Pregenerated sensors for HPYR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000253521Ensembl transcript IDs: ENST00000520457.1, ENST00000648355.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCAGCAGGGGGTCAGGGGATATGTCACACTGGCTGTCAGGGATGGTaGCAACCTTGGTGCTGTGGGCAGGGTGAGTGCCATGGGAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: PAGGQGICHTGCQGW*QPWCCGQGECHGRG Trigger: ACCTCTCCCATGGCACTCACCCTGCCCACAGCACCAAGGTTGTCACCATCCCTGACAGCCAGTGTGACATATCCCCTGACCCCCTGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 90 bp | ATAGAGATTTCAGAGGCATCCACCCAGAGCTGGTGGCAGAAGCCATaGGACTGGGCCCTGGGAGTGGGTGCACATGGAGTAGAGGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: IEISEASTQSWWQKP*DWALGVGAHGVEGG Trigger: TCCACCCTCTACTCCATGTGCACCCACTCCCAGGGCCCAGTCTCATGGCTTCTGCCACCAGCTCTGGGTGGATGCCTCTGAAATCTCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 90 bp | AATTCTGGGGAAGGTGGAAACCCTCCCCAAGTCCAAGTTCCCAGATaGCGGCCATGCCTGCAGGTCTTTCTAAGCATAGCAGCCTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: NSGEGGNPPQVQVPR*RPCLQVFLSIAASD Trigger: GTCTGAGGCTGCTATGCTTAGAAAGACCTGCAGGCATGGCCGTCATCTGGGAACTTGGACTTGGGGAGGGTTTCCACCTTCCCCAGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CCA 90 bp | CCCTCCTCCTGCCCTGTTCTAAGGGGTAGAGCTTACTCTTCCAGATaGCCCCACCTAAACCTAAACCTCACAAGGTCAGCCTGCAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: PSSCPVLRGRAYSSR*PHLNLNLTRSACSK Trigger: TTTGCTGCAGGCTGACCTTGTGAGGTTTAGGTTTAGGTGGGGCCATCTGGAAGAGTAAGCTCTACCCCTTAGAACAGGGCAGGAGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS TCA 90 bp | TTTCCATCCAAATGCATCAGGAAAGCTGTGACAGGCTGCAAAGGGTaGCAGACACACACCACATGCTGCAAGTCAGCTGTCACATGGGGG | + |
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Preference number: 5 (lower is better) Translates to: FPSKCIRKAVTGCKG*QTHTTCCKSAVTWG Trigger: CCCCCATGTGACAGCTGACTTGCAGCATGTGGTGTGTGTCTGTCACCCTTTGCAGCCTGTCACAGCTTTCCTGATGCATTTGGATGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 90 bp | CTGGGAATTCAGGAGAAGAGATTGGGCACAGAATGCGTCATTGTCTaGCAACGTCCTACAGCTCTGTTGGTTACCCAAGGCAGCTATTGC | + |
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Preference number: 5 (lower is better) Translates to: LGIQEKRLGTECVIV*QRPTALLVTQGSYC Trigger: GCAATAGCTGCCTTGGGTAACCAACAGAGCTGTAGGACGTTGTCAGACAATGACGCATTCTGTGCCCAATCTCTTCTCCTGAATTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS TCA 90 bp | AGGAGTTTCACATGGCTGGTGAGGCCTCACAATCATGGCAGAAGATaGAGGAAGAACAAAGGGACTTCTTTCTCTCTGCGGCTCCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RSFTWLVRPHNHGRR*RKNKGTSFSLRLPE Trigger: TTCTGGGAGCCGCAGAGAGAAAGAAGTCCCTTTGTTCTTCCTTCATCTTCTGCCATGATTGTGAGGCCTCACCAGCCATGTGAAACTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CCA 90 bp | GATTTCAAAGTTGTGTTCTCACCCATTAGGCAAAGGTGCCAGGCTTaGGTTCAGGATGAGACCCCTACCTGCTATTTGTTAAGTGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: DFKVVFSPIRQRCQA*VQDETPTCYLLSGS Trigger: ACTTCCACTTAACAAATAGCAGGTAGGGGTCTCATCCTGAACCCAAGCCTGGCACCTTTGCCTAATGGGTGAGAACACAACTTTGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 90 bp | GGTAGCTACTTAAATAAAAATACCACTGCCTTCCTAACTTGGAGGTaGATCCTGGGAATTCAGGAGAAGAGATTGGGCACAGAATGCGTC | + |
