCCGAGGCCGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELGRTSF*AEAVGC
Trigger: GCAACCTACGGCCTCGGCCCAGAAGCTGGTGCGGCC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGGGAAGCCAGGAGTCTaGGGTGCTCAGGACGCCCCT +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGGKPGV*GAQDAP
Trigger: AGGGGCGTCCTGAGCACCCCAGACTCCTGGCTTCCC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGGGAAGCCAGGAGTCTaGGGTGCTCAGGACGCCCCT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTGKPGV*GAQDAP
Trigger: AGGGGCGTCCTGAGCACCCCAGACTCCTGGCTTCCC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCACTCGCCCTCCACAAGTaGGAGCATGTCCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPLALHK*EHVLGA
Trigger: GGCCCCAAGGACATGCTCCCACTTGTGGAGGGCGAG...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCATTCCTCTCCCCATTCTaGGGGCCCTCGCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPFLSPF*GPSPST
Trigger: TGTGGAGGGCGAGGGCCCCCAGAATGGGGAGAGGAA...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTGTTCTGCAGTGCCTaGAAAAGGGTCCGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLLFCSA*KRVRWP
Trigger: CGGCCACCGGACCCTTTTCCAGGCACTGCAGAACAG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGTCCTGGAGACTGGCCTaGCCATCTTGGGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGSWRLA*PSWGPF
Trigger: GAAAGGACCCCAAGATGGCCAGGCCAGTCTCCAGGA...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTCCTGGAGACTGGCCTaGCCATCTTGGGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCSWRLA*PSWGPF
Trigger: GAAAGGACCCCAAGATGGCCAGGCCAGTCTCCAGGA...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGAGGGAGAGCCAGGCATaGTATGTCCTGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLRESQA*YVLKSR
Trigger: CCGGGACTTCAGGACATACCATGCCTGGCTCTCCCT...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGTCAGGGCCGGACCCTaGGCCTTCCTCAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADVRAGP*AFLRAG
Trigger: TCCAGCTCTGAGGAAGGCCCAGGGTCCGGCCCTGAC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGTCCTCTGTCACGGCTaGCCCTTGGCCTTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTVLCHG*PLAFPL
Trigger: CAGCGGGAAGGCCAAGGGCCAGCCGTGACAGAGGAC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGCAGCGTGGAATGCCTaGGCTGTCCTCTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPAAWNA*AVLCHG
Trigger: GCCGTGACAGAGGACAGCCCAGGCATTCCACGCTGC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GAAGGCCATGTGTATTCGCTCATGGCCCAAGCAGAGTTTGACCGCGGTAGAAGCCAGCCGGGGCCGCACTaGAGAGAGGGGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGHVYSLMAQAEFDRGRSQPGPH*REGQAQ
Trigger: CTGGGCCTGCCCCTCTCTCCAGTGCGGCCCCGGCTG...GCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATACACATGGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACGCCGAGGGCAAGGCTaGGGCTCCTGCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGRRGQG*GSCSHS
Trigger: GCTGTGGCTGCAGGAGCCCCAGCCTTGCCCTCGGCG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCTGCTGCCCAGGCTGCTaGGCTGGGGAGGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPCCPGC*AGEVRG
Trigger: CCCTCGGACCTCCCCAGCCCAGCAGCCTGGGCAGCA...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGGTTCTCCACCCTGCTaGTGTCCTCATCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLGSPPC*CPHPPK
Trigger: CTTTGGGGGATGAGGACACCAGCAGGGTGGAGAACC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCGGAGGAGTGGGGATTaGAGGAAGTCAATTGCCCCC +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRRRSGD*RKSIAP
Trigger: GGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGAGAGATGGGGCGGACTaGAGCTTGCTGGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGRDGAD*SLLGGV
Trigger: TACTCCACCCAGCAAGCTCCAGTCCGCCCCATCTCT...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTAGAGATGGGGCGGACTaGAGCTTGCTGGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRRDGAD*SLLGGV
Trigger: TACTCCACCCAGCAAGCTCCAGTCCGCCCCATCTCT...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCAGTCCCAGGGTGGCTaGGCCTGGCGTCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPQSQGG*AWRRPW
Trigger: CCATGGCCGACGCCAGGCCCAGCCACCCTGGGACTG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGCCGGGCACACCATCTaGAGAAAGCGGCGGATGCGC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGAGHTI*RKRRMR
Trigger: GCGCATCCGCCGCTTTCTCCAGATGGTGTGCCCGGC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCGCCAGAAGCGCAACTaGGAGTGGGGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRRQKRN*EWGSCS
Trigger: GGAGCAGCTTCCCCACTCTCAGTTGCGCTTCTGGCG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312841.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCGCCAGAAGCGCAACTaGGAGTGGGGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADRQKRN*EWGSCS
Trigger: GGAGCAGCTTCCCCACTCTCAGTTGCGCTTCTGGCG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312841.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGCGCAGCAGGACCTCTaGTCGCCATCGCCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELAQQDL*SPSPEA
Trigger: CGCTTCTGGCGATGGCGATCAGAGGTCCTGCTGCGC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTAGTGGGTGGGTAGGATaGACAGCAGCCCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLSGWVG*TAAPLG
Trigger: ACCCAGCGGGGCTGCTGTTCATCCTACCCACCCACT...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGAGTGGGTGGGTAGGATaGACAGCAGCCCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRSGWVG*TAAPLG
Trigger: ACCCAGCGGGGCTGCTGTTCATCCTACCCACCCACT...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGGCTGCCTGCCCTTTTaGGGGCCCGGAGCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPGCLPF*GPGAEQ
Trigger: TTGCTCGGCTCCGGGCCCTCAAAAGGGCAGGCAGCC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGATCTCCGCACTTGCTaGGAGTGGCAGGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLDLRTC*EWQACP
Trigger: AGGGCACGCCTGCCACTCTCAGCAAGTGCGGAGATC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCATCCGCGGACTGCTCCTaGAAGCCTGCTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPSADCS*KPAFSL
Trigger: CAGGGAGAAAGCAGGCTTTCAGGAGCAGTCCGCGGA...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTGGGCGTTTTCTGTGTTaGTTCCTTCTGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRGRFLC*FLLLAC
Trigger: GCAGGCCAGCAGAAGGAATCAACACAGAAAACGCCC...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp ACCACCTGTGCGATAATGCTGTCCAGGATGTTGGTGATGCGGTCATCACTGGGCTGGGCAGGGCCGGAGTaGCGGGGGCGAAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: TTCAIMLSRMLVMRSSLGWAGPE*RGRRPC
Trigger: ACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCA...GCCCAGTGATGACCGCATCACCAACATCCTGGACAGCATTATCGCACAGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR TCA 90 bp TGGGCGAAGCTCAGGCCAGGAGAAGCCCTCCCAGAATGTTGTGCTGCCCAGGCTGACAGAGCCCTCGTCTaGCTTTGGGCGAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WAKLRPGEALPECCAAQADRALV*LWAKLR
Trigger: CCTGAGCTTCGCCCAAAGTCAGACGAGGGCTCTGTC...AGCCTGGGCAGCACAACATTCTGGGAGGGCTTCTCCTGGCCTGAGCTTCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR TCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGAGCGCCATCCCCTGCTaGAGTTGTGCCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRSAIPC*SCAWAE
Trigger: CTCAGCCCAGGCACAACTTCAGCAGGGGATGGCGCT...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCGGGAAGGGGCTGAGTaGCATCGCCCATGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPREGAE*HRPCRS
Trigger: GGAGCGGCATGGGCGATGTCACTCAGCCCCTTCCCG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGGACCGGGAAGGGGCTaGGTGACATCGCCCATGCCG +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGGPGRG*VTSPMP
Trigger: CGGCATGGGCGATGTCACTCAGCCCCTTCCCGGTCC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GCAGAGAGAAGGACAAGGCAGGGGCCCTCGGCCAGCACGGTCCTCTGCTGGGGTGGGCGTTTTCTGTGTTaGTTCCTTCCTGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: AERRTRQGPSASTVLCWGGRFLC*FLPGWR
Trigger: TCTCCAGCCAGGAAGGAATCAACACAGAAAACGCCC...ACCCCAGCAGAGGACCGTGCTGGCCGAGGGCCCCTGCCTTGTCCTTCTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTTCTCCCGCTCTGTCTaGTCAGCGCGCTCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLFSRSV*SARSRS
Trigger: AGAGCGCGAGCGCGCTGAGCAGACAGAGCGGGAGAA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTCTCCCAGGTTGGGGTaGCCTTCAGGAAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLSPRLG*PSGSWA
Trigger: CGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATCTCCCAGGTTGGGGTaGCCTTCAGGAAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTSPRLG*PSGSWA
Trigger: CGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGCATCTCGAGGCGGGCTaGCGGGCTCCTGTCTCACGA +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELHLEAG*RAPVSR
Trigger: TCGTGAGACAGGAGCCCGGCAGCCCGCCTCGAGATG...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGCCAGGAGTCTGGGGTaGTCAGGACGCCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLARSLG*SGRPSK
Trigger: TTTGGAGGGGCGTCCTGAGCACCCCAGACTCCTGGC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGGCCAGTCACATGGATaGTCTGGGGGCAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTGQSHG*SGGRPD
Trigger: GTCTGGCCTGCCCCCAGAGCATCCATGTGACTGGCC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGCCTCCCCGGCTCTCTaGAGGTGCCCACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGASPAL*RCPPEF
Trigger: AAACTCTGGTGGGCACCTGCAGAGAGCCGGGGAGGC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCAGCGGGCAAGGATTCTaGTGCCGGCCAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGSGQGF*CRPAPI
Trigger: GATGGGAGCTGGCCGGCAGCAGAATCCTTGCCCGCT...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGGCACAGTGTCTGGCTaGCCCAGGAAGAGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRGTVSG*PRKSGQ
Trigger: TTGCCCGCTCTTCCTGGGGCAGCCAGACACTGTGCC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGCATTGAGCCAGTTTTaGAGGGAGAGCCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGALSQF*RESQAW
Trigger: CCATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCTGCTCCTGAAAGCCTaGTTTCTCCCTGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGLLLKA*FLPGPP
Trigger: GGGCGGGCCAGGGAGAAAGCAGGCTTTCAGGAGCAG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCCAGACCTGGTGCATTaGAGTGCTCAGCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLPDLVH*SAQLCQ
Trigger: TTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGCCAGCACGGTCCTCTaGTGGGGTCTCAGCGGAATC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGASTVL*WGLSGI
Trigger: GATTCCGCTGAGACCCCAGCAGAGGACCGTGCTGGC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCATGGCCCTGCCTCCAGTaGTCCTGGAAGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPWPCLQ*SWKRWK
Trigger: CTTCCACCTCTTCCAGGAGCACTGGAGGCAGGGCCA...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCCCCACAGGTTGCCCTaGAATGTCCTTTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLPHRLP*NVLWIP
Trigger: AGGGATCCAAAGGACATTGCAGGGCAACCTGTGGGG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCCCAGAATGTTGTGCTaGCCAGGCTGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGPRMLC*PGCWAG
Trigger: CCCAGCCCAGCAGCCTGGGCAGCACAACATTCTGGG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCACCTCCCAGAATGTTGTaGTGCCCAGGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPPPRML*CPGCWA
Trigger: AGCCCAGCAGCCTGGGCAGCACAACATTCTGGGAGG...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTAGGTTCTCCACCCTaGTGGTGTCCTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLLGSPP*WCPHPP
Trigger: TGGGGGATGAGGACACCAGCAGGGTGGAGAACCTAG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGAGTGGTGTGTCGGCATaGACCAGGATGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLSGVSA*TRMLTR
Trigger: CCTGGTCAGCATCCTGGTGCATGCCGACACACCACT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAGGAGAAAGCGGCGGATaGGCTGGGCGTCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQGESGG*AGRPVP
Trigger: GGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCC...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCTTGTTCAGCATGCCTaGAGTGAGCCCAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPLVQHA*SEPSED
Trigger: ATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGTGCTCACCAGGCCCTaGACCTGGTGGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPVLTRP*TWWGAP
Trigger: AGGGGCTCCCCACCAGGTGCAGGGCCTGGTGAGCAC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGGTGGGGGCCGATCCTaGGACCCAGGAGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGGGGRS*DPGERH
Trigger: GTGCCTCTCTCCTGGGTCCCAGGATCGGCCCCCACC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAGTCGTGCCTGGATGGTaGGGGCCGATCCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQVVPGW*GPILGP
Trigger: GGGTCCCAGGATCGGCCCCCACCATCCAGGCACGAC...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGAAGGGGGTCGTGCCTaGATGGTGGGGGCCGATCCT +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELEGGRA*MVGADP
Trigger: AGGATCGGCCCCCACCATCCAGGCACGACCCCCTTC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACGGAGATGGCCGAGTTaGGGGAAAGGCCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQRRWPS*GKGRGA
Trigger: GGCCCCTCGGCCTTTCCCCCAACTCGGCCATCTCCG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTAGGCACAGCGGCCCATaGTGCAGTCCATCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLRHSGP*CSPSRG
Trigger: GCCTCGAGATGGACTGCACCATGGGCCGCTGTGCCT...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGAGGCACAGCGGCCCATaGTGCAGTCCATCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRRHSGP*CSPSRG
Trigger: GCCTCGAGATGGACTGCACCATGGGCCGCTGTGCCT...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCTCGCCCTCCACAAGTaGGAGCATGTCCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADLALHK*EHVLGA
Trigger: GGCCCCAAGGACATGCTCCCACTTGTGGAGGGCGAG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCTCGCTCCAGGATCTTaGTCTCCAGAAGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGLAPGS*SPEGKG
Trigger: GCCCTTTCCTTCTGGAGACCAAGATCCTGGAGCGAG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTATCTCTCCATCCCTCTaGTGCAGTGAAGGGCGTTCG +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRISPSL*CSEGRS
Trigger: CGAACGCCCTTCACTGCACCAGAGGGATGGAGAGAT...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATAGGAGAGGGGCACCTTaGTGTTGCTGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADRRGAP*CCWWPQ
Trigger: CTGGGGCCACCAGCAACACCAAGGTGCCCCTCTCCT...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAAGGAGAGGGGCACCTTaGTGTTGCTGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTRRGAP*CCWWPQ
Trigger: CTGGGGCCACCAGCAACACCAAGGTGCCCCTCTCCT...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTCAGGGCAGCCGCGTaGACATTCAAACTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLLRAAA*TFKLLR
Trigger: TCGGAGCAGTTTGAATGTCCACGCGGCTGCCCTGAG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCAGAGCTGGAGTTGGTaGCTGTGTCTTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCQSWSW*LCLPPA
Trigger: AGCAGGAGGAAGACACAGCCACCAACTCCAGCTCTG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGCAGCGTGGAATGCCTaGGCTGTCCTCTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADAAWNA*AVLCHG
Trigger: GCCGTGACAGAGGACAGCCCAGGCATTCCACGCTGC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGCAGCGTGGAATGCCTaGGCTGTCCTCTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRAAWNA*AVLCHG
Trigger: GCCGTGACAGAGGACAGCCCAGGCATTCCACGCTGC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGACATCGCCAGTaGGTGTTGAAGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLRGHRQ*VLKSPW
Trigger: CCATGGACTCTTCAACACCCACTGGCGATGTCCCCG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCTGCCAAAGCCTGGCTaGAGACAAACTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCLPKPG*RQTGSA
Trigger: TGCTGACCCAGTTTGTCTCCAGCCAGGCTTTGGCAG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGTTGATTCCTTCTGCTaGCCTGCATCCCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTVDSFC*PASPGA
Trigger: GGCCCCCGGGGATGCAGGCCAGCAGAAGGAATCAAC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGACACCAACACAGGCTaGCCCTGCCTCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTDTNTG*PCLQCS
Trigger: GGAGCACTGGAGGCAGGGCCAGCCTGTGTTGGTGTC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGACACCAACACAGGCTaGCCCTGCCTCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGDTNTG*PCLQCS
Trigger: GGAGCACTGGAGGCAGGGCCAGCCTGTGTTGGTGTC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCTCAGCGCCTGCACCTaGCCTCCAAGTGCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADLSACT*PPSAPR
Trigger: TCTTGGGGCACTTGGAGGCCAGGTGCAGGCGCTGAG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CATGTGTATTCGCTCATGGCCCAAGCAGAGTTTGACCGCGGTAGAAGCCAGCAGTGCTGCCCAGGCTGCTaGGCTGGGGAGGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: HVYSLMAQAEFDRGRSQQCCPGC*AGEVRG
Trigger: CCCTCGGACCTCCCCAGCCCAGCAGCCTGGGCAGCA...CTGCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATACACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCACCGGAAGTGGCAGACTaGCAGCTAGGTTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPPEVAD*QLGSPP
Trigger: GGGTGGAGAACCTAGCTGCCAGTCTGCCACTTCCGG...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCAGGGCAAGGCCCGGTaGGAGGTAGGAAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADQGKAR*EVGSQV
Trigger: AACCTGGCTTCCTACCTCCCACCGGGCCTTGCCCTG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCAGGGCAAGGCCCGGTaGGAGGTAGGAAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGQGKAR*EVGSQV
Trigger: AACCTGGCTTCCTACCTCCCACCGGGCCTTGCCCTG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCAGGCCCTGCACCATCTaGAGAAAGCGGCGGATGCGC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGRPCTI*RKRRMR
Trigger: GCGCATCCGCCGCTTTCTCCAGATGGTGCAGGGCCT...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312841.9
CDS-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTAGGAGGGCAGAAGGTTaGAGGCCCCTTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRRRAEG*RPLVQH
Trigger: ATGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCT...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCTCCCTGGACCATGTaGCCTGCAGGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPPWTM*PAGAGP
Trigger: TGGCCCTGCCCCTGCAGGCCACATGGTCCAGGGAGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCTGGTGTCCTGTCCCTTaGGCCCCAGCTCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPWCPVP*APAPGC
Trigger: GCAGCCCGGAGCTGGGGCCCAAGGGACAGGACACCA...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCCAAAGTCTCCTCAGTaGGAGGCAAGGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADPKSPQ*EARPQA
Trigger: GGCCTGGGGCCTTGCCTCCCACTGAGGAGACTTTGG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATAGGGAGGTCACCTCGTaGCTGTGCCCCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADREVTS*LCPRTL
Trigger: CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCT...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCACTGGAGCTTGCTGGGTaGAGTAGGGCTCGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPLELAG*SRARES
Trigger: AGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAG...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGGTAGACGGGAGAGATaGGGCGGACTGGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPGRRER*GGLELA
Trigger: AGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGCCTGGCGTCGGCCATaGCCACTGCCACCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGAWRRP*PLPPRA
Trigger: TGCCCTTGGTGGCAGTGGCCATGGCCGACGCCAGGC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CAA 72 bp GGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCCTaGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GGHLVAVPQDSA*PALALRSIFGG
Trigger: TCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACGAGGTGACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCACGTTGCCAAGAGTATaGACAAGGCCTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCTLPRV*TRPGGQ
Trigger: TTGTCCCCCAGGCCTTGTTCATACTCTTGGCAACGT...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGATCTCCGCACTTGCTaGGAGTGGCAGGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELDLRTC*EWQACP
Trigger: AGGGCACGCCTGCCACTCTCAGCAAGTGCGGAGATC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTCCGCGGACTGCTCCTaGAAGCCTGCTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRSADCS*KPAFSL
Trigger: CAGGGAGAAAGCAGGCTTTCAGGAGCAGTCCGCGGA...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGGGCGTTTTCTGTGTTaGTTCCTTCTGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLGRFLC*FLLLAC
Trigger: GCAGGCCAGCAGAAGGAATCAACACAGAAAACGCCC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCGGGGGTCTCCTCTTTaGTGCTCTTGGTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADRGSPL*CSWSCG
Trigger: CCCACAGGACCAAGAGCATCAAAGAGGAGACCCCCG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCATGTCCTTTGGATCCCTaGCACCAACACAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPCPLDP*HQHRLA
Trigger: GGCCAGCCTGTGTTGGTGTCAGGGATCCAAAGGACA...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGGGGAGAGGAAGTGCTaGGTGACGCTGACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADGERKC*VTLTVL
Trigger: GAGCACAGTCAGCGTCACTCAGCACTTCCTCTCCCC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAATCGGACTCCGGGATCTaGAGGATGCGGCACACGGCG +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQSDSGI*RMRHTA
Trigger: CGCCGTGTGCCGCATCCTGCAGATCCCGGAGTCCGA...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGCTCCTGTCTCACGATaGCGTTCTCTGGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLAPVSR*RSLGPS
Trigger: AGACGGCCCCAGAGAACGGCATCGTGAGACAGGAGC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACATCTCGAGGCGGGCTaGCGGGCTCCTGTCTCACGA +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQHLEAG*RAPVSR
