RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HPSE (Homo sapiens)

Ensembl gene IDs: ENSG00000173083

Ensembl transcript IDs: ENST00000311412.10, ENST00000405413.6, ENST00000507150.5, ENST00000508891.5, ENST00000509906.5, ENST00000512196.5, ENST00000513463.1, ENST00000680713.1, ENST00000681769.1

Found 608 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAAAGATGGCAGAGCAGAGAGCTGGGAAGAACCCAGATCCCTGGTaGCGTACTGAAGTGCTGGAGCCTGGCCTGTTTGAACGTCTAGTT +
Preference number: 1 (lower is better)
Translates to: LKMAEQRAGKNPDPW*RTEVLEPGLFERLV
Trigger: AACTAGACGTTCAAACAGGCCAGGCTCCAGCACTTCAGTACGTCACCAGGGATCTGGGTTCTTCCCAGCTCTCTGCTCTGCCATCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR GCA 90 bp CTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCTTaGCAGGCCTGGTGCTCTCAACCACCTGGAAAACTTTTTGCACAG +
Preference number: 1 (lower is better)
Translates to: LRLHMQSLFLLTRPS*QAWCSQPPGKLFAQ
Trigger: CTGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR TCA 90 bp TCCAAAGAATACTTGCCTCATCACCACTTCTATTCCCATTCGGGCTaGCAGGCCCAATTTATCCAGCCACATAAAGCCAGCTGCAAAGGT +
Preference number: 1 (lower is better)
Translates to: SKEYLPHHHFYSHSG*QAQFIQPHKASCKG
Trigger: ACCTTTGCAGCTGGCTTTATGTGGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAGGCAAGTATTCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR TCA 90 bp GAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTaGTCATCCACCATCTTTAGAGTTAGACCATTGAGTTGGACAGAT +
Preference number: 1 (lower is better)
Translates to: ELPGRRGFSIKGGKV*SSTIFRVRPLSWTD
Trigger: ATCTGTCCAACTCAATGGTCTAACTCTAAAGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR CCA 90 bp TGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATaGAAAACCAAATACTGCATGTTCTCACTTATAAGTGGAAGCTTA +
Preference number: 1 (lower is better)
Translates to: WTELGAVILREVTQE*KTKYCMFSLISGSL
Trigger: TAAGCTTCCACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR TCA 90 bp AACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATTTCTTaGACAGAAGAGATAGCCAATAATCAGGTAAAGGATCGAAGTTTT +
Preference number: 1 (lower is better)
Translates to: NLARLPLTPWCPPIS*TEEIANNQVKDRSF
Trigger: AAAACTTCGATCCTTTACCTGATTATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR GCA 90 bp GTCCCAGTGTCTCTCAAGCACCCACTAGTTGCTTTGCAAGGTATCTaGTTCCTTTCCTATAACTTGAGTTGCTTTACTCTTAGTATACTT +
Preference number: 1 (lower is better)
Translates to: VPVSLKHPLVALQGI*FLSYNLSCFTLSIL
Trigger: AAGTATACTAAGAGTAAAGCAACTCAAGTTATAGGAAAGGAAGCAGATACCTTGCAAAGCAACTAGTGGGTGCTTGAGAGACACTGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR GCA 90 bp TGTACCATGGACTATTACTCAGCCATAAAGAAGAATAATGTATTTTaGAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGT +
Preference number: 1 (lower is better)
Translates to: CTMDYYSAIKKNNVF*SNLDGTGGCYPKGS
Trigger: ACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGAGTAATAGTCCATGGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR TCA 90 bp TTCTCTTTTACAACCAGTTTCACGGTAACGGCAGTATGCTTTTTCTaGTGGGTGCCTGTAGAGATGGCACATGAAGGAAAGAATTCTAAA +
Preference number: 1 (lower is better)
Translates to: FSFTTSFTVTAVCFF*WVPVEMAHEGKNSK
Trigger: TTTAGAATTCTTTCCTTCATGTGCCATCTCTACAGGCACCCATCAGAAAAAGCATACTGCCGTTACCGTGAAACTGGTTGTAAAAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR CAA 90 bp CAAAGGTGTCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTaGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAA +
Preference number: 2 (lower is better)
Translates to: QRCRIARALRLHMQS*FLLTRPSCQAWCSQ
Trigger: TTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGACACCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR GCA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGTCTTGCCAGGCCTGGTaGTCTCAACCACCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQSCQAW*SQPPGK
Trigger: TTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGA...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR TCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACGGCGGGTGGATCACTTaGGGACAGGAGTTCGAGGAC +
Preference number: 2 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENGGWIT*GQEFED
Trigger: GTCCTCGAACTCCTGTCCTCAAGTGATCCACCCGCC...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CCA 90 bp ATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTACCTTCTTGCCAGGCCTaGTGCTCTCAACCACCTGGA +
Preference number: 2 (lower is better)
Translates to: MRKLASPVNFLAGEVFPLPSCQA*CSQPPG
Trigger: TCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGG...TAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR CAA 90 bp GCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCTaGCCAGGCCTGGTGCTCTCAACCACCTGGAAAACTTTTTGCACA +
Preference number: 2 (lower is better)
Translates to: APPPYAELVSPNQTF*PGLVLSTTWKTFCT
Trigger: TGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR GCA 90 bp CTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCACCTAACCAGACCTTCTTaGCAGGCCTGGTGCTCTCAA +
Preference number: 2 (lower is better)
Translates to: LITTSIPIRADRPNLSSHLTRPS*QAWCSQ
Trigger: TTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAG...GTGGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR TCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTATCCCTGGTGACGTACTaGAGTGCTGGAGCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: DMRRHEERFAVRSSEKELSLVTY*SAGAWP
Trigger: AGGCCAGGCTCCAGCACTTCAGTACGTCACCAGGGA...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR CCA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGCCATGTTGGCCAGGCTaGTATCAAATTCCTCACGTC +
Preference number: 2 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQPCWPG*YQIPHV
Trigger: GACGTGAGGAATTTGATACCAGCCTGGCCAACATGG...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR TCA 90 bp CTTGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGTCAGTGTTTGTGCAATaGAGGTATACTCGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: LVSPNQTFLPGLVLSTTWSVFVQ*RYTRSF
Trigger: GAAGCTTCGAGTATACCTTCATTGCACAAACACTGA...CCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR GCA 90 bp CTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCCACCATCTCTAACCAGACCTTCTTaGCAGGCCTGGTGCTCTCAA +
Preference number: 2 (lower is better)
Translates to: LAGEVFPLKVARFDHPPSLTRPS*QAWCSQ
Trigger: TTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAG...AGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR CCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACGTGGTCCTAGCTACTTaGGAGGCTAAGCAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENVVLAT*EAKQED
Trigger: ATCCTCCTGCTTAGCCTCCCAAGTAGCTAGGACCAC...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CCA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGGGGGTTTCACCATGTTaGCCAGGCTGGTATCAAATT +
Preference number: 2 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQGVSPC*PGWYQI
Trigger: AATTTGATACCAGCCTGGCCAACATGGTGAAACCCC...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR TCA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAGCTGGCAAGCCCAGTaGACTTCCTGGCCGGAGAGG +
Preference number: 2 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCSWQAQ*TSWPER
Trigger: CCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCT...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR TCA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCATGCTTAAAGTTGCAGTaGGCCAAGATCGCACCATGG +
Preference number: 2 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSCLKLQ*AKIAPW
Trigger: CCATGGTGCGATCTTGGCTCACTGCAACTTTAAGCA...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR TCA 90 bp TATATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCAACCGCAAGTACTTGGTaGCATTATGGAGGTTTATGG +
Preference number: 2 (lower is better)
Translates to: YMRKLASPVNFLAGEVFPTASTW*HYGGLW
Trigger: CCATAAACCTCCATAATGTCACCAAGTACTTGCGGT...TGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR TCA 90 bp CTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCACTTGGAAAGTAATCCATaGGGTCCCAAAGGTCTTAGA +
Preference number: 2 (lower is better)
Translates to: LITTSIPIRADRPNLSSHLESNP*GPKGLR
Trigger: TCTAAGACCTTTGGGACCTCATGGATTACTTTCCAA...GTGGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR CCA 90 bp GCTTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAGTGCTCTCAACCACCTaGAAAACTTTTTGCACAGAT +
Preference number: 2 (lower is better)
Translates to: ASFSLNLARLPLTPWCPPVLSTT*KTFCTD
Trigger: ATCTGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCAC...TGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR TCA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTCAGTGTTTGTGCAATaGAGGTATACTCGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVSVFVQ*RYTRSF
Trigger: GAAGCTTCGAGTATACCTTCATTGCACAAACACTGA...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR TCA 90 bp TTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATACCGCAAGTACTTGGTaGCATTATGGAGGTTTATGG +
Preference number: 2 (lower is better)
Translates to: FLLFEPCTLAINTLVPTNTASTW*HYGGLW
Trigger: CCATAAACCTCCATAATGTCACCAAGTACTTGCGGT...ATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR GCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAGCACCCACTAGTTaGTTTGCAAGGTATCTGCTT +
Preference number: 2 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENQAPTS*FARYLL
Trigger: AAGCAGATACCTTGCAAAGCAACTAGTGGGTGCTTG...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CCA 90 bp AGCTTAGCTGTAGGTACACAAGAACATACACAGTGGTATAAGGGATGTTGGAGAGTGGTCCTAGCTACTTaGGAGGCTAAGCAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: SLAVGTQEHTQWYKGCWRVVLAT*EAKQED
Trigger: ATCCTCCTGCTTAGCCTCCCAAGTAGCTAGGACCAC...TCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR CAA 90 bp TGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTTaGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATT +
Preference number: 2 (lower is better)
Translates to: CQCLCNEGILEASFS*NLARLPLTPWCPPI
Trigger: AATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR TCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATTCAGTGTTTGTGCAATaGAGGTATACTCGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDSVFVQ*RYTRSF
Trigger: GAAGCTTCGAGTATACCTTCATTGCACAAACACTGA...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR TCA 90 bp CTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCCACCATCTTTGGAAAGTAATCCATaGGGTCCCAAAGGTCTTAGA +
Preference number: 2 (lower is better)
Translates to: LAGEVFPLKVARFDHPPSLESNP*GPKGLR
Trigger: TCTAAGACCTTTGGGACCTCATGGATTACTTTCCAA...AGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR TCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATAAAGGTGGCAAGGTTTaGTCATCCACCATCTTTAGA +
Preference number: 2 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDKGGKV*SSTIFR
Trigger: TCTAAAGATGGTGGATGATCAAACCTTGCCACCTTT...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR CAA 90 bp CTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCTCGTaGTTGTTGGCAGTGACTGGTGAAATGGCCACATTACCCATTTCT +
Preference number: 2 (lower is better)
Translates to: LSIPKGYSETIIGTS*LLAVTGEMATLPIS
Trigger: AGAAATGGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR TCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTAGTTAAAAGGCTGCAGTaGTCTATGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: DMRRHEERFAVRSSEKELVKRLQ*SMIAPL
Trigger: CAGTGGTGCAATCATAGATCACTGCAGCCTTTTAAC...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR TCA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCGTTAAAAGGCTGCAGTaGTCTATGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGVKRLQ*SMIAPL
Trigger: CAGTGGTGCAATCATAGATCACTGCAGCCTTTTAAC...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR TCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTGGAGCCTGGCCTGTTTaGACGTCTAGTTATGTGGGA +
Preference number: 2 (lower is better)
Translates to: YPKGSNSGMENQILHVLTGAWPV*TSSYVG
Trigger: TCCCACATAACTAGACGTTCAAACAGGCCAGGCTCC...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR TCA 90 bp GTAGTTTCCTGCTCCAAAGAATACTTGCCTCATCACCACTTCTATTCCCATTCGACCGCAAGTACTTGGTaGCATTATGGAGGTTTATGG +
Preference number: 2 (lower is better)
Translates to: VVSCSKEYLPHHHFYSHSTASTW*HYGGLW
Trigger: CCATAAACCTCCATAATGTCACCAAGTACTTGCGGT...CGAATGGGAATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCAGGAAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR TCA 90 bp ATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTATTAGAGTTAGACCATTaGGTTGGACAGATTTGGAAA +
Preference number: 2 (lower is better)
Translates to: MRKLASPVNFLAGEVFPLLELDH*VGQIWK
Trigger: TTTCCAAATCTGTCCAACTCAATGGTCTAACTCTAA...TAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR CCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTGACGTACTGAAGTGCTaGAGCCTGGCCTGTTTGAAC +
Preference number: 2 (lower is better)
Translates to: YPKGSNSGMENQILHVLTDVLKC*SLACLN
Trigger: GTTCAAACAGGCCAGGCTCCAGCACTTCAGTACGTC...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR CCA 90 bp TATATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATCCTTCTTTATACCTTaGATTGTCAGTGTTTGTGCA +
Preference number: 2 (lower is better)
Translates to: YMRKLASPVNFLAGEVFPSFFIP*IVSVCA
Trigger: TGCACAAACACTGACAATCCAAGGTATAAAGAAGGA...TGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR CCA 90 bp ATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTATACTTGGTGACATTATaGAGGTTTATGGCATACAGA +
Preference number: 2 (lower is better)
Translates to: MRKLASPVNFLAGEVFPLYLVTL*RFMAYR
Trigger: TCTGTATGCCATAAACCTCCATAATGTCACCAAGTA...TAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR CCA 90 bp CTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCACGTTAGACCATTGAGTTaGACAGATTTGGAAAGTAAT +
Preference number: 2 (lower is better)
Translates to: LITTSIPIRADRPNLSSHVRPLS*TDLESN
Trigger: ATTACTTTCCAAATCTGTCCAACTCAATGGTCTAAC...GTGGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR CAA 90 bp TCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCTCGTTGTaGTTGGCAGTGACTGGTGAAATGGCCACATTACCCATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: SIPKGYSETIIGTSL*LAVTGEMATLPISE
Trigger: TTCAGAAATGGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR TCA 90 bp GTGCTGGAGCCTGGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTGAATCTCCTCGCCTCTaGATTGTCATTAACCATTTT +
Preference number: 2 (lower is better)
Translates to: VLEPGLFERLVMWEYTFPESPRL*IVINHF
Trigger: AAAATGGTTAATGACAATTCAGAGGCGAGGAGATTC...AGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCCAGGCTCCAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR TCA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCAAGACATGAGGAGACATaGGGAGAGGTTTGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: VILREVTQEWKTKYCMFSRHEET*GEVCCE
Trigger: CTCACAGCAAACCTCTCCTCATGTCTCCTCATGTCT...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR TCA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCAGTTGGCAGTGACTGGTaGAATGGCCACATTACCCAT +
Preference number: 2 (lower is better)
Translates to: VILREVTQEWKTKYCMFSVGSDW*NGHITH
Trigger: ATGGGTAATGTGGCCATTTCACCAGTCACTGCCAAC...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR GCA 90 bp ATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATTACCCGCTTTGCAAGGTATCTaGTTCCTTTCCTATAACTTG +
Preference number: 2 (lower is better)
Translates to: IIGTSLLLAVTGEMATLPALQGI*FLSYNL
Trigger: CAAGTTATAGGAAAGGAAGCAGATACCTTGCAAAGC...GGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR GCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTATCAAAAATAAAACACTaGTGGGTGTGGTGGCTCACA +
Preference number: 2 (lower is better)
Translates to: DMRRHEERFAVRSSEKELSKIKH*WVWWLT
Trigger: TGTGAGCCACCACACCCAGCAGTGTTTTATTTTTGA...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CCA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCAAAAGACTGGTTGTGGTaGCTAATCGCTGTCCCCACA +
Preference number: 2 (lower is better)
Translates to: VILREVTQEWKTKYCMFSKDWLW*LIAVPT
Trigger: TGTGGGGACAGCGATTAGCCACCACAACCAGTCTTT...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTCCATGTTGGCCAGGCTaGTATCAAATTCCTCACGTC +
Preference number: 2 (lower is better)
Translates to: YPKGSNSGMENQILHVLTPCWPG*YQIPHV
Trigger: GACGTGAGGAATTTGATACCAGCCTGGCCAACATGG...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR CAA 90 bp ATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCTCGTTGTTGTaGGCAGTGACTGGTGAAATGGCCACATTACCCATTTCTGAACAA +
Preference number: 2 (lower is better)
Translates to: IPKGYSETIIGTSLL*AVTGEMATLPISEQ
Trigger: TTGTTCAGAAATGGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR CAA 90 bp GACTATTACTCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTaGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGA +
Preference number: 2 (lower is better)
Translates to: DYYSAIKKNNVFCSN*DGTGGCYPKGSNSG
Trigger: TCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGAGTAATAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR TCA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGCTGTGAGAAGCTCTaGAAAAGAGTTATTCAAGTC +
Preference number: 2 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGCCEKL*KRVIQV
Trigger: GACTTGAATAACTCTTTTTCAGAGCTTCTCACAGCA...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR GCA 90 bp GGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGGCTTTGCAAGGTATCTaGTTCCTTTCCTATAACTTG +
Preference number: 2 (lower is better)
Translates to: GAVILREVTQEWKTKYCMALQGI*FLSYNL
Trigger: CAAGTTATAGGAAAGGAAGCAGATACCTTGCAAAGC...CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR GCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTCAGCTACAGCCATCATaGTACCAGAGTCTGAGAATG +
Preference number: 2 (lower is better)
Translates to: YPKGSNSGMENQILHVLTQLQPS*YQSLRM
Trigger: CATTCTCAGACTCTGGTAGCATGATGGCTGTAGCTG...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR CCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATGTTAGACCATTGAGTTaGACAGATTTGGAAAGTAAT +
Preference number: 2 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDVRPLS*TDLESN
Trigger: ATTACTTTCCAAATCTGTCCAACTCAATGGTCTAAC...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR CCA 90 bp TTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATTGCAAGCAGCAACTTTaGCATTTCTTATCACAAAAA +
Preference number: 2 (lower is better)
Translates to: FLLFEPCTLAINTLVPTNCKQQL*HFLSQK
Trigger: TTTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCA...ATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR TCA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCGTGATGCCATGTAACTaGATCAATCACTTCTCCACC +
Preference number: 2 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCVMPCN*INHFST
Trigger: GGTGGAGAAGTGATTGATTCAGTTACATGGCATCAC...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR TCA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCTTGGAAAGTAATCCATaGGGTCCCAAAGGTCTTAGA +
Preference number: 2 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCLESNP*GPKGLR
Trigger: TCTAAGACCTTTGGGACCTCATGGATTACTTTCCAA...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR TCA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCTGCCCACCAATTTCTTaGACAGAAGAGATAGCCAAT +
Preference number: 2 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCCPPIS*TEEIAN
Trigger: ATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCA...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR GCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAACAAGCACCCACTAGTTaGTTTGCAAGGTATCTGCTT +
Preference number: 2 (lower is better)
Translates to: AVRSSEKELFKSMKETQKQAPTS*FARYLL
Trigger: AAGCAGATACCTTGCAAAGCAACTAGTGGGTGCTTG...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CCA 90 bp GTAGTTTCCTGCTCCAAAGAATACTTGCCTCATCACCACTTCTATTCCCATTCGCATTATGGAGGTTTATaGCATACAGAGTTAAATCTC +
Preference number: 2 (lower is better)
Translates to: VVSCSKEYLPHHHFYSHSHYGGL*HTELNL
Trigger: GAGATTTAACTCTGTATGCCATAAACCTCCATAATG...CGAATGGGAATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCAGGAAACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR TCA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACACATTACCCATTTCTaGACAATAAGACATGAGGAG +
Preference number: 2 (lower is better)
Translates to: VILREVTQEWKTKYCMFSHITHF*TIRHEE
Trigger: CTCCTCATGTCTTATTGTTCAGAAATGGGTAATGTG...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR TCA 90 bp TTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGGTGATGCCATGTAACTaGATCAATCACTTCTCCACC +
Preference number: 2 (lower is better)
Translates to: LWHTELNLLLYTLDCQCLVMPCN*INHFST
Trigger: GGTGGAGAAGTGATTGATTCAGTTACATGGCATCAC...CAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR GCA 90 bp TACTTGGTGACATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTACTTCTCTTTGAACCTTaGACGCTTGCCATTAACACC +
Preference number: 2 (lower is better)
Translates to: YLVTLWRFMAYRVKSPSLLLFEP*TLAINT