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Preference number: 5 (lower is better) Translates to: GSYLNKNTTAFLTWR*ILGIQEKRLGTECV Trigger: GACGCATTCTGTGCCCAATCTCTTCTCCTGAATTCCCAGGATTCACCTCCAAGTTAGGAAGGCAGTGGTATTTTTATTTAAGTAGCTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS TCA 90 bp | GACAACGTCCTACAGCTCTGTTGGTTACCCAAGGCAGCTATTGCATaGACAATCTCTAAACAAAATAAGACCACGACTGTTCACAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: DNVLQLCWLPKAAIA*TISKQNKTTTVHKK Trigger: TTTCTTGTGAACAGTCGTGGTCTTATTTTGTTTAGAGATTGTTCATGCAATAGCTGCCTTGGGTAACCAACAGAGCTGTAGGACGTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS GCA 90 bp | CATGGGGTCACATGGCATATATTCAATTCTTCCAGCAACAAGTCATaGCATGTGTTAAATGCTGTCTACCAGGAATACTTCTTAGAGACT | + |
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Preference number: 5 (lower is better) Translates to: HGVTWHIFNSSSNKS*HVLNAVYQEYFLET Trigger: AGTCTCTAAGAAGTATTCCTGGTAGACAGCATTTAACACATGGCATGACTTGTTGCTGGAAGAATTGAATATATGCCATGTGACCCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS TCA 72 bp | TCAGAGGCATCCACCCAGAGCTGGTGGCAGAAGCCATaGGACTGGGCCCTGGGAGTGGGTGCACATGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: SEASTQSWWQKP*DWALGVGAHGV Trigger: TACTCCATGTGCACCCACTCCCAGGGCCCAGTCTCATGGCTTCTGCCACCAGCTCTGGGTGGATGCCTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 72 bp | GGTCAGGGGATATGTCACACTGGCTGTCAGGGATGGTaGCAACCTTGGTGCTGTGGGCAGGGTGAGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GQGICHTGCQGW*QPWCCGQGECH Trigger: ATGGCACTCACCCTGCCCACAGCACCAAGGTTGTCACCATCCCTGACAGCCAGTGTGACATATCCCCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 72 bp | GGTGAGTGCCATGGGAGAGGTGTGGCACATAGCAGGTaGGGGCCCAGATCTGATGTGTTCAGCCTTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GECHGRGVAHSR*GPRSDVFSLAL Trigger: AAGGGCAAGGCTGAACACATCAGATCTGGGCCCCAACCTGCTATGTGCCACACCTCTCCCATGGCACTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 72 bp | GAAGGTGGAAACCCTCCCCAAGTCCAAGTTCCCAGATaGCGGCCATGCCTGCAGGTCTTTCTAAGCATAGCA | + |
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Preference number: 6 (lower is better) Translates to: EGGNPPQVQVPR*RPCLQVFLSIA Trigger: TGCTATGCTTAGAAAGACCTGCAGGCATGGCCGTCATCTGGGAACTTGGACTTGGGGAGGGTTTCCACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CCA 72 bp | GGTACTGTGAGCCACGCTTATCAATTCTGGGGAAGGTaGAAACCCTCCCCAAGTCCAAGTTCCCAGATGACG | + |
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Preference number: 6 (lower is better) Translates to: GTVSHAYQFWGR*KPSPSPSSQMT Trigger: CGTCATCTGGGAACTTGGACTTGGGGAGGGTTTCCACCTTCCCCAGAATTGATAAGCGTGGCTCACAGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CAA 90 bp | CACATAGCAGGTTGGGGCCCAGATCTGATGTGTTCAGCCTTGCCCTaGGGTAACACTCAAAGGGGGCATTTATATCAAGGAGGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: HIAGWGPDLMCSALP*GNTQRGHLYQGGLR Trigger: CCTCAGCCCTCCTTGATATAAATGCCCCCTTTGAGTGTTACCCAAGGGCAAGGCTGAACACATCAGATCTGGGCCCCAACCTGCTATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 90 bp | GTGTGGCACATAGCAGGTTGGGGCCCAGATCTGATGTGTTCAGCCTaGCCCTTGGGTAACACTCAAAGGGGGCATTTATATCAAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: VWHIAGWGPDLMCSA*PLGNTQRGHLYQGG Trigger: CCCTCCTTGATATAAATGCCCCCTTTGAGTGTTACCCAAGGGCAAGGCTGAACACATCAGATCTGGGCCCCAACCTGCTATGTGCCACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 72 bp | GTAACACTCAAAGGGGGCATTTATATCAAGGAGGGCTaGGGTTGGGGCCACATTGGCACAGCAGATGATGGG | + |