Trigger: TCGTGAGACAGGAGCCCGGCAGCCCGCCTCGAGATG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCGCTGGCCCGCAGAATaGCAGCGGATGGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRRWPAE*QRMGKH
Trigger: ATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCCCAGGTTCCGCAGCTaGCAAGGGCTCCTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADPRFRS*QGLLCQ
Trigger: TTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTGGG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCCCAGGTTCCGCAGCTaGCAAGGGCTCCTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGPRFRS*QGLLCQ
Trigger: TTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTGGG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTCTCCATCCCTCTGGTaGAGTGAAGGGCGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRSPSLW*SEGRSA
Trigger: GGCCGAACGCCCTTCACTGCACCAGAGGGATGGAGA...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTCTCCATCCCTCTGGTaGAGTGAAGGGCGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADSPSLW*SEGRSA
Trigger: GGCCGAACGCCCTTCACTGCACCAGAGGGATGGAGA...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGGCACAGTGTCTGGCTaGCCCAGGAAGAGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELGTVSG*PRKSGQ
Trigger: TTGCCCGCTCTTCCTGGGGCAGCCAGACACTGTGCC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGTGGACATTCAAACTaGTCCGAGTGCCGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLRGHSN*SECRVS
Trigger: GCTCACACGGCACTCGGAGCAGTTTGAATGTCCACG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACCCCCTGTTCTGCAGTaGCTGGAAAAGGGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTPPVLQ*LEKGPV
Trigger: CACCGGACCCTTTTCCAGGCACTGCAGAACAGGGGG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTTCTTGGGGTCCTTTCTaGTCATCATGCTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRSWGPF*SSCCPE
Trigger: CTCGGGACAGCATGATGAGCAGAAAGGACCCCAAGA...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCATGGTGGCAACGGCTaGAGCAGCGTGGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRHGGNG*SSVECL
Trigger: CAGGCATTCCACGCTGCTGCAGCCGTTGCCACCATG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACACACAGCCGGTGGCTaGAGCGGGGACATCGCCAGT +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGHTAGG*SGDIAS
Trigger: ACTGGCGATGTCCCCGCTGCAGCCACCGGCTGTGTG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGTTGACCCAGACCTGGTaGATTGCAGTGCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLLTQTW*IAVLSS
Trigger: AGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAA...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGAGGTGGAAGCCACGCCGAGGGCAAGGCTGGGGCTCCTGCAGCCACAGCAAAGTGTGGGTGTCGCCATTaGAGGAAGGTTGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: RGGSHAEGKAGAPAATAKCGCRH*RKVVEL
Trigger: CAACTCCACAACCTTCCTGCAATGGCGACACCCACA...CTTTGCTGTGGCTGCAGGAGCCCCAGCCTTGCCCTCGGCGTGGCTTCCACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCTGGCCCTGCCTCCAGTaGTCCTGGAAGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGWPCLQ*SWKRWK
Trigger: CTTCCACCTCTTCCAGGAGCACTGGAGGCAGGGCCA...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCCCACAGGTTGCCCTaGAATGTCCTTTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLPHRLP*NVLWIP
Trigger: AGGGATCCAAAGGACATTGCAGGGCAACCTGTGGGG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCCTCCCAGAATGTTGTaGTGCCCAGGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLPPRML*CPGCWA
Trigger: AGCCCAGCAGCCTGGGCAGCACAACATTCTGGGAGG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGTGCCCGGAACACGTaGCACACAGTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLCARNT*HTVLTW
Trigger: CCAGGTCAGCACTGTGTGGCACGTGTTCCGGGCACA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGGGAGGGGAACAGAGTaGCCTGCTTGTGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTGRGTE*PACAQS
Trigger: ACTCTGGGCACAAGCAGGGCACTCTGTTCCCCTCCC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACTGGACCATGTGGCCTaGAGGGGCAGGGCCAACCAC +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGLDHVA*RGRANH
Trigger: GTGGTTGGCCCTGCCCCTGCAGGCCACATGGTCCAG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTTGCCTTGCCTGCTCTTaGACTCAGGAGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRCLACS*TQEHLW
Trigger: CCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCA...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAGTCGGCCATGGCCACTaGCACCAAGGGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQVGHGH*HQGQTG
Trigger: GCCTGTCTGCCCTTGGTGGCAGTGGCCATGGCCGAC...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAATCTAGGGCCGCAGGTTaGAGGGGTCGGACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQSRAAG*RGRTPG
Trigger: TCCCGGAGTCCGACCCCTCCAACCTGCGGCCCTAGA...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGTGCCCTTCAGGAAGCTaGGCGTACTCTCCATCACTC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLCPSGS*AYSPSL
Trigger: GAGTGATGGAGAGTACGCCCAGCTTCCTGAAGGGCA...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGAGGGTGGCAAGCAGGTaGGCACCCAGAAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELRVASR*APRREL
Trigger: GAGCTCCCTTCTGGGTGCCCACCTGCTTGCCACCCT...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACAGGGGCCAGTCACATaGATGCTCTGGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGQGPVT*MLWGQA
Trigger: GGCCTGCCCCCAGAGCATCCATGTGACTGGCCCCTG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGAGGCAGAGGGCACTTTaGGCTGGCCCCCGGAGTATA +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRRQRAL*AGPRSI
Trigger: TATACTCCGGGGGCCAGCCCAAAGTGCCCTCTGCCT...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAAGTATGAACAAGGCCTaGGGGACAAGCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPSMNKA*GTSGPG
Trigger: TCCTGGCCCGCTTGTCCCCCAGGCCTTGTTCATACT...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGAGGAGAGGGGCACCTTaGTGTTGCTGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELRRGAP*CCWWPQ
Trigger: CTGGGGCCACCAGCAACACCAAGGTGCCCCTCTCCT...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGAACAGCAGCCCCGCTaGGTGACAGGCGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGEQQPR*VTGGSG
Trigger: TCCTGAGCCGCCTGTCACCCAGCGGGGCTGCTGTTC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGTCAGGGCCGGACCCTaGGCCTTCCTCAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGVRAGP*AFLRAG
Trigger: TCCAGCTCTGAGGAAGGCCCAGGGTCCGGCCCTGAC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGCAGGGCCGGAGTGACGGGGGCGAAGGCCATGTGTATTCGCTCATGGCCCAAGATGCTCTTGGTCCTGTaGGTGTCGCCATTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GRAGVTGAKAMCIRSWPKMLLVL*VSPLQE
Trigger: TTCCTGCAATGGCGACACCCACAGGACCAAGAGCAT...CTTGGGCCATGAGCGAATACACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGCCTCCAGTGCTCCTaGAAGAGGTGGAAGCCACGC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLCLQCS*KRWKPR
Trigger: GCGTGGCTTCCACCTCTTCCAGGAGCACTGGAGGCA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTAGGTTGAGTTTTCCATaGAGGGCGCAGTACTCCGGA +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRRLSFP*RAQYSG
Trigger: TCCGGAGTACTGCGCCCTCCATGGAAAACTCAACCT...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGAGGTTGAGTTTTCCATaGAGGGCGCAGTACTCCGGA +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLRLSFP*RAQYSG
Trigger: TCCGGAGTACTGCGCCCTCCATGGAAAACTCAACCT...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACCACACAGAGGTTCTTaGTCCCCAGGTGTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTPHRGS*SPGVPG
Trigger: ACCGGGGACACCTGGGGACCAAGAACCTCTGTGTGG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGAGTCAGGGGGAAGGCTaGGTCCCTGGTGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELSQGEG*VPGGRA
Trigger: AGCTCTGCCACCAGGGACCCAGCCTTCCCCCTGACT...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCTGGGCTGAGCACCTaGTCTACCTGTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPGLST*STCPHP
Trigger: GGGGTGGGGACAGGTAGACCAGGTGCTCAGCCCAGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGTGGGTCTCGGAGGAGTaGGGATTGGAGGAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLWVSEE*GLEEVN
Trigger: ATTGACTTCCTCCAATCCCCACTCCTCCGAGACCCA...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCTGGGTCTCGGAGGAGTaGGGATTGGAGGAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCWVSEE*GLEEVN
Trigger: ATTGACTTCCTCCAATCCCCACTCCTCCGAGACCCA...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGGTAGACGGGAGAGATaGGGCGGACTGGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLGRRER*GGLELA
Trigger: AGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
3UTR CAA 72 bp TCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTaGTCTCTAAGGCAGATTTCCATGTCCCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLGPQLRAALLH*SLRQISMSPSL
Trigger: GAGGGAGGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATGCTGCCCAGCCAGTTaGCCTTCCTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTCCPAS*PSSPHS
Trigger: AGAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGCTGCCCAGCCAGTTaGCCTTCCTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLCCPAS*PSSPHS
Trigger: AGAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACCTTGCTGCCTAAGCTaGAGGCAGAGGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTPCCLS*RQRALW
Trigger: CCAAAGTGCCCTCTGCCTTCAGCTTAGGCAGCAAGG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGCTCCGAGTGCCGTGTaGGCCATGTCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGAPSAV*AMSSSA
Trigger: AGCTGAAGAAGACATGGCTCACACGGCACTCGGAGC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATAGGCATGGTATGTCCTaGAGTCCCGGGTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADRHGMS*SPGSWR
Trigger: TCTCCAGGACCCGGGACTTCAGGACATACCATGCCT...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCCGGATATCAAACTTaGCCCAGACCTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLPGYQT*PRPGAL
Trigger: CAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGG...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGTCCTTTGGATCCCTaGCACCAACACAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLCPLDP*HQHRLA
Trigger: GGCCAGCCTGTGTTGGTGTCAGGGATCCAAAGGACA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp TTTGGGCGAAGCTCAGGCCAGGAGAAGCCCTCCCAGAATGTTGTGCTGCCCAGGTGTCCTTTGGATCCCTaGCACCAACACAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FGRSSGQEKPSQNVVLPRCPLDP*HQHRLA
Trigger: GGCCAGCCTGTGTTGGTGTCAGGGATCCAAAGGACA...CCTGGGCAGCACAACATTCTGGGAGGGCTTCTCCTGGCCTGAGCTTCGCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR TCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACATGCACCAGGATGCTaGCCAGGTCGGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQHAPGC*PGRPPP
Trigger: TGGAGGTGGCCGACCTGGTCAGCATCCTGGTGCATG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAGAGGGGTCGGCTGTCTaGAGCAGTCAGGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQEGSAV*SSQAQS
Trigger: GGACTGAGCCTGACTGCTTCAGACAGCCGACCCCTC...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGAGGGGTCGGCTGTCTaGAGCAGTCAGGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPEGSAV*SSQAQS
Trigger: GGACTGAGCCTGACTGCTTCAGACAGCCGACCCCTC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCTTCTCCCGCTCTGTCTaGTCAGCGCGCTCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPFSRSV*SARSRS
Trigger: AGAGCGCGAGCGCGCTGAGCAGACAGAGCGGGAGAA...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGGCCAGTCACATGGATaGTCTGGGGGCAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPGQSHG*SGGRPD
Trigger: GTCTGGCCTGCCCCCAGAGCATCCATGTGACTGGCC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCTGCAGCAGCGTGGAATaGCTGGGCTGTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGCSSVE*LGCPLS
Trigger: TGACAGAGGACAGCCCAGGCATTCCACGCTGCTGCA...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACTGCTCCTGAAAGCCTaGTTTCTCCCTGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGLLLKA*FLPGPP
Trigger: GGGCGGGCCAGGGAGAAAGCAGGCTTTCAGGAGCAG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGCAGTGCTCAGCTCTaGCAAAGCCTGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRCSAQL*QSLAGD
Trigger: GTCTCCAGCCAGGCTTTGGCAGAGCTGAGCACTGCA...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAGCCAGCACGGTCCTCTaGTGGGGTCTCAGCGGAATC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQASTVL*WGLSGI
Trigger: GATTCCGCTGAGACCCCAGCAGAGGACCGTGCTGGC...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACCCAGAATGTTGTGCTaGCCAGGCTGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGPRMLC*PGCWAG
Trigger: CCCAGCCCAGCAGCCTGGGCAGCACAACATTCTGGG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCCAGAATGTTGTGCTaGCCAGGCTGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPRMLC*PGCWAG
Trigger: CCCAGCCCAGCAGCCTGGGCAGCACAACATTCTGGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCTAGGTTCTCCACCCTaGTGGTGTCCTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADLGSPP*WCPHPP
Trigger: TGGGGGATGAGGACACCAGCAGGGTGGAGAACCTAG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGCTCACACCATAGGCTaGCCAGAGCTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGAHTIG*PELGLQ
Trigger: CTGGAGCCCCAGCTCTGGGCAGCCTATGGTGTGAGC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTAGTGGTGTGTCGGCATaGACCAGGATGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLSGVSA*TRMLTR
Trigger: CCTGGTCAGCATCCTGGTGCATGCCGACACACCACT...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATAGAGTGCCCTGCTTGTaGCCAGAGTGGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADRVPCL*PEWCLW
Trigger: CCACAAGCACCACTCTGGGCACAAGCAGGGCACTCT...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAAGAGTGCCCTGCTTGTaGCCAGAGTGGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTRVPCL*PEWCLW
Trigger: CCACAAGCACCACTCTGGGCACAAGCAGGGCACTCT...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATTGGAGGAAGTCAATTaGCCCCAGTGCGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTLEEVN*PQCGPG
Trigger: ACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATGTGCCCCAGGACTCTaGCTTGCCTGCTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTCAPGL*LACSCT
Trigger: AGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACGTCTTCTCCCAGGTTaGGGTGCCCTTCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTRLLPG*GALQEA
Trigger: AGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGCACGATGCCGTTCTCTaGGGCCGTCTTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELHDAVL*GRLLPG
Trigger: ACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTG...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAATTCCTCTCCCCATTCTaGGGGCCCTCGCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQFLSPF*GPSPST
Trigger: TGTGGAGGGCGAGGGCCCCCAGAATGGGGAGAGGAA...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGAGGGCACTTTGGGCTaGCCCCCGGAGTATACCCAG +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGEGTLG*PPEYTQ
Trigger: CTGGGTATACTCCGGGGGCCAGCCCAAAGTGCCCTC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTGTTCACTTCCTCGCTaGGTTCGCTGGCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADCSLPR*VRWLHW
Trigger: CCAGTGGAGCCAGCGAACCCAGCGAGGAAGTGAACA...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCTCAGGGCAGCCGCGTaGACATTCAAACTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRLRAAA*TFKLLR
Trigger: TCGGAGCAGTTTGAATGTCCACGCGGCTGCCCTGAG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCTCAGGGCAGCCGCGTaGACATTCAAACTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLLRAAA*TFKLLR
Trigger: TCGGAGCAGTTTGAATGTCCACGCGGCTGCCCTGAG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCTGGAAAAGGGTCCGGTaGCCGCTTGGGGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPWKRVR*PLGGWT
Trigger: AGTCCAGCCCCCAAGCGGCCACCGGACCCTTTTCCA...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGATGGAAAAGGGTCCGGTaGCCGCTTGGGGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGWKRVR*PLGGWT
Trigger: AGTCCAGCCCCCAAGCGGCCACCGGACCCTTTTCCA...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGCTGTTCTGCAGTGCCTaGAAAAGGGTCCGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELLFCSA*KRVRWP
Trigger: CGGCCACCGGACCCTTTTCCAGGCACTGCAGAACAG...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCACTGGCCTGGCCATCTTaGGGTCCTTTCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPLAWPS*GPFCSS
Trigger: TGATGAGCAGAAAGGACCCCAAGATGGCCAGGCCAG...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCTCCTGGAGACTGGCCTaGCCATCTTGGGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGSWRLA*PSWGPF
Trigger: GAAAGGACCCCAAGATGGCCAGGCCAGTCTCCAGGA...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAAGGGAGAGCCAGGCATaGTATGTCCTGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTRESQA*YVLKSR
Trigger: CCGGGACTTCAGGACATACCATGCCTGGCTCTCCCT...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGGCCTTCCTCAGAGCTaGAGTTGGTGGCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPGLPQS*SWWLCL
Trigger: AAGACACAGCCACCAACTCCAGCTCTGAGGAAGGCC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACGGGGACATCGCCAGTaGGTGTTGAAGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTRGHRQ*VLKSPW
Trigger: CCATGGACTCTTCAACACCCACTGGCGATGTCCCCG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAAGCACGGTCCTCTGCTaGGGTCTCAGCGGAATCGGG +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQSTVLC*GLSGIG
Trigger: CCCGATTCCGCTGAGACCCCAGCAGAGGACCGTGCT...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCCCAGGGCTTTCTCCTaGATCTTCCGTTCCACCACC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGPRAFS*IFRSTT
Trigger: GGTGGTGGAACGGAAGATCCAGGAGAAAGCCCTGGG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCCCAGGGCTTTCTCCTaGATCTTCCGTTCCACCACC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADPRAFS*IFRSTT
Trigger: GGTGGTGGAACGGAAGATCCAGGAGAAAGCCCTGGG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCCCTGCAATGTCCTTTaGATCCCTGACACCAACACA +
Preference number: 4 (lower is better)
Translates to: ARESLHREVTSWLCPRTLPCNVL*IPDTNT
Trigger: TGTGTTGGTGTCAGGGATCCAAAGGACATTGCAGGG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCCCTGCAATGTCCTTTaGATCCCTGACACCAACACA +
Preference number: 4 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRPCNVL*IPDTNT
Trigger: TGTGTTGGTGTCAGGGATCCAAAGGACATTGCAGGG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCTCAGCGCCTGCACCTaGCCTCCAAGTGCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPLSACT*PPSAPR
Trigger: TCTTGGGGCACTTGGAGGCCAGGTGCAGGCGCTGAG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCAGAGTTTGACCGCGGTAGAAGCCAGCAGTTCGCAGAGAGAAGGACAAGGCAGCTCAGCGCCTGCACCTaGCCTCCAAGTGCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: AEFDRGRSQQFAERRTRQLSACT*PPSAPR
Trigger: TCTTGGGGCACTTGGAGGCCAGGTGCAGGCGCTGAG...CTGCCTTGTCCTTCTCTCTGCGAACTGCTGGCTTCTACCGCGGTCAAACTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGGTTCTCCACCCTGCTaGTGTCCTCATCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADGSPPC*CPHPPK
Trigger: CTTTGGGGGATGAGGACACCAGCAGGGTGGAGAACC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCAGGGCAAGGCCCGGTaGGAGGTAGGAAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPQGKAR*EVGSQV
Trigger: AACCTGGCTTCCTACCTCCCACCGGGCCTTGCCCTG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGGTAGACGGGAGAGATaGGGCGGACTGGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELGRRER*GGLELA
Trigger: AGCAAGCTCCAGTCCGCCCCATCTCTCCCGTCTACC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTGATGCGGTCATCACTGGGCAGGGCCGGAGTGACGGGGGCGAAGGCCATGTGTGTGTTGATTCCTTCCTaGCTGGAGACAAACTGGGTC +
Preference number: 4 (lower is better)
Translates to: VMRSSLGRAGVTGAKAMCVLIPS*LETNWV
Trigger: GACCCAGTTTGTCTCCAGCCAGGAAGGAATCAACAC...ACACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCAGTGATGACCGCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
3UTR CAA 72 bp CGTTCCACCACCTGTGCGATAATGCTGTCCAGGATGTaGGTGATGCGGTCATCACTGGGCAGGGCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: RSTTCAIMLSRM*VMRSSLGRAGV
Trigger: CACTCCGGCCCTGCCCAGTGATGACCGCATCACCAACATCCTGGACAGCATTATCGCACAGGTGGTGGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR TCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCCACAGGGTCACTCTTaGGATGGCCACCACTATGCT +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGPQGHS*DGHHYA
Trigger: AGCATAGTGGTGGCCATCTCAAGAGTGACCCTGTGG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACGGGGGTCTCCTCTTTaGTGCTCTTGGTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGRGSPL*CSWSCG
Trigger: CCCACAGGACCAAGAGCATCAAAGAGGAGACCCCCG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGGGGAGAGGAAGTGCTaGGTGACGCTGACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPGERKC*VTLTVL
Trigger: GAGCACAGTCAGCGTCACTCAGCACTTCCTCTCCCC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTGGTGCTTGTGGGGTTaGCCAGAAATCCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADWCLWG*PEIPKS
Trigger: GGACTTGGGGATTTCTGGTCAACCCCACAAGCACCA...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGTGCTTGTGGGGTTaGCCAGAAATCCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLWCLWG*PEIPKS
Trigger: GGACTTGGGGATTTCTGGTCAACCCCACAAGCACCA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACGCTGGCCCGCAGAATaGCAGCGGATGGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQRWPAE*QRMGKH
Trigger: ATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTGCCAAGGGCTCCTTTaGCAACCTGGGAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELCQGLL*QPGNAR
Trigger: CCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGCCCAGCCCAGACGTTaGCAAGAGTATGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRAQPRR*QEYEQG
Trigger: GCCTTGTTCATACTCTTGGCAACGTCTGGGCTGGGC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCGTGGACATTCAAACTaGTCCGAGTGCCGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGRGHSN*SECRVS
