RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HPS4 (Homo sapiens)

Ensembl gene IDs: ENSG00000100099

Ensembl transcript IDs: ENST00000336873.9, ENST00000398145.7, ENST00000402105.7, ENST00000422379.2, ENST00000429411.5, ENST00000439453.5, ENST00000459918.1, ENST00000464362.5, ENST00000466781.5, ENST00000473782.1, ENST00000479064.5, ENST00000481910.1, ENST00000483631.1, ENST00000485842.5, ENST00000491142.1, ENST00000493455.6, ENST00000496385.5, ENST00000519774.5

Found 1573 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGC +
Preference number: 1 (lower is better)
Translates to: PDLPARAHWRNLPAA*EWSRPAHRSGTSLC
Trigger: GCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTaGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTT +
Preference number: 1 (lower is better)
Translates to: SAGSWANSLCIRLTA*RKRRSCGVATCGRF
Trigger: AAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp CGGTCCTTACCCAGCCACACTGAACCCAGGGAAGGAAAAGAGGGATaGGCCCACGTTACGCGCGCGCGCGCGCGCGCACACACACACACA +
Preference number: 1 (lower is better)
Translates to: RSLPSHTEPREGKEG*AHVTRARARAHTHT
Trigger: TGTGTGTGTGTGTGCGCGCGCGCGCGCGCGCGTAACGTGGGCGCATCCCTCTTTTCCTTCCCTGGGTTCAGTGTGGCTGGGTAAGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR GCA 90 bp GCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTaGAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACA +
Preference number: 1 (lower is better)
Translates to: AWEWSRPAHRSGTSL*SHTAYHHLVWGLNT
Trigger: TGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp AGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCA +
Preference number: 1 (lower is better)
Translates to: SALEKPTCGVGVESA*SQIRHLAVQSHRLP
Trigger: TGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTaGGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTC +
Preference number: 1 (lower is better)
Translates to: ERSGPPSKSALEKPT*GVGVESACSQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp TGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACAACAGGGGCTCCACCTGTGCAGGGC +
Preference number: 1 (lower is better)
Translates to: CSQRECEASAGRSAE*GLPSATTGAPPVQG
Trigger: GCCCTGCACAGGTGGAGCCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
3UTR CCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCAC +
Preference number: 1 (lower is better)
Translates to: LPARAHWRNLPAAWE*SRPAHRSGTSLCSH
Trigger: GTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp TTTCATAAAGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTaGCGGCCTGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCG +
Preference number: 1 (lower is better)
Translates to: FHKARAAGQIRYASG*RPGGSGDPAGWPPA
Trigger: CGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCTTTATGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp AGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGGCTCCACCTGTGCAGGGCAAGAGGC +
Preference number: 1 (lower is better)
Translates to: SENVRRALAGLQNAG*LQQQQGLHLCRARG
Trigger: GCCTCTTGCCCTGCACAGGTGGAGCCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
3UTR CCA 90 bp CTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTaGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCA +
Preference number: 1 (lower is better)
Translates to: LRVLLGRGSALGMGA*LLWPGWSSSCSWAP
Trigger: TGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp CTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGATTCATCCTCACGAGCCCCATGCAGG +
Preference number: 1 (lower is better)
Translates to: LPAAAPQPAGTAPAL*RSECRDSSSRAPCR
Trigger: CCTGCATGGGGCTCGTGAGGATGAATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp TCACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTaGAGGCGCCATCCTGAGGGTTTGGGAAGCCGGAGCTCCGTGCTG +