Trigger: GGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAG...TAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATGTCACCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR CCA 90 bp CTTTATACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTGCAAGCAGCAACTTTaGCATTTCTTATCACAAAAA +
Preference number: 2 (lower is better)
Translates to: LYTLDCQCLCNEGILEASCKQQL*HFLSQK
Trigger: TTTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCA...GGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGTATAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR CAA 90 bp AGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCGAAGCTTCCTTCTCTTaGAACCTTGCACGCTTGCCA +
Preference number: 3 (lower is better)
Translates to: SKGAPPPYAELVSPNQTFEASFS*NLARLP
Trigger: TGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTTC...GAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR CAA 90 bp TTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATCCTAACCAGACCTTCTaGCCAGGCCTGGTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: FLLFEPCTLAINTLVPTNPNQTF*PGLVLS
Trigger: TGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG...ATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR GCA 72 bp GGTTTGAAGGGGCCCATGAAACAGCTACAGCCATCATaGTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAG +
Preference number: 3 (lower is better)
Translates to: GLKGPMKQLQPS*YQSLRMKPALK
Trigger: CTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGTAGCTGTTTCATGGGCCCCTTCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR CAA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGTTTAGAAAATCTTCCTaGGTAGCAGTCCGTCCATTC +
Preference number: 3 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQFRKSS*VAVRPF
Trigger: GAATGGACGGACTGCTACCAAGGAAGATTTTCTAAA...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR TCA 72 bp TACTTGCCTCATCACCACTTCTATTCCCATTCGGGCTaGCAGGCCCAATTTATCCAGCCACATAAAGCCAGC +
Preference number: 3 (lower is better)
Translates to: YLPHHHFYSHSG*QAQFIQPHKAS
Trigger: GCTGGCTTTATGTGGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAGGCAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR GCA 72 bp CATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCTTaGCAGGCCTGGTGCTCTCAACCACCTGGAAAACTT +
Preference number: 3 (lower is better)
Translates to: HMQSLFLLTRPS*QAWCSQPPGKL
Trigger: AAGTTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR CCA 72 bp GGTACACAAGAACATACACAGTGGTATAAGGGATGTTaGAGACTCAGAAGGGAAGAGGGCGGAAGGAGGGTA +
Preference number: 3 (lower is better)
Translates to: GTQEHTQWYKGC*RLRREEGGRRV
Trigger: TACCCTCCTTCCGCCCTCTTCCCTTCTGAGTCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR CCA 72 bp AGCTTGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTaGTGCTCTCAACCACCTGGAAAACTTTTTGCACAG +
Preference number: 3 (lower is better)
Translates to: SLFLLTRPSCQA*CSQPPGKLFAQ
Trigger: CTGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR CAA 90 bp CCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGAAAACTTTTCTCCTTCTTTATACCTaGGATTGTCAGTGTTTGTGC +
Preference number: 3 (lower is better)
Translates to: PNQTFLPGLVLSTTWKTFLLLYT*DCQCLC
Trigger: GCACAAACACTGACAATCCAAGGTATAAAGAAGGAG...AAAAGTTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR-3UTR CAA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCGCTGAGGCAGGAGAATaGCTTAAAGTTGCAGTGAGC +
Preference number: 3 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGAEAGE*LKVAVS
Trigger: GCTCACTGCAACTTTAAGCAATTCTCCTGCCTCAGC...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CAA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAGGTGGGAGGATCAATaGAGTCCAGGAGTTCAGGAC +
Preference number: 3 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPRWEDQ*SPGVQD
Trigger: GTCCTGAACTCCTGGACTCAATTGATCCTCCCACCT...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CAA 90 bp CTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCCACCATCTGGTAACCGCAAGTACTaGGTGACATTATGGAGGTTT +
Preference number: 3 (lower is better)
Translates to: LAGEVFPLKVARFDHPPSGNRKY*VTLWRF
Trigger: AAACCTCCATAATGTCACCAAGTACTTGCGGTTACC...AGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR CAA 90 bp ATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTATTTAGAAAATCTTCCTaGGTAGCAGTCCGTCCATTC +
Preference number: 3 (lower is better)
Translates to: MRKLASPVNFLAGEVFPLFRKSS*VAVRPF
Trigger: GAATGGACGGACTGCTACCAAGGAAGATTTTCTAAA...TAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR TCA 72 bp ACAACCAGTTTCACGGTAACGGCAGTATGCTTTTTCTaGTGGGTGCCTGTAGAGATGGCACATGAAGGAAAG +
Preference number: 3 (lower is better)
Translates to: TTSFTVTAVCFF*WVPVEMAHEGK
Trigger: CTTTCCTTCATGTGCCATCTCTACAGGCACCCATCAGAAAAAGCATACTGCCGTTACCGTGAAACTGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CAA 90 bp AGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGTTGGATTGTCAGTGTTaGTGCAATGAAGGTATACTC +
Preference number: 3 (lower is better)
Translates to: RKLASPVNFLAGEVFPLKLDCQC*CNEGIL
Trigger: GAGTATACCTTCATTGCACAAACACTGACAATCCAA...CTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR CCA 72 bp GGAAGCTTAGCTGTAGGTACACAAGAACATACACAGTaGTATAAGGGATGTTGGAGACTCAGAAGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: GSLAVGTQEHTQ*YKGCWRLRREE
Trigger: CTCTTCCCTTCTGAGTCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR CAA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATTTGGATTGTCAGTGTTaGTGCAATGAAGGTATACTC +
Preference number: 3 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDLDCQC*CNEGIL
Trigger: GAGTATACCTTCATTGCACAAACACTGACAATCCAA...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR TCA 72 bp GGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTaGTCATCCACCATCTTTAGAGTTAGACCATTGAGT +
Preference number: 3 (lower is better)
Translates to: GRRGFSIKGGKV*SSTIFRVRPLS
Trigger: ACTCAATGGTCTAACTCTAAAGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR CAA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTATTAAATAAAGACTGGTaGTGGTGGCTAATCGCTGTC +
Preference number: 3 (lower is better)
Translates to: DMRRHEERFAVRSSEKELLNKDW*WWLIAV
Trigger: GACAGCGATTAGCCACCACAACCAGTCTTTATTTAA...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CAA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTGGGGTTTCACCATGTaGGCCAGGCTGGTATCAAAT +
Preference number: 3 (lower is better)
Translates to: YPKGSNSGMENQILHVLTWGFTM*ARLVSN
Trigger: ATTTGATACCAGCCTGGCCAACATGGTGAAACCCCA...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR-3UTR CAA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTCTTGCCATTAACACCTaGGTGCCCACCAATTTCTTG +
Preference number: 3 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACLAINT*VPTNFL
Trigger: CAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAG...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR GCA 72 bp TCTCTCAAGCACCCACTAGTTGCTTTGCAAGGTATCTaGTTCCTTTCCTATAACTTGAGTTGCTTTACTCTT +
Preference number: 3 (lower is better)
Translates to: SLKHPLVALQGI*FLSYNLSCFTL
Trigger: AAGAGTAAAGCAACTCAAGTTATAGGAAAGGAAGCAGATACCTTGCAAAGCAACTAGTGGGTGCTTGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR CCA 72 bp CTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATaGAAAACCAAATACTGCATGTTCTCACTTATAAGT +
Preference number: 3 (lower is better)
Translates to: LGAVILREVTQE*KTKYCMFSLIS
Trigger: ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR CAA 90 bp CTTTATACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCCTCCTTCTTTATACCTaGGATTGTCAGTGTTTGTGC +
Preference number: 3 (lower is better)
Translates to: LYTLDCQCLCNEGILEASLLLYT*DCQCLC
Trigger: GCACAAACACTGACAATCCAAGGTATAAAGAAGGAG...GGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGTATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR TCA 72 bp AGGTTTGATCATCCACCATCTTTAGAGTTAGACCATTaGGTTGGACAGATTTGGAAAGTAATCCATGAGGTC +
Preference number: 3 (lower is better)
Translates to: RFDHPPSLELDH*VGQIWKVIHEV
Trigger: GACCTCATGGATTACTTTCCAAATCTGTCCAACTCAATGGTCTAACTCTAAAGATGGTGGATGATCAAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR CAA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCATGCAAGCAGCAACTTaGGCATTTCTTATCACAAAA +
Preference number: 3 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCMQAAT*AFLITK
Trigger: TTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCAT...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR-3UTR CAA 90 bp ACATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATGCTCCAAAGAATACTaGCCTCATCACCACTTCTAT +
Preference number: 3 (lower is better)
Translates to: TLWRFMAYRVKSPSLYLGCSKEY*PHHHFY
Trigger: ATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCA...TCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR CCA 72 bp ATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTaGAAGCTTAGCTGTAGGTACACAAGAACATACACA +
Preference number: 3 (lower is better)
Translates to: MENQILHVLTYK*KLSCRYTRTYT
Trigger: TGTGTATGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR-3UTR CAA 90 bp ACATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTTAGAGTTAGACCATaGAGTTGGACAGATTTGGAA +
Preference number: 3 (lower is better)
Translates to: TLWRFMAYRVKSPSLYLGFRVRP*SWTDLE
Trigger: TTCCAAATCTGTCCAACTCAATGGTCTAACTCTAAA...TCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
3UTR CCA 72 bp CCATTTTTAATAACTTTAAATAAAGACTGGTTGTGGTaGCTAATCGCTGTCCCCACAGGTATTATAGTCTTT +
Preference number: 3 (lower is better)
Translates to: PFLITLNKDWLW*LIAVPTGIIVF
Trigger: AAAGACTATAATACCTGTGGGGACAGCGATTAGCCACCACAACCAGTCTTTATTTAAAGTTATTAAAAATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR GCA 72 bp ACCTTCTTAAAACTCATAATATATCCTTCGCTTCCTTaGTTCCTGACCATATTAGGAGCATTCATATACATT +
Preference number: 3 (lower is better)
Translates to: TFLKLIIYPSLP*FLTILGAFIYI
Trigger: AATGTATATGAATGCTCCTAATATGGTCAGGAAGCAAGGAAGCGAAGGATATATTATGAGTTTTAAGAAGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGGTCCACGACGTCCTGTaGTTGCGCAGGTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQVHDVL*LRRSGQ
Trigger: CTGCCCCGACCTGCGCAAGCACAGGACGTCGTGGAC...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR GCA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGGAGGGGCTCACCAGGTaGAGCGGCTCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQEGLTR*SGSWVK
Trigger: CTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTC...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR GCA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGACGACGTCCTGTGCTTaGGCAGGTCGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQTTSCA*AGRGRA
Trigger: CGCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGT...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GCCTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCGCAGCGGCTCCTGGGTaGAGAAGTCCAGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: ASSPLLFPFGLTGPIYPAAAAPG*RSPGPR
Trigger: TCGTGGACCTGGACTTCTTCACCCAGGAGCCGCTGC...GGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp CTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAGCAGCGGCTCCTGGGTaGAGAAGTCCAGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: LASPVNFLAGEVFPLKVAAAAPG*RSPGPR
Trigger: TCGTGGACCTGGACTTCTTCACCCAGGAGCCGCTGC...TGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp ATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAACGACGTCCTGTGCTTaGGCAGGTCGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: MRKLASPVNFLAGEVFPLTTSCA*AGRGRA
Trigger: CGCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGT...TAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp CTTGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGCACCCACTTGAAGGGTaGGGAGATGGCCGGGATCCA +
Preference number: 4 (lower is better)
Translates to: LVSPNQTFLPGLVLSTTWHPLEG*GDGRDP
Trigger: TGGATCCCGGCCATCTCCGCACCCTTCAAGTGGGTG...CCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR CAA 72 bp CGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTaGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RIARALRLHMQS*FLLTRPSCQAW
Trigger: CCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR GCA 90 bp CTGGTAAAAAGCGCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCACGACGTCCTGTGCTTaGGCAGGTCGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LVKSAELQCSVCRLTNTLTTSCA*AGRGRA
Trigger: CGCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGT...GAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGCGCTTTTTACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp CTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCCACCATCTACGACGTCCTGTGCTTaGGCAGGTCGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LAGEVFPLKVARFDHPPSTTSCA*AGRGRA
Trigger: CGCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGT...AGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATACGACGTCCTGTGCTTaGGCAGGTCGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDTTSCA*AGRGRA
Trigger: CGCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGT...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGGAACCGCGGGTCCGTaGCCAGGTTGGCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQGTAGP*PGWRQW
Trigger: CCATTGACGCCAACCTGGCCACGGACCCGCGGTTCC...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGGAACCGCGGGTCCGTaGCCAGGTTGGCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: TAIMLPESENEASAKDGRGTAGP*PGWRQW
Trigger: CCATTGACGCCAACCTGGCCACGGACCCGCGGTTCC...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp ATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAGGAACCGCGGGTCCGTaGCCAGGTTGGCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: MRKLASPVNFLAGEVFPLGTAGP*PGWRQW
Trigger: CCATTGACGCCAACCTGGCCACGGACCCGCGGTTCC...TAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTGGAACCGCGGGTCCGTaGCCAGGTTGGCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVGTAGP*PGWRQW
Trigger: CCATTGACGCCAACCTGGCCACGGACCCGCGGTTCC...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGGTTGGCGTCAATGGTaGCGGACAGGAACGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQGWRQW*RTGTRG
Trigger: GCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACC...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATGAGAACCCAGGAGGATaGGGAACCGCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: FLLFEPCTLAINTLVPTNENPGG*GTAGPW
Trigger: CCACGGACCCGCGGTTCCTCATCCTCCTGGGTTCTC...ATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR GCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACGTCCACGACGTCCTGTaGTTGCGCAGGTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENVHDVL*LRRSGQ
Trigger: CTGCCCCGACCTGCGCAAGCACAGGACGTCGTGGAC...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATGTCCACGACGTCCTGTaGTTGCGCAGGTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDVHDVL*LRRSGQ
Trigger: CTGCCCCGACCTGCGCAAGCACAGGACGTCGTGGAC...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp TTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATGAGGGGCTCACCAGGTaGAGCGGCTCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FLLFEPCTLAINTLVPTNEGLTR*SGSWVK
Trigger: CTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTC...ATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAGAGAACCCAGGAGGATaGGGAACCGCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETENPGG*GTAGPW
Trigger: CCACGGACCCGCGGTTCCTCATCCTCCTGGGTTCTC...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACAGAGAACCCAGGAGGATaGGGAACCGCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATENPGG*GTAGPW
Trigger: CCACGGACCCGCGGTTCCTCATCCTCCTGGGTTCTC...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATAGCTGGCAAGCCCAGTaGACTTCCTGGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FLLFEPCTLAINTLVPTNSWQAQ*TSWPER
Trigger: CCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCT...ATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp CTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCCACCATCTAGCTGGCAAGCCCAGTaGACTTCCTGGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LAGEVFPLKVARFDHPPSSWQAQ*TSWPER
Trigger: CCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCT...AGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGTCCCTGGTGACGTACTaGAGTGCTGGAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQSLVTY*SAGAWP
Trigger: AGGCCAGGCTCCAGCACTTCAGTACGTCACCAGGGA...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATTCACCCACACCCACTTaGAGGGTGCGGAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: FLLFEPCTLAINTLVPTNSPTPT*RVRRWP
Trigger: CGGCCATCTCCGCACCCTTCAAGTGGGTGTGGGTGA...ATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR GCA 90 bp ATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATTACCCGTCCACGACGTCCTGTaGTTGCGCAGGTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: IIGTSLLLAVTGEMATLPVHDVL*LRRSGQ
Trigger: CTGCCCCGACCTGCGCAAGCACAGGACGTCGTGGAC...GGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATGAGGGGCTCACCAGGTaGAGCGGCTCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHEGLTR*SGSWVK
Trigger: CTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTC...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp AGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCGGAAGTCTGTCTTGGTaGCACCAAACCTCAGGTACG +
Preference number: 4 (lower is better)
Translates to: SKGAPPPYAELVSPNQTFGSLSW*HQTSGT
Trigger: CGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCC...GAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp TTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATAGCGCAGCAGCATCTTaGGCTCACCTGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: FLLFEPCTLAINTLVPTNSAAAS*AHLAAP
Trigger: GGGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCT...ATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAAGGTGCAGCGGCTCCTaGGTGAAGAAGTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TAIMLPESENEASAKDGRRCSGS*VKKSRS
Trigger: GGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCT...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTAGGTGCAGCGGCTCCTaGGTGAAGAAGTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVRCSGS*VKKSRS
Trigger: GGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCT...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGCAGCGGCTCCTGGGTaGAGAAGTCCAGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSAAAPG*RSPGPR
Trigger: TCGTGGACCTGGACTTCTTCACCCAGGAGCCGCTGC...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACAGGTTGGCGTCAATGGTaGCGGACAGGAACGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATGWRQW*RTGTRG
Trigger: GCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACC...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTTGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGTATTCCCATTCGGGCTaGCAGGCCCAATTTATCCAG +
Preference number: 4 (lower is better)
Translates to: LVSPNQTFLPGLVLSTTWYSHSG*QAQFIQ
Trigger: CTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATA...CCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp GTGCTGGAGCCTGGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTAGCTGGCAAGCCCAGTaGACTTCCTGGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VLEPGLFERLVMWEYTFPSWQAQ*TSWPER
Trigger: CCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCT...AGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCCAGGCTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATAGCTGGCAAGCCCAGTaGACTTCCTGGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHSWQAQ*TSWPER
Trigger: CCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCT...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp GCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGCGGGTGGATCACTTaGGGACAGGAGTTCGAGGAC +
Preference number: 4 (lower is better)
Translates to: AELQCSVCRLTNTLSIPKGGWIT*GQEFED
Trigger: GTCCTCGAACTCCTGTCCTCAAGTGATCCACCCGCC...CTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp CTGGTAAAAAGCGCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCCTGGTGACGTACTaGAGTGCTGGAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LVKSAELQCSVCRLTNTLSLVTY*SAGAWP
Trigger: AGGCCAGGCTCCAGCACTTCAGTACGTCACCAGGGA...GAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGCGCTTTTTACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTAGAGGGGCTCACCAGGTaGAGCGGCTCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: DMRRHEERFAVRSSEKELEGLTR*SGSWVK
Trigger: CTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTC...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCGAGGGGCTCACCAGGTaGAGCGGCTCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGEGLTR*SGSWVK
Trigger: CTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTC...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp CTGCTGTACCATGCTGTACTCCCAAAGAAATCCCAGCACCTGGAAGGCCAAGGTCTAACCAGACCTTCTTaGCAGGCCTGGTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LLYHAVLPKKSQHLEGQGLTRPS*QAWCSQ