Trigger: GCTCACACGGCACTCGGAGCAGTTTGAATGTCCACG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACCCCCTGTTCTGCAGTaGCTGGAAAAGGGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGPPVLQ*LEKGPV
Trigger: CACCGGACCCTTTTCCAGGCACTGCAGAACAGGGGG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTCCTCCCTCTCCAGCTaGCTGGGCACAACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELSSLSS*LGTTLA
Trigger: TGCCAAAGTTGTGCCCAGGCAGCTGGAGAGGGAGGA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACATGGTGGCAACGGCTaGAGCAGCGTGGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGHGGNG*SSVECL
Trigger: CAGGCATTCCACGCTGCTGCAGCCGTTGCCACCATG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTGCAGTGCTCAGCTCTaGCAAAGCCTGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELCSAQL*QSLAGD
Trigger: GTCTCCAGCCAGGCTTTGGCAGAGCTGAGCACTGCA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCCTGGTGCATTGCAGTaGTCAGCTCTGCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLPGALQ*SALPKP
Trigger: AGGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TATTCGCTCATGGCCCAAGCAGAGTTTGACCGCGGTAGAAGCCAGCAGTTCGCAGCCAGCACGGTCCTCTaGTGGGGTCTCAGCGGAATC +
Preference number: 4 (lower is better)
Translates to: YSLMAQAEFDRGRSQQFAASTVL*WGLSGI
Trigger: GATTCCGCTGAGACCCCAGCAGAGGACCGTGCTGGC...TGCGAACTGCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp ATGCGGTCATCACTGGGCAGGGCCGGAGTGACGGGGGCGAAGGCCATGTGTATTCCGTTCCACCACCTGTaGGATAATGCTGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: MRSSLGRAGVTGAKAMCIPFHHL*DNAVQD
Trigger: ATCCTGGACAGCATTATCGCACAGGTGGTGGAACGG...AATACACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCAGTGATGACCGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp ACCACCTGTGCGATAATGCTGTCCAGGATGTTGGTGATGCGGTCATCACTGGGCCAAGGCTGGGGCTCCTaGAGCCACAGCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TTCAIMLSRMLVMRSSLGQGWGS*SHSKAP
Trigger: AGGGGCTTTGCTGTGGCTGCAGGAGCCCCAGCCTTG...GCCCAGTGATGACCGCATCACCAACATCCTGGACAGCATTATCGCACAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAATGGCCCTGCCTCCAGTaGTCCTGGAAGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQWPCLQ*SWKRWK
Trigger: CTTCCACCTCTTCCAGGAGCACTGGAGGCAGGGCCA...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCCCCACAGGTTGCCCTaGAATGTCCTTTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLPHRLP*NVLWIP
Trigger: AGGGATCCAAAGGACATTGCAGGGCAACCTGTGGGG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCTGTCCCCCACAGGTTaGCCTGCAATGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGLSPTG*PAMSFG
Trigger: TCCAAAGGACATTGCAGGGCAACCTGTGGGGGACAG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCTGTCCCCCACAGGTTaGCCTGCAATGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADLSPTG*PAMSFG
Trigger: TCCAAAGGACATTGCAGGGCAACCTGTGGGGGACAG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGGGAACAGAGTGCCCTaGTTGTGCCCAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPGNRVP*LCPEWC
Trigger: GCACCACTCTGGGCACAAGCAGGGCACTCTGTTCCC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGGGAACAGAGTGCCCTaGTTGTGCCCAGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGGNRVP*LCPEWC
Trigger: GCACCACTCTGGGCACAAGCAGGGCACTCTGTTCCC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGGGAGGGGAACAGAGTaGCCTGCTTGTGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGGRGTE*PACAQS
Trigger: ACTCTGGGCACAAGCAGGGCACTCTGTTCCCCTCCC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACAGAATGCCAGCGGATaGGTAAGCATGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTQNASG*VSMASF
Trigger: GAAGGAGGCCATGCTTACCCATCCGCTGGCATTCTG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGGGTCACTCTTGAGATaGCCACCACTATGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRGSLLR*PPLCSG
Trigger: GCCTGAGCATAGTGGTGGCCATCTCAAGAGTGACCC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACTCGCTCCAGGATCTTaGTCTCCAGAAGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTLAPGS*SPEGKG
Trigger: GCCCTTTCCTTCTGGAGACCAAGATCCTGGAGCGAG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTGTTCACTTCCTCGCTaGGTTCGCTGGCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELCSLPR*VRWLHW
Trigger: CCAGTGGAGCCAGCGAACCCAGCGAGGAAGTGAACA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCTGGCCTGGCCATCTTaGGGTCCTTTCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGLAWPS*GPFCSS
Trigger: TGATGAGCAGAAAGGACCCCAAGATGGCCAGGCCAG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCAGAGCTGGAGTTGGTaGCTGTGTCTTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADQSWSW*LCLPPA
Trigger: AGCAGGAGGAAGACACAGCCACCAACTCCAGCTCTG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGGCCTTCCTCAGAGCTaGAGTTGGTGGCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGGLPQS*SWWLCL
Trigger: AAGACACAGCCACCAACTCCAGCTCTGAGGAAGGCC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTGAAGAGTCCATGGTaGCAACGGCTGCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADLKSPW*QRLQQR
Trigger: ACGCTGCTGCAGCCGTTGCCACCATGGACTCTTCAA...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGTGTTGAAGAGTCCATaGTGGCAACGGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGVLKSP*WQRLQQ
Trigger: CTGCTGCAGCCGTTGCCACCATGGACTCTTCAACAC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGTGTTGAAGAGTCCATaGTGGCAACGGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADVLKSP*WQRLQQ
Trigger: CTGCTGCAGCCGTTGCCACCATGGACTCTTCAACAC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TGGGCGAAGCTCAGGCCAGGAGAAGCCCTCCCAGAATGTTGTGCTGCCCAGGCTTGGCTGGAGACAAACTaGGTCAGCATCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: WAKLRPGEALPECCAAQAWLETN*VSIREQ
Trigger: CTGTTCCCTGATGCTGACCCAGTTTGTCTCCAGCCA...AGCCTGGGCAGCACAACATTCTGGGAGGGCTTCTCCTGGCCTGAGCTTCGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATAGCTCTGCCAAAGCCTaGCTGGAGACAAACTGGGTC +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADSSAKA*LETNWV
Trigger: GACCCAGTTTGTCTCCAGCCAGGCTTTGGCAGAGCT...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTAGCTCTGCCAAAGCCTaGCTGGAGACAAACTGGGTC +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLSSAKA*LETNWV
Trigger: GACCCAGTTTGTCTCCAGCCAGGCTTTGGCAGAGCT...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCCCAAGAGCTTCTGTCCCCCACAGGTTGCCCTGCAATGTCCTTTGGATCCCTGCCCAGGGCTTTCTCCTaGATCTTCCGTTCCACCACC +
Preference number: 4 (lower is better)
Translates to: PQELLSPTGCPAMSFGSLPRAFS*IFRSTT
Trigger: GGTGGTGGAACGGAAGATCCAGGAGAAAGCCCTGGG...CAGGGATCCAAAGGACATTGCAGGGCAACCTGTGGGGGACAGAAGCTCTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGCCACCTTCACTGCTTaGAACACAGCCCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGATFTA*NTAQSI
Trigger: GATGGACTGGGCTGTGTTCCAAGCAGTGAAGGTGGC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGAGGAGGGCAGAAGGTTaGAGGCCCCTTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRRRAEG*RPLVQH
Trigger: ATGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCT...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACTGGAGCTTGCTGGGTaGAGTAGGGCTCGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGLELAG*SRARES
Trigger: AGACTCCCGAGCCCTACTCCACCCAGCAAGCTCCAG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCTTGCTGCCTAAGCTaGAGGCAGAGGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPCCLS*RQRALW
Trigger: CCAAAGTGCCCTCTGCCTTCAGCTTAGGCAGCAAGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGCTCCGAGTGCCGTGTaGGCCATGTCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPAPSAV*AMSSSA
Trigger: AGCTGAAGAAGACATGGCTCACACGGCACTCGGAGC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAAGGCATGGTATGTCCTaGAGTCCCGGGTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGRHGMS*SPGSWR
Trigger: TCTCCAGGACCCGGGACTTCAGGACATACCATGCCT...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp ACCACCTGTGCGATAATGCTGTCCAGGATGTTGGTGATGCGGTCATCACTGGGCCGGGGGTCTCCTCTTTaGTGCTCTTGGTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TTCAIMLSRMLVMRSSLGRGSPL*CSWSCG
Trigger: CCCACAGGACCAAGAGCATCAAAGAGGAGACCCCCG...GCCCAGTGATGACCGCATCACCAACATCCTGGACAGCATTATCGCACAGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR TCA 90 bp CCCCAAGAGCTTCTGTCCCCCACAGGTTGCCCTGCAATGTCCTTTGGATCCCTGTGTCCAGGATGTTGGTaGTGCGGTCATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: PQELLSPTGCPAMSFGSLCPGCW*CGHHWA
Trigger: TGCCCAGTGATGACCGCATCACCAACATCCTGGACA...CAGGGATCCAAAGGACATTGCAGGGCAACCTGTGGGGGACAGAAGCTCTTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR TCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCTCCCCGTCCAGGCCTaGAAGGAAGTCTTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPLPVQA*KEVFLC
Trigger: GCACAGAAAGACTTCCTTTCAGGCCTGGACGGGGAG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTGGTGCTTGTGGGGTTaGCCAGAAATCCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELWCLWG*PEIPKS
Trigger: GGACTTGGGGATTTCTGGTCAACCCCACAAGCACCA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAAGATGGCCACCACTATaGTCAGGCATCAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGRWPPL*SGIRGP
Trigger: TGGCCCCCTGATGCCTGAGCATAGTGGTGGCCATCT...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCGGCTCTCTGCAGGTaGCCACCAGAGTTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPALCR*PPEFKP
Trigger: TGGCTTAAACTCTGGTGGGCACCTGCAGAGAGCCGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCCTTTCTGCTCATCATaGTGTCCCGAGTCCACATCC +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRPFCSS*CPESTS
Trigger: GGATGTGGACTCGGGACAGCATGATGAGCAGAAAGG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGCATTGAGCCAGTTTTaGAGGGAGAGCCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELALSQF*RESQAW
Trigger: CCATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCAAACCACTGAGCAGGTaGTTGGCGAGGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPKPLSR*LARPVL
Trigger: CAGCACAGGCCTCGCCAAGCACCTGCTCAGTGGTTT...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGCCAGACCTGGTGCATTaGAGTGCTCAGCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELPDLVH*SAQLCQ
Trigger: TTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGG...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGCTTGGCAGGGGCAGTaGCCCCGGATATCAAACTTG +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPAWQGQ*PRISNL
Trigger: CAAGTTTGATATCCGGGGGCACTGCCCCTGCCAAGC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCTGTGGGTGTCGCCATTaGAGGAAGGTTGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGCGCRH*RKVVEL
Trigger: CAACTCCACAACCTTCCTGCAATGGCGACACCCACA...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACCGTTCCACCACCTGTaGGATAATGCTGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTPFHHL*DNAVQD
Trigger: ATCCTGGACAGCATTATCGCACAGGTGGTGGAACGG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TATTCGCTCATGGCCCAAGCAGAGTTTGACCGCGGTAGAAGCCAGCAGTTCGCATGGCCCTGCCTCCAGTaGTCCTGGAAGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: YSLMAQAEFDRGRSQQFAWPCLQ*SWKRWK
Trigger: CTTCCACCTCTTCCAGGAGCACTGGAGGCAGGGCCA...TGCGAACTGCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp CCCCAAGAGCTTCTGTCCCCCACAGGTTGCCCTGCAATGTCCTTTGGATCCCTGCCCCACAGGTTGCCCTaGAATGTCCTTTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: PQELLSPTGCPAMSFGSLPHRLP*NVLWIP
Trigger: AGGGATCCAAAGGACATTGCAGGGCAACCTGTGGGG...CAGGGATCCAAAGGACATTGCAGGGCAACCTGTGGGGGACAGAAGCTCTTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp TATTCGCTCATGGCCCAAGCAGAGTTTGACCGCGGTAGAAGCCAGCAGTTCGCACACCTGGCCTCCAAGTaGCCCAAGAGCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: YSLMAQAEFDRGRSQQFAHLASK*PKSFCP
Trigger: GGGACAGAAGCTCTTGGGGCACTTGGAGGCCAGGTG...TGCGAACTGCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCTTGTTCAGCATGCCTaGAGTGAGCCCAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADLVQHA*SEPSED
Trigger: ATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGCCTTGCCTGCTCTTaGACTCAGGAGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLCLACS*TQEHLW
Trigger: CCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCTGCCTTGCCTGCTCTTaGACTCAGGAGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGCLACS*TQEHLW
Trigger: CCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCA...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGATGTGCCCCAGGACTCTaGCTTGCCTGCTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGCAPGL*LACSCT
Trigger: AGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACA...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGGGTCACTCTTGAGATaGCCACCACTATGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELGSLLR*PPLCSG
Trigger: GCCTGAGCATAGTGGTGGCCATCTCAAGAGTGACCC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGATCTCTCCATCCCTCTaGTGCAGTGAAGGGCGTTCG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELISPSL*CSEGRS
Trigger: CGAACGCCCTTCACTGCACCAGAGGGATGGAGAGAT...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAAGTATGAACAAGGCCTaGGGGACAAGCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGSMNKA*GTSGPG
Trigger: TCCTGGCCCGCTTGTCCCCCAGGCCTTGTTCATACT...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGATGTTCACTTCCTCGCTaGGTTCGCTGGCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGCSLPR*VRWLHW
Trigger: CCAGTGGAGCCAGCGAACCCAGCGAGGAAGTGAACA...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTTGAAGAGTCCATGGTaGCAACGGCTGCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELLKSPW*QRLQQR
Trigger: ACGCTGCTGCAGCCGTTGCCACCATGGACTCTTCAA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGCTGGAGACAAACTaGGTCAGCATCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRWLETN*VSIREQ
Trigger: CTGTTCCCTGATGCTGACCCAGTTTGTCTCCAGCCA...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGAGCTCTGCCAAAGCCTaGCTGGAGACAAACTGGGTC +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELSSAKA*LETNWV
Trigger: GACCCAGTTTGTCTCCAGCCAGGCTTTGGCAGAGCT...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAATGCTCTTGGTCCTGTaGGTGTCGCCATTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: APGLCLACSCTQEHLWGTMLLVL*VSPLQE
Trigger: TTCCTGCAATGGCGACACCCACAGGACCAAGAGCAT...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGATGTGTATTCGCTCATaGCCCAAGCAGAGTTTGACC +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLMCIRS*PKQSLT
Trigger: GGTCAAACTCTGCTTGGGCCATGAGCGAATACACAT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TCCTGGATCTTCCGTTCCACCACCTGTGCGATAATGCTGTCCAGGATGTTGGTGGACACCAACACAGGCTaGCCCTGCCTCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SWIFRSTTCAIMLSRMLVDTNTG*PCLQCS
Trigger: GGAGCACTGGAGGCAGGGCCAGCCTGTGTTGGTGTC...CACCAACATCCTGGACAGCATTATCGCACAGGTGGTGGAACGGAAGATCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCGGAGGAGTGGGGATTaGAGGAAGTCAATTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPRRSGD*RKSIAP
Trigger: GGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCCACAGGGTCACTCTTaGGATGGCCACCACTATGCT +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPPQGHS*DGHHYA
Trigger: AGCATAGTGGTGGCCATCTCAAGAGTGACCCTGTGG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACCACAGGGTCACTCTTaGGATGGCCACCACTATGCT +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGPQGHS*DGHHYA
Trigger: AGCATAGTGGTGGCCATCTCAAGAGTGACCCTGTGG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGCCCGGATATCAAACTTaGCCCAGACCTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELPGYQT*PRPGAL
Trigger: CAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGG...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTCTTGGGGTCCTTTCTaGTCATCATGCTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELSWGPF*SSCCPE
Trigger: CTCGGGACAGCATGATGAGCAGAAAGGACCCCAAGA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGCGTGCCCGGCCTCCTaGGTGCACTCCTCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGACPAS*VHSSAD
Trigger: GTCCGCGGAGGAGTGCACGCAGGAGGCCGGGCACGC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCCTGGTGCATTGCAGTaGTCAGCTCTGCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPPGALQ*SALPKP
Trigger: AGGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTGTGGGTGTCGCCATTaGAGGAAGGTTGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELCGCRH*RKVVEL
Trigger: CAACTCCACAACCTTCCTGCAATGGCGACACCCACA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGGACTCTGCCTTGCCTaGTCTTGCACTCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGGLCLA*SCTQEH
Trigger: ATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCAGAATGCCAGCGGATaGGTAAGCATGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPQNASG*VSMASF
Trigger: GAAGGAGGCCATGCTTACCCATCCGCTGGCATTCTG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGGGGCCACAGCGAGGTaGGCACGCTGGCCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRGATAR*ARWPAE
Trigger: TTCTGCGGGCCAGCGTGCCCACCTCGCTGTGGCCCC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCATCTCTCCATCCCTCTaGTGCAGTGAAGGGCGTTCG +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPISPSL*CSEGRS
Trigger: CGAACGCCCTTCACTGCACCAGAGGGATGGAGAGAT...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACTGGCCTGGCCATCTTaGGGTCCTTTCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGLAWPS*GPFCSS
Trigger: TGATGAGCAGAAAGGACCCCAAGATGGCCAGGCCAG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCTTGAAGAGTCCATGGTaGCAACGGCTGCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPLKSPW*QRLQQR
Trigger: ACGCTGCTGCAGCCGTTGCCACCATGGACTCTTCAA...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGTGTTGAAGAGTCCATaGTGGCAACGGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPVLKSP*WQRLQQ
Trigger: CTGCTGCAGCCGTTGCCACCATGGACTCTTCAACAC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTGGCTGGAGACAAACTaGGTCAGCATCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELWLETN*VSIREQ
Trigger: CTGTTCCCTGATGCTGACCCAGTTTGTCTCCAGCCA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACTGCCAAAGCCTGGCTaGAGACAAACTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGLPKPG*RQTGSA
Trigger: TGCTGACCCAGTTTGTCTCCAGCCAGGCTTTGGCAG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TCCCCCAAAGCTCGGTGCAGCAGGAGGACAGAGCCCTCGTCTGACTTTGGGCGAATGTGTATTCGCTCATaGCCCAAGCAGAGTTTGACC +
Preference number: 4 (lower is better)
Translates to: SPKARCSRRTEPSSDFGRMCIRS*PKQSLT
Trigger: GGTCAAACTCTGCTTGGGCCATGAGCGAATACACAT...TCGCCCAAAGTCAGACGAGGGCTCTGTCCTCCTGCTGCACCGAGCTTTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACGCCGAGGGCAAGGCTaGGGCTCCTGCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRRRGQG*GSCSHS
Trigger: GCTGTGGCTGCAGGAGCCCCAGCCTTGCCCTCGGCG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAGCCACCTTCACTGCTTaGAACACAGCCCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQATFTA*NTAQSI
Trigger: GATGGACTGGGCTGTGTTCCAAGCAGTGAAGGTGGC...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAAGGAGGGCAGAAGGTTaGAGGCCCCTTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQRRAEG*RPLVQH
Trigger: ATGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCT...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAACGTTGCCAAGAGTATaGACAAGGCCTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGTLPRV*TRPGGQ
Trigger: TTGTCCCCCAGGCCTTGTTCATACTCTTGGCAACGT...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCCGGATATCAAACTTaGCCCAGACCTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPGYQT*PRPGAL
Trigger: CAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGTTGTTTAAGCCAGAATaGTTCCCAAGTTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLLFKPE*FPSFPK
Trigger: CTTGGGGAAACTTGGGAATCATTCTGGCTTAAACAA...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGCCGAGGCCGTAGGTTaGGCCATGGGACGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRAEAVG*AMGRRD
Trigger: GTCTCGGCGTCCCATGGCGCAACCTACGGCCTCGGC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACCGGGATCTGCAGGATaGGGCACACGGCGCGGATCG +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRPGSAG*GTRRGS
Trigger: CGATCCGCGCCGTGTGCCGCATCCTGCAGATCCCGG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAATCAAACTGCTCCGAGTaGCGTGTGAGCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQSNCSE*RVSHVF
Trigger: GAAGACATGGCTCACACGGCACTCGGAGCAGTTTGA...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCTCAAACTGCTCCGAGTaGCGTGTGAGCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: QLRAALLHLSLRQISMSPSNCSE*RVSHVF
Trigger: GAAGACATGGCTCACACGGCACTCGGAGCAGTTTGA...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCTTTCTGCTCATCATaGTGTCCCGAGTCCACATCC +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPFCSS*CPESTS
Trigger: GGATGTGGACTCGGGACAGCATGATGAGCAGAAAGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAATCTTGGGGTCCTTTCTaGTCATCATGCTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQSWGPF*SSCCPE
Trigger: CTCGGGACAGCATGATGAGCAGAAAGGACCCCAAGA...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp ACCACCTGTGCGATAATGCTGTCCAGGATGTTGGTGATGCGGTCATCACTGGGCCTGTCCCCCACAGGTTaGCCTGCAATGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: TTCAIMLSRMLVMRSSLGLSPTG*PAMSFG
Trigger: TCCAAAGGACATTGCAGGGCAACCTGTGGGGGACAG...GCCCAGTGATGACCGCATCACCAACATCCTGGACAGCATTATCGCACAGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGCCCCGGGTCGGAGATaGCCGAGTTGGGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRAPGRR*PSWGKG
Trigger: GCCTTTCCCCCAACTCGGCCATCTCCGACCCGGGGC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAGCTCCTTTGCCAACCTaGGAATGCTCGGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGAPLPT*ECSDPC
Trigger: ACAAGGATCCGAGCATTCCCAGGTTGGCAAAGGAGC...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACAGCCGGGGCCGCACTaGAGAGAGGGGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEQPGPH*REGQAQ