Preference number: 1 (lower is better)
Translates to: SPRASAASALLCRRG*RRHPEGLGSRSSVL
Trigger: CAGCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp TGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATaGTGGGTCAGCATCTCAGGAGCAGAGGGAGGGCGCAAGCTGCTG +
Preference number: 1 (lower is better)
Translates to: WLLWPGWSSSCSWAP*WVSISGAEGGRKLL
Trigger: CAGCAGCTTGCGCCCTCCCTCTGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp TGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACAACAGGGGCTCCACCCTATCCTCCA +
Preference number: 1 (lower is better)
Translates to: CSQRECEASAGRSAE*GLPSATTGAPPYPP
Trigger: TGGAGGATAGGGTGGAGCCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR GCA 90 bp GAACAGGACTTTCCCCTGAGCCAGAGAGGGCAGCGGGGCAATAGCTaGACTGGCGTGATGCATCCAACCCACACGTGGGCTCGGAAAGGG +
Preference number: 1 (lower is better)
Translates to: EQDFPLSQRGQRGNS*TGVMHPTHTWARKG
Trigger: CCCTTTCCGAGCCCACGTGTGGGTTGGATGCATCACGCCAGTGCAGCTATTGCCCCGCTGCCCTCTCTGGCTCAGGGGAAAGTCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CCA 90 bp CTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTGGCTGCTATaGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTGGGTC +
Preference number: 1 (lower is better)
Translates to: LLGRGSALGMGAWLL*PGWSSSCSWAPCWV
Trigger: GACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp ACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATaGGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTT +
Preference number: 1 (lower is better)
Translates to: TRACGSFWGEGLLWE*GLGCYGQDGLRAAL
Trigger: AAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp GGTGTCAGCCTGGAGCTGATTCCATCTGCAGAGGGGCCAGCACCCTaGCAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGCG +
Preference number: 1 (lower is better)
Translates to: GVSLELIPSAEGPAP*QFAEPELHSRPGAA
Trigger: CGCAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp TCCTCACGAGCCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGCCAGCACCCTGACAGTTTGCTGAGC +
Preference number: 1 (lower is better)
Translates to: SSRAPCRTLLVSAWS*FHLQRGQHPDSLLS
Trigger: GCTCAGCAAACTGTCAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp CTGGGAATGGGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGGGTCAGCATCTCAGGAGCAGAGGGA +
Preference number: 1 (lower is better)
Translates to: LGMGAWLLWPGWSSS*SWAPCWVSISGAEG
Trigger: TCCCTCTGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp GCTGAAGGCGCCATCCTGAGGGTTTGGGAAGCCGGAGCTCCGTGCTaGAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCA +
Preference number: 1 (lower is better)
Translates to: AEGAILRVWEAGAPC*RCQLLEICLLDGVA
Trigger: TGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp GAGGCTGAAGGCGCCATCCTGAGGGTTTGGGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTT +
Preference number: 1 (lower is better)
Translates to: EAEGAILRVWEAGAP*CRCQLLEICLLDGV
Trigger: AACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp CTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTaGGTCAGCATCTCAGGAGCAGAGGGAGGGCGCAAGCTGCTGATG +
Preference number: 1 (lower is better)
Translates to: LLWPGWSSSCSWAPC*VSISGAEGGRKLLM
Trigger: CATCAGCAGCTTGCGCCCTCCCTCTGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp GTCCTGGATCTAAGCGAGGCAATAACAAGGGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTGGCTGCTATGGC +
Preference number: 1 (lower is better)
Translates to: VLDLSEAITRACGSF*GEGLLWEWGLGCYG
Trigger: GCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGCCTCGCTTAGATCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp GGCCAAGAACCTCACCCCTGGCAGAGTTGTGCAGTCCTGCGGGCCTaGTGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCC +
Preference number: 1 (lower is better)
Translates to: GQEPHPWQSCAVLRA*CSPDHGQTSIRSPS