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Preference number: 6 (lower is better) Translates to: VTLKGGIYIKEG*GWGHIGTADDG Trigger: CCCATCATCTGCTGTGCCAATGTGGCCCCAACCTCAGCCCTCCTTGATATAAATGCCCCCTTTGAGTGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CCA 72 bp | AACTGGAATCATGGGACCTTTGAAGCGAATCTTCCCTaGCACCTGATATGGTTCCTCGTGCCTCCTAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: NWNHGTFEANLP*HLIWFLVPPRC Trigger: GCACCTAGGAGGCACGAGGAACCATATCAGGTGCCAGGGAAGATTCGCTTCAAAGGTCCCATGATTCCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CCA 72 bp | GTGGTAGAAGGCCAAGAATCCCAAAGTGGAAGAACTTaGAGTCCGATGTTCATGGGCAGGAAGCATCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: VVEGQESQSGRT*SPMFMGRKHPA Trigger: CGCTGGATGCTTCCTGCCCATGAACATCGGACTCCAAGTTCTTCCACTTTGGGATTCTTGGCCTTCTACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 72 bp | CAGGAGAAGAGATTGGGCACAGAATGCGTCATTGTCTaGCAACGTCCTACAGCTCTGTTGGTTACCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: QEKRLGTECVIV*QRPTALLVTQG Trigger: GCCTTGGGTAACCAACAGAGCTGTAGGACGTTGTCAGACAATGACGCATTCTGTGCCCAATCTCTTCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS TCA 72 bp | AAATGCATCAGGAAAGCTGTGACAGGCTGCAAAGGGTaGCAGACACACACCACATGCTGCAAGTCAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KCIRKAVTGCKG*QTHTTCCKSAV Trigger: GACAGCTGACTTGCAGCATGTGGTGTGTGTCTGTCACCCTTTGCAGCCTGTCACAGCTTTCCTGATGCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CCA 72 bp | GTCTGTTTAGGTACTGTGAGCCACGCTTATCAATTCTaGGGAAGGTGGAAACCCTCCCCAAGTCCAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VCLGTVSHAYQF*GRWKPSPSPSS Trigger: GGAACTTGGACTTGGGGAGGGTTTCCACCTTCCCCAGAATTGATAAGCGTGGCTCACAGTACCTAAACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CAA 72 bp | GGTTGGGGCCCAGATCTGATGTGTTCAGCCTTGCCCTaGGGTAACACTCAAAGGGGGCATTTATATCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GWGPDLMCSALP*GNTQRGHLYQG Trigger: TCCTTGATATAAATGCCCCCTTTGAGTGTTACCCAAGGGCAAGGCTGAACACATCAGATCTGGGCCCCAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 72 bp | TGTGGTAGAAGGCCAAGAATCCCAAAGTGGAAGAACTaGGAGTCCGATGTTCATGGGCAGGAAGCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CGRRPRIPKWKN*ESDVHGQEASS Trigger: GCTGGATGCTTCCTGCCCATGAACATCGGACTCCAAGTTCTTCCACTTTGGGATTCTTGGCCTTCTACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 72 bp | GGTAGCACTTTCCATCCAAATGCATCAGGAAAGCTGTaGCAGGCTGCAAAGGGTGACAGACACACACCACAT | + |
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Preference number: 6 (lower is better) Translates to: GSTFHPNASGKL*QAAKGDRHTPH Trigger: ATGTGGTGTGTGTCTGTCACCCTTTGCAGCCTGTCACAGCTTTCCTGATGCATTTGGATGGAAAGTGCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CCA 72 bp | GTTGTGTTCTCACCCATTAGGCAAAGGTGCCAGGCTTaGGTTCAGGATGAGACCCCTACCTGCTATTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: VVFSPIRQRCQA*VQDETPTCYLL Trigger: TAACAAATAGCAGGTAGGGGTCTCATCCTGAACCCAAGCCTGGCACCTTTGCCTAATGGGTGAGAACACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CCA 72 bp | CCTTCAGTCTGTGGTAGAAGGCCAAGAATCCCAAAGTaGAAGAACTTGGAGTCCGATGTTCATGGGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PSVCGRRPRIPK*KNLESDVHGQE Trigger: TTCCTGCCCATGAACATCGGACTCCAAGTTCTTCCACTTTGGGATTCTTGGCCTTCTACCACAGACTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 72 bp | GCATTTATATCAAGGAGGGCTGAGGTTGGGGCCACATaGGCACAGCAGATGATGGGGATTAAATGCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: AFISRRAEVGAT*AQQMMGIKCRQ Trigger: CTGTCTGCATTTAATCCCCATCATCTGCTGTGCCAATGTGGCCCCAACCTCAGCCCTCCTTGATATAAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 90 bp | GCCACATTGGCACAGCAGATGATGGGGATTAAATGCAGACAGGGTTaGGAGAGGATTGGAGCTGCTTTAGTTGAGGTAACGTGTACAGGA | + |