Trigger: CTGGGCCTGCCCCTCTCTCCAGTGCGGCCCCGGCTG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGCCCTGCAATGTCCTTTaGATCCCTGACACCAACACA +
Preference number: 4 (lower is better)
Translates to: VQHACSEPSEDAVVETELPCNVL*IPDTNT
Trigger: TGTGTTGGTGTCAGGGATCCAAAGGACATTGCAGGG...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAATGGGTCTCGGAGGAGTaGGGATTGGAGGAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQWVSEE*GLEEVN
Trigger: ATTGACTTCCTCCAATCCCCACTCCTCCGAGACCCA...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCAGGGTGGCTGGGCCTaGCGTCGGCCATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGQGGWA*RRPWPL
Trigger: CAGTGGCCATGGCCGACGCCAGGCCCAGCCACCCTG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGCGCAGCAGGACCTCTaGTCGCCATCGCCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRAQQDL*SPSPEA
Trigger: CGCTTCTGGCGATGGCGATCAGAGGTCCTGCTGCGC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGGCTGCCTGCCCTTTTaGGGGCCCGGAGCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGGCLPF*GPGAEQ
Trigger: TTGCTCGGCTCCGGGCCCTCAAAAGGGCAGGCAGCC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAGCACAACTTTGGCATTaGGCCAGTTTTGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQAQLWH*ASFAGR
Trigger: TCTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGC...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGCGGGCCTGGTACCATaGAAAGGGGCACAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRAGLVP*KGAQGG
Trigger: CCCACCCTGTGCCCCTTTTCATGGTACCAGGCCCGC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCCGGGATCTGCAGGATaGGGCACACGGCGCGGATCG +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGPGSAG*GTRRGS
Trigger: CGATCCGCGCCGTGTGCCGCATCCTGCAGATCCCGG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACACAGCGGCCCATGGTaGAGTCCATCTCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRHSGPW*SPSRGG
Trigger: CCCGCCTCGAGATGGACTGCACCATGGGCCGCTGTG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTTGCCAACCTGGGAATaGTCGGATCCTTGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLLPTWE*SDPCSK
Trigger: TTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCTTGCCAACCTGGGAATaGTCGGATCCTTGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGLPTWE*SDPCSK
Trigger: TTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAA...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGACCTCGGGGCTGCCTaGCCTTTTGAGGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGDLGAA*PFEGPE
Trigger: CTCCGGGCCCTCAAAAGGGCAGGCAGCCCCGAGGTC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp TTTCTCCTGGATCTTCCGTTCCACCACCTGTGCGATAATGCTGTCCAGGATGTTCCTCCCAGAATGTTGTaGTGCCCAGGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FLLDLPFHHLCDNAVQDVPPRML*CPGCWA
Trigger: AGCCCAGCAGCCTGGGCAGCACAACATTCTGGGAGG...AACATCCTGGACAGCATTATCGCACAGGTGGTGGAACGGAAGATCCAGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGCGCTGGGCGTCCTGTaGCCGGAACACGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGALGVL*PEHVPH
Trigger: GTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGATGGCCGCTTGGGGGCTaGACTGCCCATTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRWPLGG*TAHCSL
Trigger: CAGGGAGCAATGGGCAGTCCAGCCCCCAAGCGGCCA...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGTCCTCTGTCACGGCTaGCCCTTGGCCTTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRVLCHG*PLAFPL
Trigger: CAGCGGGAAGGCCAAGGGCCAGCCGTGACAGAGGAC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACGCCGAGGGCAAGGCTaGGGCTCCTGCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKERRGQG*GSCSHS
Trigger: GCTGTGGCTGCAGGAGCCCCAGCCTTGCCCTCGGCG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGTGGTGTCCTGTCCCTTaGGCCCCAGCTCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGWCPVP*APAPGC
Trigger: GCAGCCCGGAGCTGGGGCCCAAGGGACAGGACACCA...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGCCGGGCACACCATCTaGAGAAAGCGGCGGATGCGC +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRAGHTI*RKRRMR
Trigger: GCGCATCCGCCGCTTTCTCCAGATGGTGTGCCCGGC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
3UTR CAA 72 bp AAGGCCATGTGTATTCGCTCATGGCCCAAGCAGAGTTaGACCGCGGTAGAAGCCAGCAGTTCGCAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KAMCIRSWPKQS*TAVEASSSQRE
Trigger: TTCTCTCTGCGAACTGCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATACACATGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR TCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGCAGCCCCGCTGGGTaGCAGGCGGCTCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCSSPAG*QAAQER
Trigger: CCTCTCCTGAGCCGCCTGTCACCCAGCGGGGCTGCT...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGCGGGCCTGGTACCATaGAAAGGGGCACAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGAGLVP*KGAQGG
Trigger: CCCACCCTGTGCCCCTTTTCATGGTACCAGGCCCGC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTGTTTAAGCCAGAATaGTTCCCAAGTTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADLFKPE*FPSFPK
Trigger: CTTGGGGAAACTTGGGAATCATTCTGGCTTAAACAA...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTTGTTTAAGCCAGAATaGTTCCCAAGTTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRLFKPE*FPSFPK
Trigger: CTTGGGGAAACTTGGGAATCATTCTGGCTTAAACAA...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGGCACAGTGTCTGGCTaGCCCAGGAAGAGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRGTVSG*PRKSGQ
Trigger: TTGCCCGCTCTTCCTGGGGCAGCCAGACACTGTGCC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCACACAGCCGGTGGCTaGAGCGGGGACATCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGHTAGG*SGDIAS
Trigger: ACTGGCGATGTCCCCGCTGCAGCCACCGGCTGTGTG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGCCCGGCCTCCTGCGTaGACTCCTCCGCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCARPPA*TPPRTA
Trigger: AGCAGTCCGCGGAGGAGTGCACGCAGGAGGCCGGGC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAAGGGAACAGGCAGCGTaGCCGGCCTCCTGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEREQAA*PASCVH
Trigger: GTGCACGCAGGAGGCCGGGCACGCTGCCTGTTCCCT...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGCCAGCACGGTCCTCTaGTGGGGTCTCAGCGGAATC +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRASTVL*WGLSGI
Trigger: GATTCCGCTGAGACCCCAGCAGAGGACCGTGCTGGC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACAAGGCTGGGGCTCCTaGAGCCACAGCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRQGWGS*SHSKAP
Trigger: AGGGGCTTTGCTGTGGCTGCAGGAGCCCCAGCCTTG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGCTGGGCGTCCTGTaGCCGGAACACGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEALGVL*PEHVPH
Trigger: GTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCTCGGGAGTCTCTaGACAGGGAGGTCACCTCGT +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRGLGSL*TGRSPR
Trigger: ACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGCCC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAATGTGTATTCGCTCATaGCCCAAGCAGAGTTTGACC +
Preference number: 4 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGMCIRS*PKQSLT
Trigger: GGTCAAACTCTGCTTGGGCCATGAGCGAATACACAT...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GAAGGCCATGTGTATTCGCTCATGGCCCAAGCAGAGTTTGACCGCGGTAGAAGCCCCTGCAATGTCCTTTaGATCCCTGACACCAACACA +
Preference number: 4 (lower is better)
Translates to: EGHVYSLMAQAEFDRGRSPCNVL*IPDTNT
Trigger: TGTGTTGGTGTCAGGGATCCAAAGGACATTGCAGGG...GCTTCTACCGCGGTCAAACTCTGCTTGGGCCATGAGCGAATACACATGGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAAGTCAGGGGGAAGGCTaGGTCCCTGGTGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRSQGEG*VPGGRA
Trigger: AGCTCTGCCACCAGGGACCCAGCCTTCCCCCTGACT...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCAGTCCCAGGGTGGCTaGGCCTGGCGTCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCQSQGG*AWRRPW
Trigger: CCATGGCCGACGCCAGGCCCAGCCACCCTGGGACTG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACGCTGGCCCGCAGAATaGCAGCGGATGGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRRWPAE*QRMGKH
Trigger: ATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGGGGCACCTTGGTGTTaGTGGTGGCCCCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGGAPWC*WWPQLV
Trigger: TACCAGCTGGGGCCACCAGCAACACCAAGGTGCCCC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACATGGTGGCAACGGCTaGAGCAGCGTGGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRHGGNG*SSVECL
Trigger: CAGGCATTCCACGCTGCTGCAGCCGTTGCCACCATG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGGGCTCGGGAGTCTCTaGACAGGGAGGTCACCTCGT +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGGLGSL*TGRSPR
Trigger: ACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGCCC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGCCCCGGGTCGGAGATaGCCGAGTTGGGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCAPGRR*PSWGKG
Trigger: GCCTTTCCCCCAACTCGGCCATCTCCGACCCGGGGC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGCTGGTGGCCCCAGCTaGTACCCAAGGTTCCCATCG +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGAGGPS*YPRFPS
Trigger: CGATGGGAACCTTGGGTACCAGCTGGGGCCACCAGC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAATGGCCGCTTGGGGGCTaGACTGCCCATTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEWPLGG*TAHCSL
Trigger: CAGGGAGCAATGGGCAGTCCAGCCCCCAAGCGGCCA...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGTCCTCTGTCACGGCTaGCCCTTGGCCTTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEVLCHG*PLAFPL
Trigger: CAGCGGGAAGGCCAAGGGCCAGCCGTGACAGAGGAC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGTTGATTCCTTCTGCTaGCCTGCATCCCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGVDSFC*PASPGA
Trigger: GGCCCCCGGGGATGCAGGCCAGCAGAAGGAATCAAC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACCACACAGAGGTTCTTaGTCCCCAGGTGTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRPHRGS*SPGVPG
Trigger: ACCGGGGACACCTGGGGACCAAGAACCTCTGTGTGG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCTGTTTGTCTCCTaGGTCTCGGAGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRGLFVS*VSEEWG
Trigger: TCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGTCCGCGGACTGCTCCTaGAAGCCTGCTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGSADCS*KPAFSL
Trigger: CAGGGAGAAAGCAGGCTTTCAGGAGCAGTCCGCGGA...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGACAGAGCCCTCGTCTaGCTTTGGGCGAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGDRALV*LWAKLR
Trigger: CCTGAGCTTCGCCCAAAGTCAGACGAGGGCTCTGTC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTTCGGACTCCGGGATCTaGAGGATGCGGCACACGGCG +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCSDSGI*RMRHTA
Trigger: CGCCGTGTGCCGCATCCTGCAGATCCCGGAGTCCGA...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCCTCCCCGGCTCTCTaGAGGTGCCCACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEASPAL*RCPPEF
Trigger: AAACTCTGGTGGGCACCTGCAGAGAGCCGGGGAGGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGGGGCACCTTGGTGTTaGTGGTGGCCCCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEGAPWC*WWPQLV
Trigger: TACCAGCTGGGGCCACCAGCAACACCAAGGTGCCCC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGGCTGGACTGCCCATTaGTCCCTGGACCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCGWTAH*SLDLGA
Trigger: AGCCCCGAGGTCCAGGGAGCAATGGGCAGTCCAGCC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCCCCCTGTTCTGCAGTaGCTGGAAAAGGGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGPPVLQ*LEKGPV
Trigger: CACCGGACCCTTTTCCAGGCACTGCAGAACAGGGGG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCTCACACCATAGGCTaGCCAGAGCTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEAHTIG*PELGLQ
Trigger: CTGGAGCCCCAGCTCTGGGCAGCCTATGGTGTGAGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTTCTAGGGCCGCAGGTTaGAGGGGTCGGACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCSRAAG*RGRTPG
Trigger: TCCCGGAGTCCGACCCCTCCAACCTGCGGCCCTAGA...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGGGAAGCCAGGAGTCTaGGGTGCTCAGGACGCCCCT +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCGKPGV*GAQDAP
Trigger: AGGGGCGTCCTGAGCACCCCAGACTCCTGGCTTCCC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCAGGGGCCAGTCACATaGATGCTCTGGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCQGPVT*MLWGQA
Trigger: GGCCTGCCCCCAGAGCATCCATGTGACTGGCCCCTG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGAGGCAGAGGGCACTTTaGGCTGGCCCCCGGAGTATA +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGRQRAL*AGPRSI
Trigger: TATACTCCGGGGGCCAGCCCAAAGTGCCCTCTGCCT...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCTGGTGGCCCCAGCTaGTACCCAAGGTTCCCATCG +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEAGGPS*YPRFPS
Trigger: CGATGGGAACCTTGGGTACCAGCTGGGGCCACCAGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGTGCCTCCAGTGCTCCTaGAAGAGGTGGAAGCCACGC +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGCLQCS*KRWKPR
Trigger: GCGTGGCTTCCACCTCTTCCAGGAGCACTGGAGGCA...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACTCAGCGCCTGCACCTaGCCTCCAAGTGCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKELSACT*PPSAPR
Trigger: TCTTGGGGCACTTGGAGGCCAGGTGCAGGCGCTGAG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACGGAGGAGTGGGGATTaGAGGAAGTCAATTGCCCCC +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRRRSGD*RKSIAP
Trigger: GGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGGGCTGTTTGTCTCCTaGGTCTCGGAGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGGLFVS*VSEEWG
Trigger: TCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGCTCCGAGTGCCGTGTaGGCCATGTCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGAPSAV*AMSSSA
Trigger: AGCTGAAGAAGACATGGCTCACACGGCACTCGGAGC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGTTTTCTGTGTTaGTTCCTTCTGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRGRFLC*FLLLAC
Trigger: GCAGGCCAGCAGAAGGAATCAACACAGAAAACGCCC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGATGTCCAGGATGTTGGTaGTGCGGTCATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRCPGCW*CGHHWA
Trigger: TGCCCAGTGATGACCGCATCACCAACATCCTGGACA...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCATGCACCAGGATGCTaGCCAGGTCGGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCHAPGC*PGRPPP
Trigger: TGGAGGTGGCCGACCTGGTCAGCATCCTGGTGCATG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGAAGTTGTGCCTGGGCTaGGCACCTGGTCTACCTGTC +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGKLCLG*APGLPV
Trigger: GACAGGTAGACCAGGTGCTCAGCCCAGGCACAACTT...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTTCTCCCAGGTTGGGGTaGCCTTCAGGAAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCSPRLG*PSGSWA
Trigger: CGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGA...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCTCCTGTCTCACGATaGCGTTCTCTGGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEAPVSR*RSLGPS
Trigger: AGACGGCCCCAGAGAACGGCATCGTGAGACAGGAGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGTGCAGCAGCGTGGAATaGCTGGGCTGTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGCSSVE*LGCPLS
Trigger: TGACAGAGGACAGCCCAGGCATTCCACGCTGCTGCA...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACCAGACCTGGTGCATTaGAGTGCTCAGCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRPDLVH*SAQLCQ
Trigger: TTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACCTCCCAGAATGTTGTaGTGCCCAGGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEPPRML*CPGCWA
Trigger: AGCCCAGCAGCCTGGGCAGCACAACATTCTGGGAGG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCCCCAGCTCCGGGCTaGCCTACTCCATTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEAPAPG*PTPFVS
Trigger: AGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCGTCTTCTCCCAGGTTaGGGTGCCCTTCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGRLLPG*GALQEA
Trigger: AGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACTGTTCTGCAGTGCCTaGAAAAGGGTCCGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKELFCSA*KRVRWP
Trigger: CGGCCACCGGACCCTTTTCCAGGCACTGCAGAACAG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGGCCTTCCTCAGAGCTaGAGTTGGTGGCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRGLPQS*SWWLCL
Trigger: AAGACACAGCCACCAACTCCAGCTCTGAGGAAGGCC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCCCAGGGCTTTCTCCTaGATCTTCCGTTCCACCACC +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGPRAFS*IFRSTT
Trigger: GGTGGTGGAACGGAAGATCCAGGAGAAAGCCCTGGG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACCGGCTCTCTGCAGGTaGCCACCAGAGTTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEPALCR*PPEFKP
Trigger: TGGCTTAAACTCTGGTGGGCACCTGCAGAGAGCCGG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGATTGACCCAGACCTGGTaGATTGCAGTGCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRLTQTW*IAVLSS
Trigger: AGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAA...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCACGATGCCGTTCTCTaGGGCCGTCTTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCHDAVL*GRLLPG
Trigger: ACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGATGGCTGGAGACAAACTaGGTCAGCATCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRWLETN*VSIREQ
Trigger: CTGTTCCCTGATGCTGACCCAGTTTGTCTCCAGCCA...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTTGCCTCCAGTGCTCCTaGAAGAGGTGGAAGCCACGC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCCLQCS*KRWKPR
Trigger: GCGTGGCTTCCACCTCTTCCAGGAGCACTGGAGGCA...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGACGTTGCCAAGAGTATaGACAAGGCCTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGTLPRV*TRPGGQ
Trigger: TTGTCCCCCAGGCCTTGTTCATACTCTTGGCAACGT...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGATGGCCACCACTATaGTCAGGCATCAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCRWPPL*SGIRGP
Trigger: TGGCCCCCTGATGCCTGAGCATAGTGGTGGCCATCT...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGTCAAACTGCTCCGAGTaGCGTGTGAGCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGSNCSE*RVSHVF
Trigger: GAAGACATGGCTCACACGGCACTCGGAGCAGTTTGA...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTTGCAGTGCTCAGCTCTaGCAAAGCCTGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCCSAQL*QSLAGD
Trigger: GTCTCCAGCCAGGCTTTGGCAGAGCTGAGCACTGCA...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACCTGGTGCATTGCAGTaGTCAGCTCTGCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEPGALQ*SALPKP
Trigger: AGGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGTGTGGGTGTCGCCATTaGAGGAAGGTTGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGCGCRH*RKVVEL
Trigger: CAACTCCACAACCTTCCTGCAATGGCGACACCCACA...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTTGTTCAGCATGCCTaGAGTGAGCCCAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGLVQHA*SEPSED
Trigger: ATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAATGCCCTTCAGGAAGCTaGGCGTACTCTCCATCACTC +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKECPSGS*AYSPSL
Trigger: GAGTGATGGAGAGTACGCCCAGCTTCCTGAAGGGCA...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCGTCTTCTCCCAGGTTaGGGTGCCCTTCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCRLLPG*GALQEA
Trigger: AGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGGGTCACTCTTGAGATaGCCACCACTATGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEGSLLR*PPLCSG
Trigger: GCCTGAGCATAGTGGTGGCCATCTCAAGAGTGACCC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACAGAGCTGGAGTTGGTaGCTGTGTCTTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEQSWSW*LCLPPA
Trigger: AGCAGGAGGAAGACACAGCCACCAACTCCAGCTCTG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCGGGGACATCGCCAGTaGGTGTTGAAGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCRGHRQ*VLKSPW
Trigger: CCATGGACTCTTCAACACCCACTGGCGATGTCCCCG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACTGCCAAAGCCTGGCTaGAGACAAACTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKELPKPG*RQTGSA
Trigger: TGCTGACCCAGTTTGTCTCCAGCCAGGCTTTGGCAG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGATGCTCTTGGTCCTGTaGGTGTCGCCATTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGMLLVL*VSPLQE
Trigger: TTCCTGCAATGGCGACACCCACAGGACCAAGAGCAT...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGGTTCTCCACCCTGCTaGTGTCCTCATCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCGSPPC*CPHPPK
Trigger: CTTTGGGGGATGAGGACACCAGCAGGGTGGAGAACC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGCACAACTTTGGCATTaGGCCAGTTTTGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGAQLWH*ASFAGR
Trigger: TCTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTTGTCCAGGATGTTGGTaGTGCGGTCATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCCPGCW*CGHHWA
Trigger: TGCCCAGTGATGACCGCATCACCAACATCCTGGACA...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGCCCAGCCCAGACGTTaGCAAGAGTATGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCAQPRR*QEYEQG
Trigger: GCCTTGTTCATACTCTTGGCAACGTCTGGGCTGGGC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCGTGGACATTCAAACTaGTCCGAGTGCCGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCRGHSN*SECRVS
Trigger: GCTCACACGGCACTCGGAGCAGTTTGAATGTCCACG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACCGTTCCACCACCTGTaGGATAATGCTGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEPFHHL*DNAVQD
Trigger: ATCCTGGACAGCATTATCGCACAGGTGGTGGAACGG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTTGCCCTTCAGGAAGCTaGGCGTACTCTCCATCACTC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCCPSGS*AYSPSL
Trigger: GAGTGATGGAGAGTACGCCCAGCTTCCTGAAGGGCA...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCAGAATGCCAGCGGATaGGTAAGCATGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCQNASG*VSMASF