Trigger: TTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAG...ACCTTGGCCTTCCAGGTGCTGGGATTTCTTTGGGAGTACAGCATGGTACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp GTGCTGGAGCCTGGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTAGCGCAGCAGCATCTTaGGCTCACCTGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLEPGLFERLVMWEYTFPSAAAS*AHLAAP
Trigger: GGGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCT...AGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCCAGGCTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATAGGTGCAGCGGCTCCTaGGTGAAGAAGTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDRCSGS*VKKSRS
Trigger: GGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCT...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTCCTTCTTGCCAGGCCTaGTGCTCTCAACCACCTGGA +
Preference number: 4 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVPSCQA*CSQPPG
Trigger: TCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGG...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTAGCAGCGGCTCCTGGGTaGAGAAGTCCAGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: DMRRHEERFAVRSSEKELAAAPG*RSPGPR
Trigger: TCGTGGACCTGGACTTCTTCACCCAGGAGCCGCTGC...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGAAGCTTCCTTCTCTTTaGACCTTGCACGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQKLPSL*TLHACH
Trigger: ATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTT...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAAACCCAGATCCCTGGTaGCGTACTGAAGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TAIMLPESENEASAKDGRNPDPW*RTEVLE
Trigger: CTCCAGCACTTCAGTACGTCACCAGGGATCTGGGTT...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GTGCTGGAGCCTGGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTAGGTGCAGCGGCTCCTaGGTGAAGAAGTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VLEPGLFERLVMWEYTFPRCSGS*VKKSRS
Trigger: GGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCT...AGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCCAGGCTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GCTTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCACAGGAGACAAGCCTCTaGCCAAGGTACGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: ASFSLNLARLPLTPWCPPQETSL*PRYEAL
Trigger: CAAAGCTTCGTACCTTGGCCAGAGGCTTGTCTCCTG...TGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCCTTCTTGCCAGGCCTaGTGCTCTCAACCACCTGGA +
Preference number: 4 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDPSCQA*CSQPPG
Trigger: TCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGG...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTGGTTGGCGTCAATGGTaGCGGACAGGAACGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPGWRQW*RTGTRG
Trigger: GCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACC...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTTGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGGTGATGCCATGTAACTaGATCAATCACTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LVSPNQTFLPGLVLSTTWVMPCN*INHFST
Trigger: GGTGGAGAAGTGATTGATTCAGTTACATGGCATCAC...CCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGTATTCCCATTCGGGCTaGCAGGCCCAATTTATCCAG +
Preference number: 4 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQYSHSG*QAQFIQ
Trigger: CTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATA...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp AGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCACCGCAAGTACTTGGTaGCATTATGGAGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: SKGAPPPYAELVSPNQTFTASTW*HYGGLW
Trigger: CCATAAACCTCCATAATGTCACCAAGTACTTGCGGT...GAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTCCCTGGTGACGTACTaGAGTGCTGGAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGSLVTY*SAGAWP
Trigger: AGGCCAGGCTCCAGCACTTCAGTACGTCACCAGGGA...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGAACCCAGATCCCTGGTaGCGTACTGAAGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AELQCSVCRLTNTLSIPKNPDPW*RTEVLE
Trigger: CTCCAGCACTTCAGTACGTCACCAGGGATCTGGGTT...CTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATATCACCCACACCCACTTaGAGGGTGCGGAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIISPTPT*RVRRWP
Trigger: CGGCCATCTCCGCACCCTTCAAGTGGGTGTGGGTGA...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405413.6
CDS-3UTR TCA 90 bp ACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTTCACCCACACCCACTTaGAGGGTGCGGAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: TLDCQCLCNEGILEASFSSPTPT*RVRRWP
Trigger: CGGCCATCTCCGCACCCTTCAAGTGGGTGTGGGTGA...AGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGGAAGTCTGTCTTGGTaGCACCAAACCTCAGGTACG +
Preference number: 4 (lower is better)
Translates to: TAIMLPESENEASAKDGRGSLSW*HQTSGT
Trigger: CGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCC...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp TATATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCAGGAAGTCTGTCTTGGTaGCACCAAACCTCAGGTACG +
Preference number: 4 (lower is better)
Translates to: YMRKLASPVNFLAGEVFPGSLSW*HQTSGT
Trigger: CGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCC...TGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp ACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTAGCGCAGCAGCATCTTaGGCTCACCTGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TLDCQCLCNEGILEASFSSAAAS*AHLAAP
Trigger: GGGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCT...AGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp CTGCTGTACCATGCTGTACTCCCAAAGAAATCCCAGCACCTGGAAGGCCAAGGTGGGGTTTCACCATGTTaGCCAGGCTGGTATCAAATT +
Preference number: 4 (lower is better)
Translates to: LLYHAVLPKKSQHLEGQGGVSPC*PGWYQI
Trigger: AATTTGATACCAGCCTGGCCAACATGGTGAAACCCC...ACCTTGGCCTTCCAGGTGCTGGGATTTCTTTGGGAGTACAGCATGGTACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAAGCCTCCCAAGTAGCTaGGACTACAGGACCACACCC +
Preference number: 4 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSSLPSS*DYRTTP
Trigger: GGGTGTGGTCCTGTAGTCCCAGCTACTTGGGAGGCT...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR CAA 72 bp CCATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCTaGCCAGGCCTGGTGCTCTCAACCACCTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: PYAELVSPNQTF*PGLVLSTTWKT
Trigger: AGTTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp CTTTATACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCGGTTGGCGTCAATGGTaGCGGACAGGAACGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LYTLDCQCLCNEGILEASGWRQW*RTGTRG
Trigger: GCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACC...GGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGTATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CTGCTGTACCATGCTGTACTCCCAAAGAAATCCCAGCACCTGGAAGGCCAAGGTGTGATGCCATGTAACTaGATCAATCACTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LLYHAVLPKKSQHLEGQGVMPCN*INHFST
Trigger: GGTGGAGAAGTGATTGATTCAGTTACATGGCATCAC...ACCTTGGCCTTCCAGGTGCTGGGATTTCTTTGGGAGTACAGCATGGTACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGAAAGGTGGCAAGGTTTaGTCATCCACCATCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQKGGKV*SSTIFR
Trigger: TCTAAAGATGGTGGATGATCAAACCTTGCCACCTTT...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp GGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGATTCCTCACGTCAGGTaGTCCATCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GAVILREVTQEWKTKYCMIPHVR*SICLGL
Trigger: GAGGCCGAGGCAGATGGATCACCTGACGTGAGGAAT...CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACGGAGCCTGGCCTGTTTaGACGTCTAGTTATGTGGGA +
Preference number: 4 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENGAWPV*TSSYVG
Trigger: TCCCACATAACTAGACGTTCAAACAGGCCAGGCTCC...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGAGACATGAGGAGACATaGGGAGAGGTTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQRHEET*GEVCCE
Trigger: CTCACAGCAAACCTCTCCTCATGTCTCCTCATGTCT...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGTTGGCAGTGACTGGTaGAATGGCCACATTACCCAT +
Preference number: 4 (lower is better)
Translates to: TAIMLPESENEASAKDGRVGSDW*NGHITH
Trigger: ATGGGTAATGTGGCCATTTCACCAGTCACTGCCAAC...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTGTCCACGACGTCCTGTaGTTGCGCAGGTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACVHDVL*LRRSGQ
Trigger: CTGCCCCGACCTGCGCAAGCACAGGACGTCGTGGAC...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACAGTCCACGACGTCCTGTaGTTGCGCAGGTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTVHDVL*LRRSGQ
Trigger: CTGCCCCGACCTGCGCAAGCACAGGACGTCGTGGAC...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACGGAAGTCTGTCTTGGTaGCACCAAACCTCAGGTACG +
Preference number: 4 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENGSLSW*HQTSGT
Trigger: CGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCC...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTGGAACCGCGGGTCCGTaGCCAGGTTGGCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: YPKGSNSGMENQILHVLTGTAGP*PGWRQW
Trigger: CCATTGACGCCAACCTGGCCACGGACCCGCGGTTCC...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp ATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTACAAGGTACGAAGCTTTaGAGAACCCAGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: MRKLASPVNFLAGEVFPLQGTKL*RTQEDE
Trigger: CTCATCCTCCTGGGTTCTCCAAAGCTTCGTACCTTG...TAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp CTGGTAAAAAGCGCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCGACGTACTGAAGTGCTaGAGCCTGGCCTGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: LVKSAELQCSVCRLTNTLDVLKC*SLACLN
Trigger: GTTCAAACAGGCCAGGCTCCAGCACTTCAGTACGTC...GAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGCGCTTTTTACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACGACGTACTGAAGTGCTaGAGCCTGGCCTGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENDVLKC*SLACLN
Trigger: GTTCAAACAGGCCAGGCTCCAGCACTTCAGTACGTC...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTGCAGCGGCTCCTGGGTaGAGAAGTCCAGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACAAAPG*RSPGPR
Trigger: TCGTGGACCTGGACTTCTTCACCCAGGAGCCGCTGC...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAGAGAACCCAGGAGGATaGGGAACCGCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKENPGG*GTAGPW
Trigger: CCACGGACCCGCGGTTCCTCATCCTCCTGGGTTCTC...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GCCTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCTCTCTCTTCAAAGGTTaGTTCCTTCTTGGGATCGAA +
Preference number: 4 (lower is better)
Translates to: ASSPLLFPFGLTGPIYPASLFKG*FLLGIE
Trigger: TTCGATCCCAAGAAGGAATCAACCTTTGAAGAGAGA...GGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGAGTAGGTGCTGTTCTTaGACTTTTTCTGGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQSRCCS*TFSGSV
Trigger: AACACTACCAGAAAAAGTTCAAGAACAGCACCTACT...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp CCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGAAAACTTTTGATCAAGTCCAGTCCTaGGCAGTTTGCAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: PNQTFLPGLVLSTTWKTFDQVQS*AVCKSV
Trigger: TACACTTTTGCAAACTGCTCAGGACTGGACTTGATC...AAAAGTTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507150.5
CDS-3UTR TCA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTTCACCCACACCCACTTaGAGGGTGCGGAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACSPTPT*RVRRWP
Trigger: CGGCCATCTCCGCACCCTTCAAGTGGGTGTGGGTGA...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAGAGGGGCTCACCAGGTaGAGCGGCTCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKEGLTR*SGSWVK
Trigger: CTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTC...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACAGGAAGTCTGTCTTGGTaGCACCAAACCTCAGGTACG +
Preference number: 4 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETGSLSW*HQTSGT
Trigger: CGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCC...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCGCTCCAAAGAATACTTaGCTCATCACCACTTCTATT +
Preference number: 4 (lower is better)
Translates to: SKGAPPPYAELVSPNQTFAPKNT*LITTSI
Trigger: AATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGC...GAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR GCA 90 bp GCTTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCACTTCTCTTTGAACCTTaGACGCTTGCCATTAACACC +
Preference number: 4 (lower is better)
Translates to: ASFSLNLARLPLTPWCPPLLFEP*TLAINT
Trigger: GGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAG...TGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACACAGGAGACAAGCCTCTaGCCAAGGTACGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATQETSL*PRYEAL
Trigger: CAAAGCTTCGTACCTTGGCCAGAGGCTTGTCTCCTG...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCACAGGAGACAAGCCTCTaGCCAAGGTACGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSQETSL*PRYEAL
Trigger: CAAAGCTTCGTACCTTGGCCAGAGGCTTGTCTCCTG...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGTTAGGAAGTCTGTCTTaGTGCCACCAAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQLGSLS*CHQTSG
Trigger: ACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAA...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATACCTTCTTGCCAGGCCTaGTGCTCTCAACCACCTGGA +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIIPSCQA*CSQPPG
Trigger: TCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGG...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGAATATAGAAAGTAGCTaGGCGTGGTGGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: AELQCSVCRLTNTLSIPKNIESS*AWWHTP
Trigger: AGGCGTGTGCCACCACGCCCAGCTACTTTCTATATT...CTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACAAAGACTGGTTGTGGTaGCTAATCGCTGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENKDWLW*LIAVPT
Trigger: TGTGGGGACAGCGATTAGCCACCACAACCAGTCTTT...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGGGGTTTCACCATGTTaGCCAGGCTGGTATCAAATT +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQGVSPC*PGWYQI
Trigger: AATTTGATACCAGCCTGGCCAACATGGTGAAACCCC...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp ATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGGGTTGGCGTCAATGGTaGCGGACAGGAACGAGGGGC +
Preference number: 4 (lower is better)
Translates to: MAYRVKSPSLYLGLSVFVGWRQW*RTGTRG
Trigger: GCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACC...CACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAATGAGAACCCAGGAGGATaGGGAACCGCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: HTELNLLLYTLDCQCLCNENPGG*GTAGPW
Trigger: CCACGGACCCGCGGTTCCTCATCCTCCTGGGTTCTC...ATTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp TTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGGAGAACCCAGGAGGATaGGGAACCGCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LWHTELNLLLYTLDCQCLENPGG*GTAGPW
Trigger: CCACGGACCCGCGGTTCCTCATCCTCCTGGGTTCTC...CAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CTGCTGTACCATGCTGTACTCCCAAAGAAATCCCAGCACCTGGAAGGCCAAGGTAGTAGGTGCTGTTCTTaGACTTTTTCTGGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLYHAVLPKKSQHLEGQGSRCCS*TFSGSV
Trigger: AACACTACCAGAAAAAGTTCAAGAACAGCACCTACT...ACCTTGGCCTTCCAGGTGCTGGGATTTCTTTGGGAGTACAGCATGGTACAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATATTCCCATTCGGGCTaGCAGGCCCAATTTATCCAG +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATYSHSG*QAQFIQ
Trigger: CTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATA...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCTATTCCCATTCGGGCTaGCAGGCCCAATTTATCCAG +
Preference number: 4 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTYSHSG*QAQFIQ
Trigger: CTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATA...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GCTTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCATGCCCACCAATTTCTTaGACAGAAGAGATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: ASFSLNLARLPLTPWCPPCPPIS*TEEIAN
Trigger: ATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCA...TGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTACCGCAAGTACTTGGTaGCATTATGGAGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVTASTW*HYGGLW
Trigger: CCATAAACCTCCATAATGTCACCAAGTACTTGCGGT...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGACCGCAAGTACTTGGTaGCATTATGGAGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQTASTW*HYGGLW
Trigger: CCATAAACCTCCATAATGTCACCAAGTACTTGCGGT...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAAGCTGGCAAGCCCAGTaGACTTCCTGGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKSWQAQ*TSWPER
Trigger: CCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCT...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGTTAAAAGGCTGCAGTaGTCTATGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQVKRLQ*SMIAPL
Trigger: CAGTGGTGCAATCATAGATCACTGCAGCCTTTTAAC...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACGCAGTATGCTTTTTCTaGTGGGTGCCTGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENAVCFF*WVPVEM
Trigger: CATCTCTACAGGCACCCATCAGAAAAAGCATACTGC...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp CTGGTAAAAAGCGCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCGCAGTATGCTTTTTCTaGTGGGTGCCTGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: LVKSAELQCSVCRLTNTLAVCFF*WVPVEM
Trigger: CATCTCTACAGGCACCCATCAGAAAAAGCATACTGC...GAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGCGCTTTTTACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAAGGAGAGGTTTGCTGTaGGAAGCTCTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: TAIMLPESENEASAKDGRRRGLL*EALKKS
Trigger: ACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCT...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCAGACATGAGGAGACATaGGGAGAGGTTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTRHEET*GEVCCE
Trigger: CTCACAGCAAACCTCTCCTCATGTCTCCTCATGTCT...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGACTGAACAATAAGACATaGGGAGACATGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: TAIMLPESENEASAKDGRLNNKT*GDMRRG
Trigger: ACCTCTCCTCATGTCTCCTCATGTCTTATTGTTCAG...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp GTAGTTTCCTGCTCCAAAGAATACTTGCCTCATCACCACTTCTATTCCCATTCGGGAAGTCTGTCTTGGTaGCACCAAACCTCAGGTACG +
Preference number: 4 (lower is better)
Translates to: VVSCSKEYLPHHHFYSHSGSLSW*HQTSGT
Trigger: CGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCC...CGAATGGGAATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCAGGAAACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR GCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGCTTCTCTTTGAACCTTaGACGCTTGCCATTAACACC +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQLLFEP*TLAINT
Trigger: GGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAG...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGACAAGCACCCACTAGTTaGTTTGCAAGGTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: TAIMLPESENEASAKDGRQAPTS*FARYLL
Trigger: AAGCAGATACCTTGCAAAGCAACTAGTGGGTGCTTG...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACACACCCACTTGAAGGGTaGGGAGATGGCCGGGATCCA +
Preference number: 4 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTHPLEG*GDGRDP
Trigger: TGGATCCCGGCCATCTCCGCACCCTTCAAGTGGGTG...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405413.6
CDS-3UTR CCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAAGCGCAGCAGCATCTTaGGCTCACCTGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKSAAAS*AHLAAP
Trigger: GGGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCT...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp ATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGAGCGCAGCAGCATCTTaGGCTCACCTGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: MAYRVKSPSLYLGLSVFVSAAAS*AHLAAP
Trigger: GGGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCT...CACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATGGAACCGCGGGTCCGTaGCCAGGTTGGCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDGTAGP*PGWRQW
Trigger: CCATTGACGCCAACCTGGCCACGGACCCGCGGTTCC...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACACAAGGTACGAAGCTTTaGAGAACCCAGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATQGTKL*RTQEDE
Trigger: CTCATCCTCCTGGGTTCTCCAAAGCTTCGTACCTTG...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCAAGGTACGAAGCTTTaGAGAACCCAGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHQGTKL*RTQEDE
Trigger: CTCATCCTCCTGGGTTCTCCAAAGCTTCGTACCTTG...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp CTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCCACCATCTTTAGGAAGTCTGTCTTaGTGCCACCAAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LAGEVFPLKVARFDHPPSLGSLS*CHQTSG
Trigger: ACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAA...AGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp CCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGAAAACTTTTGTGCTCTCAACCACCTaGAAAACTTTTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: PNQTFLPGLVLSTTWKTFVLSTT*KTFCTD
Trigger: ATCTGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCAC...AAAAGTTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGTACTTGGTGACATTATaGAGGTTTATGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQYLVTL*RFMAYR