Trigger: GGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp GGCGTGATGCATCCAACCCACACGTGGGCTCGGAAAGGGGTGCTGTaGGTGCATTCCTCAGCCAGGACACAGGTTGCCAAACTGCACCTC +
Preference number: 1 (lower is better)
Translates to: GVMHPTHTWARKGVL*VHSSARTQVAKLHL
Trigger: GAGGTGCAGTTTGGCAACCTGTGTCCTGGCTGAGGAATGCACTCACAGCACCCCTTTCCGAGCCCACGTGTGGGTTGGATGCATCACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR GCA 90 bp AGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGGCTCCACCCTATCCTCCACTTTCCT +
Preference number: 1 (lower is better)
Translates to: SENVRRALAGLQNAG*LQQQQGLHPILHFP
Trigger: AGGAAAGTGGAGGATAGGGTGGAGCCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CCA 90 bp AGAGGGTCTGCTCTGGGAATGGGGGCTTGGCTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGGGCTCCATGCTGGGTCAGCATCTCA +
Preference number: 1 (lower is better)
Translates to: RGSALGMGAWLLWPG*SSSCSWAPCWVSIS
Trigger: TGAGATGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp CTGCTCGTGGAGGCTGCCTCATCCCTGGGCAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACT +
Preference number: 1 (lower is better)
Translates to: LLVEAASSLGSVSFR*TSSPFSEARLLWYT
Trigger: AGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp CCGGAGCTCCGTGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCTG +
Preference number: 1 (lower is better)
Translates to: PELRAAGASCWKYVS*MGLQQAYTAVEAFL
Trigger: CAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp GCAGTGAGTGTAGAGATTCATCCTCACGAGCCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCTGATTCCATCTGCAGAGGGGCCAGC +
Preference number: 1 (lower is better)
Translates to: AVSVEIHPHEPHAGL*WCQPGADSICRGAS
Trigger: GCTGGCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGATGAATCTCTACACTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp CTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGATGTGGGATCTaGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGGCGTTTTC +
Preference number: 1 (lower is better)
Translates to: LLPAIWTSFVRGCGI*GGPGHGFHMASGVF
Trigger: GAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCAGATCCCACATCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp ATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGG +
Preference number: 1 (lower is better)
Translates to: IRSPSCHLDKLRQGM*DLGWSRPWIPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCAGATCCCACATCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp CTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTaGACAAGCTTCGTCAGGGGATGTGGGATCTGGGGTGGTCCAGGC +
Preference number: 1 (lower is better)
Translates to: LQIMARQASVLLPAI*TSFVRGCGIWGGPG
Trigger: GCCTGGACCACCCCAGATCCCACATCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp GTGAGTGTAGAGATTCATCCTCACGAGCCCCATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGATTCCATCTGCAGAGGGGCCAGCACC +
Preference number: 1 (lower is better)
Translates to: VSVEIHPHEPHAGLC*CQPGADSICRGAST
Trigger: GGTGCTGGCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGATGAATCTCTACACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp CGAGTTCTTCTTGGAGAAAGACTAGTTCCTTCCCCAGGGAGGAGCTaGGGCCAAGAACCTCACCCCTGGCAGAGTTGTGCAGTCCTGCGG +
Preference number: 1 (lower is better)
Translates to: RVLLGERLVPSPGRS*GQEPHPWQSCAVLR
Trigger: CCGCAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTGGCCTCAGCTCCTCCCTGGGGAAGGAACTAGTCTTTCTCCAAGAAGAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp ATCCCTGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTaGAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTGCGCTGTC +
Preference number: 1 (lower is better)
Translates to: IPGQRLFQVDFQPIQ*SQAAVVHFLYGCAV