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Preference number: 6 (lower is better) Translates to: ATLAQQMMGIKCRQG*ERIGAALVEVTCTG Trigger: TCCTGTACACGTTACCTCAACTAAAGCAGCTCCAATCCTCTCCAAACCCTGTCTGCATTTAATCCCCATCATCTGCTGTGCCAATGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 90 bp | GTGGTAAACGACAGAACCGGATTTGAGCCAAGCTTGATTTCAAAGTaGTGTTCTCACCCATTAGGCAAAGGTGCCAGGCTTGGGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VVNDRTGFEPSLISK*CSHPLGKGARLGFR Trigger: CCTGAACCCAAGCCTGGCACCTTTGCCTAATGGGTGAGAACACAACTTTGAAATCAAGCTTGGCTCAAATCCGGTTCTGTCGTTTACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CCA 72 bp | CTTGGAGGTGAATCCTGGGAATTCAGGAGAAGAGATTaGGCACAGAATGCGTCATTGTCTGACAACGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LGGESWEFRRRD*AQNASLSDNVL Trigger: TAGGACGTTGTCAGACAATGACGCATTCTGTGCCCAATCTCTTCTCCTGAATTCCCAGGATTCACCTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CCA 72 bp | GGTAGATACATTGGCCTGACATGCGTCAGTTGCAGATaGGGTAGCACTTTCCATCCAAATGCATCAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: GRYIGLTCVSCR*GSTFHPNASGK Trigger: CTTTCCTGATGCATTTGGATGGAAAGTGCTACCCCATCTGCAACTGACGCATGTCAGGCCAATGTATCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 72 bp | GAATTCAGGAGAAGAGATTGGGCACAGAATGCGTCATaGTCTGACAACGTCCTACAGCTCTGTTGGTTACCC | + |
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Preference number: 6 (lower is better) Translates to: EFRRRDWAQNAS*SDNVLQLCWLP Trigger: GGGTAACCAACAGAGCTGTAGGACGTTGTCAGACAATGACGCATTCTGTGCCCAATCTCTTCTCCTGAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CAA 72 bp | GCACAGCAGATGATGGGGATTAAATGCAGACAGGGTTaGGAGAGGATTGGAGCTGCTTTAGTTGAGGTAACG | + |
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Preference number: 6 (lower is better) Translates to: AQQMMGIKCRQG*ERIGAALVEVT Trigger: CGTTACCTCAACTAAAGCAGCTCCAATCCTCTCCAAACCCTGTCTGCATTTAATCCCCATCATCTGCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 72 bp | GACAGAACCGGATTTGAGCCAAGCTTGATTTCAAAGTaGTGTTCTCACCCATTAGGCAAAGGTGCCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: DRTGFEPSLISK*CSHPLGKGARL Trigger: AAGCCTGGCACCTTTGCCTAATGGGTGAGAACACAACTTTGAAATCAAGCTTGGCTCAAATCCGGTTCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 90 bp | GTTGAAAAGATGGTGGTAAACGACAGAACCGGATTTGAGCCAAGCTaGATTTCAAAGTTGTGTTCTCACCCATTAGGCAAAGGTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VEKMVVNDRTGFEPS*ISKLCSHPLGKGAR Trigger: CCTGGCACCTTTGCCTAATGGGTGAGAACACAACTTTGAAATCAAGCTTGGCTCAAATCCGGTTCTGTCGTTTACCACCATCTTTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 72 bp | GAATACTTCTTAGAGACTCAGGGCCCAAGGCTTTTATaGTCTGCCTCTACCTGGCACATACCAAAATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: EYFLETQGPRLL*SASTWHIPKFQ Trigger: CTGGAATTTTGGTATGTGCCAGGTAGAGGCAGACAATAAAAGCCTTGGGCCCTGAGTCTCTAAGAAGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CAA 72 bp | GACTTCTTTCTCTCTGCGGCTCCCAGAATGATGCAATaGACAACGTTTTTAAGACACAGCAGAAGGCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: DFFLSAAPRMMQ*TTFLRHSRRLS Trigger: ACTAAGCCTTCTGCTGTGTCTTAAAAACGTTGTCAATTGCATCATTCTGGGAGCCGCAGAGAGAAAGAAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS CAA 90 bp | TGTCTGACAACGTCCTACAGCTCTGTTGGTTACCCAAGGCAGCTATaGCATGAACAATCTCTAAACAAAATAAGACCACGACTGTTCACA | + |