Trigger: TCTGTATGCCATAAACCTCCATAATGTCACCAAGTA...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp GTGCTGGAGCCTGGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTAATATAGAAAGTAGCTaGGCGTGGTGGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: VLEPGLFERLVMWEYTFPNIESS*AWWHTP
Trigger: AGGCGTGTGCCACCACGCCCAGCTACTTTCTATATT...AGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCCAGGCTCCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTAGTGGTCCTAGCTACTTaGGAGGCTAAGCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: DMRRHEERFAVRSSEKELVVLAT*EAKQED
Trigger: ATCCTCCTGCTTAGCCTCCCAAGTAGCTAGGACCAC...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp ATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATTACCCAAAGACTGGTTGTGGTaGCTAATCGCTGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: IIGTSLLLAVTGEMATLPKDWLW*LIAVPT
Trigger: TGTGGGGACAGCGATTAGCCACCACAACCAGTCTTT...GGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp ATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATTACCCCCATGTTGGCCAGGCTaGTATCAAATTCCTCACGTC +
Preference number: 4 (lower is better)
Translates to: IIGTSLLLAVTGEMATLPPCWPG*YQIPHV
Trigger: GACGTGAGGAATTTGATACCAGCCTGGCCAACATGG...GGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATGGTTGGCGTCAATGGTaGCGGACAGGAACGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDGWRQW*RTGTRG
Trigger: GCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACC...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGCAAATATCCTGGTTaGCTTGAGATTGCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVCKYPG*LEIASN
Trigger: GTTACTGGCAATCTCAAGTCAACCAGGATATTTGCA...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp AGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGTGCAAATATCCTGGTTaGCTTGAGATTGCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: RKLASPVNFLAGEVFPLKCKYPG*LEIASN
Trigger: GTTACTGGCAATCTCAAGTCAACCAGGATATTTGCA...CTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATGATCAAGTCCAGTCCTaGGCAGTTTGCAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDDQVQS*AVCKSV
Trigger: TACACTTTTGCAAACTGCTCAGGACTGGACTTGATC...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATGTGATGCCATGTAACTaGATCAATCACTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDVMPCN*INHFST
Trigger: GGTGGAGAAGTGATTGATTCAGTTACATGGCATCAC...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACAAAGCTTCCTTCTCTTTaGACCTTGCACGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATKLPSL*TLHACH
Trigger: ATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTT...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp AGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGTTGGAAAGTAATCCATaGGGTCCCAAAGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RKLASPVNFLAGEVFPLKLESNP*GPKGLR
Trigger: TCTAAGACCTTTGGGACCTCATGGATTACTTTCCAA...CTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAGGCGGGTGGATCACTTaGGGACAGGAGTTCGAGGAC +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKGGWIT*GQEFED
Trigger: GTCCTCGAACTCCTGTCCTCAAGTGATCCACCCGCC...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp AGCTTAGCTGTAGGTACACAAGAACATACACAGTGGTATAAGGGATGTTGGAGAGGAGCCTGGCCTGTTTaGACGTCTAGTTATGTGGGA +
Preference number: 4 (lower is better)
Translates to: SLAVGTQEHTQWYKGCWRGAWPV*TSSYVG
Trigger: TCCCACATAACTAGACGTTCAAACAGGCCAGGCTCC...TCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGAGGAGAGGTTTGCTGTaGGAAGCTCTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: AELQCSVCRLTNTLSIPKRRGLL*EALKKS
Trigger: ACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCT...CTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGCACATTACCCATTTCTaGACAATAAGACATGAGGAG +
Preference number: 4 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQHITHF*TIRHEE
Trigger: CTCCTCATGTCTTATTGTTCAGAAATGGGTAATGTG...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGGTTGGCAGTGACTGGTaGAATGGCCACATTACCCAT +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILVGSDW*NGHITH
Trigger: ATGGGTAATGTGGCCATTTCACCAGTCACTGCCAAC...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AGCTTAGCTGTAGGTACACAAGAACATACACAGTGGTATAAGGGATGTTGGAGATCTTGCCAGGCCTGGTaGTCTCAACCACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLAVGTQEHTQWYKGCWRSCQAW*SQPPGK
Trigger: TTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGA...TCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCTTCTCTTTGAACCTTaGACGCTTGCCATTAACACC +
Preference number: 4 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDLLFEP*TLAINT
Trigger: GGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAG...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp GCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAACACCCACTTGAAGGGTaGGGAGATGGCCGGGATCCA +
Preference number: 4 (lower is better)
Translates to: AYRVKSPSLYLGLSVFVQHPLEG*GDGRDP
Trigger: TGGATCCCGGCCATCTCCGCACCCTTCAAGTGGGTG...TTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp ATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCACCCACTTGAAGGGTaGGGAGATGGCCGGGATCCA +
Preference number: 4 (lower is better)
Translates to: MAYRVKSPSLYLGLSVFVHPLEG*GDGRDP
Trigger: TGGATCCCGGCCATCTCCGCACCCTTCAAGTGGGTG...CACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp ATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGAGGTGCAGCGGCTCCTaGGTGAAGAAGTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: MAYRVKSPSLYLGLSVFVRCSGS*VKKSRS
Trigger: GGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCT...CACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGGTGCAGCGGCTCCTaGGTGAAGAAGTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LREVTQEWKTKYCMFSLIRCSGS*VKKSRS
Trigger: GGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCT...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTACAAGGTACGAAGCTTTaGAGAACCCAGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: DMRRHEERFAVRSSEKELQGTKL*RTQEDE
Trigger: CTCATCCTCCTGGGTTCTCCAAAGCTTCGTACCTTG...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATACAGGAGACAAGCCTCTaGCCAAGGTACGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIIQETSL*PRYEAL
Trigger: CAAAGCTTCGTACCTTGGCCAGAGGCTTGTCTCCTG...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp AGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGAAATGTTATACCCCTTaGAAGAGCAGTAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RKLASPVNFLAGEVFPLKKCYTP*KSSSPG
Trigger: TCCTGGACTACTGCTCTTCCAAGGGGTATAACATTT...CTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000509906.5
CDS-3UTR CCA 90 bp AGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGCTCTCAACCACCTaGAAAACTTTTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: RKLASPVNFLAGEVFPLKVLSTT*KTFCTD
Trigger: ATCTGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCAC...CTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACACCTTCTTGCCAGGCCTaGTGCTCTCAACCACCTGGA +
Preference number: 4 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTPSCQA*CSQPPG
Trigger: TCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGG...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GCCTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCTCCTTCTTTATACCTTaGATTGTCAGTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ASSPLLFPFGLTGPIYPASFFIP*IVSVCA
Trigger: TGCACAAACACTGACAATCCAAGGTATAAAGAAGGA...GGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGTGCAAGCAGCAACTTTaGCATTTCTTATCACAAAAA +
Preference number: 4 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQCKQQL*HFLSQK
Trigger: TTTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCA...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTAGCCTCCCAAGTAGCTaGGACTACAGGACCACACCC +
Preference number: 4 (lower is better)
Translates to: YPKGSNSGMENQILHVLTSLPSS*DYRTTP
Trigger: GGGTGTGGTCCTGTAGTCCCAGCTACTTGGGAGGCT...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp AGCTTAGCTGTAGGTACACAAGAACATACACAGTGGTATAAGGGATGTTGGAGAGACGTACTGAAGTGCTaGAGCCTGGCCTGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: SLAVGTQEHTQWYKGCWRDVLKC*SLACLN
Trigger: GTTCAAACAGGCCAGGCTCCAGCACTTCAGTACGTC...TCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATTGCAAATATCCTGGTTaGCTTGAGATTGCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: FLLFEPCTLAINTLVPTNCKYPG*LEIASN
Trigger: GTTACTGGCAATCTCAAGTCAACCAGGATATTTGCA...ATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACAGATCAAGTCCAGTCCTaGGCAGTTTGCAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETDQVQS*AVCKSV
Trigger: TACACTTTTGCAAACTGCTCAGGACTGGACTTGATC...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCGTGATGCCATGTAACTaGATCAATCACTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTVMPCN*INHFST
Trigger: GGTGGAGAAGTGATTGATTCAGTTACATGGCATCAC...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAGTGATGCCATGTAACTaGATCAATCACTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETVMPCN*INHFST
Trigger: GGTGGAGAAGTGATTGATTCAGTTACATGGCATCAC...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCCACCATCTTGCCCACCAATTTCTTaGACAGAAGAGATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LAGEVFPLKVARFDHPPSCPPIS*TEEIAN
Trigger: ATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCA...AGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGAAGCTTCCTTCTCTTTaGACCTTGCACGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILKLPSL*TLHACH
Trigger: ATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTT...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACAACCGCAAGTACTTGGTaGCATTATGGAGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETTASTW*HYGGLW
Trigger: CCATAAACCTCCATAATGTCACCAAGTACTTGCGGT...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp AGAATACTTGCCTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTTGGAAAGTAATCCATaGGGTCCCAAAGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RILASSPLLFPFGLTGPILESNP*GPKGLR
Trigger: TCTAAGACCTTTGGGACCTCATGGATTACTTTCCAA...AATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAGGCAAGTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp GCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGTTGGAAAGTAATCCATaGGGTCCCAAAGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: AELQCSVCRLTNTLSIPKLESNP*GPKGLR
Trigger: TCTAAGACCTTTGGGACCTCATGGATTACTTTCCAA...CTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCGTTAAAAGGCTGCAGTaGTCTATGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTVKRLQ*SMIAPL
Trigger: CAGTGGTGCAATCATAGATCACTGCAGCCTTTTAAC...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAATTCCTCACGTCAGGTaGTCCATCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKIPHVR*SICLGL
Trigger: GAGGCCGAGGCAGATGGATCACCTGACGTGAGGAAT...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATCTCCTCGCCTCTaGATTGTCATTAACCATTTT +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQESPRL*IVINHF
Trigger: AAAATGGTTAATGACAATTCAGAGGCGAGGAGATTC...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCTCCAAAGAATACTTaGCTCATCACCACTTCTATT +
Preference number: 4 (lower is better)
Translates to: TAIMLPESENEASAKDGRAPKNT*LITTSI
Trigger: AATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGC...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACACTTCTCTTTGAACCTTaGACGCTTGCCATTAACACC +
Preference number: 4 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETLLFEP*TLAINT
Trigger: GGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAG...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp GTGCTGGAGCCTGGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTCTCCTGCTGTACCATaGTGTACTCCCAAAGAAATC +
Preference number: 4 (lower is better)
Translates to: VLEPGLFERLVMWEYTFPSPAVP*CTPKEI
Trigger: GATTTCTTTGGGAGTACAGCATGGTACAGCAGGAGA...AGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCCAGGCTCCAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCAGCTACAGCCATCATaGTACCAGAGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILQLQPS*YQSLRM
Trigger: CATTCTCAGACTCTGGTAGCATGATGGCTGTAGCTG...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATGCCTTCAGGAAGCATTaGCTAGTTCCCAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHAFRKH*LVPKKC
Trigger: ACATTTCTTGGGAACTAGGCAATGCTTCCTGAAGGC...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507150.5
CDS-3UTR CCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTATTAGGAAGTCTGTCTTaGTGCCACCAAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DMRRHEERFAVRSSEKELLGSLS*CHQTSG
Trigger: ACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAA...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGAGGTTGATTCCTTCTTaGGATCGAAAATTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQRLIPS*DRKLGS
Trigger: ACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCT...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACAAATGTTATACCCCTTaGAAGAGCAGTAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENKCYTP*KSSSPG
Trigger: TCCTGGACTACTGCTCTTCCAAGGGGTATAACATTT...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp AGAATACTTGCCTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTAAATGTTATACCCCTTaGAAGAGCAGTAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RILASSPLLFPFGLTGPIKCYTP*KSSSPG
Trigger: TCCTGGACTACTGCTCTTCCAAGGGGTATAACATTT...AATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAGGCAAGTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507150.5
CDS-3UTR CCA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTCCTTCTTGCCAGGCCTaGTGCTCTCAACCACCTGGA +
Preference number: 4 (lower is better)
Translates to: REVTQEWKTKYCMFSLISPSCQA*CSQPPG
Trigger: TCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGG...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp CTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCACTACTTGGTGACATTATaGAGGTTTATGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: LITTSIPIRADRPNLSSHYLVTL*RFMAYR
Trigger: TCTGTATGCCATAAACCTCCATAATGTCACCAAGTA...GTGGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGAATAAAGACTGGTTGTaGTGGCTAATCGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILNKDWL*WLIAVP
Trigger: GGGGACAGCGATTAGCCACCACAACCAGTCTTTATT...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR CAA 72 bp AAGGGTTACTCAGAGACAATTATAGGAACCTCGTTGTaGTTGGCAGTGACTGGTGAAATGGCCACATTACCC +
Preference number: 4 (lower is better)
Translates to: KGYSETIIGTSL*LAVTGEMATLP
Trigger: GGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTCTGAGTAACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCTCTCTCTTCAAAGGTTaGTTCCTTCTTGGGATCGAA +
Preference number: 4 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTSLFKG*FLLGIE
Trigger: TTCGATCCCAAGAAGGAATCAACCTTTGAAGAGAGA...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACATCTCTCTTCAAAGGTTaGTTCCTTCTTGGGATCGAA +
Preference number: 4 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETSLFKG*FLLGIE
Trigger: TTCGATCCCAAGAAGGAATCAACCTTTGAAGAGAGA...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATTACCCTGCAAATATCCTGGTTaGCTTGAGATTGCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: IIGTSLLLAVTGEMATLPCKYPG*LEIASN
Trigger: GTTACTGGCAATCTCAAGTCAACCAGGATATTTGCA...GGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATGCAAATATCCTGGTTaGCTTGAGATTGCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATCKYPG*LEIASN
Trigger: GTTACTGGCAATCTCAAGTCAACCAGGATATTTGCA...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACATGCCCACCAATTTCTTaGACAGAAGAGATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETCPPIS*TEEIAN
Trigger: ATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCA...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GTGCTGGAGCCTGGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTCAGTGTTTGTGCAATaGAGGTATACTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLEPGLFERLVMWEYTFPSVFVQ*RYTRSF
Trigger: GAAGCTTCGAGTATACCTTCATTGCACAAACACTGA...AGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCCAGGCTCCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGAGAGGTAACATCAAATaGTCTCCTGCTGTACCATGC +
Preference number: 4 (lower is better)
Translates to: GAVILREVTQEWKTKYCMRGNIK*SPAVPC
Trigger: GCATGGTACAGCAGGAGATCATTTGATGTTACCTCT...CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAAACCCAGATCCCTGGTaGCGTACTGAAGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKNPDPW*RTEVLE
Trigger: CTCCAGCACTTCAGTACGTCACCAGGGATCTGGGTT...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACTGCTGTGAGAAGCTCTaGAAAAGAGTTATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENCCEKL*KRVIQV
Trigger: GACTTGAATAACTCTTTTTCAGAGCTTCTCACAGCA...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCTGAACAATAAGACATaGGGAGACATGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILLNNKT*GDMRRG
Trigger: ACCTCTCCTCATGTCTCCTCATGTCTTATTGTTCAG...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTCTTGCCAGGCCTGGTaGTCTCAACCACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: YPKGSNSGMENQILHVLTSCQAW*SQPPGK
Trigger: TTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGA...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTAACCAGACCTTCTTaGCAGGCCTGGTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: VILREVTQEWKTKYCMFSLTRPS*QAWCSQ
Trigger: TTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAG...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTACTTCTCTTTGAACCTTaGACGCTTGCCATTAACACC +
Preference number: 4 (lower is better)
Translates to: DMRRHEERFAVRSSEKELLLFEP*TLAINT
Trigger: GGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAG...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACATCAAAAATAAAACACTaGTGGGTGTGGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETSKIKH*WVWWLT
Trigger: TGTGAGCCACCACACCCAGCAGTGTTTTATTTTTGA...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTCAGGAGACAAGCCTCTaGCCAAGGTACGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACQETSL*PRYEAL
Trigger: CAAAGCTTCGTACCTTGGCCAGAGGCTTGTCTCCTG...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACAAAATGTTATACCCCTTaGAAGAGCAGTAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETKCYTP*KSSSPG
Trigger: TCCTGGACTACTGCTCTTCCAAGGGGTATAACATTT...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACAGTGCTCTCAACCACCTaGAAAACTTTTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATVLSTT*KTFCTD
Trigger: ATCTGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCAC...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp CCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGAAAACTTTTCATTATGGAGGTTTATaGCATACAGAGTTAAATCTC +
Preference number: 4 (lower is better)
Translates to: PNQTFLPGLVLSTTWKTFHYGGL*HTELNL
Trigger: GAGATTTAACTCTGTATGCCATAAACCTCCATAATG...AAAAGTTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
3UTR CAA 72 bp GGTTACTCAGAGACAATTATAGGAACCTCGTTGTTGTaGGCAGTGACTGGTGAAATGGCCACATTACCCATT +
Preference number: 4 (lower is better)
Translates to: GYSETIIGTSLL*AVTGEMATLPI
Trigger: AATGGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTCTGAGTAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
3UTR CAA 72 bp CCAAAGGGTTACTCAGAGACAATTATAGGAACCTCGTaGTTGTTGGCAGTGACTGGTGAAATGGCCACATTA +
Preference number: 4 (lower is better)
Translates to: PKGYSETIIGTS*LLAVTGEMATL
Trigger: TAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTCTGAGTAACCCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACAAGTAGGTGCTGTTCTTaGACTTTTTCTGGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATSRCCS*TFSGSV
Trigger: AACACTACCAGAAAAAGTTCAAGAACAGCACCTACT...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACAAGTAGGTGCTGTTCTTaGACTTTTTCTGGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETSRCCS*TFSGSV
Trigger: AACACTACCAGAAAAAGTTCAAGAACAGCACCTACT...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGATCAAGTCCAGTCCTaGGCAGTTTGCAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIIDQVQS*AVCKSV
Trigger: TACACTTTTGCAAACTGCTCAGGACTGGACTTGATC...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTGCCCACCAATTTCTTaGACAGAAGAGATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: GAVILREVTQEWKTKYCMCPPIS*TEEIAN
Trigger: ATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCA...CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGTCAGTGTTTGTGCAATaGAGGTATACTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILSVFVQ*RYTRSF
Trigger: GAAGCTTCGAGTATACCTTCATTGCACAAACACTGA...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTACCGCAAGTACTTGGTaGCATTATGGAGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPTASTW*HYGGLW
Trigger: CCATAAACCTCCATAATGTCACCAAGTACTTGCGGT...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGTTGGAAAGTAATCCATaGGGTCCCAAAGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILLESNP*GPKGLR