Trigger: GAAGGAGGCCATGCTTACCCATCCGCTGGCATTCTG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTCTCGCTCCAGGATCTTaGTCTCCAGAAGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCLAPGS*SPEGKG
Trigger: GCCCTTTCCTTCTGGAGACCAAGATCCTGGAGCGAG...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCTCCTTTGCCAACCTaGGAATGCTCGGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEAPLPT*ECSDPC
Trigger: ACAAGGATCCGAGCATTCCCAGGTTGGCAAAGGAGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAAGGTTGAGTTTTCCATaGAGGGCGCAGTACTCCGGA +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKERLSFP*RAQYSG
Trigger: TCCGGAGTACTGCGCCCTCCATGGAAAACTCAACCT...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR TCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTGCACAACTTTGGCATTaGGCCAGTTTTGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCAQLWH*ASFAGR
Trigger: TCTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGC...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR GCA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAATTGCCAACCTGGGAATaGTCGGATCCTTGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKELPTWE*SDPCSK
Trigger: TTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAA...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CCA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTATGTGTATTCGCTCATaGCCCAAGCAGAGTTTGACC +
Preference number: 4 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCMCIRS*PKQSLT
Trigger: GGTCAAACTCTGCTTGGGCCATGAGCGAATACACAT...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp ACGGCGCGGATCGGCCGCACCAGCTTCTGGGCCGAGGCCGTAGGTTaGGCCATGGGACGCCGAGACTCCGTGCTGCGCCGCGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: TARIGRTSFWAEAVG*AMGRRDSVLRRGEG
Trigger: GCCCTCCCCGCGGCGCAGCACGGAGTCTCGGCGTCCCATGGCGCAACCTACGGCCTCGGCCCAGAAGCTGGTGCGGCCGATCCGCGCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp TCTAGGGCCGCAGGTTGGAGGGGTCGGACTCCGGGATCTGCAGGATaGGGCACACGGCGCGGATCGGCCGCACCAGCTTCTGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: SRAAGWRGRTPGSAG*GTRRGSAAPASGPR
Trigger: CCTCGGCCCAGAAGCTGGTGCGGCCGATCCGCGCCGTGTGCCGCATCCTGCAGATCCCGGAGTCCGACCCCTCCAACCTGCGGCCCTAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp CTCCGCAGCAGGCGGCACAGTCGGTCCCCCAAACCACTGAGCAGGTaGTTGGCGAGGCCTGTGCTGAGCCGGCTGTCAGGGCCGGACCCT +
Preference number: 5 (lower is better)
Translates to: LRSRRHSRSPKPLSR*LARPVLSRLSGPDP
Trigger: AGGGTCCGGCCCTGACAGCCGGCTCAGCACAGGCCTCGCCAAGCACCTGCTCAGTGGTTTGGGGGACCGACTGTGCCGCCTGCTGCGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp ATCTGCAGGATGCGGCACACGGCGCGGATCGGCCGCACCAGCTTCTaGGCCGAGGCCGTAGGTTGCGCCATGGGACGCCGAGACTCCGTG +
Preference number: 5 (lower is better)
Translates to: ICRMRHTARIGRTSF*AEAVGCAMGRRDSV
Trigger: CACGGAGTCTCGGCGTCCCATGGCGCAACCTACGGCCTCGGCCCAGAAGCTGGTGCGGCCGATCCGCGCCGTGTGCCGCATCCTGCAGAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp CGCTGGGCGTCCTGTGCCCGGAACACGTGCCACACAGTGCTGACCTaGCTGCCCGGAGACCAGAGCCCCTCCCCGTCCAGGCCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: RWASCARNTCHTVLT*LPGDQSPSPSRPER
Trigger: CCTTTCAGGCCTGGACGGGGAGGGGCTCTGGTCTCCGGGCAGCCAGGTCAGCACTGTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522039.1
ENST00000680789.1
CDS CCA 90 bp CCTGCCCCGGCCGGGCACACCATCTGGAGAAAGCGGCGGATGCGCTaGGCGTCCTGTGCCCGGAACACGTGCCACACAGTGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: PAPAGHTIWRKRRMR*ASCARNTCHTVLTW
Trigger: CCAGGTCAGCACTGTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCCAGATGGTGTGCCCGGCCGGGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGGGCTGGACTGCCCATaGCTCCCTGGACCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPGLDCP*LPGPRG
Trigger: GCCCCGAGGTCCAGGGAGCAATGGGCAGTCCAGCCC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGTGGTGTCCTGTCCCTaGGGCCCCAGCTCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPVVSCP*GPSSGL
Trigger: CAGCCCGGAGCTGGGGCCCAAGGGACAGGACACCAC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp ACGCCCCTCCAAAAGGGAGCAGGCTCTCCCAGGCACAGCGGCCCATaGTGCAGTCCATCTCGAGGCGGGCTGCCGGGCTCCTGTCTCACG +
Preference number: 5 (lower is better)
Translates to: TPLQKGAGSPRHSGP*CSPSRGGLPGSCLT
Trigger: CGTGAGACAGGAGCCCGGCAGCCCGCCTCGAGATGGACTGCACCATGGGCCGCTGTGCCTGGGAGAGCCTGCTCCCTTTTGGAGGGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS-3UTR CAA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGGGGCTGCCTGCCCTTTaGAGGGCCCGGAGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGGLPAL*RARSRA
Trigger: TGCTCGGCTCCGGGCCCTCAAAAGGGCAGGCAGCCC...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGTGGTGTCCTGTCCCTaGGGCCCCAGCTCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCVVSCP*GPSSGL
Trigger: CAGCCCGGAGCTGGGGCCCAAGGGACAGGACACCAC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp CTCCCAGGCACAGCGGCCCATGGTGCAGTCCATCTCGAGGCGGGCTaGCGGGCTCCTGTCTCACGATGCCGTTCTCTGGGGCCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LPGTAAHGAVHLEAG*RAPVSRCRSLGPSS
Trigger: AGAAGACGGCCCCAGAGAACGGCATCGTGAGACAGGAGCCCGGCAGCCCGCCTCGAGATGGACTGCACCATGGGCCGCTGTGCCTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS GCA 90 bp CCCCTCCAAAAGGGAGCAGGCTCTCCCAGGCACAGCGGCCCATGGTaGAGTCCATCTCGAGGCGGGCTGCCGGGCTCCTGTCTCACGATG +
Preference number: 5 (lower is better)
Translates to: PLQKGAGSPRHSGPW*SPSRGGLPGSCLTM
Trigger: CATCGTGAGACAGGAGCCCGGCAGCCCGCCTCGAGATGGACTGCACCATGGGCCGCTGTGCCTGGGAGAGCCTGCTCCCTTTTGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS GCA 90 bp AGGCATCAGGGGGCCACAGCGAGGTGGGCACGCTGGCCCGCAGAATaGCAGCGGATGGGTAAGCATGGCCTCCTTCCAGCGCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RHQGATARWARWPAE*QRMGKHGLLPAQSL
Trigger: GAGGGACTGCGCTGGAAGGAGGCCATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCGCTGTGGCCCCCTGATGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 90 bp GGGCCACAGCGAGGTGGGCACGCTGGCCCGCAGAATGCCAGCGGATaGGTAAGCATGGCCTCCTTCCAGCGCAGTCCCTCTTTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GPQRGGHAGPQNASG*VSMASFQRSPSLLP
Trigger: GGGCAGCAAAGAGGGACTGCGCTGGAAGGAGGCCATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCGCTGTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 90 bp CTGGGTGACAGGCGGCTCAGGAGAGGGGCACCTTGGTGTTGCTGGTaGCCCCAGCTGGTACCCAAGGTTCCCATCGCCTGGCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: LGDRRLRRGAPWCCW*PQLVPKVPIAWPSP
Trigger: TGGGCTGGGCCAGGCGATGGGAACCTTGGGTACCAGCTGGGGCCACCAGCAACACCAAGGTGCCCCTCTCCTGAGCCGCCTGTCACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp GCCCGCCCAGTGCCTGCCACACGACCACAGGCCACACACAGCCGGTaGCTGCAGCGGGGACATCGCCAGTGGGTGTTGAAGAGTCCATGG +
Preference number: 5 (lower is better)
Translates to: ARPVPATRPQATHSR*LQRGHRQWVLKSPW
Trigger: CCATGGACTCTTCAACACCCACTGGCGATGTCCCCGCTGCAGCCACCGGCTGTGTGTGGCCTGTGGTCGTGTGGCAGGCACTGGGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp GCTCCCGGCTGCCTCCTCACCATCTGGAGAAAGCGGCGGATGCGCTaGGCGTCCTGTGCCCGGAACACGTGCCACACAGTGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: APGCLLTIWRKRRMR*ASCARNTCHTVLTW
Trigger: CCAGGTCAGCACTGTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCCAGATGGTGAGGAGGCAGCCGGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522039.1
CDS-3UTR CAA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGTCGGAGATGGCCGAGTaGGGGGAAAGGCCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGSEMAE*GERPRG
Trigger: GCCCCTCGGCCTTTCCCCCAACTCGGCCATCTCCGA...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGGGGTCCGGTGGCCGCTaGGGGGCTGGACTGCCCATT +
Preference number: 5 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLGSGGR*GAGLPI
Trigger: AATGGGCAGTCCAGCCCCCAAGCGGCCACCGGACCC...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTGGGGCGGACTGGAGCTaGCTGGGTGGAGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRGADWS*LGGVGL
Trigger: GAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCC...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp GGTGCAGTCCATCTCGAGGCGGGCTGCCGGGCTCCTGTCTCACGATaGCGTTCTCTGGGGCCGTCTTCTCCCAGGTTGGGGTGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: GAVHLEAGCRAPVSR*RSLGPSSPRLGCPS
Trigger: TGAAGGGCACCCCAACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTGAGACAGGAGCCCGGCAGCCCGCCTCGAGATGGACTGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 90 bp ATCTCGAGGCGGGCTGCCGGGCTCCTGTCTCACGATGCCGTTCTCTaGGGCCGTCTTCTCCCAGGTTGGGGTGCCCTTCAGGAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: ISRRAAGLLSHDAVL*GRLLPGWGALQEAG
Trigger: CCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTGAGACAGGAGCCCGGCAGCCCGCCTCGAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 90 bp GGGCAAGGATTCTGCTGCCGGCCAGCTCCCATCTCTCCATCCCTCTaGTGCAGTGAAGGGCGTTCGGCCTCCCCGGCTCTCTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: GQGFCCRPAPISPSL*CSEGRSASPALCRC
Trigger: GCACCTGCAGAGAGCCGGGGAGGCCGAACGCCCTTCACTGCACCAGAGGGATGGAGAGATGGGAGCTGGCCGGCAGCAGAATCCTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS CCA 90 bp GTGCTTGGCGAGGCCTGTGCTGAGCCGGCTGTCAGGGCCGGACCCTaGGCCTTCCTCAGAGCTGGAGTTGGTGGCTGTGTCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VLGEACAEPAVRAGP*AFLRAGVGGCVFLL
Trigger: CAGGAGGAAGACACAGCCACCAACTCCAGCTCTGAGGAAGGCCCAGGGTCCGGCCCTGACAGCCGGCTCAGCACAGGCCTCGCCAAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGGGCTGGACTGCCCATaGCTCCCTGGACCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPGLDCP*LPGPRG
Trigger: GCCCCGAGGTCCAGGGAGCAATGGGCAGTCCAGCCC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCCACTGAGCAGGTGCTaGGCGAGGCCTGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRPLSRC*ARPVLS
Trigger: GCTCAGCACAGGCCTCGCCAAGCACCTGCTCAGTGG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS TCA 90 bp CCCGGTGCCAGGCAGGCAGTGGTGTGTCGGCATGCACCAGGATGCTaGCCAGGTCGGCCACCTCCACACAGAGGTTCTTGGTCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: PGARQAVVCRHAPGC*PGRPPPHRGSWSPG
Trigger: ACCTGGGGACCAAGAACCTCTGTGTGGAGGTGGCCGACCTGGTCAGCATCCTGGTGCATGCCGACACACCACTGCCTGCCTGGCACCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522039.1
ENST00000680789.1
CDS GCA 90 bp CAAGGATTCTGCTGCCGGCCAGCTCCCATCTCTCCATCCCTCTGGTaGAGTGAAGGGCGTTCGGCCTCCCCGGCTCTCTGCAGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: QGFCCRPAPISPSLW*SEGRSASPALCRCP
Trigger: TGGGCACCTGCAGAGAGCCGGGGAGGCCGAACGCCCTTCACTGCACCAGAGGGATGGAGAGATGGGAGCTGGCCGGCAGCAGAATCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS GCA 90 bp ACTGGGTCAGCATCAGGGAACAGGCAGCGTGCCCGGCCTCCTGCGTaGACTCCTCCGCGGACTGCTCCTGAAAGCCTGCTTTCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: TGSASGNRQRARPPA*TPPRTAPESLLSPW
Trigger: CCAGGGAGAAAGCAGGCTTTCAGGAGCAGTCCGCGGAGGAGTGCACGCAGGAGGCCGGGCACGCTGCCTGTTCCCTGATGCTGACCCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp GGTCCCCTCTGCCTTCTCTGCACCTGTCTGTGCGAGTTGGGTCTGTaGAGCTCACCTGAGGGCGTGGGGCAGGGAGCGAGCACATGGGAC +
Preference number: 5 (lower is better)
Translates to: GPLCLLCTCLCELGL*SSPEGVGQGASTWD
Trigger: GTCCCATGTGCTCGCTCCCTGCCCCACGCCCTCAGGTGAGCTGCACAGACCCAACTCGCACAGACAGGTGCAGAGAAGGCAGAGGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522039.1
CDS CCA 90 bp GAGATGGCCACCACTATGCTCAGGCATCAGGGGGCCACAGCGAGGTaGGCACGCTGGCCCGCAGAATGCCAGCGGATGGGTAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: EMATTMLRHQGATAR*ARWPAECQRMGKHG
Trigger: GCCATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCGCTGTGGCCCCCTGATGCCTGAGCATAGTGGTGGCCATCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 90 bp GTTGAAGAGTCCATGGTGGCAACGGCTGCAGCAGCGTGGAATGCCTaGGCTGTCCTCTGTCACGGCTGGCCCTTGGCCTTCCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VEESMVATAAAAWNA*AVLCHGWPLAFPLG
Trigger: GCCCAGCGGGAAGGCCAAGGGCCAGCCGTGACAGAGGACAGCCCAGGCATTCCACGCTGCTGCAGCCGTTGCCACCATGGACTCTTCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCAGCGCAGTCCCTCTTaGCTGCCCAGCCAGTTGACC +
Preference number: 5 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGQRSPS*LPSQLT
Trigger: GGTCAACTGGCTGGGCAGCAAAGAGGGACTGCGCTG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCTGGGGCCAGAGGCCTaGTTCACTTCCTCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCLGPEA*FTSSLG
Trigger: ACCCAGCGAGGAAGTGAACAAGGCCTCTGGCCCCAG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGGGTCCGGTGGCCGCTaGGGGGCTGGACTGCCCATT +
Preference number: 5 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGGSGGR*GAGLPI
Trigger: AATGGGCAGTCCAGCCCCCAAGCGGCCACCGGACCC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTGGGTCCGGTGGCCGCTaGGGGGCTGGACTGCCCATT +
Preference number: 5 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLGSGGR*GAGLPI
Trigger: AATGGGCAGTCCAGCCCCCAAGCGGCCACCGGACCC...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTACCCGGGCATCAGCTaGGCAGGGGCAGTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLYPGIS*AGAVPP
Trigger: CGGGGGCACTGCCCCTGCCAAGCTGATGCCCGGGTA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATACCCGGGCATCAGCTaGGCAGGGGCAGTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: APGLCLACSCTQEHLWGTYPGIS*AGAVPP
Trigger: CGGGGGCACTGCCCCTGCCAAGCTGATGCCCGGGTA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGGTCATCACTGGGCAGGGCCGGAGTGACGGGGGCGAAGGCCATGTGTATTCGCAGCCCTCGTCTGACTTaGGGCGAAGCTCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RSSLGRAGVTGAKAMCIRSPRLT*GEAQAR
Trigger: CCTGGCCTGAGCTTCGCCCAAAGTCAGACGAGGGCT...GCGAATACACATGGCCTTCGCCCCCGTCACTCCGGCCCTGCCCAGTGATGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGTCCACACAGAGGTTCTaGGTCCCCAGGTGTCCCCGG +
Preference number: 5 (lower is better)
Translates to: ARESLHREVTSWLCPRTLSTQRF*VPRCPR
Trigger: CCGGGGACACCTGGGGACCAAGAACCTCTGTGTGGA...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCATTGGAGGAAGTCAATaGCCCCCAGTGCGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPIGGSQ*PPVRAW
Trigger: CCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAAT...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCAGGAGGGCAGAAGGTaGGAGGCCCCTTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPQEGRR*EAPCSA
Trigger: TGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCTG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS TCA 90 bp GCGGCTAATGGAGGTAGAGCGCGGCGGAGAGCGCAGCAGGACCTCTaGTCGCCATCGCCAGAAGCGCAACTGAGAGTGGGGAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: AANGGRARRRAQQDL*SPSPEAQLRVGKLL
Trigger: GAGCAGCTTCCCCACTCTCAGTTGCGCTTCTGGCGATGGCGATCAGAGGTCCTGCTGCGCTCTCCGCCGCGCTCTACCTCCATTAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312841.9
ENST00000680789.1
CDS TCA 90 bp GCATGGCCTCCTTCCAGCGCAGTCCCTCTTTGCTGCCCAGCCAGTTaGCCTTCCTCTCCCCATTCTGGGGGCCCTCGCCCTCCACAAGTG +
Preference number: 5 (lower is better)
Translates to: AWPPSSAVPLCCPAS*PSSPHSGGPRPPQV
Trigger: CACTTGTGGAGGGCGAGGGCCCCCAGAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCAAAGAGGGACTGCGCTGGAAGGAGGCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS TCA 90 bp CCAAGGTTCCCATCGCCTGGCCCAGCCCAGACGTTGCCAAGAGTATaGACAAGGCCTGGGGGACAAGCGGGCCAGGAGGTCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: PRFPSPGPAQTLPRV*TRPGGQAGQEVQGT
Trigger: TGTGCCCTGGACCTCCTGGCCCGCTTGTCCCCCAGGCCTTGTTCATACTCTTGGCAACGTCTGGGCTGGGCCAGGCGATGGGAACCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS TCA 90 bp GGAGAGCGCAGCAGGACCTCTGATCGCCATCGCCAGAAGCGCAACTaGGAGTGGGGAAGCTGCTCCGCCGGTTTCCTCCTCCAGCACCCT +
Preference number: 5 (lower is better)
Translates to: GERSRTSDRHRQKRN*EWGSCSAGFLLQHP
Trigger: AGGGTGCTGGAGGAGGAAACCGGCGGAGCAGCTTCCCCACTCTCAGTTGCGCTTCTGGCGATGGCGATCAGAGGTCCTGCTGCGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680789.1
CDS CCA 90 bp ACCACTATGCTCAGGCATCAGGGGGCCACAGCGAGGTGGGCACGCTaGCCCGCAGAATGCCAGCGGATGGGTAAGCATGGCCTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: TTMLRHQGATARWAR*PAECQRMGKHGLLP
Trigger: TGGAAGGAGGCCATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCGCTGTGGCCCCCTGATGCCTGAGCATAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATCGGAGATGGCCGAGTaGGGGGAAAGGCCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: APGLCLACSCTQEHLWGTSEMAE*GERPRG
Trigger: GCCCCTCGGCCTTTCCCCCAACTCGGCCATCTCCGA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGCCACAGGGTCACTCTaGAGATGGCCACCACTATGC +
Preference number: 5 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPATGSL*RWPPLC
Trigger: GCATAGTGGTGGCCATCTCAAGAGTGACCCTGTGGC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCATTGGAGGAAGTCAATaGCCCCCAGTGCGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCIGGSQ*PPVRAW
Trigger: CCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAAT...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCAGGAGGGCAGAAGGTaGGAGGCCCCTTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: ARESLHREVTSWLCPRTLQEGRR*EAPCSA
Trigger: TGCTGAACAAGGGGCCTCCAACCTTCTGCCCTCCTG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS TCA 90 bp CCAGTGGACGCAGGGCAAGGCCCGGTGGGAGGTAGGAAGCCAGGTTaGGTTTTCCATGGAGGGCGCAGTACTCCGGAAGTGGCAGACTGG +
Preference number: 5 (lower is better)
Translates to: PVDAGQGPVGGRKPG*VFHGGRSTPEVADW
Trigger: CCAGTCTGCCACTTCCGGAGTACTGCGCCCTCCATGGAAAACTCAACCTGGCTTCCTACCTCCCACCGGGCCTTGCCCTGCGTCCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp CTCTGGTGCAGTGAAGGGCGTTCGGCCTCCCCGGCTCTCTGCAGGTaGCCACCAGAGTTTAAGCCAAACAACCCAGGTTCCGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LWCSEGRSASPALCR*PPEFKPNNPGSAAA
Trigger: GGCAGCTGCGGAACCTGGGTTGTTTGGCTTAAACTCTGGTGGGCACCTGCAGAGAGCCGGGGAGGCCGAACGCCCTTCACTGCACCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS CCA 90 bp CCGGAGCCGAGCAACCGGCCTCTCCTCGACCTCAGGGCAGCCGCGTaGACATTCAAACTGCTCCGAGTGCCGTGTGAGCCATGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: PEPSNRPLLDLRAAA*TFKLLRVPCEPCLL
Trigger: AAGAAGACATGGCTCACACGGCACTCGGAGCAGTTTGAATGTCCACGCGGCTGCCCTGAGGTCGAGGAGAGGCCGGTTGCTCGGCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp TGGCTGCAGCGGGGACATCGCCAGTGGGTGTTGAAGAGTCCATGGTaGCAACGGCTGCAGCAGCGTGGAATGCCTGGGCTGTCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: WLQRGHRQWVLKSPW*QRLQQRGMPGLSSV
Trigger: GACAGAGGACAGCCCAGGCATTCCACGCTGCTGCAGCCGTTGCCACCATGGACTCTTCAACACCCACTGGCGATGTCCCCGCTGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp GAGAGAAGGACAAGGCAGGGGCCCTCGGCCAGCACGGTCCTCTGCTaGGGTCTCAGCGGAATCGGGGGTCTCCTCTTTGATGCTCTTGGT +
Preference number: 5 (lower is better)
Translates to: ERRTRQGPSASTVLC*GLSGIGGLLFDALG
Trigger: ACCAAGAGCATCAAAGAGGAGACCCCCGATTCCGCTGAGACCCCAGCAGAGGACCGTGCTGGCCGAGGGCCCCTGCCTTGTCCTTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000517699.2
ENST00000518461.2
ENST00000680789.1
CDS-3UTR CAA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTCGGAGATGGCCGAGTaGGGGGAAAGGCCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: VQHACSEPSEDAVVETELSEMAE*GERPRG
Trigger: GCCCCTCGGCCTTTCCCCCAACTCGGCCATCTCCGA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGTTGCTGCCCAGCCAGTaGACCTTCCTCTCCCCATTC +
Preference number: 5 (lower is better)
Translates to: ARESLHREVTSWLCPRTLLLPSQ*TFLSPF
Trigger: GAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCAA...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGCCACAGGGTCACTCTaGAGATGGCCACCACTATGC +
Preference number: 5 (lower is better)
Translates to: ARESLHREVTSWLCPRTLATGSL*RWPPLC
Trigger: GCATAGTGGTGGCCATCTCAAGAGTGACCCTGTGGC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAAGGGGCACCTTGGTGTaGCTGGTGGCCCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: APGLCLACSCTQEHLWGTRGTLV*LVAPAG
Trigger: ACCAGCTGGGGCCACCAGCAACACCAAGGTGCCCCT...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATCAGGAGAGGGGCACCTaGGTGTTGCTGGTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADQERGT*VLLVAP
Trigger: TGGGGCCACCAGCAACACCAAGGTGCCCCTCTCCTG...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCGGGCTGGACTGCCCATaGCTCCCTGGACCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: QLRAALLHLSLRQISMSPGLDCP*LPGPRG
Trigger: GCCCCGAGGTCCAGGGAGCAATGGGCAGTCCAGCCC...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCCACTGAGCAGGTGCTaGGCGAGGCCTGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLPLSRC*ARPVLS
Trigger: GCTCAGCACAGGCCTCGCCAAGCACCTGCTCAGTGG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCCACTGAGCAGGTGCTaGGCGAGGCCTGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRPLSRC*ARPVLS
Trigger: GCTCAGCACAGGCCTCGCCAAGCACCTGCTCAGTGG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCATCGCCAGTGGGTGTaGAAGAGTCCATGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPHRQWV*KSPWWQ
Trigger: TTGCCACCATGGACTCTTCAACACCCACTGGCGATG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGATACCCGGGCATCAGCTaGGCAGGGGCAGTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGYPGIS*AGAVPP
Trigger: CGGGGGCACTGCCCCTGCCAAGCTGATGCCCGGGTA...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCTGTGGGTGTCGCCATaGCAGGAAGGTTGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPLWVSP*QEGCGV
Trigger: AACTCCACAACCTTCCTGCAATGGCGACACCCACAG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAAGCCCTCCCAGAATGTaGTGCTGCCCAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPSPPRM*CCPGCW
Trigger: CCAGCAGCCTGGGCAGCACAACATTCTGGGAGGGCT...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGGCCACCTTCACTGCTaGGAACACAGCCCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: ARESLHREVTSWLCPRTLGHLHC*EHSPVH
Trigger: ATGGACTGGGCTGTGTTCCAAGCAGTGAAGGTGGCC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCAACAGAGTGCCCTGCTaGTGCCCAGAGTGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCNRVPC*CPEWCL