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Preference number: 6 (lower is better) Translates to: CLTTSYSSVGYPRQL*HEQSLNKIRPRLFT Trigger: TGTGAACAGTCGTGGTCTTATTTTGTTTAGAGATTGTTCATGCAATAGCTGCCTTGGGTAACCAACAGAGCTGTAGGACGTTGTCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CAA 90 bp | GAACAAAGGGACTTCTTTCTCTCTGCGGCTCCCAGAATGATGCAATaGACAACGTTTTTAAGACACAGCAGAAGGCTTAGTTTTGATCAC | + |
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Preference number: 6 (lower is better) Translates to: EQRDFFLSAAPRMMQ*TTFLRHSRRLSFDH Trigger: GTGATCAAAACTAAGCCTTCTGCTGTGTCTTAAAAACGTTGTCAATTGCATCATTCTGGGAGCCGCAGAGAGAAAGAAGTCCCTTTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS GCA 72 bp | CAATTCTTCCAGCAACAAGTCATGCCATGTGTTAAATaGTGTCTACCAGGAATACTTCTTAGAGACTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: QFFQQQVMPCVK*CLPGILLRDSG Trigger: CCCTGAGTCTCTAAGAAGTATTCCTGGTAGACAGCATTTAACACATGGCATGACTTGTTGCTGGAAGAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CAA 72 bp | ACGTCCTACAGCTCTGTTGGTTACCCAAGGCAGCTATaGCATGAACAATCTCTAAACAAAATAAGACCACGA | + |
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Preference number: 6 (lower is better) Translates to: TSYSSVGYPRQL*HEQSLNKIRPR Trigger: TCGTGGTCTTATTTTGTTTAGAGATTGTTCATGCAATAGCTGCCTTGGGTAACCAACAGAGCTGTAGGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS CAA 72 bp | ATGGTGGTAAACGACAGAACCGGATTTGAGCCAAGCTaGATTTCAAAGTTGTGTTCTCACCCATTAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: MVVNDRTGFEPS*ISKLCSHPLGK Trigger: TTTGCCTAATGGGTGAGAACACAACTTTGAAATCAAGCTTGGCTCAAATCCGGTTCTGTCGTTTACCACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648355.1 |
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| CDS TCA 72 bp | CTACAGCTCTGTTGGTTACCCAAGGCAGCTATTGCATaGACAATCTCTAAACAAAATAAGACCACGACTGTT | + |
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Preference number: 6 (lower is better) Translates to: LQLCWLPKAAIA*TISKQNKTTTV Trigger: AACAGTCGTGGTCTTATTTTGTTTAGAGATTGTTCATGCAATAGCTGCCTTGGGTAACCAACAGAGCTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS TCA 72 bp | TTAAATAAAAATACCACTGCCTTCCTAACTTGGAGGTaGATCCTGGGAATTCAGGAGAAGAGATTGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: LNKNTTAFLTWR*ILGIQEKRLGT Trigger: TGTGCCCAATCTCTTCTCCTGAATTCCCAGGATTCACCTCCAAGTTAGGAAGGCAGTGGTATTTTTATTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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| CDS GCA 72 bp | ACATGGCATATATTCAATTCTTCCAGCAACAAGTCATaGCATGTGTTAAATGCTGTCTACCAGGAATACTTC | + |
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Preference number: 6 (lower is better) Translates to: TWHIFNSSSNKS*HVLNAVYQEYF Trigger: GAAGTATTCCTGGTAGACAGCATTTAACACATGGCATGACTTGTTGCTGGAAGAATTGAATATATGCCATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520457.1 |
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