Trigger: TCTAAGACCTTTGGGACCTCATGGATTACTTTCCAA...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGAAAGGTGGCAAGGTTTaGTCATCCACCATCTTTAGA +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILKGGKV*SSTIFR
Trigger: TCTAAAGATGGTGGATGATCAAACCTTGCCACCTTT...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCAAAGGTGGCAAGGTTTaGTCATCCACCATCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGKGGKV*SSTIFR
Trigger: TCTAAAGATGGTGGATGATCAAACCTTGCCACCTTT...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTGCTTAAAGTTGCAGTaGGCCAAGATCGCACCATGG +
Preference number: 4 (lower is better)
Translates to: YPKGSNSGMENQILHVLTCLKLQ*AKIAPW
Trigger: CCATGGTGCGATCTTGGCTCACTGCAACTTTAAGCA...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp AGCTTAGCTGTAGGTACACAAGAACATACACAGTGGTATAAGGGATGTTGGAGAAGAGGTAACATCAAATaGTCTCCTGCTGTACCATGC +
Preference number: 4 (lower is better)
Translates to: SLAVGTQEHTQWYKGCWRRGNIK*SPAVPC
Trigger: GCATGGTACAGCAGGAGATCATTTGATGTTACCTCT...TCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTGGAGCCTGGCCTGTTTaGACGTCTAGTTATGTGGGA +
Preference number: 4 (lower is better)
Translates to: REVTQEWKTKYCMFSLISGAWPV*TSSYVG
Trigger: TCCCACATAACTAGACGTTCAAACAGGCCAGGCTCC...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCTGCTGTGAGAAGCTCTaGAAAAGAGTTATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTCCEKL*KRVIQV
Trigger: GACTTGAATAACTCTTTTTCAGAGCTTCTCACAGCA...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACACACATTACCCATTTCTaGACAATAAGACATGAGGAG +
Preference number: 4 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETHITHF*TIRHEE
Trigger: CTCCTCATGTCTTATTGTTCAGAAATGGGTAATGTG...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp GGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTATTGCTTAAGCGTTGGCAGTGACTGGTaGAATGGCCACATTACCCAT +
Preference number: 4 (lower is better)
Translates to: GLFERLVMWEYTFPYCLSVGSDW*NGHITH
Trigger: ATGGGTAATGTGGCCATTTCACCAGTCACTGCCAAC...GCTTAAGCAATAAGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGAAATCTTCTCCTAACTaGGACCCATTGATGAAAATA +
Preference number: 4 (lower is better)
Translates to: FAATWTELGAVILREVTQKSSPN*DPLMKI
Trigger: TATTTTCATCAATGGGTCGCAGTTAGGAGAAGATTT...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTTCTTGCCAGGCCTGGTaGTCTCAACCACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: REVTQEWKTKYCMFSLISSCQAW*SQPPGK
Trigger: TTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGA...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGCTAACCAGACCTTCTTaGCAGGCCTGGTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: RFMAYRVKSPSLYLGLSVLTRPS*QAWCSQ
Trigger: TTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAG...CACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATACTAACCAGACCTTCTTaGCAGGCCTGGTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LREVTQEWKTKYCMFSLILTRPS*QAWCSQ
Trigger: TTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAG...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTCAAGCACCCACTAGTTaGTTTGCAAGGTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPQAPTS*FARYLL
Trigger: AAGCAGATACCTTGCAAAGCAACTAGTGGGTGCTTG...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATACATCAAATGATCTCCTaGTGTACCATGCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIIHQMIS*CTMLYS
Trigger: GGAGTACAGCATGGTACAGCAGGAGATCATTTGATG...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTATCCTTCGCTTCCTTaGTTCCTGACCATATTAGGA +
Preference number: 4 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGYPSLP*FLTILG
Trigger: TCCTAATATGGTCAGGAAGCAAGGAAGCGAAGGATA...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp ATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAGGAGACAAGCCTCTaGCCAAGGTACGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: MAYRVKSPSLYLGLSVFVQETSL*PRYEAL
Trigger: CAAAGCTTCGTACCTTGGCCAGAGGCTTGTCTCCTG...CACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATAGGTTGATTCCTTCTTaGGATCGAAAATTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDRLIPS*DRKLGS
Trigger: ACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCT...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTAGTGCTCTCAACCACCTaGAAAACTTTTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: DMRRHEERFAVRSSEKELVLSTT*KTFCTD
Trigger: ATCTGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCAC...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp CCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATTCCTTCTTTATACCTTaGATTGTCAGTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PVNFLAGEVFPLKVARFDSFFIP*IVSVCA
Trigger: TGCACAAACACTGACAATCCAAGGTATAAAGAAGGA...ATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp GCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGTCCTTCTTTATACCTTaGATTGTCAGTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: AELQCSVCRLTNTLSIPKSFFIP*IVSVCA
Trigger: TGCACAAACACTGACAATCCAAGGTATAAAGAAGGA...CTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACTACTTGGTGACATTATaGAGGTTTATGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENYLVTL*RFMAYR
Trigger: TCTGTATGCCATAAACCTCCATAATGTCACCAAGTA...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAGTGGTCCTAGCTACTTaGGAGGCTAAGCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LREVTQEWKTKYCMFSLIVVLAT*EAKQED
Trigger: ATCCTCCTGCTTAGCCTCCCAAGTAGCTAGGACCAC...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp CTGGTAAAAAGCGCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCACTTTAAATAAAGACTaGTTGTGGTGGCTAATCGCT +
Preference number: 4 (lower is better)
Translates to: LVKSAELQCSVCRLTNTLTLNKD*LWWLIA
Trigger: AGCGATTAGCCACCACAACCAGTCTTTATTTAAAGT...GAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGCGCTTTTTACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACACCATGTTGGCCAGGCTaGTATCAAATTCCTCACGTC +
Preference number: 4 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTPCWPG*YQIPHV
Trigger: GACGTGAGGAATTTGATACCAGCCTGGCCAACATGG...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
3UTR CAA 72 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTaGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SAIKKNNVFCSN*DGTGGCYPKGS
Trigger: ACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATATGCAAATATCCTGGTTaGCTTGAGATTGCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIICKYPG*LEIASN
Trigger: GTTACTGGCAATCTCAAGTCAACCAGGATATTTGCA...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATATGCCCACCAATTTCTTaGACAGAAGAGATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIICPPIS*TEEIAN
Trigger: ATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCA...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTTGCCCACCAATTTCTTaGACAGAAGAGATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: TLDCQCLCNEGILEASFSCPPIS*TEEIAN
Trigger: ATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCA...AGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCAAAGCTTCCTTCTCTTTaGACCTTGCACGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: VILREVTQEWKTKYCMFSKLPSL*TLHACH
Trigger: ATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTT...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTTCAGTGTTTGTGCAATaGAGGTATACTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: TLDCQCLCNEGILEASFSSVFVQ*RYTRSF
Trigger: GAAGCTTCGAGTATACCTTCATTGCACAAACACTGA...AGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCATTAGAGTTAGACCATTaGGTTGGACAGATTTGGAAA +
Preference number: 4 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSLELDH*VGQIWK
Trigger: TTTCCAAATCTGTCCAACTCAATGGTCTAACTCTAA...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATTTAGAGTTAGACCATTaGGTTGGACAGATTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHLELDH*VGQIWK
Trigger: TTTCCAAATCTGTCCAACTCAATGGTCTAACTCTAA...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAATGCTTAAAGTTGCAGTaGGCCAAGATCGCACCATGG +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKCLKLQ*AKIAPW
Trigger: CCATGGTGCGATCTTGGCTCACTGCAACTTTAAGCA...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAATTATAGTCTTTCGCTaGCTAGCAACACTGCACAGA +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIIIIVFR*LATLHR
Trigger: TCTGTGCAGTGTTGCTAGTCAGCGAAAGACTATAAT...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGTGCTGTGAGAAGCTCTaGAAAAGAGTTATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILCCEKL*KRVIQV
Trigger: GACTTGAATAACTCTTTTTCAGAGCTTCTCACAGCA...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTAGACATGAGGAGACATaGGGAGAGGTTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: REVTQEWKTKYCMFSLISRHEET*GEVCCE
Trigger: CTCACAGCAAACCTCTCCTCATGTCTCCTCATGTCT...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp CATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAATTCTTGCCAGGCCTGGTaGTCTCAACCACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HTELNLLLYTLDCQCLCNSCQAW*SQPPGK
Trigger: TTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGA...ATTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp TACTTGGTGACATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATCTTGCCAGGCCTGGTaGTCTCAACCACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: YLVTLWRFMAYRVKSPSLSCQAW*SQPPGK
Trigger: TTTTCCAGGTGGTTGAGAGCACCAGGCCTGGCAAGA...TAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATGTCACCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp CATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAATCTAACCAGACCTTCTTaGCAGGCCTGGTGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: HTELNLLLYTLDCQCLCNLTRPS*QAWCSQ
Trigger: TTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAG...ATTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTTCAAAAATAAAACACTaGTGGGTGTGGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPSKIKH*WVWWLT
Trigger: TGTGAGCCACCACACCCAGCAGTGTTTTATTTTTGA...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATATATCCTTCGCTTCCTTaGTTCCTGACCATATTAGGA +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIIYPSLP*FLTILG
Trigger: TCCTAATATGGTCAGGAAGCAAGGAAGCGAAGGATA...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACAGCTACAGCCATCATaGTACCAGAGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: VILREVTQEWKTKYCMFSQLQPS*YQSLRM
Trigger: CATTCTCAGACTCTGGTAGCATGATGGCTGTAGCTG...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp GGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTATTGCTTAAGCCAGCTACAGCCATCATaGTACCAGAGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: GLFERLVMWEYTFPYCLSQLQPS*YQSLRM
Trigger: CATTCTCAGACTCTGGTAGCATGATGGCTGTAGCTG...GCTTAAGCAATAAGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAACAAGGTACGAAGCTTTaGAGAACCCAGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKQGTKL*RTQEDE
Trigger: CTCATCCTCCTGGGTTCTCCAAAGCTTCGTACCTTG...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAACAAGGTACGAAGCTTTaGAGAACCCAGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: AYRVKSPSLYLGLSVFVQQGTKL*RTQEDE
Trigger: CTCATCCTCCTGGGTTCTCCAAAGCTTCGTACCTTG...TTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCATTAGGAAGTCTGTCTTaGTGCCACCAAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VILREVTQEWKTKYCMFSLGSLS*CHQTSG
Trigger: ACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAA...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACAACTTTAAATAAAGACTaGTTGTGGTGGCTAATCGCT +
Preference number: 4 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETTLNKD*LWWLIA
Trigger: AGCGATTAGCCACCACAACCAGTCTTTATTTAAAGT...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGGTTCTCACTTATAAGTaGAAGCTTAGCTGTAGGTAC +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILVLTYK*KLSCRY
Trigger: GTACCTACAGCTAAGCTTCCACTTATAAGTGAGAAC...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCGTTCTCACTTATAAGTaGAAGCTTAGCTGTAGGTAC +
Preference number: 4 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGVLTYK*KLSCRY
Trigger: GTACCTACAGCTAAGCTTCCACTTATAAGTGAGAAC...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTATTCCCATTCGGGCTaGCAGGCCCAATTTATCCAG +
Preference number: 4 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDYSHSG*QAQFIQ
Trigger: CTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATA...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR TCA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTGAATCTCCTCGCCTCTaGATTGTCATTAACCATTTT +
Preference number: 4 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPESPRL*IVINHF
Trigger: AAAATGGTTAATGACAATTCAGAGGCGAGGAGATTC...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR TCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATACACATTACCCATTTCTaGACAATAAGACATGAGGAG +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIIHITHF*TIRHEE
Trigger: CTCCTCATGTCTTATTGTTCAGAAATGGGTAATGTG...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATTAGAACTGTTCCACTaGAAATCTGCTGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATLELFH*KSAVLN
Trigger: ATTAAGAACAGCAGATTTGCAGTGGAACAGTTCTAA...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCCTTCTCTTTGAACCTTaGACGCTTGCCATTAACACC +
Preference number: 4 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCLLFEP*TLAINT
Trigger: GGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAG...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTGCTTTGCAAGGTATCTaGTTCCTTTCCTATAACTTG +
Preference number: 4 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPALQGI*FLSYNL
Trigger: CAAGTTATAGGAAAGGAAGCAGATACCTTGCAAAGC...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAAAGAATAATGTATTTTaGAGCAACTTGGACGGAACT +
Preference number: 4 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSKNNVF*SNLDGT
Trigger: AGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTT...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGAGGTTGATTCCTTCTTaGGATCGAAAATTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILRLIPS*DRKLGS
Trigger: ACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCT...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCCATTATGGAGGTTTATaGCATACAGAGTTAAATCTC +
Preference number: 4 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTHYGGL*HTELNL
Trigger: GAGATTTAACTCTGTATGCCATAAACCTCCATAATG...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACACATTATGGAGGTTTATaGCATACAGAGTTAAATCTC +
Preference number: 4 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETHYGGL*HTELNL
Trigger: GAGATTTAACTCTGTATGCCATAAACCTCCATAATG...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGTTAGACCATTGAGTTaGACAGATTTGGAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSVRPLS*TDLESN
Trigger: ATTACTTTCCAAATCTGTCCAACTCAATGGTCTAAC...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCGTTAGACCATTGAGTTaGACAGATTTGGAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTVRPLS*TDLESN
Trigger: ATTACTTTCCAAATCTGTCCAACTCAATGGTCTAAC...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCATGCAAGCAGCAACTTTaGCATTTCTTATCACAAAAA +
Preference number: 4 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSCKQQL*HFLSQK
Trigger: TTTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCA...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAAATAAAGACTGGTTGTaGTGGCTAATCGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKNKDWL*WLIAVP
Trigger: GGGGACAGCGATTAGCCACCACAACCAGTCTTTATT...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp GGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGGAAGTAACTCAGGAATaGAAAACCAAATACTGCATG +
Preference number: 4 (lower is better)
Translates to: GAVILREVTQEWKTKYCMEVTQE*KTKYCM
Trigger: CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTC...CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACATCTCTCTTCAAAGGTTaGTTCCTTCTTGGGATCGAA +
Preference number: 4 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTSLFKG*FLLGIE
Trigger: TTCGATCCCAAGAAGGAATCAACCTTTGAAGAGAGA...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTTTATACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCAGTAGGTGCTGTTCTTaGACTTTTTCTGGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: LYTLDCQCLCNEGILEASSRCCS*TFSGSV
Trigger: AACACTACCAGAAAAAGTTCAAGAACAGCACCTACT...GGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGTATAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTGATCAAGTCCAGTCCTaGGCAGTTTGCAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: REVTQEWKTKYCMFSLISDQVQS*AVCKSV
Trigger: TACACTTTTGCAAACTGCTCAGGACTGGACTTGATC...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp AGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGGTGATGCCATGTAACTaGATCAATCACTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: RFMAYRVKSPSLYLGLSVVMPCN*INHFST
Trigger: GGTGGAGAAGTGATTGATTCAGTTACATGGCATCAC...CACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp TTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGAAGCTTCCTTCTCTTTaGACCTTGCACGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LWHTELNLLLYTLDCQCLKLPSL*TLHACH
Trigger: ATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTT...CAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAATAAGCTTCCTTCTCTTTaGACCTTGCACGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: HTELNLLLYTLDCQCLCNKLPSL*TLHACH
Trigger: ATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTT...ATTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCTCAGTGTTTGTGCAATaGAGGTATACTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCSVFVQ*RYTRSF
Trigger: GAAGCTTCGAGTATACCTTCATTGCACAAACACTGA...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACATTGGAAAGTAATCCATaGGGTCCCAAAGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTLESNP*GPKGLR
Trigger: TCTAAGACCTTTGGGACCTCATGGATTACTTTCCAA...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGGAGAGGTTTGCTGTaGGAAGCTCTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LREVTQEWKTKYCMFSLIRRGLL*EALKKS
Trigger: ACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCT...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTCTGAACAATAAGACATaGGGAGACATGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: REVTQEWKTKYCMFSLISLNNKT*GDMRRG
Trigger: ACCTCTCCTCATGTCTCCTCATGTCTTATTGTTCAG...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAATCAGCCTTCAGGAAGTTaGGTAGGTGCTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: HTELNLLLYTLDCQCLCNQPSGS*VGAVLE
Trigger: TTCAAGAACAGCACCTACTCAACTTCCTGAAGGCTG...ATTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508891.5
CDS-3UTR GCA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGAAATCTTCTCCTAACTaGGACCCATTGATGAAAATA +
Preference number: 4 (lower is better)
Translates to: TGGCYPKGSNSGMENQILKSSPN*DPLMKI
Trigger: TATTTTCATCAATGGGTCGCAGTTAGGAGAAGATTT...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTTCTCCTGCTGTACCATaGTGTACTCCCAAAGAAATC +
Preference number: 4 (lower is better)
Translates to: REVTQEWKTKYCMFSLISSPAVP*CTPKEI
Trigger: GATTTCTTTGGGAGTACAGCATGGTACAGCAGGAGA...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATACATCAAATGATCTCCTaGTGTACCATGCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: LREVTQEWKTKYCMFSLIHQMIS*CTMLYS
Trigger: GGAGTACAGCATGGTACAGCAGGAGATCATTTGATG...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CCA 90 bp ACATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTAGGAAGTCTGTCTTaGTGCCACCAAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TLWRFMAYRVKSPSLYLGLGSLS*CHQTSG
Trigger: ACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAA...TCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp GGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTATTGCTTAAGCGTGCTCTCAACCACCTaGAAAACTTTTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: GLFERLVMWEYTFPYCLSVLSTT*KTFCTD
Trigger: ATCTGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCAC...GCTTAAGCAATAAGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp ACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTTACTTGGTGACATTATaGAGGTTTATGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: TLDCQCLCNEGILEASFSYLVTL*RFMAYR
Trigger: TCTGTATGCCATAAACCTCCATAATGTCACCAAGTA...AGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTTACTTGGTGACATTATaGAGGTTTATGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPYLVTL*RFMAYR
Trigger: TCTGTATGCCATAAACCTCCATAATGTCACCAAGTA...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GTAGTTTCCTGCTCCAAAGAATACTTGCCTCATCACCACTTCTATTCCCATTCGGTTAGACCATTGAGTTaGACAGATTTGGAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: VVSCSKEYLPHHHFYSHSVRPLS*TDLESN
Trigger: ATTACTTTCCAAATCTGTCCAACTCAATGGTCTAAC...CGAATGGGAATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCAGGAAACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTGAAGTAACTCAGGAATaGAAAACCAAATACTGCATG +
Preference number: 4 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPEVTQE*KTKYCM