Trigger: CAAGCACCACTCTGGGCACAAGCAGGGCACTCTGTT...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp GTCTCACGATGCCGTTCTCTGGGGCCGTCTTCTCCCAGGTTGGGGTaGCCTTCAGGAAGCTGGGCGTACTCTCCATCACTCTCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: VSRCRSLGPSSPRLG*PSGSWAYSPSLSCP
Trigger: AGGGCAGGAGAGTGATGGAGAGTACGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS GCA 90 bp CCATCCCTCTGGTGCAGTGAAGGGCGTTCGGCCTCCCCGGCTCTCTaGAGGTGCCCACCAGAGTTTAAGCCAAACAACCCAGGTTCCGCA +
Preference number: 5 (lower is better)
Translates to: PSLWCSEGRSASPAL*RCPPEFKPNNPGSA
Trigger: TGCGGAACCTGGGTTGTTTGGCTTAAACTCTGGTGGGCACCTGCAGAGAGCCGGGGAGGCCGAACGCCCTTCACTGCACCAGAGGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS CCA 90 bp GATGCTCTGGGGGCAGGCCAGACACTAGGTAGGGTGGCAAGCAGGTaGGCACCCAGAAGGGAGCTCGCTCCAGGATCTTGGTCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: DALGAGQTLGRVASR*APRRELAPGSWSPE
Trigger: TTCTGGAGACCAAGATCCTGGAGCGAGCTCCCTTCTGGGTGCCCACCTGCTTGCCACCCTACCTAGTGTCTGGCCTGCCCCCAGAGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCCGTCTTCTCCCAGGTaGGGGTGCCCTTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGPSSPR*GCPSGS
Trigger: GCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGTTGCTGCCCAGCCAGTaGACCTTCCTCTCCCCATTC +
Preference number: 5 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLLLPSQ*TFLSPF
Trigger: GAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCAA...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCAGCGCAGTCCCTCTTaGCTGCCCAGCCAGTTGACC +
Preference number: 5 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLQRSPS*LPSQLT
Trigger: GGTCAACTGGCTGGGCAGCAAAGAGGGACTGCGCTG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACACTGGGGCCAGAGGCCTaGTTCACTTCCTCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: APGLCLACSCTQEHLWGTLGPEA*FTSSLG
Trigger: ACCCAGCGAGGAAGTGAACAAGGCCTCTGGCCCCAG...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGACTGGCCTGGCCATCTaGGGGTCCTTTCTGCTCATC +
Preference number: 5 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLTGLAI*GSFLLI
Trigger: GATGAGCAGAAAGGACCCCAAGATGGCCAGGCCAGT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCGGCACAACTTTGGCATaGAGCCAGTTTTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPGTTLA*SQFCRE
Trigger: CTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGCC...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCGTCATCGCCAGTGGGTGTaGAAGAGTCCATGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: RYTKEAGEGGAPPGGCGRHRQWV*KSPWWQ
Trigger: TTGCCACCATGGACTCTTCAACACCCACTGGCGATG...ACGCCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGCCATTGCAGGAAGGTaGTGGAGTTGGGGGCGTTTT +
Preference number: 5 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCAIAGR*WSWGRF
Trigger: AAAACGCCCCCAACTCCACAACCTTCCTGCAATGGC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCTGTGGGTGTCGCCATaGCAGGAAGGTTGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGLWVSP*QEGCGV
Trigger: AACTCCACAACCTTCCTGCAATGGCGACACCCACAG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCATGGCCCAAGCAGAGTTaGACCGCGGTAGAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPWPKQS*TAVEAS
Trigger: GCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCA...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGAGCCCTCCCAGAATGTaGTGCTGCCCAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRSPPRM*CCPGCW
Trigger: CCAGCAGCCTGGGCAGCACAACATTCTGGGAGGGCT...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCAGCCCTCGTCTGACTTaGGGCGAAGCTCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGSPRLT*GEAQAR
Trigger: CCTGGCCTGAGCTTCGCCCAAAGTCAGACGAGGGCT...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGAGCCCTCGTCTGACTTaGGGCGAAGCTCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRSPRLT*GEAQAR
Trigger: CCTGGCCTGAGCTTCGCCCAAAGTCAGACGAGGGCT...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GACATCGCCCATGCCGCTCCCTCCGCCAAGCCTGAGCAGCTCCTGATGCCACCCCTAGCATCCCTCTATTaGGCCTCCTGTAATGTCCCC +
Preference number: 5 (lower is better)
Translates to: DIAHAAPSAKPEQLLMPPLASLY*ASCNVP
Trigger: GGGGACATTACAGGAGGCCAAATAGAGGGATGCTAG...GGGTGGCATCAGGAGCTGCTCAGGCTTGGCGGAGGGAGCGGCATGGGCGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGGGCACTCCCCAGATCTTTaGGCAGGAGGGCAGAAGGTT +
Preference number: 5 (lower is better)
Translates to: LRYTKEAGEGGAPPGGCGHSPDL*AGGQKV
Trigger: AACCTTCTGCCCTCCTGCCAAAAGATCTGGGGAGTG...CCCGCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCCACTCCCCAGATCTTTaGGCAGGAGGGCAGAAGGTT +
Preference number: 5 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCHSPDL*AGGQKV
Trigger: AACCTTCTGCCCTCCTGCCAAAAGATCTGGGGAGTG...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCTGCCTTGCCTGCTCTaGCACTCAGGAGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: ARESLHREVTSWLCPRTLLPCLL*HSGASL
Trigger: CAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCCCCAGGACTCTGCCTaGCCTGCTCTTGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLPQDSA*PALALR
Trigger: CCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS TCA 90 bp CCCGGGCATCAGCTTGGCAGGGGCAGTGCCCCCGGATATCAAACTTaGCCCAGACCTGGTGCATTGCAGTGCTCAGCTCTGCCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: PGHQLGRGSAPGYQT*PRPGALQCSALPKP
Trigger: AGGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTGCCCCTGCCAAGCTGATGCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS TCA 90 bp CCCGGGCATCAGCTTGGCAGGGGCAGTGCCCCCGGATATCAAACTTaGCCCAGACCTGGTGCATTGCAGTGCTCAGCTCTGCCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: PGHQLGRGSAPGYQT*PRPGALQCSALPKL
Trigger: CAGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTGCCCCTGCCAAGCTGATGCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518461.2
CDS GCA 90 bp TCCTCGACCTCAGGGCAGCCGCGTGGACATTCAAACTGCTCCGAGTaGCGTGTGAGCCATGTCTTCTTCAGCTTGGTGTGGTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSTSGQPRGHSNCSE*RVSHVFFSLVWWLG
Trigger: CCCCAGCCACCACACCAAGCTGAAGAAGACATGGCTCACACGGCACTCGGAGCAGTTTGAATGTCCACGCGGCTGCCCTGAGGTCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp ACCGGCCTCTCCTCGACCTCAGGGCAGCCGCGTGGACATTCAAACTaGTCCGAGTGCCGTGTGAGCCATGTCTTCTTCAGCTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TGLSSTSGQPRGHSN*SECRVSHVFFSLVW
Trigger: CCACACCAAGCTGAAGAAGACATGGCTCACACGGCACTCGGAGCAGTTTGAATGTCCACGCGGCTGCCCTGAGGTCGAGGAGAGGCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp CTCCTGTCTCACGATGCCGTTCTCTGGGGCCGTCTTCTCCCAGGTTaGGGTGCCCTTCAGGAAGCTGGGCGTACTCTCCATCACTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLSHDAVLWGRLLPG*GALQEAGRTLHHSP
Trigger: AGGAGAGTGATGGAGAGTACGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTGAGACAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCTGCCAAGGGCTCCTTaGCCAACCTGGGAATGCTCG +
Preference number: 5 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRLPRAP*PTWECS
Trigger: CGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCAGGGGCACCTTGGTGTaGCTGGTGGCCCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: QLRAALLHLSLRQISMSPRGTLV*LVAPAG
Trigger: ACCAGCTGGGGCCACCAGCAACACCAAGGTGCCCCT...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAAGGGGCACCTTGGTGTaGCTGGTGGCCCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQRGTLV*LVAPAG
Trigger: ACCAGCTGGGGCCACCAGCAACACCAAGGTGCCCCT...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACAGGAGAGGGGCACCTaGGTGTTGCTGGTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGQERGT*VLLVAP
Trigger: TGGGGCCACCAGCAACACCAAGGTGCCCCTCTCCTG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGGCATTGAGCCAGTTTaGCAGGGAGAGCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPGIEPV*QGEPGM
Trigger: CATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGCC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGGGCACAACTTTGGCATaGAGCCAGTTTTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ARESLHREVTSWLCPRTLGTTLA*SQFCRE
Trigger: CTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGCC...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGAGGAAGGTTGTGGAGTaGGGGGCGTTTTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: ARESLHREVTSWLCPRTLRKVVE*GAFSVL
Trigger: CAACACAGAAAACGCCCCCAACTCCACAACCTTCCT...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACATGGCCCAAGCAGAGTTaGACCGCGGTAGAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: APGLCLACSCTQEHLWGTWPKQS*TAVEAS
Trigger: GCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCA...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp TTTGGGCGAAGCTCAGGCCAGGAGAAGCCCTCCCAGAATGTTGTGCTGCCCAGGTGGCCCAAGCAGAGTTaGACCGCGGTAGAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: FGRSSGQEKPSQNVVLPRWPKQS*TAVEAS
Trigger: GCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCA...CCTGGGCAGCACAACATTCTGGGAGGGCTTCTCCTGGCCTGAGCTTCGCCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGCCCAAGCAGAGTTaGACCGCGGTAGAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLWPKQS*TAVEAS
Trigger: GCTGGCTTCTACCGCGGTCAAACTCTGCTTGGGCCA...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CCCCAAGAGCTTCTGTCCCCCACAGGTTGCCCTGCAATGTCCTTTGGATCCCTGAGCCCTCCCAGAATGTaGTGCTGCCCAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PQELLSPTGCPAMSFGSLSPPRM*CCPGCW
Trigger: CCAGCAGCCTGGGCAGCACAACATTCTGGGAGGGCT...CAGGGATCCAAAGGACATTGCAGGGCAACCTGTGGGGGACAGAAGCTCTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CAA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGTCCACACAGAGGTTCTaGGTCCCCAGGTGTCCCCGG +
Preference number: 5 (lower is better)
Translates to: VQHACSEPSEDAVVETELSTQRF*VPRCPR
Trigger: CCGGGGACACCTGGGGACCAAGAACCTCTGTGTGGA...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCTCGGGAGTCTCTGCACAGGGAGGTCACCTCGTGGCTGTGCCCCAGGACTCTGCTAGCATCCCTCTATTaGGCCTCCTGTAATGTCCCC +
Preference number: 5 (lower is better)
Translates to: ARESLHREVTSWLCPRTLLASLY*ASCNVP
Trigger: GGGGACATTACAGGAGGCCAAATAGAGGGATGCTAG...CAGAGTCCTGGGGCACAGCCACGAGGTGACCTCCCTGTGCAGAGACTCCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCCCAAGGAAGGGCTGTTaGTCTCCTGGGTCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGPRKGC*SPGSRR
Trigger: CCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGG...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS TCA 90 bp CAGGACCTTATCCTAGGCAGACAATGGGTGAGTCAGTGGCTGCAATaGCCCGAGGGCAGGGGAGGCCTAGAGAGATGGAGCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QDLILGRQWVSQWLQ*PEGRGGLERWSCSG
Trigger: CCCTGAGCAGCTCCATCTCTCTAGGCCTCCCCTGCCCTCGGGTCATTGCAGCCACTGACTCACCCATTGTCTGCCTAGGATAAGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS CCA 90 bp GCTTGGCAGGGGCAGTGCCCCCGGATATCAAACTTGACCCAGACCTaGTGCATTGCAGTGCTCAGCTCTGCCAAAGCCTGGCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: AWQGQCPRISNLTQT*CIAVLSSAKAWLET
Trigger: TGTCTCCAGCCAGGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTGCCCCTGCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCGTCTTCTCCCAGGTaGGGGTGCCCTTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPSSPR*GCPSGS
Trigger: GCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGCTCGCTCCAGGATCTaGGTCTCCAGAAGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: APGLCLACSCTQEHLWGTARSRI*VSRRKG
Trigger: CCCTTTCCTTCTGGAGACCAAGATCCTGGAGCGAGC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGCTGCCAAGGGCTCCTTaGCCAACCTGGGAATGCTCG +
Preference number: 5 (lower is better)
Translates to: VQHACSEPSEDAVVETELLPRAP*PTWECS
Trigger: CGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAG...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGGCATTGAGCCAGTTTaGCAGGGAGAGCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRGIEPV*QGEPGM
Trigger: CATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGCC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGGAGGAGTGGGGATTGGAGGAAGTCAATTGCCCCCAGTGCGGGCCTGGTACCAGGGGCGTTTTCTGTGTaGATTCCTTCTGCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: RRSGDWRKSIAPSAGLVPGAFSV*IPSAGL
Trigger: CAGGCCAGCAGAAGGAATCAACACAGAAAACGCCCC...TGGTACCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAATCCCCACTCCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGAGGAAGGTTGTGGAGTaGGGGGCGTTTTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: RAEIHKGSGRGRSATRRLRKVVE*GAFSVL
Trigger: CAACACAGAAAACGCCCCCAACTCCACAACCTTCCT...CAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp TCCCCCAAAGCTCGGTGCAGCAGGAGGACAGAGCCCTCGTCTGACTTTGGGCGAGCCATTGCAGGAAGGTaGTGGAGTTGGGGGCGTTTT +
Preference number: 5 (lower is better)
Translates to: SPKARCSRRTEPSSDFGRAIAGR*WSWGRF
Trigger: AAAACGCCCCCAACTCCACAACCTTCCTGCAATGGC...TCGCCCAAAGTCAGACGAGGGCTCTGTCCTCCTGCTGCACCGAGCTTTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CAA 90 bp TCCCCCAAAGCTCGGTGCAGCAGGAGGACAGAGCCCTCGTCTGACTTTGGGCGACTGTGGGTGTCGCCATaGCAGGAAGGTTGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: SPKARCSRRTEPSSDFGRLWVSP*QEGCGV
Trigger: AACTCCACAACCTTCCTGCAATGGCGACACCCACAG...TCGCCCAAAGTCAGACGAGGGCTCTGTCCTCCTGCTGCACCGAGCTTTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CAA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCTCCACACAGAGGTTCTaGGTCCCCAGGTGTCCCCGG +
Preference number: 5 (lower is better)
Translates to: QLRAALLHLSLRQISMSPSTQRF*VPRCPR
Trigger: CCGGGGACACCTGGGGACCAAGAACCTCTGTGTGGA...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGGCCACCTTCACTGCTaGGAACACAGCCCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: APGLCLACSCTQEHLWGTGHLHC*EHSPVH
Trigger: ATGGACTGGGCTGTGTTCCAAGCAGTGAAGGTGGCC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGGCCACCTTCACTGCTaGGAACACAGCCCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADGHLHC*EHSPVH
Trigger: ATGGACTGGGCTGTGTTCCAAGCAGTGAAGGTGGCC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGGCTGAGATACACAAAGGAAGCGGGAGAGGGCGGAGCGCCACCAGGAGGCTGCGCTGCCCTACTCCATTaGTCTCTAAGGCAGATTTCC +
Preference number: 5 (lower is better)
Translates to: GLRYTKEAGEGGAPPGGCAALLH*SLRQIS
Trigger: GGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGC...GCAGCCTCCTGGTGGCGCTCCGCCCTCTCCCGCTTCCTTTGTGTATCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCCCCAGGACTCTGCCTaGCCTGCTCTTGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: QLRAALLHLSLRQISMSPPQDSA*PALALR
Trigger: CCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
60% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCCCAGGACTCTGCCTaGCCTGCTCTTGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPQDSA*PALALR
Trigger: CCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp TCCCTCTCCAGCTGCCTGGGCACAACTTTGGCATTGAGCCAGTTTTaGAGGGAGAGCCAGGCATGGTATGTCCTGAAGTCCCGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: SLSSCLGTTLALSQF*RESQAWYVLKSRVL
Trigger: CAGGACCCGGGACTTCAGGACATACCATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGCCCAGGCAGCTGGAGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp GGGGCAGTGCCCCCGGATATCAAACTTGACCCAGACCTGGTGCATTaGAGTGCTCAGCTCTGCCAAAGCCTGGCTGGAGACAAACTGGGT +
Preference number: 5 (lower is better)
Translates to: GAVPPDIKLDPDLVH*SAQLCQSLAGDKLG
Trigger: ACCCAGTTTGTCTCCAGCCAGGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp TGGCAGGGGCAGTGCCCCCGGATATCAAACTTGACCCAGACCTGGTaGATTGCAGTGCTCAGCTCTGCCAAAGCCTGGCTGGAGACAAAC +
Preference number: 5 (lower is better)
Translates to: WQGQCPRISNLTQTW*IAVLSSAKAWLETN
Trigger: GTTTGTCTCCAGCCAGGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTGCCCCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp GTCATCTATGGAGGAGGTACCCTAGACATGGGCCATGGGGTCCCCTaGACATCCCAGTCTCAGATAGAGGGCCCTTGTCTGCCCACCCAT +
Preference number: 5 (lower is better)
Translates to: VIYGGGTLDMGHGVP*TSQSQIEGPCLPTH
Trigger: ATGGGTGGGCAGACAAGGGCCCTCTATCTGAGACTGGGATGTGCAGGGGACCCCATGGCCCATGTCTAGGGTACCTCCTCCATAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS CCA 90 bp GGCACAACTTTGGCATTGAGCCAGTTTTGCAGGGAGAGCCAGGCATaGTATGTCCTGAAGTCCCGGGTCCTGGAGACTGGCCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: GTTLALSQFCRESQA*YVLKSRVLETGLAI
Trigger: GATGGCCAGGCCAGTCTCCAGGACCCGGGACTTCAGGACATACCATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp GGGAGTGGGAGTCATCTATGGAGGAGGTACCCTAGACATGGGCCATaGGGTCCCCTGCACATCCCAGTCTCAGATAGAGGGCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GSGSHLWRRYPRHGP*GPLHIPVSDRGPLS
Trigger: AGACAAGGGCCCTCTATCTGAGACTGGGATGTGCAGGGGACCCCATGGCCCATGTCTAGGGTACCTCCTCCATAGATGACTCCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS-3UTR CAA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGCTCGCTCCAGGATCTaGGTCTCCAGAAGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: VQHACSEPSEDAVVETELARSRI*VSRRKG
Trigger: CCCTTTCCTTCTGGAGACCAAGATCCTGGAGCGAGC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGACTGCCAAGGGCTCCTTaGCCAACCTGGGAATGCTCG +
Preference number: 5 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGLPRAP*PTWECS
Trigger: CGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAG...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCATCGCCAGTGGGTGTaGAAGAGTCCATGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLHRQWV*KSPWWQ
Trigger: TTGCCACCATGGACTCTTCAACACCCACTGGCGATG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGGGGCGTTTTCTGTGTaGATTCCTTCTGCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADGAFSV*IPSAGL
Trigger: CAGGCCAGCAGAAGGAATCAACACAGAAAACGCCCC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGGGGCGTTTTCTGTGTaGATTCCTTCTGCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGGAFSV*IPSAGL
Trigger: CAGGCCAGCAGAAGGAATCAACACAGAAAACGCCCC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp TGGGCGAAGCTCAGGCCAGGAGAAGCCCTCCCAGAATGTTGTGCTGCCCAGGCTAGGAAGGTTGTGGAGTaGGGGGCGTTTTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: WAKLRPGEALPECCAAQARKVVE*GAFSVL
Trigger: CAACACAGAAAACGCCCCCAACTCCACAACCTTCCT...AGCCTGGGCAGCACAACATTCTGGGAGGGCTTCTCCTGGCCTGAGCTTCGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS-3UTR CAA 90 bp GCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTTGGGGGACAGCCATTGCAGGAAGGTaGTGGAGTTGGGGGCGTTTT +
Preference number: 5 (lower is better)
Translates to: APGLCLACSCTQEHLWGTAIAGR*WSWGRF
Trigger: AAAACGCCCCCAACTCCACAACCTTCCTGCAATGGC...TGTCCCCCAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGCCATTGCAGGAAGGTaGTGGAGTTGGGGGCGTTTT +
Preference number: 5 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGAIAGR*WSWGRF
Trigger: AAAACGCCCCCAACTCCACAACCTTCCTGCAATGGC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGCTGTGGGTGTCGCCATaGCAGGAAGGTTGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRLWVSP*QEGCGV
Trigger: AACTCCACAACCTTCCTGCAATGGCGACACCCACAG...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GTCCCTTGGGCCCCAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATGTGGTGCTTGTGGGGTaGACCAGAAATCCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: VPWAPAPGCPTPFVSKADVVLVG*TRNPQV
Trigger: GACTTGGGGATTTCTGGTCAACCCCACAAGCACCAC...ATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTGGGGCCCAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCATTGGAGGAAGTCAATaGCCCCCAGTGCGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QLRAALLHLSLRQISMSPIGGSQ*PPVRAW
Trigger: CCAGGCCCGCACTGGGGGCAATTGACTTCCTCCAAT...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGAAGGTTGGAGGCCCCTaGTTCAGCATGCCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: VQHACSEPSEDAVVETELKVGGP*FSMPAV
Trigger: CACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAAACTGGCCTGGCCATCTaGGGGTCCTTTCTGCTCATC +
Preference number: 5 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQTGLAI*GSFLLI
Trigger: GATGAGCAGAAAGGACCCCAAGATGGCCAGGCCAGT...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGGCACAACTTTGGCATaGAGCCAGTTTTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRGTTLA*SQFCRE
Trigger: CTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGCC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CGTGGCTGTGCCCCAGGACTCTGCCTTGCCTGCTCTTGCACTCAGGAGCATCTTCCCCGGATATCAAACTaGACCCAGACCTGGTGCATT +
Preference number: 5 (lower is better)
Translates to: RGCAPGLCLACSCTQEHLPRISN*TQTWCI
Trigger: AATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGG...AAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAGAGTCCTGGGGCACAGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGGTGGTGCTTGTGGGGTaGACCAGAAATCCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: VQHACSEPSEDAVVETELVVLVG*TRNPQV
Trigger: GACTTGGGGATTTCTGGTCAACCCCACAAGCACCAC...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp TTTCCCCAAGGAAGGGCTGTTTGTCTCCTGGGTCTCGGAGGAGTGGGGATTGGAAACAGAGTGCCCTGCTaGTGCCCAGAGTGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: FPQGRAVCLLGLGGVGIGNRVPC*CPEWCL
Trigger: CAAGCACCACTCTGGGCACAAGCAGGGCACTCTGTT...TCCAATCCCCACTCCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGTGGTAGAAACGGAGCTGCTGCCTTGCCTGCTCTaGCACTCAGGAGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: VQHACSEPSEDAVVETELLPCLL*HSGASL
Trigger: CAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAG...CAGCTCCGTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp CACCCAGCCCAGAAGAGGCCATCTGTGTGTGGAGGTGTGCTTGTCTaGTCCCCTCTGCGTGTCCCAGCATCTGTGTGTGTATCTACACAT +
Preference number: 5 (lower is better)
Translates to: HPAQKRPSVCGGVLV*SPLRVPASVCVSTH
Trigger: ATGTGTAGATACACACACAGATGCTGGGACACGCAGAGGGGAGCAGACAAGCACACCTCCACACACAGATGGCCTCTTCTGGGCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGGGCTGCCTGCCCTTTaGAGGGCCCGGAGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRGLPAL*RARSRA