Trigger: CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTC...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp AGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTCTCTCTTCAAAGGTTaGTTCCTTCTTGGGATCGAA +
Preference number: 4 (lower is better)
Translates to: RFMAYRVKSPSLYLGLSVSLFKG*FLLGIE
Trigger: TTCGATCCCAAGAAGGAATCAACCTTTGAAGAGAGA...CACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTTCAGTGTTTGTGCAATaGAGGTATACTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: REVTQEWKTKYCMFSLISSVFVQ*RYTRSF
Trigger: GAAGCTTCGAGTATACCTTCATTGCACAAACACTGA...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp TTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGACCGCAAGTACTTGGTaGCATTATGGAGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: LWHTELNLLLYTLDCQCLTASTW*HYGGLW
Trigger: CCATAAACCTCCATAATGTCACCAAGTACTTGCGGT...CAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CTTTATACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTAGAGTTAGACCATTaGGTTGGACAGATTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LYTLDCQCLCNEGILEASLELDH*VGQIWK
Trigger: TTTCCAAATCTGTCCAACTCAATGGTCTAACTCTAA...GGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGTATAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAATTATAGTCTTTCGCTaGCTAGCAACACTGCACAGA +
Preference number: 4 (lower is better)
Translates to: LREVTQEWKTKYCMFSLIIIVFR*LATLHR
Trigger: TCTGTGCAGTGTTGCTAGTCAGCGAAAGACTATAAT...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp ACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTTTAGAACTGTTCCACTaGAAATCTGCTGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: TLDCQCLCNEGILEASFSLELFH*KSAVLN
Trigger: ATTAAGAACAGCAGATTTGCAGTGGAACAGTTCTAA...AGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000509906.5
CDS-3UTR GCA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAAAGAATAATGTATTTTaGAGCAACTTGGACGGAACT +
Preference number: 4 (lower is better)
Translates to: CRLTNTLSIPKGYSETIIKNNVF*SNLDGT
Trigger: AGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTT...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGAATAATGTATTTTaGAGCAACTTGGACGGAACT +
Preference number: 4 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPKNNVF*SNLDGT
Trigger: AGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTT...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAAAATGTTATACCCCTTaGAAGAGCAGTAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKKCYTP*KSSSPG
Trigger: TCCTGGACTACTGCTCTTCCAAGGGGTATAACATTT...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
39% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp ACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTGTTAGACCATTGAGTTaGACAGATTTGGAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: TLDCQCLCNEGILEASFSVRPLS*TDLESN
Trigger: ATTACTTTCCAAATCTGTCCAACTCAATGGTCTAAC...AGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTGTTCTCACTTATAAGTaGAAGCTTAGCTGTAGGTAC +
Preference number: 4 (lower is better)
Translates to: YPKGSNSGMENQILHVLTVLTYK*KLSCRY
Trigger: GTACCTACAGCTAAGCTTCCACTTATAAGTGAGAAC...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR TCA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTCTCTCTTCAAAGGTTaGTTCCTTCTTGGGATCGAA +
Preference number: 4 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDSLFKG*FLLGIE
Trigger: TTCGATCCCAAGAAGGAATCAACCTTTGAAGAGAGA...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAATTTGGAAAGTAATCCATaGGGTCCCAAAGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: HTELNLLLYTLDCQCLCNLESNP*GPKGLR
Trigger: TCTAAGACCTTTGGGACCTCATGGATTACTTTCCAA...ATTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTTTAGAGTTAGACCATTaGGTTGGACAGATTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACLELDH*VGQIWK
Trigger: TTTCCAAATCTGTCCAACTCAATGGTCTAACTCTAA...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp ACATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGAAAAGGTGGCAAGGTTTaGTCATCCACCATCTTTAGA +
Preference number: 4 (lower is better)
Translates to: TLWRFMAYRVKSPSLYLGKGGKV*SSTIFR
Trigger: TCTAAAGATGGTGGATGATCAAACCTTGCCACCTTT...TCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATAAAGGTGGCAAGGTTTaGTCATCCACCATCTTTAGA +
Preference number: 4 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDKGGKV*SSTIFR
Trigger: TCTAAAGATGGTGGATGATCAAACCTTGCCACCTTT...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR GCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAGCTCCAAAGAATACTTaGCTCATCACCACTTCTATT +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKAPKNT*LITTSI
Trigger: AATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGC...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGGCTCCAAAGAATACTTaGCTCATCACCACTTCTATT +
Preference number: 4 (lower is better)
Translates to: RFMAYRVKSPSLYLGLSVAPKNT*LITTSI
Trigger: AATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGC...CACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CCA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTAGGTTGATTCCTTCTTaGGATCGAAAATTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACRLIPS*DRKLGS
Trigger: ACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCT...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAGGTTGATTCCTTCTTaGGATCGAAAATTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCRLIPS*DRKLGS
Trigger: ACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCT...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp TTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGGTGCTCTCAACCACCTaGAAAACTTTTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: LWHTELNLLLYTLDCQCLVLSTT*KTFCTD
Trigger: ATCTGTGCAAAAAGTTTTCCAGGTGGTTGAGAGCAC...CAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTCCTTCTTTATACCTTaGATTGTCAGTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: YPKGSNSGMENQILHVLTSFFIP*IVSVCA
Trigger: TGCACAAACACTGACAATCCAAGGTATAAAGAAGGA...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTATTGCTTAAGCTCCTTCTTTATACCTTaGATTGTCAGTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GLFERLVMWEYTFPYCLSSFFIP*IVSVCA
Trigger: TGCACAAACACTGACAATCCAAGGTATAAAGAAGGA...GCTTAAGCAATAAGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTATTGCTTAAGCTACTTGGTGACATTATaGAGGTTTATGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: GLFERLVMWEYTFPYCLSYLVTL*RFMAYR
Trigger: TCTGTATGCCATAAACCTCCATAATGTCACCAAGTA...GCTTAAGCAATAAGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTGAAGTAACTCAGGAATaGAAAACCAAATACTGCATG +
Preference number: 4 (lower is better)
Translates to: YPKGSNSGMENQILHVLTEVTQE*KTKYCM
Trigger: CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTC...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAACAAAAGCTTCCCAATTaGAAAGTAATCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKQKLPN*KVIHEV
Trigger: GACCTCATGGATTACTTTCCAATTGGGAAGCTTTTG...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000681769.1
CDS-3UTR TCA 90 bp TACTTGGTGACATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTAAGTAGGTGCTGTTCTTaGACTTTTTCTGGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: YLVTLWRFMAYRVKSPSLSRCCS*TFSGSV
Trigger: AACACTACCAGAAAAAGTTCAAGAACAGCACCTACT...TAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATGTCACCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR TCA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATATTAGAGTTAGACCATTaGGTTGGACAGATTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LREVTQEWKTKYCMFSLILELDH*VGQIWK
Trigger: TTTCCAAATCTGTCCAACTCAATGGTCTAACTCTAA...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTTAGAACTGTTCCACTaGAAATCTGCTGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: YPKGSNSGMENQILHVLTLELFH*KSAVLN
Trigger: ATTAAGAACAGCAGATTTGCAGTGGAACAGTTCTAA...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTTTAGAACTGTTCCACTaGAAATCTGCTGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACLELFH*KSAVLN
Trigger: ATTAAGAACAGCAGATTTGCAGTGGAACAGTTCTAA...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000509906.5
CDS-3UTR CCA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAAGGTTGATTCCTTCTTaGGATCGAAAATTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AVRSSEKELFKSMKETQKRLIPS*DRKLGS
Trigger: ACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCT...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CCA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCCATTATGGAGGTTTATaGCATACAGAGTTAAATCTC +
Preference number: 4 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCHYGGL*HTELNL
Trigger: GAGATTTAACTCTGTATGCCATAAACCTCCATAATG...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTGCAAGCAGCAACTTTaGCATTTCTTATCACAAAAA +
Preference number: 4 (lower is better)
Translates to: YPKGSNSGMENQILHVLTCKQQL*HFLSQK
Trigger: TTTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCA...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR GCA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTTTAGAACTGTTCCACTaGAAATCTGCTGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: REVTQEWKTKYCMFSLISLELFH*KSAVLN
Trigger: ATTAAGAACAGCAGATTTGCAGTGGAACAGTTCTAA...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR GCA 90 bp AGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGAAATCTTCTCCTAACTaGGACCCATTGATGAAAATA +
Preference number: 4 (lower is better)
Translates to: RFMAYRVKSPSLYLGLSVKSSPN*DPLMKI
Trigger: TATTTTCATCAATGGGTCGCAGTTAGGAGAAGATTT...CACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509906.5
CDS-3UTR CCA 90 bp TACTTGGTGACATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATCCTTCTTTATACCTTaGATTGTCAGTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: YLVTLWRFMAYRVKSPSLSFFIP*IVSVCA
Trigger: TGCACAAACACTGACAATCCAAGGTATAAAGAAGGA...TAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATGTCACCAAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp AGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGGTTAGACCATTGAGTTaGACAGATTTGGAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: RFMAYRVKSPSLYLGLSVVRPLS*TDLESN
Trigger: ATTACTTTCCAAATCTGTCCAACTCAATGGTCTAAC...CACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp ACATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGACATTATGGAGGTTTATaGCATACAGAGTTAAATCTC +
Preference number: 4 (lower is better)
Translates to: TLWRFMAYRVKSPSLYLGHYGGL*HTELNL
Trigger: GAGATTTAACTCTGTATGCCATAAACCTCCATAATG...TCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGCAAGCAGCAACTTTaGCATTTCTTATCACAAAAA +
Preference number: 4 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDCKQQL*HFLSQK
Trigger: TTTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCA...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CCA 90 bp TTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAAGCAGCAACTTTaGCATTTCTTATCACAAAAA +
Preference number: 4 (lower is better)
Translates to: LWHTELNLLLYTLDCQCLCKQQL*HFLSQK
Trigger: TTTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCA...CAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS CCA 90 bp ATGGTGACGGACAGGAACGAGGGGCTCACCAGGTGCAGCGGCTCCTaGGTGAAGAAGTCCAGGTCCACGACGTCCTGTGCTTGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: MVTDRNEGLTRCSGS*VKKSRSTTSCACAG
Trigger: ACCTGCGCAAGCACAGGACGTCGTGGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTCGTTCCTGTCCGTCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS GCA 90 bp AGGTTGGCGTCAATGGTGACGGACAGGAACGAGGGGCTCACCAGGTaGAGCGGCTCCTGGGTGAAGAAGTCCAGGTCCACGACGTCCTGT +
Preference number: 5 (lower is better)
Translates to: RLASMVTDRNEGLTR*SGSWVKKSRSTTSC
Trigger: ACAGGACGTCGTGGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS-3UTR CAA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTCACGACGTCCTGTGCTaGCGCAGGTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVHDVLC*RRSGQG
Trigger: GCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGTG...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp GCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGCACGACGTCCTGTGCTaGCGCAGGTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: AELQCSVCRLTNTLSIPKHDVLC*RRSGQG
Trigger: GCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGTG...CTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACACACGACGTCCTGTGCTaGCGCAGGTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETHDVLC*RRSGQG
Trigger: GCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGTG...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGGGTCCGTGGCCAGGTaGGCGTCAATGGTGACGGAC +
Preference number: 5 (lower is better)
Translates to: FAATWTELGAVILREVTQGSVAR*ASMVTD
Trigger: GTCCGTCACCATTGACGCCAACCTGGCCACGGACCC...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTGGGTCCGTGGCCAGGTaGGCGTCAATGGTGACGGAC +
Preference number: 5 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVGSVAR*ASMVTD
Trigger: GTCCGTCACCATTGACGCCAACCTGGCCACGGACCC...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp ATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAGGGTCCGTGGCCAGGTaGGCGTCAATGGTGACGGAC +
Preference number: 5 (lower is better)
Translates to: MRKLASPVNFLAGEVFPLGSVAR*ASMVTD
Trigger: GTCCGTCACCATTGACGCCAACCTGGCCACGGACCC...TAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CTGGTAAAAAGCGCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCGAGCGCAGCAGCATCTaGGGCTCACCTGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LVKSAELQCSVCRLTNTLERSSI*GSPGCS
Trigger: GGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCTC...GAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGCGCTTTTTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp GGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGCACGACGTCCTGTGCTaGCGCAGGTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GAVILREVTQEWKTKYCMHDVLC*RRSGQG
Trigger: GCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGTG...CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCACATCACCCACACCCACTaGAAGGGTGCGGAGATGGCC +
Preference number: 5 (lower is better)
Translates to: LITTSIPIRADRPNLSSHITHTH*KGAEMA
Trigger: GGCCATCTCCGCACCCTTCAAGTGGGTGTGGGTGAT...GTGGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATGAGCGCAGCAGCATCTaGGGCTCACCTGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHERSSI*GSPGCS
Trigger: GGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCTC...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp GCTTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCACCTAACCAGACCTTCTaGCCAGGCCTGGTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: ASFSLNLARLPLTPWCPPPNQTF*PGLVLS
Trigger: TGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG...TGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp AGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGATCACCCACACCCACTaGAAGGGTGCGGAGATGGCC +
Preference number: 5 (lower is better)
Translates to: RKLASPVNFLAGEVFPLKITHTH*KGAEMA
Trigger: GGCCATCTCCGCACCCTTCAAGTGGGTGTGGGTGAT...CTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCGAGCGCAGCAGCATCTaGGGCTCACCTGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGERSSI*GSPGCS
Trigger: GGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCTC...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp CTTTATACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCCACGACGTCCTGTGCTaGCGCAGGTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LYTLDCQCLCNEGILEASHDVLC*RRSGQG
Trigger: GCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGTG...GGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGTATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTCCTAACCAGACCTTCTaGCCAGGCCTGGTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVPNQTF*PGLVLS
Trigger: TGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGGAAGCTTCCTTCTCTTaGAACCTTGCACGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQEASFS*NLARLP
Trigger: TGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTTC...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTCACGACGTCCTGTGCTaGCGCAGGTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACHDVLC*RRSGQG
Trigger: GCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGTG...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CTGGTAAAAAGCGCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCCCTAACCAGACCTTCTaGCCAGGCCTGGTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: LVKSAELQCSVCRLTNTLPNQTF*PGLVLS
Trigger: TGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG...GAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGCGCTTTTTACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CTGCTGTACCATGCTGTACTCCCAAAGAAATCCCAGCACCTGGAAGGCCAAGGTAAGCAGGAGGATGACTaGAGCCCAGGAGTTAAAAGG +
Preference number: 5 (lower is better)
Translates to: LLYHAVLPKKSQHLEGQGKQEDD*SPGVKR
Trigger: CCTTTTAACTCCTGGGCTCAAGTCATCCTCCTGCTT...ACCTTGGCCTTCCAGGTGCTGGGATTTCTTTGGGAGTACAGCATGGTACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGGAGTTCAGGACCAGTTaGGGTAACATAGCGAGACCC +
Preference number: 5 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQEFRTS*GNIARP
Trigger: GGGTCTCGCTATGTTACCCAAACTGGTCCTGAACTC...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp CTGCTGTACCATGCTGTACTCCCAAAGAAATCCCAGCACCTGGAAGGCCAAGGTTGGGGTTTCACCATGTaGGCCAGGCTGGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: LLYHAVLPKKSQHLEGQGWGFTM*ARLVSN
Trigger: ATTTGATACCAGCCTGGCCAACATGGTGAAACCCCA...ACCTTGGCCTTCCAGGTGCTGGGATTTCTTTGGGAGTACAGCATGGTACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS GCA 90 bp AGGTTGATTCCTTCTTGGGATCGAAAATTAGGAAGTCTGTCTTGGTaGCACCAAACCTCAGGTACGCAGGAGACAAGCCTCTGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: RLIPSWDRKLGSLSW*HQTSGTQETSLWPR
Trigger: CCTTGGCCAGAGGCTTGTCTCCTGCGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS-3UTR CAA 90 bp AGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCCTGGTTGACTTGAGATaGCCAGTAACTTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SKGAPPPYAELVSPNQTFLVDLR*PVTSLF
Trigger: GAAGAGAGAAGTTACTGGCAATCTCAAGTCAACCAG...GAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp CTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCACTTGCCATTAACACCTaGGTGCCCACCAATTTCTTG +
Preference number: 5 (lower is better)
Translates to: LASPVNFLAGEVFPLKVALAINT*VPTNFL
Trigger: CAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAG...TGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGAGGTGGGAGGATCAATaGAGTCCAGGAGTTCAGGAC +
Preference number: 5 (lower is better)
Translates to: FAATWTELGAVILREVTQRWEDQ*SPGVQD
Trigger: GTCCTGAACTCCTGGACTCAATTGATCCTCCCACCT...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCATCACCCACACCCACTaGAAGGGTGCGGAGATGGCC +
Preference number: 5 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGITHTH*KGAEMA
Trigger: GGCCATCTCCGCACCCTTCAAGTGGGTGTGGGTGAT...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405413.6
CDS CCA 90 bp CAAAGGTTGATTCCTTCTTGGGATCGAAAATTAGGAAGTCTGTCTTaGTGCCACCAAACCTCAGGTACGCAGGAGACAAGCCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: QRLIPSWDRKLGSLS*CHQTSGTQETSLWP
Trigger: TGGCCAGAGGCTTGTCTCCTGCGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS-3UTR CAA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCGAGCGCAGCAGCATCTaGGGCTCACCTGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCERSSI*GSPGCS
Trigger: GGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCTC...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp GGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTATTGCTTAAGCGGGTCCGTGGCCAGGTaGGCGTCAATGGTGACGGAC +
Preference number: 5 (lower is better)
Translates to: GLFERLVMWEYTFPYCLSGSVAR*ASMVTD
Trigger: GTCCGTCACCATTGACGCCAACCTGGCCACGGACCC...GCTTAAGCAATAAGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTGGGTCCGTGGCCAGGTaGGCGTCAATGGTGACGGAC +
Preference number: 5 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACGSVAR*ASMVTD
Trigger: GTCCGTCACCATTGACGCCAACCTGGCCACGGACCC...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CTTGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGGGGATGGATCCATATTaGCAAATATCCTGGTTGACT +
Preference number: 5 (lower is better)
Translates to: LVSPNQTFLPGLVLSTTWGMDPY*QISWLT
Trigger: AGTCAACCAGGATATTTGCAAATATGGATCCATCCC...CCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp AGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGACCTTCTTTAGAAAATCTTCCTaGGTAGCAGTCCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: SKGAPPPYAELVSPNQTFFRKSS*VAVRPF
Trigger: GAATGGACGGACTGCTACCAAGGAAGATTTTCTAAA...GAAGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCCTAACCAGACCTTCTaGCCAGGCCTGGTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: TGGCYPKGSNSGMENQILPNQTF*PGLVLS
Trigger: TGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTACCTAACCAGACCTTCTaGCCAGGCCTGGTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: DMRRHEERFAVRSSEKELPNQTF*PGLVLS
Trigger: TGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GCTTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCACTTGCCATTAACACCTaGGTGCCCACCAATTTCTTG +
Preference number: 5 (lower is better)
Translates to: ASFSLNLARLPLTPWCPPLAINT*VPTNFL
Trigger: CAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAG...TGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTTGAACCTTGCACGCTaGCCATTAACACCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVLNLAR*PLTPWC
Trigger: GCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAA...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TATATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCAGAAGCTTCCTTCTCTTaGAACCTTGCACGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: YMRKLASPVNFLAGEVFPEASFS*NLARLP
Trigger: TGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTTC...TGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACGTATTTTGCAGCAACTaGGACGGAACTGGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENVFCSN*DGTGGC
Trigger: ACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATAC...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAAGAGCGCAGCAGCATCTaGGGCTCACCTGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AYRVKSPSLYLGLSVFVQERSSI*GSPGCS
Trigger: GGAGCAGCCAGGTGAGCCCAAGATGCTGCTGCGCTC...TTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAGGGTCCGTGGCCAGGTaGGCGTCAATGGTGACGGAC +
Preference number: 5 (lower is better)
Translates to: AVRSSEKELFKSMKETQKGSVAR*ASMVTD
Trigger: GTCCGTCACCATTGACGCCAACCTGGCCACGGACCC...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TCGGATAGCAAGGGCGCTCCGCCTCCATATGCAGAGCTTGTTTCTCCTAACCAGAAGGTTGATTCCTTCTaGGGATCGAAAATTAGGAAG +
Preference number: 5 (lower is better)
Translates to: SDSKGAPPPYAELVSPNQKVDSF*GSKIRK
Trigger: CTTCCTAATTTTCGATCCCAAGAAGGAATCAACCTT...CTGGTTAGGAGAAACAAGCTCTGCATATGGAGGCGGAGCGCCCTTGCTATCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGCTGGTTGACTTGAGATaGCCAGTAACTTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQLVDLR*PVTSLF
Trigger: GAAGAGAGAAGTTACTGGCAATCTCAAGTCAACCAG...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GCCTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCGGGATGGATCCATATTaGCAAATATCCTGGTTGACT +
Preference number: 5 (lower is better)
Translates to: ASSPLLFPFGLTGPIYPAGMDPY*QISWLT
Trigger: AGTCAACCAGGATATTTGCAAATATGGATCCATCCC...GGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp ACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTCCTAACCAGACCTTCTaGCCAGGCCTGGTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: TLDCQCLCNEGILEASFSPNQTF*PGLVLS
Trigger: TGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGG...AGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TATATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCACTTGCCATTAACACCTaGGTGCCCACCAATTTCTTG +
Preference number: 5 (lower is better)
Translates to: YMRKLASPVNFLAGEVFPLAINT*VPTNFL
Trigger: CAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAG...TGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp GCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGTTGAACCTTGCACGCTaGCCATTAACACCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: AELQCSVCRLTNTLSIPKLNLAR*PLTPWC
Trigger: GCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAA...CTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CTTGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGTTGGATTGTCAGTGTTaGTGCAATGAAGGTATACTC +
Preference number: 5 (lower is better)
Translates to: LVSPNQTFLPGLVLSTTWLDCQC*CNEGIL
Trigger: GAGTATACCTTCATTGCACAAACACTGACAATCCAA...CCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp CTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTATCCAGCCACGGTAACCGCAAGTACTaGGTGACATTATGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: LITTSIPIRADRPNLSSHGNRKY*VTLWRF
Trigger: AAACCTCCATAATGTCACCAAGTACTTGCGGTTACC...GTGGCTGGATAAATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp CTGGTAAAAAGCGCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCGCTGAGGCAGGAGAATaGCTTAAAGTTGCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LVKSAELQCSVCRLTNTLAEAGE*LKVAVS
Trigger: GCTCACTGCAACTTTAAGCAATTCTCCTGCCTCAGC...GAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGCGCTTTTTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAGAGTTCAGGACCAGTTaGGGTAACATAGCGAGACCC +
Preference number: 5 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETEFRTS*GNIARP
Trigger: GGGTCTCGCTATGTTACCCAAACTGGTCCTGAACTC...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAAGGTGGGAGGATCAATaGAGTCCAGGAGTTCAGGAC +
Preference number: 5 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETRWEDQ*SPGVQD
Trigger: GTCCTGAACTCCTGGACTCAATTGATCCTCCCACCT...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp CTGGTAAAAAGCGCAGAACTGCAGTGTTCAGTTTGTAGACTGACCAACACCCTCGGAACCTCGTTGTTGTaGGCAGTGACTGGTGAAATG +
Preference number: 5 (lower is better)
Translates to: LVKSAELQCSVCRLTNTLGTSLL*AVTGEM
Trigger: CATTTCACCAGTCACTGCCAACAACAACGAGGTTCC...GAGGGTGTTGGTCAGTCTACAAACTGAACACTGCAGTTCTGCGCTTTTTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TATATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCAAGCCTTCAGGAAGCATaGCCTAGTTCCCAAGAAATG +
Preference number: 5 (lower is better)
Translates to: YMRKLASPVNFLAGEVFPSLQEA*PSSQEM
Trigger: CATTTCTTGGGAACTAGGCAATGCTTCCTGAAGGCT...TGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507150.5
CDS-3UTR CAA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGACTGGTTGACTTGAGATaGCCAGTAACTTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TAIMLPESENEASAKDGRLVDLR*PVTSLF
Trigger: GAAGAGAGAAGTTACTGGCAATCTCAAGTCAACCAG...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTCCTAACTGCGACCCATaGATGAAAATATCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVPNCDP*MKISAF
Trigger: GAAGGCTGATATTTTCATCAATGGGTCGCAGTTAGG...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509906.5
CDS-3UTR CAA 90 bp CTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCCACCATCTCTCCATATGCAGAGCTaGTTTCTCCTAACCAGACCT +
Preference number: 5 (lower is better)
Translates to: LAGEVFPLKVARFDHPPSLHMQS*FLLTRP
Trigger: AGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAG...AGATGGTGGATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp ATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATTACCCTTGAACCTTGCACGCTaGCCATTAACACCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: IIGTSLLLAVTGEMATLPLNLAR*PLTPWC
Trigger: GCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAA...GGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACAGAAGCTTCCTTCTCTTaGAACCTTGCACGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETEASFS*NLARLP
Trigger: TGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTTC...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGGTAACCGCAAGTACTaGGTGACATTATGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: FAATWTELGAVILREVTQGNRKY*VTLWRF
Trigger: AAACCTCCATAATGTCACCAAGTACTTGCGGTTACC...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CTTGTTTCTCCTAACCAGACCTTCTTGCCAGGCCTGGTGCTCTCAACCACCTGGTTTAGAGTTAGACCATaGAGTTGGACAGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: LVSPNQTFLPGLVLSTTWFRVRP*SWTDLE
Trigger: TTCCAAATCTGTCCAACTCAATGGTCTAACTCTAAA...CCAGGTGGTTGAGAGCACCAGGCCTGGCAAGAAGGTCTGGTTAGGAGAAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS CCA 90 bp GCTAGATTGGTGCCCGAGTCCAACCTATTCAAATATCTTTGGGGCTaGAACATCTCTAGGGTGCCTTTCATTTCTTACTTGAGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: ARLVPESNLFKYLWG*NISRVPFISYLSRC
Trigger: GCACCTACTCAAGTAAGAAATGAAAGGCACCCTAGAGATGTTCCAGCCCCAAAGATATTTGAATAGGTTGGACTCGGGCACCAATCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680713.1
CDS-3UTR CAA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGATTAGGAAGTCTGTCTaGGTGCCACCAAACCTCAGG +
Preference number: 5 (lower is better)
Translates to: TGGCYPKGSNSGMENQILIRKSV*VPPNLR
Trigger: CCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAAT...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GCTTCCTTCTCTTTGAACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAAAGGTTGATTCCTTCTaGGGATCGAAAATTAGGAAG +
Preference number: 5 (lower is better)
Translates to: ASFSLNLARLPLTPWCPPKVDSF*GSKIRK
Trigger: CTTCCTAATTTTCGATCCCAAGAAGGAATCAACCTT...TGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp TTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGTTTAGAAAATCTTCCTaGGTAGCAGTCCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: FAATWTELGAVILREVTQFRKSS*VAVRPF
Trigger: GAATGGACGGACTGCTACCAAGGAAGATTTTCTAAA...CTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TATATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTTAGAAAATCTTCCTaGGTAGCAGTCCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: YMRKLASPVNFLAGEVFPFRKSS*VAVRPF
Trigger: GAATGGACGGACTGCTACCAAGGAAGATTTTCTAAA...TGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCACTCCATATGCAGAGCTaGTTTCTCCTAACCAGACCT +
Preference number: 5 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSLHMQS*FLLTRP
Trigger: AGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAG...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ACAGCCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGATGCTCCAAAGAATACTaGCCTCATCACCACTTCTAT +
Preference number: 5 (lower is better)
Translates to: TAIMLPESENEASAKDGRCSKEY*PHHHFY
Trigger: ATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCA...TCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGTTGGATTGTCAGTGTTaGTGCAATGAAGGTATACTC +
Preference number: 5 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQLDCQC*CNEGIL
Trigger: GAGTATACCTTCATTGCACAAACACTGACAATCCAA...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TATATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCACTCCTTCTTTATACCTaGGATTGTCAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: YMRKLASPVNFLAGEVFPLLLYT*DCQCLC
Trigger: GCACAAACACTGACAATCCAAGGTATAAAGAAGGAG...TGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGGCTGAGGCAGGAGAATaGCTTAAAGTTGCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: TGGCYPKGSNSGMENQILAEAGE*LKVAVS
Trigger: GCTCACTGCAACTTTAAGCAATTCTCCTGCCTCAGC...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp GACATGAGGAGACATGAGGAGAGGTTTGCTGTGAGAAGCTCTGAAAAAGAGTTAAAGCAGGAGGATGACTaGAGCCCAGGAGTTAAAAGG +
Preference number: 5 (lower is better)
Translates to: DMRRHEERFAVRSSEKELKQEDD*SPGVKR
Trigger: CCTTTTAACTCCTGGGCTCAAGTCATCCTCCTGCTT...TAACTCTTTTTCAGAGCTTCTCACAGCAAACCTCTCCTCATGTCTCCTCATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGTATTTTGCAGCAACTaGGACGGAACTGGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: CRLTNTLSIPKGYSETIIVFCSN*DGTGGC
Trigger: ACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATAC...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATCTGGTTGACTTGAGATaGCCAGTAACTTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHLVDLR*PVTSLF
Trigger: GAAGAGAGAAGTTACTGGCAATCTCAAGTCAACCAG...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TATATGAGAAAGCTGGCAAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCAAATATCCTGGTTGACTaGAGATTGCCAGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: YMRKLASPVNFLAGEVFPNILVD*RLPVTS
Trigger: AGAAGTTACTGGCAATCTCAAGTCAACCAGGATATT...TGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTTGCCAGCTTTCTCATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCCCTAACTGCGACCCATaGATGAAAATATCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTPNCDP*MKISAF
Trigger: GAAGGCTGATATTTTCATCAATGGGTCGCAGTTAGG...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ACCTTGGATTGTCAGTGTTTGTGCAATGAAGGTATACTCGAAGCTTCCTTCTCTGAAGCTTCCTTCTCTTaGAACCTTGCACGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: TLDCQCLCNEGILEASFSEASFS*NLARLP
Trigger: TGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTTC...AGAGAAGGAAGCTTCGAGTATACCTTCATTGCACAAACACTGACAATCCAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATGGTAACCGCAAGTACTaGGTGACATTATGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHGNRKY*VTLWRF
Trigger: AAACCTCCATAATGTCACCAAGTACTTGCGGTTACC...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CCATCATGCTACCAGAGTCTGAGAATGAAGCCAGCGCTAAAGATGGCAGAGCAGTCCTCTCACATATTATaGCTGACAAAGAAAACCGAA +
Preference number: 5 (lower is better)
Translates to: PSCYQSLRMKPALKMAEQSSHIL*LTKKTE
Trigger: TTCGGTTTTCTTTGTCAGCAATAATATGTGAGAGGA...CTGCTCTGCCATCTTTAGCGCTGGCTTCATTCTCAGACTCTGGTAGCATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp GTGCTGGAGCCTGGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTAGGAGTTTCTGTTACTaGCAGCCAAAAGCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: VLEPGLFERLVMWEYTFPRSFCY*QPKASQ
Trigger: TTGGGAAGCTTTTGGCTGCAAGTAACAGAAACTCCT...AGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCCAGGCTCCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGATCACCCACACCCACTaGAAGGGTGCGGAGATGGCC +
Preference number: 5 (lower is better)
Translates to: LWHTELNLLLYTLDCQCLITHTH*KGAEMA
Trigger: GGCCATCTCCGCACCCTTCAAGTGGGTGTGGGTGAT...CAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS TCA 90 bp AACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATTTCTTaGACAGAAGAGATAGCCAATAATCATAAAGCCAGCTGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: NLARLPLTPWCPPIS*TEEIANNHKASCKG
Trigger: ACCTTTGCAGCTGGCTTTATGATTATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509906.5
CDS TCA 90 bp ATCTTTGGGGCTGGAACATCTCTAGGGTGCCTTTCATTTCTTACTTaGGTAGGTGCTGTTCTTGAACTTTTTCTGGTAGTGTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: IFGAGTSLGCLSFLT*VGAVLELFLVVFSE
Trigger: CTCCGAGAACACTACCAGAAAAAGTTCAAGAACAGCACCTACTCAAGTAAGAAATGAAAGGCACCCTAGAGATGTTCCAGCCCCAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680713.1
CDS-3UTR CAA 90 bp TTGGACGGAACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACAATATCCTGGTTGACTaGAGATTGCCAGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: LDGTGGCYPKGSNSGMENNILVD*RLPVTS
Trigger: AGAAGTTACTGGCAATCTCAAGTCAACCAGGATATT...GTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGTTCCGTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACAGGGATGGATCCATATTaGCAAATATCCTGGTTGACT +
Preference number: 5 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATGMDPY*QISWLT
Trigger: AGTCAACCAGGATATTTGCAAATATGGATCCATCCC...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACAGGGATGGATCCATATTaGCAAATATCCTGGTTGACT +
Preference number: 5 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETGMDPY*QISWLT
Trigger: AGTCAACCAGGATATTTGCAAATATGGATCCATCCC...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TCAGCCATAAAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCCCTAACTGCGACCCATaGATGAAAATATCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SAIKKNNVFCSNLDGTGGPNCDP*MKISAF
Trigger: GAAGGCTGATATTTTCATCAATGGGTCGCAGTTAGG...GCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTTTATGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTCTCCATATGCAGAGCTaGTTTCTCCTAACCAGACCT +
Preference number: 5 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPLHMQS*FLLTRP
Trigger: AGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAG...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AGCTTAGCTGTAGGTACACAAGAACATACACAGTGGTATAAGGGATGTTGGAGACTTGCCATTAACACCTaGGTGCCCACCAATTTCTTG +
Preference number: 5 (lower is better)
Translates to: SLAVGTQEHTQWYKGCWRLAINT*VPTNFL
Trigger: CAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAG...TCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AAGAAGAATAATGTATTTTGCAGCAACTTGGACGGAACTGGGGGCTGTTATCCTCTTGCCATTAACACCTaGGTGCCCACCAATTTCTTG +
Preference number: 5 (lower is better)
Translates to: KKNNVFCSNLDGTGGCYPLAINT*VPTNFL
Trigger: CAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAG...AGGATAACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATACATTATTCTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATACTTGCCATTAACACCTaGGTGCCCACCAATTTCTTG +
Preference number: 5 (lower is better)
Translates to: CRLTNTLSIPKGYSETIILAINT*VPTNFL
Trigger: CAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAG...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AGAATACTTGCCTCATCACCACTTCTATTCCCATTCGGGCTGACAGGCCCAATTTTGGATTGTCAGTGTTaGTGCAATGAAGGTATACTC +
Preference number: 5 (lower is better)
Translates to: RILASSPLLFPFGLTGPILDCQC*CNEGIL
Trigger: GAGTATACCTTCATTGCACAAACACTGACAATCCAA...AATTGGGCCTGTCAGCCCGAATGGGAATAGAAGTGGTGATGAGGCAAGTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp AAGCCCAGTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTATGCAAGCAGCAACTTaGGCATTTCTTATCACAAAA +
Preference number: 5 (lower is better)
Translates to: KPSELPGRRGFSIKGGKVMQAAT*AFLITK
Trigger: TTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCAT...AACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCACTGGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACATTAAATAAAGACTGGTaGTGGTGGCTAATCGCTGTC +
Preference number: 5 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETLNKDW*WWLIAV
Trigger: GACAGCGATTAGCCACCACAACCAGTCTTTATTTAA...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGAGGAGTTTCTGTTACTaGCAGCCAAAAGCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: TGGCYPKGSNSGMENQILRSFCY*QPKASQ
Trigger: TTGGGAAGCTTTTGGCTGCAAGTAACAGAAACTCCT...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTGTATTTTGCAGCAACTaGGACGGAACTGGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: YPKGSNSGMENQILHVLTVFCSN*DGTGGC
Trigger: ACAGCCCCCAGTTCCGTCCAAGTTGCTGCAAAATAC...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS TCA 90 bp AACCTTGCACGCTTGCCATTAACACCTTGGTGCCCACCAATTTCTTaGACAGAAGAGATAGCCAATAATCCTGGAAAACTTTTTGCACAG +
Preference number: 5 (lower is better)
Translates to: NLARLPLTPWCPPIS*TEEIANNPGKLFAQ
Trigger: CTGTGCAAAAAGTTTTCCAGGATTATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAGCGTGCAAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512196.5
CDS TCA 90 bp ATCTCTAGGGTGCCTTTCATTTCTTACTTGAGTAGGTGCTGTTCTTaGACTTTTTCTGGTAGTGTTCTCGGAGTAGCAATTGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: ISRVPFISYLSRCCS*TFSGSVLGVAIAPG
Trigger: ACCAGGAGCAATTGCTACTCCGAGAACACTACCAGAAAAAGTTCAAGAACAGCACCTACTCAAGTAAGAAATGAAAGGCACCCTAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680713.1
CDS CCA 90 bp CTTGAGATTGCCAGTAACTTCTCTCTTCAAAGGTTGATTCCTTCTTaGGATCGAAAATTAGGAAGTCTGTCTTGGTGCCACCAAACCTCA +
Preference number: 5 (lower is better)
Translates to: LEIASNFSLQRLIPS*DRKLGSLSWCHQTS
Trigger: TGAGGTTTGGTGGCACCAAGACAGACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCTTTGAAGAGAGAAGTTACTGGCAATCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS-3UTR CAA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTATTAGGAAGTCTGTCTaGGTGCCACCAAACCTCAGG +
Preference number: 5 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACIRKSV*VPPNLR
Trigger: CCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAAT...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp GGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTATTGCTTAAGCATTAGGAAGTCTGTCTaGGTGCCACCAAACCTCAGG +
Preference number: 5 (lower is better)
Translates to: GLFERLVMWEYTFPYCLSIRKSV*VPPNLR
Trigger: CCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAAT...GCTTAAGCAATAAGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CAGTGTTCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAAAGGTTGATTCCTTCTaGGGATCGAAAATTAGGAAG +
Preference number: 5 (lower is better)
Translates to: QCSVCRLTNTLSIPKGYSKVDSF*GSKIRK
Trigger: CTTCCTAATTTTCGATCCCAAGAAGGAATCAACCTT...TGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGAACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATTACCCAATATCCTGGTTGACTaGAGATTGCCAGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: IIGTSLLLAVTGEMATLPNILVD*RLPVTS
Trigger: AGAAGTTACTGGCAATCTCAAGTCAACCAGGATATT...GGGTAATGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATAATATCCTGGTTGACTaGAGATTGCCAGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHNILVD*RLPVTS
Trigger: AGAAGTTACTGGCAATCTCAAGTCAACCAGGATATT...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TCAGTTTGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAAAACTGTTAGGTTCATaGCCTAGTTCCCAAGAAATG +
Preference number: 5 (lower is better)
Translates to: SVCRLTNTLSIPKGYSETKLLGS*PSSQEM
Trigger: CATTTCTTGGGAACTAGGCAATGAACCTAACAGTTT...TGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGTTTAGAAAATCTTCCTaGGTAGCAGTCCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: TGGCYPKGSNSGMENQILFRKSS*VAVRPF
Trigger: GAATGGACGGACTGCTACCAAGGAAGATTTTCTAAA...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTGCTCCAAAGAATACTaGCCTCATCACCACTTCTAT +
Preference number: 5 (lower is better)
Translates to: GAVILREVTQEWKTKYCMCSKEY*PHHHFY