Trigger: TGCTCGGCTCCGGGCCCTCAAAAGGGCAGGCAGCCC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCGGGCTGCCCTACTCCATTTGTCTCTAAGGCAGATTTCCATGTCCCCCCCCGAGTCCACATCCTaGTTCCCTATCGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: QLRAALLHLSLRQISMSPPESTS*FPIDVS
Trigger: GGACACATCGATAGGGAACAAGGATGTGGACTCGGG...GGGGGACATGGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGCCCGGAGCTG
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACACTCCCCAGATCTTTaGGCAGGAGGGCAGAAGGTT +
Preference number: 5 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQHSPDL*AGGQKV
Trigger: AACCTTCTGCCCTCCTGCCAAAAGATCTGGGGAGTG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGGTTGGAGGCCCCTTGTTCAGCATGCCTGCAGTGAGCCCAGTGAGGATGCGGGCTGCCCTACTCCATTaGTCTCTAAGGCAGATTTCC +
Preference number: 5 (lower is better)
Translates to: KVGGPLFSMPAVSPVRMRAALLH*SLRQIS
Trigger: GGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGC...CCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAGCTCCTGATGCCACCCTCTCCTCACACTCCCCAGATCTTTTGGCAGGAGGGCGCTGCCCTACTCCATTaGTCTCTAAGGCAGATTTCC +
Preference number: 5 (lower is better)
Translates to: QLLMPPSPHTPQIFWQEGAALLH*SLRQIS
Trigger: GGAAATCTGCCTTAGAGACAAATGGAGTAGGGCAGC...GCCCTCCTGCCAAAAGATCTGGGGAGTGTGAGGAGAGGGTGGCATCAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp CAAACAACCCAGGTTCCGCAGCTGCCAAGGGCTCCTTTGCCAACCTaGGAATGCTCGGATCCTTGTAGTAAAAGCCCTTGCTGCCTAAGC +
Preference number: 5 (lower is better)
Translates to: QTTQVPQLPRAPLPT*ECSDPCSKSPCCLS
Trigger: GCTTAGGCAGCAAGGGCTTTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTGGGTTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp TGTTTGGGGCTGGGGCAGCTCAGGTTGGCAGAACACACATTTGGCTaGAAGGAGCTTAGAAGGAAGGGATTCAAGGCCCTACAGTTGGGC +
Preference number: 5 (lower is better)
Translates to: CLGLGQLRLAEHTFG*KELRRKGFKALQLG
Trigger: GCCCAACTGTAGGGCCTTGAATCCCTTCCTTCTAAGCTCCTTCCAGCCAAATGTGTGTTCTGCCAACCTGAGCTGCCCCAGCCCCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS CCA 90 bp AGGGAGGGCATGGCTGAGTTTGTTTGGGGCTGGGGCAGCTCAGGTTaGCAGAACACACATTTGGCTGGAAGGAGCTTAGAAGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: REGMAEFVWGWGSSG*QNTHLAGRSLEGRD
Trigger: ATCCCTTCCTTCTAAGCTCCTTCCAGCCAAATGTGTGTTCTGCCAACCTGAGCTGCCCCAGCCCCAAACAAACTCAGCCATGCCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS-3UTR CAA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGGGCTGCCTGCCCTTTaGAGGGCCCGGAGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGGLPAL*RARSRA
Trigger: TGCTCGGCTCCGGGCCCTCAAAAGGGCAGGCAGCCC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AGTGCCCTGCTTGTGCCCAGAGTGGTGCTTGTGGGGTTGACCAGAAATCCCCAACCCCGGATATCAAACTaGACCCAGACCTGGTGCATT +
Preference number: 5 (lower is better)
Translates to: SALLVPRVVLVGLTRNPQPRISN*TQTWCI
Trigger: AATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGG...TTGGGGATTTCTGGTCAACCCCACAAGCACCACTCTGGGCACAAGCAGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGGGGGCGGACTGGAGCTaGCTGGGTGGAGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGGADWS*LGGVGL
Trigger: GAGCCCTACTCCACCCAGCAAGCTCCAGTCCGCCCC...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS TCA 90 bp AGGAGCTTAGAAGGAAGGGATTCAAGGCCCTACAGTTGGGCAGACTaGATCCCTGCTTTTCTGGGGCTGGAGGCCTTTAACAGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: RSLEGRDSRPYSWAD*IPAFLGLEAFNSLC
Trigger: ACAGAGGCTGTTAAAGGCCTCCAGCCCCAGAAAAGCAGGGATTCAGTCTGCCCAACTGTAGGGCCTTGAATCCCTTCCTTCTAAGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACAGCGCAGTCCCTCTTaGCTGCCCAGCCAGTTGACC +
Preference number: 5 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRQRSPS*LPSQLT
Trigger: GGTCAACTGGCTGGGCAGCAAAGAGGGACTGCGCTG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS TCA 90 bp AGGATTTCTCAGACGTCCCCACAAGGAAGTCTAAGAACTAAAGAGTaGATGCCTGGCACAGCCAAAGGGCATCTGGGGTCTGTTTGGGCC +
Preference number: 5 (lower is better)
Translates to: RISQTSPQGSLRTKE*MPGTAKGHLGSVWA
Trigger: GGCCCAAACAGACCCCAGATGCCCTTTGGCTGTGCCAGGCATTCACTCTTTAGTTCTTAGACTTCCTTGTGGGGACGTCTGAGAAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519619.1
CDS-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGATTGCTGCCCAGCCAGTaGACCTTCCTCTCCCCATTC +
Preference number: 5 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRLLPSQ*TFLSPF
Trigger: GAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCAA...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACTGGGGCCAGAGGCCTaGTTCACTTCCTCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKELGPEA*FTSSLG
Trigger: ACCCAGCGAGGAAGTGAACAAGGCCTCTGGCCCCAG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGGCATTGAGCCAGTTTaGCAGGGAGAGCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRGIEPV*QGEPGM
Trigger: CATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGCC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAAAGGTTGGAGGCCCCTaGTTCAGCATGCCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRKVGGP*FSMPAV
Trigger: CACTGCAGGCATGCTGAACAAGGGGCCTCCAACCTT...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGACCCGAGTCCACATCCTaGTTCCCTATCGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRPESTS*FPIDVS
Trigger: GGACACATCGATAGGGAACAAGGATGTGGACTCGGG...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGCCCTCCCAGAATGTaGTGCTGCCCAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCSPPRM*CCPGCW
Trigger: CCAGCAGCCTGGGCAGCACAACATTCTGGGAGGGCT...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGCCCTCGTCTGACTTaGGGCGAAGCTCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCSPRLT*GEAQAR
Trigger: CCTGGCCTGAGCTTCGCCCAAAGTCAGACGAGGGCT...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp AAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCGGGAGAGTGGTGCTTGTGGGGTaGACCAGAAATCCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: KSGSVFLCRAEIHKGSGRVVLVG*TRNPQV
Trigger: GACTTGGGGATTTCTGGTCAACCCCACAAGCACCAC...TCTCCCGCTTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACCAAGGAAGGGCTGTTaGTCTCCTGGGTCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEPRKGC*SPGSRR
Trigger: CCTCCGAGACCCAGGAGACAAACAGCCCTTCCTTGG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 90 bp CTTCATCTGAAGTCTTTGGAATGGCCAGAATTGTGTGCTAAGTGGTaGATGAGGAGAGAGCTGTGTGTCCCTGGGGAGACAACTCAAAGT +
Preference number: 5 (lower is better)
Translates to: LHLKSLEWPELCAKW*MRRELCVPGETTQS
Trigger: ACTTTGAGTTGTCTCCCCAGGGACACACAGCTCTCTCCTCATCCACCACTTAGCACACAATTCTGGCCATTCCAAAGACTTCAGATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS CCA 90 bp CTTCTTCATCTGAAGTCTTTGGAATGGCCAGAATTGTGTGCTAAGTaGTGGATGAGGAGAGAGCTGTGTGTCCCTGGGGAGACAACTCAA +
Preference number: 5 (lower is better)
Translates to: LLHLKSLEWPELCAK*WMRRELCVPGETTQ
Trigger: TTGAGTTGTCTCCCCAGGGACACACAGCTCTCTCCTCATCCACCACTTAGCACACAATTCTGGCCATTCCAAAGACTTCAGATGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAGCCACAGGGTCACTCTaGAGATGGCCACCACTATGC +
Preference number: 5 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEATGSL*RWPPLC
Trigger: GCATAGTGGTGGCCATCTCAAGAGTGACCCTGTGGC...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGCCTTGCCTGCTCTaGCACTCAGGAGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGLPCLL*HSGASL
Trigger: CAAAGATGCTCCTGAGTGCAAGAGCAGGCAAGGCAG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 90 bp CCTCTCTCAATGGTACCCCTTTCTGCAAATCCGAGGGAGACGTCCTaGATAATCCCAGTTCATAAACTGTCTACCAGGACTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: PLSMVPLSANPRETS*IIPVHKLSTRTSSS
Trigger: AGATGAAGAAGTCCTGGTAGACAGTTTATGAACTGGGATTATGCAGGACGTCTCCCTCGGATTTGCAGAAAGGGGTACCATTGAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAACCCGAGTCCACATCCTaGTTCCCTATCGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKEPESTS*FPIDVS
Trigger: GGACACATCGATAGGGAACAAGGATGTGGACTCGGG...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CAAACCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTACTGGCCTGGCCATCTaGGGGTCCTTTCTGCTCATC +
Preference number: 5 (lower is better)
Translates to: QTTAGTIRYDKSGSVFLCTGLAI*GSFLLI
Trigger: GATGAGCAGAAAGGACCCCAAGATGGCCAGGCCAGT...ACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCCCCGGATATCAAACTaGACCCAGACCTGGTGCATT +
Preference number: 5 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGPRISN*TQTWCI
Trigger: AATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp CCACAGCAGGAACAATTAGGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTAGCATCCCTCTATTaGGCCTCCTGTAATGTCCCC +
Preference number: 5 (lower is better)
Translates to: PQQEQLGMTRVGVFFFVGLASLY*ASCNVP
Trigger: GGGGACATTACAGGAGGCCAAATAGAGGGATGCTAG...CCCTACAAAGAAAAACACTCCCACTCTTGTCATACCTAATTGTTCCTGCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS-3UTR CAA 90 bp GGTATGACAAGAGTGGGAGTGTTTTTCTTTGTAGGGCTGAGATACACAAAGGAAAGGAAGGTTGTGGAGTaGGGGGCGTTTTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: GMTRVGVFFFVGLRYTKERKVVE*GAFSVL
Trigger: CAACACAGAAAACGCCCCCAACTCCACAACCTTCCT...TTCCTTTGTGTATCTCAGCCCTACAAAGAAAAACACTCCCACTCTTGTCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 90 bp CACGGCGCGGATCGGCCGCACCAGCTTCTGGGCCGAGGCCGTAGGTaGCGCCATGGGACGCCGAGACTCCGTGCTGCGCCGCGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: HGADRPHQLLGRGRR*RHGTPRLRAAPRGG
Trigger: CCCTCCCCGCGGCGCAGCACGGAGTCTCGGCGTCCCATGGCGCAACCTACGGCCTCGGCCCAGAAGCTGGTGCGGCCGATCCGCGCCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp ATCGGCCGCACCAGCTTCTGGGCCGAGGCCGTAGGTTaGGCCATGGGACGCCGAGACTCCGTGCTGCGCCGC +
Preference number: 6 (lower is better)
Translates to: IGRTSFWAEAVG*AMGRRDSVLRR
Trigger: GCGGCGCAGCACGGAGTCTCGGCGTCCCATGGCGCAACCTACGGCCTCGGCCCAGAAGCTGGTGCGGCCGAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp ATGCGGCACACGGCGCGGATCGGCCGCACCAGCTTCTaGGCCGAGGCCGTAGGTTGCGCCATGGGACGCCGA +
Preference number: 6 (lower is better)
Translates to: MRHTARIGRTSF*AEAVGCAMGRR
Trigger: TCGGCGTCCCATGGCGCAACCTACGGCCTCGGCCCAGAAGCTGGTGCGGCCGATCCGCGCCGTGTGCCGCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 72 bp GATCGGCCGCACCAGCTTCTGGGCCGAGGCCGTAGGTaGCGCCATGGGACGCCGAGACTCCGTGCTGCGCCG +
Preference number: 6 (lower is better)
Translates to: DRPHQLLGRGRR*RHGTPRLRAAP
Trigger: CGGCGCAGCACGGAGTCTCGGCGTCCCATGGCGCAACCTACGGCCTCGGCCCAGAAGCTGGTGCGGCCGATC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 90 bp CGCAGCAGGCGGCACAGTCGGTCCCCCAAACCACTGAGCAGGTGCTaGGCGAGGCCTGTGCTGAGCCGGCTGTCAGGGCCGGACCCTGGG +
Preference number: 6 (lower is better)
Translates to: RSRRHSRSPKPLSRC*ARPVLSRLSGPDPG
Trigger: CCCAGGGTCCGGCCCTGACAGCCGGCTCAGCACAGGCCTCGCCAAGCACCTGCTCAGTGGTTTGGGGGACCGACTGTGCCGCCTGCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp CCCCGGCCGGGCACACCATCTGGAGAAAGCGGCGGATaGGCTGGGCGTCCTGTGCCCGGAACACGTGCCACA +
Preference number: 6 (lower is better)
Translates to: PRPGTPSGESGG*AGRPVPGTRAT
Trigger: TGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCCAGATGGTGTGCCCGGCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp GCGTGGGGCAGGGAGCGAGCACATGGGACCGCACACTaGGGTGGGACTGGACGAGCTTCTAGGGCTGGGCGG +
Preference number: 6 (lower is better)
Translates to: AWGRERAHGTAH*GGTGRASRAGR
Trigger: CCGCCCAGCCCTAGAAGCTCGTCCAGTCCCACCCCAGTGTGCGGTCCCATGTGCTCGCTCCCTGCCCCACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522039.1
CDS CAA 72 bp CCCATTGCTCCCTGGACCTCGGGGCTGCCTGCCCTTTaGAGGGCCCGGAGCCGAGCAACCGGCCTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: PIAPWTSGLPAL*RARSRATGLSS
Trigger: CGAGGAGAGGCCGGTTGCTCGGCTCCGGGCCCTCAAAAGGGCAGGCAGCCCCGAGGTCCAGGGAGCAATGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 90 bp GCTGGACTGCCCATTGCTCCCTGGACCTCGGGGCTGCCTGCCCTTTaGAGGGCCCGGAGCCGAGCAACCGGCCTCTCCTCGACCTCAGGG +
Preference number: 6 (lower is better)
Translates to: AGLPIAPWTSGLPAL*RARSRATGLSSTSG
Trigger: CCCTGAGGTCGAGGAGAGGCCGGTTGCTCGGCTCCGGGCCCTCAAAAGGGCAGGCAGCCCCGAGGTCCAGGGAGCAATGGGCAGTCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp GCAGGTTGGAGGGGTCGGACTCCGGGATCTGCAGGATaGGGCACACGGCGCGGATCGGCCGCACCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: AGWRGRTPGSAG*GTRRGSAAPAS
Trigger: AGAAGCTGGTGCGGCCGATCCGCGCCGTGTGCCGCATCCTGCAGATCCCGGAGTCCGACCCCTCCAACCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp AAGGGAGCAGGCTCTCCCAGGCACAGCGGCCCATGGTaGAGTCCATCTCGAGGCGGGCTGCCGGGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: KGAGSPRHSGPW*SPSRGGLPGSC
Trigger: ACAGGAGCCCGGCAGCCCGCCTCGAGATGGACTGCACCATGGGCCGCTGTGCCTGGGAGAGCCTGCTCCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS GCA 72 bp GGGGCCACAGCGAGGTGGGCACGCTGGCCCGCAGAATaGCAGCGGATGGGTAAGCATGGCCTCCTTCCAGCG +
Preference number: 6 (lower is better)
Translates to: GATARWARWPAE*QRMGKHGLLPA
Trigger: CGCTGGAAGGAGGCCATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCGCTGTGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS GCA 72 bp TGGACTGCCCATTGCTCCCTGGACCTCGGGGCTGCCTaGCCTTTTGAGGGCCCGGAGCCGAGCAACCGGCCT +
Preference number: 6 (lower is better)
Translates to: WTAHCSLDLGAA*PFEGPEPSNRP
Trigger: AGGCCGGTTGCTCGGCTCCGGGCCCTCAAAAGGGCAGGCAGCCCCGAGGTCCAGGGAGCAATGGGCAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp CAAAAGGGAGCAGGCTCTCCCAGGCACAGCGGCCCATaGTGCAGTCCATCTCGAGGCGGGCTGCCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: QKGAGSPRHSGP*CSPSRGGLPGS
Trigger: GGAGCCCGGCAGCCCGCCTCGAGATGGACTGCACCATGGGCCGCTGTGCCTGGGAGAGCCTGCTCCCTTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 72 bp CTGTGCCCCTCAGCCCTGCCCCGTGAGTCACTGGGTTaGGCCGTAGTGACTGCCCACGGCCAGCCACACCCA +
Preference number: 6 (lower is better)
Translates to: LCPSALPRESLG*AVVTAHGQPHP
Trigger: TGGGTGTGGCTGGCCGTGGGCAGTCACTACGGCCCAACCCAGTGACTCACGGGGCAGGGCTGAGGGGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS CAA 72 bp CGGCACAGTCGGTCCCCCAAACCACTGAGCAGGTGCTaGGCGAGGCCTGTGCTGAGCCGGCTGTCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: RHSRSPKPLSRC*ARPVLSRLSGP
Trigger: CGGCCCTGACAGCCGGCTCAGCACAGGCCTCGCCAAGCACCTGCTCAGTGGTTTGGGGGACCGACTGTGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp ACAGCGGCCCATGGTGCAGTCCATCTCGAGGCGGGCTaGCGGGCTCCTGTCTCACGATGCCGTTCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: TAAHGAVHLEAG*RAPVSRCRSLG
Trigger: CCCCAGAGAACGGCATCGTGAGACAGGAGCCCGGCAGCCCGCCTCGAGATGGACTGCACCATGGGCCGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS GCA 72 bp TGCTGCCGGCCAGCTCCCATCTCTCCATCCCTCTGGTaGAGTGAAGGGCGTTCGGCCTCCCCGGCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: CCRPAPISPSLW*SEGRSASPALC
Trigger: GCAGAGAGCCGGGGAGGCCGAACGCCCTTCACTGCACCAGAGGGATGGAGAGATGGGAGCTGGCCGGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS GCA 72 bp AGGCGGCACAGTCGGTCCCCCAAACCACTGAGCAGGTaGTTGGCGAGGCCTGTGCTGAGCCGGCTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: RRHSRSPKPLSR*LARPVLSRLSG
Trigger: CCCTGACAGCCGGCTCAGCACAGGCCTCGCCAAGCACCTGCTCAGTGGTTTGGGGGACCGACTGTGCCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp CCGGCTGCCTCCTCACCATCTGGAGAAAGCGGCGGATaGGCTGGGCGTCCTGTGCCCGGAACACGTGCCACA +
Preference number: 6 (lower is better)
Translates to: PAASSPSGESGG*AGRPVPGTRAT
Trigger: TGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCCAGATGGTGAGGAGGCAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522039.1
CDS CCA 72 bp CGGGCTGCCGGGCTCCTGTCTCACGATGCCGTTCTCTaGGGCCGTCTTCTCCCAGGTTGGGGTGCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: RAAGLLSHDAVL*GRLLPGWGALQ
Trigger: CTGAAGGGCACCCCAACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTGAGACAGGAGCCCGGCAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 72 bp CTCAGGCATCAGGGGGCCACAGCGAGGTGGGCACGCTaGCCCGCAGAATGCCAGCGGATGGGTAAGCATGGC +
Preference number: 6 (lower is better)
Translates to: LRHQGATARWAR*PAECQRMGKHG
Trigger: GCCATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCGCTGTGGCCCCCTGATGCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 72 bp GAGGCCTGTGCTGAGCCGGCTGTCAGGGCCGGACCCTaGGCCTTCCTCAGAGCTGGAGTTGGTGGCTGTGTC +
Preference number: 6 (lower is better)
Translates to: EACAEPAVRAGP*AFLRAGVGGCV
Trigger: GACACAGCCACCAACTCCAGCTCTGAGGAAGGCCCAGGGTCCGGCCCTGACAGCCGGCTCAGCACAGGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp GCCGGGCACACCATCTGGAGAAAGCGGCGGATGCGCTaGGCGTCCTGTGCCCGGAACACGTGCCACACAGTG +
Preference number: 6 (lower is better)
Translates to: AGHTIWRKRRMR*ASCARNTCHTV
Trigger: CACTGTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCCAGATGGTGTGCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381418.9
ENST00000680789.1
CDS TCA 72 bp GGAGGTAGAGCGCGGCGGAGAGCGCAGCAGGACCTCTaGTCGCCATCGCCAGAAGCGCAACTGAGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: GGRARRRAQQDL*SPSPEAQLRVG
Trigger: CCCCACTCTCAGTTGCGCTTCTGGCGATGGCGATCAGAGGTCCTGCTGCGCTCTCCGCCGCGCTCTACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312841.9
ENST00000680789.1
CDS GCA 72 bp GCATCAGGGAACAGGCAGCGTGCCCGGCCTCCTGCGTaGACTCCTCCGCGGACTGCTCCTGAAAGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: ASGNRQRARPPA*TPPRTAPESLL
Trigger: AAGCAGGCTTTCAGGAGCAGTCCGCGGAGGAGTGCACGCAGGAGGCCGGGCACGCTGCCTGTTCCCTGATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp GAGACAAACTGGGTCAGCATCAGGGAACAGGCAGCGTaGCCGGCCTCCTGCGTGCACTCCTCCGCGGACTGC +
Preference number: 6 (lower is better)
Translates to: ETNWVSIREQAA*PASCVHSSADC
Trigger: GCAGTCCGCGGAGGAGTGCACGCAGGAGGCCGGGCACGCTGCCTGTTCCCTGATGCTGACCCAGTTTGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp TCACCAGGCCCTGCACCATCTGGAGAAAGCGGCGGATaGGCTGGGCGTCCTGTGCCCGGAACACGTGCCACA +
Preference number: 6 (lower is better)
Translates to: SPGPAPSGESGG*AGRPVPGTRAT
Trigger: TGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCCAGATGGTGCAGGGCCTGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312841.9
CDS CCA 72 bp CGAGGTGGGCACGCTGGCCCGCAGAATGCCAGCGGATaGGTAAGCATGGCCTCCTTCCAGCGCAGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: RGGHAGPQNASG*VSMASFQRSPS
Trigger: AGAGGGACTGCGCTGGAAGGAGGCCATGCTTACCCATCCGCTGGCATTCTGCGGGCCAGCGTGCCCACCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 72 bp TTCTGCTGCCGGCCAGCTCCCATCTCTCCATCCCTCTaGTGCAGTGAAGGGCGTTCGGCCTCCCCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: FCCRPAPISPSL*CSEGRSASPAL
Trigger: GAGAGCCGGGGAGGCCGAACGCCCTTCACTGCACCAGAGGGATGGAGAGATGGGAGCTGGCCGGCAGCAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS CCA 72 bp AGGCCCTGCACCATCTGGAGAAAGCGGCGGATGCGCTaGGCGTCCTGTGCCCGGAACACGTGCCACACAGTG +
Preference number: 6 (lower is better)
Translates to: RPCTIWRKRRMR*ASCARNTCHTV
Trigger: CACTGTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCCAGATGGTGCAGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312841.9
CDS TCA 72 bp CCTTCCAGCGCAGTCCCTCTTTGCTGCCCAGCCAGTTaGCCTTCCTCTCCCCATTCTGGGGGCCCTCGCCCT +
Preference number: 6 (lower is better)
Translates to: PSSAVPLCCPAS*PSSPHSGGPRP
Trigger: AGGGCGAGGGCCCCCAGAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCAAAGAGGGACTGCGCTGGAAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS TCA 72 bp CCATCGCCTGGCCCAGCCCAGACGTTGCCAAGAGTATaGACAAGGCCTGGGGGACAAGCGGGCCAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: PSPGPAQTLPRV*TRPGGQAGQEV
Trigger: GACCTCCTGGCCCGCTTGTCCCCCAGGCCTTGTTCATACTCTTGGCAACGTCTGGGCTGGGCCAGGCGATGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS TCA 72 bp CCCTCTCTGCCCCTGCACTCACCTTGCTGCCTAAGCTaGAGGCAGAGGGCACTTTGGGCTGGCCCCCGGAGT +
Preference number: 6 (lower is better)
Translates to: PSLPLHSPCCLS*RQRALWAGPRS
Trigger: ACTCCGGGGGCCAGCCCAAAGTGCCCTCTGCCTTCAGCTTAGGCAGCAAGGTGAGTGCAGGGGCAGAGAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS TCA 72 bp GGGAAGGACCACTGCGAGGCTCTGAGTGCCAGCAGGTaGACAGGCTTTCCGGCCAGGCTGAGGCCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: GKDHCEALSASR*TGFPARLRPLQ
Trigger: CTGCAGAGGCCTCAGCCTGGCCGGAAAGCCTGTTCACCTGCTGGCACTCAGAGCCTCGCAGTGGTCCTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS GCA 72 bp GGTGACAGGCGGCTCAGGAGAGGGGCACCTTGGTGTTaGTGGTGGCCCCAGCTGGTACCCAAGGTTCCCATC +
Preference number: 6 (lower is better)
Translates to: GDRRLRRGAPWC*WWPQLVPKVPI
Trigger: GATGGGAACCTTGGGTACCAGCTGGGGCCACCAGCAACACCAAGGTGCCCCTCTCCTGAGCCGCCTGTCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp AGAGTCCATGGTGGCAACGGCTGCAGCAGCGTGGAATaGCTGGGCTGTCCTCTGTCACGGCTGGCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: RVHGGNGCSSVE*LGCPLSRLALG
Trigger: GCCAAGGGCCAGCCGTGACAGAGGACAGCCCAGGCATTCCACGCTGCTGCAGCCGTTGCCACCATGGACTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp CATCTGGAGAAAGCGGCGGATGCGCTGGGCGTCCTGTaGCCGGAACACGTGCCACACAGTGCTGACCTGGCT +
Preference number: 6 (lower is better)
Translates to: HLEKAADALGVL*PEHVPHSADLA
Trigger: AGCCAGGTCAGCACTGTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCCAGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522039.1
ENST00000680789.1
CDS GCA 72 bp TGCCTTCTCTGCACCTGTCTGTGCGAGTTGGGTCTGTaGAGCTCACCTGAGGGCGTGGGGCAGGGAGCGAGC +
Preference number: 6 (lower is better)
Translates to: CLLCTCLCELGL*SSPEGVGQGAS
Trigger: GCTCGCTCCCTGCCCCACGCCCTCAGGTGAGCTGCACAGACCCAACTCGCACAGACAGGTGCAGAGAAGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522039.1
CDS CCA 72 bp GGGGCAGGCCAGACACTAGGTAGGGTGGCAAGCAGGTaGGCACCCAGAAGGGAGCTCGCTCCAGGATCTTGG +
Preference number: 6 (lower is better)
Translates to: GAGQTLGRVASR*APRRELAPGSW
Trigger: CCAAGATCCTGGAGCGAGCTCCCTTCTGGGTGCCCACCTGCTTGCCACCCTACCTAGTGTCTGGCCTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 72 bp TCCATGGTGGCAACGGCTGCAGCAGCGTGGAATGCCTaGGCTGTCCTCTGTCACGGCTGGCCCTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SMVATAAAAWNA*AVLCHGWPLAF
Trigger: GAAGGCCAAGGGCCAGCCGTGACAGAGGACAGCCCAGGCATTCCACGCTGCTGCAGCCGTTGCCACCATGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp ACAAGGCAGGGGCCCTCGGCCAGCACGGTCCTCTGCTaGGGTCTCAGCGGAATCGGGGGTCTCCTCTTTGAT +