Trigger: ATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCA...CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCTTGAACCTTGCACGCTaGCCATTAACACCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCLNLAR*PLTPWC
Trigger: GCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAA...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACATTGAACCTTGCACGCTaGCCATTAACACCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTLNLAR*PLTPWC
Trigger: GCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAA...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACAGAAGCTTCCTTCTCTTaGAACCTTGCACGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTEASFS*NLARLP
Trigger: TGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTTC...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GGCCTGTTTGAACGTCTAGTTATGTGGGAATATACATTTCCTTATTGCTTAAGCGAAGCTTCCTTCTCTTaGAACCTTGCACGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: GLFERLVMWEYTFPYCLSEASFS*NLARLP
Trigger: TGGCAAGCGTGCAAGGTTCAAAGAGAAGGAAGCTTC...GCTTAAGCAATAAGGAAATGTATATTCCCACATAACTAGACGTTCAAACAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GAGACAATTATAGGAACCTCGTTGTTGTTGGCAGTGACTGGTGAAATGGCCACATTGGATTGTCAGTGTTaGTGCAATGAAGGTATACTC +
Preference number: 5 (lower is better)
Translates to: ETIIGTSLLLAVTGEMATLDCQC*CNEGIL
Trigger: GAGTATACCTTCATTGCACAAACACTGACAATCCAA...TGTGGCCATTTCACCAGTCACTGCCAACAACAACGAGGTTCCTATAATTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCTTGGATTGTCAGTGTTaGTGCAATGAAGGTATACTC +
Preference number: 5 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTLDCQC*CNEGIL
Trigger: GAGTATACCTTCATTGCACAAACACTGACAATCCAA...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AGCTTAGCTGTAGGTACACAAGAACATACACAGTGGTATAAGGGATGTTGGAGAGGTAACCGCAAGTACTaGGTGACATTATGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SLAVGTQEHTQWYKGCWRGNRKY*VTLWRF
Trigger: AAACCTCCATAATGTCACCAAGTACTTGCGGTTACC...TCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ACTGGGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGTTAAATAAAGACTGGTaGTGGTGGCTAATCGCTGTC +
Preference number: 5 (lower is better)
Translates to: TGGCYPKGSNSGMENQILLNKDW*WWLIAV
Trigger: GACAGCGATTAGCCACCACAACCAGTCTTTATTTAA...CAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCATGGGGTTTCACCATGTaGGCCAGGCTGGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: VILREVTQEWKTKYCMFSWGFTM*ARLVSN
Trigger: ATTTGATACCAGCCTGGCCAACATGGTGAAACCCCA...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTGGAACCTCGTTGTTGTaGGCAGTGACTGGTGAAATG +
Preference number: 5 (lower is better)
Translates to: YPKGSNSGMENQILHVLTGTSLL*AVTGEM
Trigger: CATTTCACCAGTCACTGCCAACAACAACGAGGTTCC...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACAGGAACCTCGTTGTTGTaGGCAGTGACTGGTGAAATG +
Preference number: 5 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTGTSLL*AVTGEM
Trigger: CATTTCACCAGTCACTGCCAACAACAACGAGGTTCC...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAAATTAGGAAGTCTGTCTaGGTGCCACCAAACCTCAGG +
Preference number: 5 (lower is better)
Translates to: AVRSSEKELFKSMKETQKIRKSV*VPPNLR
Trigger: CCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAAT...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AGCTTAGCTGTAGGTACACAAGAACATACACAGTGGTATAAGGGATGTTGGAGAGGGATGGATCCATATTaGCAAATATCCTGGTTGACT +
Preference number: 5 (lower is better)
Translates to: SLAVGTQEHTQWYKGCWRGMDPY*QISWLT
Trigger: AGTCAACCAGGATATTTGCAAATATGGATCCATCCC...TCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AGCTTAGCTGTAGGTACACAAGAACATACACAGTGGTATAAGGGATGTTGGAGACTCCTTCTTTATACCTaGGATTGTCAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SLAVGTQEHTQWYKGCWRLLLYT*DCQCLC
Trigger: GCACAAACACTGACAATCCAAGGTATAAAGAAGGAG...TCTCCAACATCCCTTATACCACTGTGTATGTTCTTGTGTACCTACAGCTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ATGGCTCATTTTCTTCCTCTGGTTGCTATGAGGTTTGAAGGGGCCCATGAAACATTTAGAGTTAGACCATaGAGTTGGACAGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: MAHFLPLVAMRFEGAHETFRVRP*SWTDLE
Trigger: TTCCAAATCTGTCCAACTCAATGGTCTAACTCTAAA...TGTTTCATGGGCCCCTTCAAACCTCATAGCAACCAGAGGAAGAAAATGAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp CTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAGGAACCATGCAAGCAGCAACTTaGGCATTTCTTATCACAAAA +
Preference number: 5 (lower is better)
Translates to: LTNTLSIPKGYSETIIGTMQAAT*AFLITK
Trigger: TTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCAT...GGTTCCTATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp GTGAACTTCCTGGCCGGAGAGGTTTTTCCATTAAAGGTGGCAAGGTTTGATCATATGCAAGCAGCAACTTaGGCATTTCTTATCACAAAA +
Preference number: 5 (lower is better)
Translates to: VNFLAGEVFPLKVARFDHMQAAT*AFLITK
Trigger: TTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCAT...ATGATCAAACCTTGCCACCTTTAATGGAAAAACCTCTCCGGCCAGGAAGTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAATATTAGGAAGTCTGTCTaGGTGCCACCAAACCTCAGG +
Preference number: 5 (lower is better)
Translates to: HTELNLLLYTLDCQCLCNIRKSV*VPPNLR
Trigger: CCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAAT...ATTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTGGTTGACTTGAGATaGCCAGTAACTTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VILREVTQEWKTKYCMFSLVDLR*PVTSLF
Trigger: GAAGAGAGAAGTTACTGGCAATCTCAAGTCAACCAG...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCCTGGTTGACTTGAGATaGCCAGTAACTTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCLVDLR*PVTSLF
Trigger: GAAGAGAGAAGTTACTGGCAATCTCAAGTCAACCAG...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TGTAGACTGACCAACACCCTCTCCATTCCAAAGGGTTACTCAGAGACAATTATAAATATCCTGGTTGACTaGAGATTGCCAGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: CRLTNTLSIPKGYSETIINILVD*RLPVTS
Trigger: AGAAGTTACTGGCAATCTCAAGTCAACCAGGATATT...TATAATTGTCTCTGAGTAACCCTTTGGAATGGAGAGGGTGTTGGTCAGTCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATACTCCATATGCAGAGCTaGTTTCTCCTAACCAGACCT +
Preference number: 5 (lower is better)
Translates to: LREVTQEWKTKYCMFSLILHMQS*FLLTRP
Trigger: AGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAG...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTTGAACCTTGCACGCTaGCCATTAACACCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDLNLAR*PLTPWC
Trigger: GCACCAAGGTGTTAATGGCAAGCGTGCAAGGTTCAA...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp GGGGCTGTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTTAGAGTTAGACCATaGAGTTGGACAGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: GAVILREVTQEWKTKYCMFRVRP*SWTDLE
Trigger: TTCCAAATCTGTCCAACTCAATGGTCTAACTCTAAA...CATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAACAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATACCTAACTGCGACCCATaGATGAAAATATCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LREVTQEWKTKYCMFSLIPNCDP*MKISAF
Trigger: GAAGGCTGATATTTTCATCAATGGGTCGCAGTTAGG...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp GTTATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCATTTAGAAAATCTTCCTaGGTAGCAGTCCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: VILREVTQEWKTKYCMFSFRKSS*VAVRPF
Trigger: GAATGGACGGACTGCTACCAAGGAAGATTTTCTAAA...TGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTTTTAGAAAATCTTCCTaGGTAGCAGTCCGTCCATTC +
Preference number: 5 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACFRKSS*VAVRPF
Trigger: GAATGGACGGACTGCTACCAAGGAAGATTTTCTAAA...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATCTCCATATGCAGAGCTaGTTTCTCCTAACCAGACCT +
Preference number: 5 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDLHMQS*FLLTRP
Trigger: AGGTCTGGTTAGGAGAAACAAGCTCTGCATATGGAG...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTTGCTCCAAAGAATACTaGCCTCATCACCACTTCTAT +
Preference number: 5 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACCSKEY*PHHHFY
Trigger: ATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCA...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAGGTAACCGCAAGTACTaGGTGACATTATGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: LREVTQEWKTKYCMFSLIGNRKY*VTLWRF
Trigger: AAACCTCCATAATGTCACCAAGTACTTGCGGTTACC...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTAGGAGTTTCTGTTACTaGCAGCCAAAAGCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: REVTQEWKTKYCMFSLISRSFCY*QPKASQ
Trigger: TTGGGAAGCTTTTGGCTGCAAGTAACAGAAACTCCT...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTAAGGTTGATTCCTTCTaGGGATCGAAAATTAGGAAG +
Preference number: 5 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACKVDSF*GSKIRK
Trigger: CTTCCTAATTTTCGATCCCAAGAAGGAATCAACCTT...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp AAAGTAATCCATGAGGTCCCAAAGGTCTTAGAAGGTATTTATCCACTTGCTTGTAATATCCTGGTTGACTaGAGATTGCCAGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: KVIHEVPKVLEGIYPLACNILVD*RLPVTS
Trigger: AGAAGTTACTGGCAATCTCAAGTCAACCAGGATATT...ACAAGCAAGTGGATAAATACCTTCTAAGACCTTTGGGACCTCATGGATTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TATCCTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTAAACTGTTAGGTTCATaGCCTAGTTCCCAAGAAATG +
Preference number: 5 (lower is better)
Translates to: YPKGSNSGMENQILHVLTKLLGS*PSSQEM
Trigger: CATTTCTTGGGAACTAGGCAATGAACCTAACAGTTT...AGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp ATACTGCATGTTCTCACTTATAAGTGGAAGCTTAGCTGTAGGTACACAAGAACAAAACTGTTAGGTTCATaGCCTAGTTCCCAAGAAATG +
Preference number: 5 (lower is better)
Translates to: ILHVLTYKWKLSCRYTRTKLLGS*PSSQEM
Trigger: CATTTCTTGGGAACTAGGCAATGAACCTAACAGTTT...TGTTCTTGTGTACCTACAGCTAAGCTTCCACTTATAAGTGAGAACATGCAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTTGCTCCAAAGAATACTaGCCTCATCACCACTTCTAT +
Preference number: 5 (lower is better)
Translates to: REVTQEWKTKYCMFSLISCSKEY*PHHHFY
Trigger: ATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCA...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTGCTCCAAAGAATACTaGCCTCATCACCACTTCTAT +
Preference number: 5 (lower is better)
Translates to: RFMAYRVKSPSLYLGLSVCSKEY*PHHHFY
Trigger: ATAGAAGTGGTGATGAGGCAAGTATTCTTTGGAGCA...CACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507150.5
ENST00000508891.5
CDS-3UTR CAA 90 bp GCTGTGAGAAGCTCTGAAAAAGAGTTATTCAAGTCTATGAAGGAGACTCAAAAACTCCTTCTTTATACCTaGGATTGTCAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: AVRSSEKELFKSMKETQKLLLYT*DCQCLC
Trigger: GCACAAACACTGACAATCCAAGGTATAAAGAAGGAG...TTTTTGAGTCTCCTTCATAGACTTGAATAACTCTTTTTCAGAGCTTCTCACAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CTAAGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAAGGTTGATTCCTTCTaGGGATCGAAAATTAGGAAG +
Preference number: 5 (lower is better)
Translates to: LREVTQEWKTKYCMFSLIKVDSF*GSKIRK
Trigger: CTTCCTAATTTTCGATCCCAAGAAGGAATCAACCTT...TATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTAAGGTTGATTCCTTCTaGGGATCGAAAATTAGGAAG +
Preference number: 5 (lower is better)
Translates to: REVTQEWKTKYCMFSLISKVDSF*GSKIRK
Trigger: CTTCCTAATTTTCGATCCCAAGAAGGAATCAACCTT...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000681769.1
CDS-3UTR CAA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATGGGATGGATCCATATTaGCAAATATCCTGGTTGACT +
Preference number: 5 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDGMDPY*QISWLT
Trigger: AGTCAACCAGGATATTTGCAAATATGGATCCATCCC...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CATTATGGAGGTTTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATCTCCTTCTTTATACCTaGGATTGTCAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: HYGGLWHTELNLLLYTLDLLLYT*DCQCLC
Trigger: GCACAAACACTGACAATCCAAGGTATAAAGAAGGAG...ATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAAACCTCCATAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCTTTAGAGTTAGACCATaGAGTTGGACAGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: WHTELNLLLYTLDCQCLCFRVRP*SWTDLE
Trigger: TTCCAAATCTGTCCAACTCAATGGTCTAACTCTAAA...GCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp CATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAATAAACTGTTAGGTTCATaGCCTAGTTCCCAAGAAATG +
Preference number: 5 (lower is better)
Translates to: HTELNLLLYTLDCQCLCNKLLGS*PSSQEM
Trigger: CATTTCTTGGGAACTAGGCAATGAACCTAACAGTTT...ATTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509906.5
CDS-3UTR CAA 90 bp CATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTGCAATTTGGATTGTCAGTGTTaGTGCAATGAAGGTATACTC +
Preference number: 5 (lower is better)
Translates to: HTELNLLLYTLDCQCLCNLDCQC*CNEGIL
Trigger: GAGTATACCTTCATTGCACAAACACTGACAATCCAA...ATTGCACAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp AGGGAAGTAACTCAGGAATGGAAAACCAAATACTGCATGTTCTCACTTATAAGTTCCTCTCACATATTATaGCTGACAAAGAAAACCGAA +
Preference number: 5 (lower is better)
Translates to: REVTQEWKTKYCMFSLISSSHIL*LTKKTE
Trigger: TTCGGTTTTCTTTGTCAGCAATAATATGTGAGAGGA...ACTTATAAGTGAGAACATGCAGTATTTGGTTTTCCATTCCTGAGTTACTTCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311412.10
ENST00000405413.6
CDS-3UTR CAA 90 bp TTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGTTTAGAGTTAGACCATaGAGTTGGACAGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: LWHTELNLLLYTLDCQCLFRVRP*SWTDLE
Trigger: TTCCAAATCTGTCCAACTCAATGGTCTAACTCTAAA...CAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS-3UTR CAA 90 bp TTATGGCATACAGAGTTAAATCTCCTTCTTTATACCTTGGATTGTCAGTGTTTGATGCAAGCAGCAACTTaGGCATTTCTTATCACAAAA +
Preference number: 5 (lower is better)
Translates to: LWHTELNLLLYTLDCQCLMQAAT*AFLITK
Trigger: TTTTGTGATAAGAAATGCCAAAGTTGCTGCTTGCAT...CAAACACTGACAATCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
CDS GCA 72 bp CCCCCGCCAGGAAATCACCCACACCCACTTGAAGGGTaGGGAGATGGCCGGGATCCAAGCGCCCGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: PPPGNHPHPLEG*GDGRDPSAREA
Trigger: GGCCTCCCGGGCGCTTGGATCCCGGCCATCTCCGCACCCTTCAAGTGGGTGTGGGTGATTTCCTGGCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
CDS CAA 72 bp CTGGGTGAAGAAGTCCAGGTCCACGACGTCCTGTGCTaGCGCAGGTCGGGGCAGGGCGCCAGGGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: LGEEVQVHDVLC*RRSGQGARGEG
Trigger: CCCCTCTCCCCTGGCGCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGTGGACCTGGACTTCTTCACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS TCA 72 bp GGAACCGCGGGTCCGTGGCCAGGTTGGCGTCAATGGTaGCGGACAGGAACGAGGGGCTCACCAGGTGCAGCG +
Preference number: 6 (lower is better)
Translates to: GTAGPWPGWRQW*RTGTRGSPGAA
Trigger: CGCTGCACCTGGTGAGCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACCTGGCCACGGACCCGCGGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS GCA 72 bp CTCCTGGGTGAAGAAGTCCAGGTCCACGACGTCCTGTaGTTGCGCAGGTCGGGGCAGGGCGCCAGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: LLGEEVQVHDVL*LRRSGQGARGE
Trigger: CTCTCCCCTGGCGCCCTGCCCCGACCTGCGCAAGCACAGGACGTCGTGGACCTGGACTTCTTCACCCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS CAA 72 bp CCCAGGAGGATGAGGAACCGCGGGTCCGTGGCCAGGTaGGCGTCAATGGTGACGGACAGGAACGAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: PRRMRNRGSVAR*ASMVTDRNEGL
Trigger: GAGCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACCTGGCCACGGACCCGCGGTTCCTCATCCTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS TCA 72 bp GGAACGAGGGGCTCACCAGGTGCAGCGGCTCCTGGGTaGAGAAGTCCAGGTCCACGACGTCCTGTGCTTGCG +
Preference number: 6 (lower is better)
Translates to: GTRGSPGAAAPG*RSPGPRRPVLA
Trigger: CGCAAGCACAGGACGTCGTGGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTCGTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS CAA 90 bp TTTGGAGAACCCAGGAGGATGAGGAACCGCGGGTCCGTGGCCAGGTaGGCGTCAATGGTGACGGACAGGAACGAGGGGCTCACCAGGTGC +
Preference number: 6 (lower is better)
Translates to: FGEPRRMRNRGSVAR*ASMVTDRNEGLTRC
Trigger: GCACCTGGTGAGCCCCTCGTTCCTGTCCGTCACCATTGACGCCAACCTGGCCACGGACCCGCGGTTCCTCATCCTCCTGGGTTCTCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS GCA 72 bp TCAATGGTGACGGACAGGAACGAGGGGCTCACCAGGTaGAGCGGCTCCTGGGTGAAGAAGTCCAGGTCCACG +
Preference number: 6 (lower is better)
Translates to: SMVTDRNEGLTR*SGSWVKKSRST
Trigger: CGTGGACCTGGACTTCTTCACCCAGGAGCCGCTGCACCTGGTGAGCCCCTCGTTCCTGTCCGTCACCATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS GCA 72 bp CCTTCTTGGGATCGAAAATTAGGAAGTCTGTCTTGGTaGCACCAAACCTCAGGTACGCAGGAGACAAGCCTC +
Preference number: 6 (lower is better)
Translates to: PSWDRKLGSLSW*HQTSGTQETSL
Trigger: GAGGCTTGTCTCCTGCGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAATTTTCGATCCCAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS CAA 90 bp TCAAAGGTTGATTCCTTCTTGGGATCGAAAATTAGGAAGTCTGTCTaGGTGCCACCAAACCTCAGGTACGCAGGAGACAAGCCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: SKVDSFLGSKIRKSV*VPPNLRYAGDKPLA
Trigger: GGCCAGAGGCTTGTCTCCTGCGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAATTTTCGATCCCAAGAAGGAATCAACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS CCA 72 bp ATTCCTTCTTGGGATCGAAAATTAGGAAGTCTGTCTTaGTGCCACCAAACCTCAGGTACGCAGGAGACAAGC +
Preference number: 6 (lower is better)
Translates to: IPSWDRKLGSLS*CHQTSGTQETS
Trigger: GCTTGTCTCCTGCGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAATTTTCGATCCCAAGAAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS CAA 72 bp GATTCCTTCTTGGGATCGAAAATTAGGAAGTCTGTCTaGGTGCCACCAAACCTCAGGTACGCAGGAGACAAG +
Preference number: 6 (lower is better)
Translates to: DSFLGSKIRKSV*VPPNLRYAGDK
Trigger: CTTGTCTCCTGCGTACCTGAGGTTTGGTGGCACCAAGACAGACTTCCTAATTTTCGATCCCAAGAAGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000508891.5
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000680713.1
ENST00000681769.1
CDS TCA 72 bp CCACCAGCCTTCAGGAAGTTGAGTAGGTGCTGTTCTTaGACTTTTTCTGGTAGTGTTCTCGGAGTAGCAATT +
Preference number: 6 (lower is better)
Translates to: PPAFRKLSRCCS*TFSGSVLGVAI
Trigger: AATTGCTACTCCGAGAACACTACCAGAAAAAGTTCAAGAACAGCACCTACTCAACTTCCTGAAGGCTGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508891.5
CDS CCA 72 bp GTGCCCGAGTCCAACCTATTCAAATATCTTTGGGGCTaGAACATCTCTAGGGTGCCTTTCATTTCTTACTTG +
Preference number: 6 (lower is better)
Translates to: VPESNLFKYLWG*NISRVPFISYL
Trigger: CAAGTAAGAAATGAAAGGCACCCTAGAGATGTTCCAGCCCCAAAGATATTTGAATAGGTTGGACTCGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680713.1
CDS CAA 90 bp CTTCAGTATTTTCAGCTTTATACAACTTCCGTAGGACTTGCTAGATaGGTGCCCGAGTCCAACCTATTCAAATATCTTTGGGGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: LQYFQLYTTSVGLAR*VPESNLFKYLWGWN
Trigger: GTTCCAGCCCCAAAGATATTTGAATAGGTTGGACTCGGGCACCAATCTAGCAAGTCCTACGGAAGTTGTATAAAGCTGAAAATACTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680713.1
CDS TCA 72 bp CGCTTGCCATTAACACCTTGGTGCCCACCAATTTCTTaGACAGAAGAGATAGCCAATAATCCTGGAAAACTT +
Preference number: 6 (lower is better)
Translates to: RLPLTPWCPPIS*TEEIANNPGKL
Trigger: AAGTTTTCCAGGATTATTGGCTATCTCTTCTGTTCAAGAAATTGGTGGGCACCAAGGTGTTAATGGCAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512196.5
CDS CAA 72 bp CATTTAGGCCAAAGATCAAGTCCAGTCCTGAGCAGTTaGCAAAAGTGTATAGCACATCTACAGAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: HLGQRSSPVLSS*QKCIAHLQSFL
Trigger: CAAGAAGCTCTGTAGATGTGCTATACACTTTTGCAAACTGCTCAGGACTGGACTTGATCTTTGGCCTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000509906.5
ENST00000512196.5
ENST00000681769.1
CDS CAA 90 bp TTAATAACGCATTTAGGCCAAAGATCAAGTCCAGTCCTGAGCAGTTaGCAAAAGTGTATAGCACATCTACAGAGCTTCTTGAGTAGGTGC +
Preference number: 6 (lower is better)
Translates to: LITHLGQRSSPVLSS*QKCIAHLQSFLSRC
Trigger: GCACCTACTCAAGAAGCTCTGTAGATGTGCTATACACTTTTGCAAACTGCTCAGGACTGGACTTGATCTTTGGCCTAAATGCGTTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000507150.5
ENST00000509906.5
ENST00000512196.5
ENST00000681769.1
CDS CAA 72 bp TTTCAGCTTTATACAACTTCCGTAGGACTTGCTAGATaGGTGCCCGAGTCCAACCTATTCAAATATCTTTGG +
Preference number: 6 (lower is better)
Translates to: FQLYTTSVGLAR*VPESNLFKYLW
Trigger: CCAAAGATATTTGAATAGGTTGGACTCGGGCACCAATCTAGCAAGTCCTACGGAAGTTGTATAAAGCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680713.1
CDS TCA 72 bp GTGCCTTTCATTTCTTACTTGAGTAGGTGCTGTTCTTaGACTTTTTCTGGTAGTGTTCTCGGAGTAGCAATT +
Preference number: 6 (lower is better)
Translates to: VPFISYLSRCCS*TFSGSVLGVAI
Trigger: AATTGCTACTCCGAGAACACTACCAGAAAAAGTTCAAGAACAGCACCTACTCAAGTAAGAAATGAAAGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680713.1
CDS TCA 72 bp TTATTTCTGGGAGGGGGACGGACCTCAAGGTATGAATaGTGTTCATGTTTTGCCCTTTATATGTCTGTATTT +
Preference number: 6 (lower is better)
Translates to: LFLGGGRTSRYE*CSCFALYMSVF
Trigger: AAATACAGACATATAAAGGGCAAAACATGAACATCATTCATACCTTGAGGTCCGTCCCCCTCCCAGAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680713.1
CDS TCA 72 bp GCTGACCAACATCAGGACCATAGAGTTTTGCATTTTTaGAGGTGGACTTTCTTAGAAGTTTATGCAATTGAA +
Preference number: 6 (lower is better)
Translates to: ADQHQDHRVLHF*RWTFLEVYAIE
Trigger: TTCAATTGCATAAACTTCTAAGAAAGTCCACCTTCAAAAATGCAAAACTCTATGGTCCTGATGTTGGTCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311412.10
ENST00000405413.6
ENST00000509906.5
ENST00000512196.5
ENST00000513463.1
ENST00000681769.1