Preference number: 6 (lower is better)
Translates to: TRQGPSASTVLC*GLSGIGGLLFD
Trigger: ATCAAAGAGGAGACCCCCGATTCCGCTGAGACCCCAGCAGAGGACCGTGCTGGCCGAGGGCCCCTGCCTTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000517699.2
ENST00000518461.2
ENST00000680789.1
CDS CCA 72 bp TGCCTCCTCACCATCTGGAGAAAGCGGCGGATGCGCTaGGCGTCCTGTGCCCGGAACACGTGCCACACAGTG +
Preference number: 6 (lower is better)
Translates to: CLLTIWRKRRMR*ASCARNTCHTV
Trigger: CACTGTGTGGCACGTGTTCCGGGCACAGGACGCCCAGCGCATCCGCCGCTTTCTCCAGATGGTGAGGAGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522039.1
CDS CAA 72 bp ATGCTGACCAGGTCGGCCACCTCCACACAGAGGTTCTaGGTCCCCAGGTGTCCCCGGTGCGGGCTCACACCA +
Preference number: 6 (lower is better)
Translates to: MLTRSATSTQRF*VPRCPRCGLTP
Trigger: TGGTGTGAGCCCGCACCGGGGACACCTGGGGACCAAGAACCTCTGTGTGGAGGTGGCCGACCTGGTCAGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522039.1
ENST00000680789.1
CDS CAA 90 bp GCCAGCGGATGGGTAAGCATGGCCTCCTTCCAGCGCAGTCCCTCTTaGCTGCCCAGCCAGTTGACCTTCCTCTCCCCATTCTGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: ASGWVSMASFQRSPS*LPSQLTFLSPFWGP
Trigger: GGGCCCCCAGAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCAAAGAGGGACTGCGCTGGAAGGAGGCCATGCTTACCCATCCGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS GCA 72 bp CCCCACGGCAGAACTCCGGGTCCCCTCTGCCTTCTCTaGACCTGTCTGTGCGAGTTGGGTCTGTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: PHGRTPGPLCLL*TCLCELGLCSS
Trigger: TGAGCTGCACAGACCCAACTCGCACAGACAGGTGCAGAGAAGGCAGAGGGGACCCGGAGTTCTGCCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522039.1
CDS GCA 72 bp GGGACTCGCAGAGGACAGAGGTGCCCAGGGAACATGTaGAAAGGGGACGCCAGCATCGTGCTCCAACCCACC +
Preference number: 6 (lower is better)
Translates to: GTRRGQRCPGNM*KGDASIVLQPT
Trigger: GGTGGGTTGGAGCACGATGCTGGCGTCCCCTTTGCACATGTTCCCTGGGCACCTCTGTCCTCTGCGAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS CCA 72 bp TTGCTGCCCAGCCAGTTGACCTTCCTCTCCCCATTCTaGGGGCCCTCGCCCTCCACAAGTGGGAGCATGTCC +
Preference number: 6 (lower is better)
Translates to: LLPSQLTFLSPF*GPSPSTSGSMS
Trigger: GGACATGCTCCCACTTGTGGAGGGCGAGGGCCCCCAGAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 72 bp TGCCAGGGCCGGAAGGCCACAGGGTCACTCTTGAGATaGCCACCACTATGCTCAGGCATCAGGGGGCCACAG +
Preference number: 6 (lower is better)
Translates to: CQGRKATGSLLR*PPLCSGIRGPQ
Trigger: CTGTGGCCCCCTGATGCCTGAGCATAGTGGTGGCCATCTCAAGAGTGACCCTGTGGCCTTCCGGCCCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 72 bp AGCAACCGGCCTCTCCTCGACCTCAGGGCAGCCGCGTaGACATTCAAACTGCTCCGAGTGCCGTGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: SNRPLLDLRAAA*TFKLLRVPCEP
Trigger: TGGCTCACACGGCACTCGGAGCAGTTTGAATGTCCACGCGGCTGCCCTGAGGTCGAGGAGAGGCCGGTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp CGGGGACATCGCCAGTGGGTGTTGAAGAGTCCATGGTaGCAACGGCTGCAGCAGCGTGGAATGCCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RGHRQWVLKSPW*QRLQQRGMPGL
Trigger: CAGCCCAGGCATTCCACGCTGCTGCAGCCGTTGCCACCATGGACTCTTCAACACCCACTGGCGATGTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp GTGCTCAGCTCTGCCAAAGCCTGGCTGGAGACAAACTaGGTCAGCATCAGGGAACAGGCAGCGTGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: VLSSAKAWLETN*VSIREQAACPA
Trigger: GGCCGGGCACGCTGCCTGTTCCCTGATGCTGACCCAGTTTGTCTCCAGCCAGGCTTTGGCAGAGCTGAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp GAGCTGGGGCTCCAGTGGACGCAGGGCAAGGCCCGGTaGGAGGTAGGAAGCCAGGTTGAGTTTTCCATGGAG +
Preference number: 6 (lower is better)
Translates to: ELGLQWTQGKAR*EVGSQVEFSME
Trigger: CTCCATGGAAAACTCAACCTGGCTTCCTACCTCCCACCGGGCCTTGCCCTGCGTCCACTGGAGCCCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522039.1
ENST00000680789.1
CDS CAA 90 bp GCTCCTGTCTCACGATGCCGTTCTCTGGGGCCGTCTTCTCCCAGGTaGGGGTGCCCTTCAGGAAGCTGGGCGTACTCTCCATCACTCTCC +
Preference number: 6 (lower is better)
Translates to: APVSRCRSLGPSSPR*GCPSGSWAYSPSLS
Trigger: GGAGAGTGATGGAGAGTACGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTGAGACAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS TCA 72 bp AGCAGGACCTCTGATCGCCATCGCCAGAAGCGCAACTaGGAGTGGGGAAGCTGCTCCGCCGGTTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SRTSDRHRQKRN*EWGSCSAGFLL
Trigger: GAGGAGGAAACCGGCGGAGCAGCTTCCCCACTCTCAGTTGCGCTTCTGGCGATGGCGATCAGAGGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312841.9
ENST00000680789.1
CDS TCA 72 bp AGGCAGGCAGTGGTGTGTCGGCATGCACCAGGATGCTaGCCAGGTCGGCCACCTCCACACAGAGGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: RQAVVCRHAPGC*PGRPPPHRGSW
Trigger: CCAAGAACCTCTGTGTGGAGGTGGCCGACCTGGTCAGCATCCTGGTGCATGCCGACACACCACTGCCTGCCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522039.1
ENST00000680789.1
CDS TCA 72 bp CCGGATGCAGAAAAGGGAAGGACCACTGCGAGGCTCTaGGTGCCAGCAGGTGAACAGGCTTTCCGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: PDAEKGRTTARL*VPAGEQAFRPG
Trigger: GCCTGGCCGGAAAGCCTGTTCACCTGCTGGCACTCAGAGCCTCGCAGTGGTCCTTCCCTTTTCTGCATCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS GCA 72 bp TGCCGTTCTCTGGGGCCGTCTTCTCCCAGGTTGGGGTaGCCTTCAGGAAGCTGGGCGTACTCTCCATCACTC +
Preference number: 6 (lower is better)
Translates to: CRSLGPSSPRLG*PSGSWAYSPSL
Trigger: GAGTGATGGAGAGTACGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGGCCCCAGAGAACGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS GCA 72 bp CATGTGTGTACCTGTGGGCAGGAGGGGTGCACACCATaGTGGCCTCTGCACGTCTCCGTGTGTGTGTGTGCC +
Preference number: 6 (lower is better)
Translates to: HVCTCGQEGCTP*WPLHVSVCVCA
Trigger: GGCACACACACACACGGAGACGTGCAGAGGCCAGCATGGTGTGCACCCCTCCTGCCCACAGGTACACACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS CCA 72 bp CCGTCTTCTCCCAGGTTGGGGTGCCCTTCAGGAAGCTaGGCGTACTCTCCATCACTCTCCTGCCCTCATGGG +
Preference number: 6 (lower is better)
Translates to: PSSPRLGCPSGS*AYSPSLSCPHG
Trigger: CCCATGAGGGCAGGAGAGTGATGGAGAGTACGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CCA 72 bp CACGATGCCGTTCTCTGGGGCCGTCTTCTCCCAGGTTaGGGTGCCCTTCAGGAAGCTGGGCGTACTCTCCAT +
Preference number: 6 (lower is better)
Translates to: HDAVLWGRLLPG*GALQEAGRTLH
Trigger: ATGGAGAGTACGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CAA 72 bp TCACGATGCCGTTCTCTGGGGCCGTCTTCTCCCAGGTaGGGGTGCCCTTCAGGAAGCTGGGCGTACTCTCCA +
Preference number: 6 (lower is better)
Translates to: SRCRSLGPSSPR*GCPSGSWAYSP
Trigger: TGGAGAGTACGCCCAGCTTCCTGAAGGGCACCCCAACCTGGGAGAAGACGGCCCCAGAGAACGGCATCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CAA 90 bp ACCCGGGCATCAGCTTGGCAGGGGCAGTGCCCCCGGATATCAAACTaGACCCAGACCTGGTGCATTGCAGTGCTCAGCTCTGCCAAAGCC +
Preference number: 6 (lower is better)
Translates to: TRASAWQGQCPRISN*TQTWCIAVLSSAKA
Trigger: GGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTGCCCCTGCCAAGCTGATGCCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 90 bp GGGCCATGGGGTCCCCTGCACATCCCAGTCTCAGATAGAGGGCCCTaGTCTGCCCACCCATCTCCTCCCAGGACAAGCCACACATTCCAA +
Preference number: 6 (lower is better)
Translates to: GPWGPLHIPVSDRGP*SAHPSPPRTSHTFQ
Trigger: TTGGAATGTGTGGCTTGTCCTGGGAGGAGATGGGTGGGCAGACAAGGGCCCTCTATCTGAGACTGGGATGTGCAGGGGACCCCATGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS TCA 72 bp GCCAGTTTTGCAGGGAGAGCCAGGCATGGTATGTCCTaGAGTCCCGGGTCCTGGAGACTGGCCTGGCCATCT +
Preference number: 6 (lower is better)
Translates to: ASFAGRARHGMS*SPGSWRLAWPS
Trigger: AGATGGCCAGGCCAGTCTCCAGGACCCGGGACTTCAGGACATACCATGCCTGGCTCTCCCTGCAAAACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp AGTGAAGGGCGTTCGGCCTCCCCGGCTCTCTGCAGGTaGCCACCAGAGTTTAAGCCAAACAACCCAGGTTCC +
Preference number: 6 (lower is better)
Translates to: SEGRSASPALCR*PPEFKPNNPGS
Trigger: GGAACCTGGGTTGTTTGGCTTAAACTCTGGTGGGCACCTGCAGAGAGCCGGGGAGGCCGAACGCCCTTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS GCA 72 bp TGGTGCAGTGAAGGGCGTTCGGCCTCCCCGGCTCTCTaGAGGTGCCCACCAGAGTTTAAGCCAAACAACCCA +
Preference number: 6 (lower is better)
Translates to: WCSEGRSASPAL*RCPPEFKPNNP
Trigger: TGGGTTGTTTGGCTTAAACTCTGGTGGGCACCTGCAGAGAGCCGGGGAGGCCGAACGCCCTTCACTGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS GCA 72 bp GGAGGAGGTACCCTAGACATGGGCCATGGGGTCCCCTaGACATCCCAGTCTCAGATAGAGGGCCCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: GGGTLDMGHGVP*TSQSQIEGPCL
Trigger: CAGACAAGGGCCCTCTATCTGAGACTGGGATGTGCAGGGGACCCCATGGCCCATGTCTAGGGTACCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS CCA 72 bp TGGTGGCCCCAGCTGGTACCCAAGGTTCCCATCGCCTaGCCCAGCCCAGACGTTGCCAAGAGTATGAACAAG +
Preference number: 6 (lower is better)
Translates to: WWPQLVPKVPIA*PSPDVAKSMNK
Trigger: CTTGTTCATACTCTTGGCAACGTCTGGGCTGGGCCAGGCGATGGGAACCTTGGGTACCAGCTGGGGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS CAA 72 bp ACAGTGGAAGGGCATCTTGGGGACCACCGAGCAACTTaGCTAGGCCAGAGCCACAGGTACCCTCTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: TVEGHLGDHRAT*LGQSHRYPLCP
Trigger: GGGGCAGAGAGGGTACCTGTGGCTCTGGCCTAGCAAAGTTGCTCGGTGGTCCCCAAGATGCCCTTCCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS CAA 90 bp ACCCGGGCATCAGCTTGGCAGGGGCAGTGCCCCCGGATATCAAACTaGACCCAGACCTGGTGCATTGCAGTGCTCAGCTCTGCCAAAGCT +
Preference number: 6 (lower is better)
Translates to: TRASAWQGQCPRISN*TQTWCIAVLSSAKA
Trigger: AGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTGCCCCTGCCAAGCTGATGCCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518461.2
CDS GCA 72 bp TCCTCGACCTCAGGGCAGCCGCGTGGACATTCAAACTaGTCCGAGTGCCGTGTGAGCCATGTCTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SSTSGQPRGHSN*SECRVSHVFFS
Trigger: GCTGAAGAAGACATGGCTCACACGGCACTCGGAGCAGTTTGAATGTCCACGCGGCTGCCCTGAGGTCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp TTCCATGGAGGGCGCAGTACTCCGGAAGTGGCAGACTaGCAGCTAGGTTCTCCACCCTGCTGGTGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: FHGGRSTPEVAD*QLGSPPCWCPH
Trigger: ATGAGGACACCAGCAGGGTGGAGAACCTAGCTGCCAGTCTGCCACTTCCGGAGTACTGCGCCCTCCATGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp GGGCAGTGCCCCCGGATATCAAACTTGACCCAGACCTaGTGCATTGCAGTGCTCAGCTCTGCCAAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: GQCPRISNLTQT*CIAVLSSAKAG
Trigger: CCCAGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518461.2
CDS CAA 72 bp TGGGTAAGCATGGCCTCCTTCCAGCGCAGTCCCTCTTaGCTGCCCAGCCAGTTGACCTTCCTCTCCCCATTC +
Preference number: 6 (lower is better)
Translates to: WVSMASFQRSPS*LPSQLTFLSPF
Trigger: GAATGGGGAGAGGAAGGTCAACTGGCTGGGCAGCAAAGAGGGACTGCGCTGGAAGGAGGCCATGCTTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000522759.1
ENST00000680789.1
CDS CAA 90 bp TCTTGGGGTCCTTTCTGCTCATCATGCTGTCCCGAGTCCACATCCTaGTTCCCTATCGATGTGTCCCGCACCTCCTGCCAACCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: SWGPFCSSCCPESTS*FPIDVSRTSCQPPA
Trigger: GGCTGGGGGTTGGCAGGAGGTGCGGGACACATCGATAGGGAACAAGGATGTGGACTCGGGACAGCATGATGAGCAGAAAGGACCCCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 90 bp CTCCCTCTCCAGCTGCCTGGGCACAACTTTGGCATTGAGCCAGTTTaGCAGGGAGAGCCAGGCATGGTATGTCCTGAAGTCCCGGGTCCT +
Preference number: 6 (lower is better)
Translates to: LPLQLPGHNFGIEPV*QGEPGMVCPEVPGP
Trigger: AGGACCCGGGACTTCAGGACATACCATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGCCCAGGCAGCTGGAGAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 90 bp TGGACCCTAGGGGAGTCCCAGCTGGGTGCCAAGATTCCTTTGCCCTaGGAGATTCAGCTCCATCCTGGAGCTGAGCAGTGTTTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: WTLGESQLGAKIPLP*EIQLHPGAEQCFPG
Trigger: GCCTGGGAAACACTGCTCAGCTCCAGGATGGAGCTGAATCTCCAAGGGCAAAGGAATCTTGGCACCCAGCTGGGACTCCCCTAGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS TCA 72 bp TCGGATCCTTGTAGTAAAAGCCCTTGCTGCCTAAGCTaGAGGCAGAGGGCACTTTGGGCTGGCCCCCGGAGT +
Preference number: 6 (lower is better)
Translates to: SDPCSKSPCCLS*RQRALWAGPRS
Trigger: ACTCCGGGGGCCAGCCCAAAGTGCCCTCTGCCTTCAGCTTAGGCAGCAAGGGCTTTTACTACAAGGATCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS TCA 72 bp AGCCGCGTGGACATTCAAACTGCTCCGAGTGCCGTGTaGGCCATGTCTTCTTCAGCTTGGTGTGGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: SRVDIQTAPSAV*AMSSSAWCGGW
Trigger: CCAGCCACCACACCAAGCTGAAGAAGACATGGCTCACACGGCACTCGGAGCAGTTTGAATGTCCACGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp TCAGGGCAGCCGCGTGGACATTCAAACTGCTCCGAGTaGCGTGTGAGCCATGTCTTCTTCAGCTTGGTGTGG +
Preference number: 6 (lower is better)
Translates to: SGQPRGHSNCSE*RVSHVFFSLVW
Trigger: CCACACCAAGCTGAAGAAGACATGGCTCACACGGCACTCGGAGCAGTTTGAATGTCCACGCGGCTGCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp CCCCCGGATATCAAACTTGACCCAGACCTGGTGCATTaGAGTGCTCAGCTCTGCCAAAGCCTGGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: PPDIKLDPDLVH*SAQLCQSLAGD
Trigger: GTCTCCAGCCAGGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp CAGTGCCCCCGGATATCAAACTTGACCCAGACCTGGTaGATTGCAGTGCTCAGCTCTGCCAAAGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: QCPRISNLTQTW*IAVLSSAKAWL
Trigger: CAGCCAGGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp CAGTGCCCCCGGATATCAAACTTGACCCAGACCTGGTaGATTGCAGTGCTCAGCTCTGCCAAAGCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: QCPRISNLTQTW*IAVLSSAKAGG
Trigger: ACCCCCAGCTTTGGCAGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518461.2
CDS CAA 72 bp TCAGCTTGGCAGGGGCAGTGCCCCCGGATATCAAACTaGACCCAGACCTGGTGCATTGCAGTGCTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SAWQGQCPRISN*TQTWCIAVLSS
Trigger: AGAGCTGAGCACTGCAATGCACCAGGTCTGGGTCAAGTTTGATATCCGGGGGCACTGCCCCTGCCAAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000518461.2
ENST00000680789.1
CDS CAA 90 bp TGCTCTTGGTCCTGTGGGTGTCGCCATTGCAGGAAGGTTGTGGAGTaGGGGGCGTTTTCTGTGTTGATTCCTTCTGCTGGCCTGCATCCC +
Preference number: 6 (lower is better)
Translates to: CSWSCGCRHCRKVVE*GAFSVLIPSAGLHP
Trigger: GGGATGCAGGCCAGCAGAAGGAATCAACACAGAAAACGCCCCCAACTCCACAACCTTCCTGCAATGGCGACACCCACAGGACCAAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000518461.2
ENST00000680789.1
CDS CCA 72 bp CAGGTTCCGCAGCTGCCAAGGGCTCCTTTGCCAACCTaGGAATGCTCGGATCCTTGTAGTAAAAGCCCTTGC +
Preference number: 6 (lower is better)
Translates to: QVPQLPRAPLPT*ECSDPCSKSPC
Trigger: GCAAGGGCTTTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp GAATCGGGGGTCTCCTCTTTGATGCTCTTGGTCCTGTaGGTGTCGCCATTGCAGGAAGGTTGTGGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: ESGVSSLMLLVL*VSPLQEGCGVG
Trigger: CCCAACTCCACAACCTTCCTGCAATGGCGACACCCACAGGACCAAGAGCATCAAAGAGGAGACCCCCGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000517699.2
ENST00000518461.2
ENST00000680789.1
CDS CCA 72 bp TTTTCTGTGTTGATTCCTTCCTGGCTGGAGACAAACTaGGTCAGCATCAGGGAACAGGCAGCGTGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: FSVLIPSWLETN*VSIREQAACPA
Trigger: GGCCGGGCACGCTGCCTGTTCCCTGATGCTGACCCAGTTTGTCTCCAGCCAGGAAGGAATCAACACAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS CCA 72 bp AGTCATCTATGGAGGAGGTACCCTAGACATGGGCCATaGGGTCCCCTGCACATCCCAGTCTCAGATAGAGGG +
Preference number: 6 (lower is better)
Translates to: SHLWRRYPRHGP*GPLHIPVSDRG
Trigger: CCCTCTATCTGAGACTGGGATGTGCAGGGGACCCCATGGCCCATGTCTAGGGTACCTCCTCCATAGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS GCA 72 bp CTGGCCTGGCCATCTTGGGGTCCTTTCTGCTCATCATaGTGTCCCGAGTCCACATCCTTGTTCCCTATCGAT +
Preference number: 6 (lower is better)
Translates to: LAWPSWGPFCSS*CPESTSLFPID
Trigger: ATCGATAGGGAACAAGGATGTGGACTCGGGACAGCATGATGAGCAGAAAGGACCCCAAGATGGCCAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS GCA 72 bp AGCTGCCTGGGCACAACTTTGGCATTGAGCCAGTTTTaGAGGGAGAGCCAGGCATGGTATGTCCTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: SCLGTTLALSQF*RESQAWYVLKS
Trigger: GGACTTCAGGACATACCATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGCCCAGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CCA 72 bp CCTCTACCTCGGTGCTGCCTTCTCTTTTCATCACAGTaGAAGGGCATCTTGGGGACCACCGAGCAACTTTGC +
Preference number: 6 (lower is better)
Translates to: PLPRCCLLFSSQ*KGILGTTEQLC
Trigger: GCAAAGTTGCTCGGTGGTCCCCAAGATGCCCTTCCACTGTGATGAAAAGAGAAGGCAGCACCGAGGTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS CAA 72 bp CCTTTCTGCTCATCATGCTGTCCCGAGTCCACATCCTaGTTCCCTATCGATGTGTCCCGCACCTCCTGCCAA +
Preference number: 6 (lower is better)
Translates to: PFCSSCCPESTS*FPIDVSRTSCQ
Trigger: TTGGCAGGAGGTGCGGGACACATCGATAGGGAACAAGGATGTGGACTCGGGACAGCATGATGAGCAGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 72 bp CAGCTGCCTGGGCACAACTTTGGCATTGAGCCAGTTTaGCAGGGAGAGCCAGGCATGGTATGTCCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: QLPGHNFGIEPV*QGEPGMVCPEV
Trigger: GACTTCAGGACATACCATGCCTGGCTCTCCCTGCAAAACTGGCTCAATGCCAAAGTTGTGCCCAGGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 72 bp TCCTGTGGGTGTCGCCATTGCAGGAAGGTTGTGGAGTaGGGGGCGTTTTCTGTGTTGATTCCTTCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: SCGCRHCRKVVE*GAFSVLIPSAG
Trigger: GCCAGCAGAAGGAATCAACACAGAAAACGCCCCCAACTCCACAACCTTCCTGCAATGGCGACACCCACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000518461.2
ENST00000680789.1
CDS CAA 72 bp TCCTGTGGGTGTCGCCATTGCAGGAAGGTTGTGGAGTaGGGGGCGTTTTCTGTGTTGATTCCTTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SCGCRHCRKVVE*GAFSVLIPSWL
Trigger: CAGCCAGGAAGGAATCAACACAGAAAACGCCCCCAACTCCACAACCTTCCTGCAATGGCGACACCCACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS CAA 90 bp TGCTCTTGGTCCTGTGGGTGTCGCCATTGCAGGAAGGTTGTGGAGTaGGGGGCGTTTTCTGTGTTGATTCCTTCCTGGCTGGAGACAAAC +
Preference number: 6 (lower is better)
Translates to: CSWSCGCRHCRKVVE*GAFSVLIPSWLETN
Trigger: GTTTGTCTCCAGCCAGGAAGGAATCAACACAGAAAACGCCCCCAACTCCACAACCTTCCTGCAATGGCGACACCCACAGGACCAAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517699.2
CDS CCA 72 bp CAGGTTCCGCAGCTGCCAAGGGCTCCTTTGCCAACCTaGGAATGCTCGGATCCTTGTAGTAAAAGCCATTCT +
Preference number: 6 (lower is better)
Translates to: QVPQLPRAPLPT*ECSDPCSKSHS
Trigger: AGAATGGCTTTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519619.1
CDS CAA 72 bp CAAACAACCCAGGTTCCGCAGCTGCCAAGGGCTCCTTaGCCAACCTGGGAATGCTCGGATCCTTGTAGTAAA +
Preference number: 6 (lower is better)
Translates to: QTTQVPQLPRAP*PTWECSDPCSK
Trigger: TTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTGGGTTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS CAA 90 bp AGTTTAAGCCAAACAACCCAGGTTCCGCAGCTGCCAAGGGCTCCTTaGCCAACCTGGGAATGCTCGGATCCTTGTAGTAAAAGCCCTTGC +
Preference number: 6 (lower is better)
Translates to: SLSQTTQVPQLPRAP*PTWECSDPCSKSPC
Trigger: GCAAGGGCTTTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTGGGTTGTTTGGCTTAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000680789.1
CDS CAA 90 bp GAGTTTGTTTGGGGCTGGGGCAGCTCAGGTTGGCAGAACACACATTaGGCTGGAAGGAGCTTAGAAGGAAGGGATTCAAGGCCCTACAGT +
Preference number: 6 (lower is better)
Translates to: EFVWGWGSSGWQNTH*AGRSLEGRDSRPYS
Trigger: ACTGTAGGGCCTTGAATCCCTTCCTTCTAAGCTCCTTCCAGCCAAATGTGTGTTCTGCCAACCTGAGCTGCCCCAGCCCCAAACAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS TCA 72 bp CAGACGTCCCCACAAGGAAGTCTAAGAACTAAAGAGTaGATGCCTGGCACAGCCAAAGGGCATCTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: QTSPQGSLRTKE*MPGTAKGHLGS
Trigger: AGACCCCAGATGCCCTTTGGCTGTGCCAGGCATTCACTCTTTAGTTCTTAGACTTCCTTGTGGGGACGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519619.1
CDS TCA 72 bp CTTTGGAATGGCCAGAATTGTGTGCTAAGTGGTGGATaGGGAGAGAGCTGTGTGTCCCTGGGGAGACAACTC +
Preference number: 6 (lower is better)
Translates to: LWNGQNCVLSGG*GESCVSLGRQL
Trigger: GAGTTGTCTCCCCAGGGACACACAGCTCTCTCCTCATCCACCACTTAGCACACAATTCTGGCCATTCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS GCA 72 bp AAACAACCCAGGTTCCGCAGCTGCCAAGGGCTCCTTTaGCAACCTGGGAATGCTCGGATCCTTGTAGTAAAA +
Preference number: 6 (lower is better)
Translates to: KQPRFRSCQGLL*QPGNARILVVK
Trigger: TTTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTGGGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312841.9
ENST00000381418.9
ENST00000519619.1
ENST00000680789.1
CDS CCA 72 bp CTGAAGTCTTTGGAATGGCCAGAATTGTGTGCTAAGTaGTGGATGAGGAGAGAGCTGTGTGTCCCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: LKSLEWPELCAK*WMRRELCVPGE
Trigger: CTCCCCAGGGACACACAGCTCTCTCCTCATCCACCACTTAGCACACAATTCTGGCCATTCCAAAGACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS CAA 90 bp AGTTTAAGCCAAACAACCCAGGTTCCGCAGCTGCCAAGGGCTCCTTaGCCAACCTGGGAATGCTCGGATCCTTGTAGTAAAAGCCATTCT +
Preference number: 6 (lower is better)
Translates to: SLSQTTQVPQLPRAP*PTWECSDPCSKSHS
Trigger: AGAATGGCTTTTACTACAAGGATCCGAGCATTCCCAGGTTGGCAAAGGAGCCCTTGGCAGCTGCGGAACCTGGGTTGTTTGGCTTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519619.1
CDS GCA 72 bp ATGGTACCCCTTTCTGCAAATCCGAGGGAGACGTCCTaGATAATCCCAGTTCATAAACTGTCTACCAGGACT +
Preference number: 6 (lower is better)
Translates to: MVPLSANPRETS*IIPVHKLSTRT
Trigger: AGTCCTGGTAGACAGTTTATGAACTGGGATTATGCAGGACGTCTCCCTCGGATTTGCAGAAAGGGGTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS TCA 72 bp GGGTCTGTTTGGGCCATTTGGTGTCCTGTGCCATACTaGGTTTTAAGTGTTTTAACATCTCATCCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: GSVWAIWCPVPY*VLSVLTSHPWE
Trigger: CTCCCAGGGATGAGATGTTAAAACACTTAAAACTCAGTATGGCACAGGACACCAAATGGCCCAAACAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522759.1
CDS CAA 72 bp GGACTTCTTCATCTGAAGTCTTTGGAATGGCCAGAATaGTGTGCTAAGTGGTGGATGAGGAGAGAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: GLLHLKSLEWPE*CAKWWMRRELC
Trigger: ACACAGCTCTCTCCTCATCCACCACTTAGCACACAATTCTGGCCATTCCAAAGACTTCAGATGAAGAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522016.1
CDS CAA 90 bp TCCCAGTTCATAAACTGTCTACCAGGACTTCTTCATCTGAAGTCTTaGGAATGGCCAGAATTGTGTGCTAAGTGGTGGATGAGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: SQFINCLPGLLHLKS*EWPELCAKWWMRRE
Trigger: CTCTCTCCTCATCCACCACTTAGCACACAATTCTGGCCATTCCAAAGACTTCAGATGAAGAAGTCCTGGTAGACAGTTTATGAACTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522016.1