Trigger: GACAGCGCAGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp GCGGCAGGTTTGCCATCAGCAAGCTCTGAATGCGGTCGTAATGTGTaGAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCATCCCTGGGCA +
Preference number: 1 (lower is better)
Translates to: AAGLPSASSECGRNV*SCRCCSWRLPHPWA
Trigger: TGCCCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATTCAGAGCTTGCTGATGGCAAACCTGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp GGGCCACAGTTACCAAGCTTTAGAGATGACGGCTGCAGCTGCCAGTaGCCTGGGGCTCTGAGCAGAACCTCCACTGCAGAAACTAAGCAG +
Preference number: 1 (lower is better)
Translates to: GPQLPSFRDDGCSCQ*PGALSRTSTAETKQ
Trigger: CTGCTTAGTTTCTGCAGTGGAGGTTCTGCTCAGAGCCCCAGGGCACTGGCAGCTGCAGCCGTCATCTCTAAAGCTTGGTAACTGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR GCA 90 bp AATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: NAVVMCEVVGAARGG*LIPGQRLFQVDFQP
Trigger: GGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp CTGGCAGAGTTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCT +
Preference number: 1 (lower is better)
Translates to: LAELCSPAGLMLSRS*PDKHPFSFLPSGQA
Trigger: AGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp GTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGGAGTCCTGCTGGAGATGCTAGAGAC +
Preference number: 1 (lower is better)
Translates to: VAFSFRADVLPPFGW*WAEPSWSPAGDARD
Trigger: GTCTCTAGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp CCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTaGTCCCACCCTTTGGATGGTGCTGGGCTGAACCATCCTGGAGTC +
Preference number: 1 (lower is better)
Translates to: PWIPHGQWRFLSGQM*SHPLDGAGLNHPGV
Trigger: GACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp TCGGAAAGGGGTGCTGTGAGTGCATTCCTCAGCCAGGACACAGGTTaGCAAACTGCACCTCGAACTCCTGGGCCCAGTAAGGAAAGAGTC +
Preference number: 1 (lower is better)
Translates to: SERGAVSAFLSQDTG*QTAPRTPGPSKERV
Trigger: GACTCTTTCCTTACTGGGCCCAGGAGTTCGAGGTGCAGTTTGGCAACCTGTGTCCTGGCTGAGGAATGCACTCACAGCACCCCTTTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CCA 90 bp CCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGGATaGTGCTGGGCTGAACCATCCTGGAGTCCTGCTGGAGATGCTAGA +
Preference number: 1 (lower is better)
Translates to: PVAFSFRADVLPPFG*CWAEPSWSPAGDAR
Trigger: TCTAGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp ATGTGGGATCTGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGGATGGT +
Preference number: 1 (lower is better)
Translates to: MWDLGWSRPWIPHGQ*RFLSGQMCSHPLDG
Trigger: ACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCAGATCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp CTTTTCTGCCCTGAAGAGTCACTAGAATCTGTGGTCCTGGATCACTaGCAGTGGCACTCGGTGTCAACTAGGAGTCCAGGGTGGGCAGGC +
Preference number: 1 (lower is better)
Translates to: LFCPEESLESVVLDH*QWHSVSTRSPGWAG
Trigger: GCCTGCCCACCCTGGACTCCTAGTTGACACCGAGTGCCACTGTCAGTGATCCAGGACCACAGATTCTAGTGACTCTTCAGGGCAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR GCA 90 bp TGCACACTGCCTTCCCTTGGGAAACATGGCCATAAGAGGTTGTGGTaGCCATTCCAGCAAGAACATGCTGCTTGGCTGTCCGTCGCTTGG +
Preference number: 1 (lower is better)
Translates to: CTLPSLGKHGHKRLW*PFQQEHAAWLSVAW
Trigger: CCAAGCGACGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CCA 90 bp TCCTGCACACTGCCTTCCCTTGGGAAACATGGCCATAAGAGGTTGTaGTGCCCATTCCAGCAAGAACATGCTGCTTGGCTGTCCGTCGCT +
Preference number: 1 (lower is better)
Translates to: SCTLPSLGKHGHKRL*CPFQQEHAAWLSVA
Trigger: AGCGACGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CCA 90 bp GCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGGATGGTGCTaGGCTGAACCATCCTGGAGTCCTGCTGGAGATGCTAGAGACCTT +
Preference number: 1 (lower is better)
Translates to: AFSFRADVLPPFGWC*AEPSWSPAGDARDL
Trigger: AAGGTCTCTAGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 90 bp GATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAG +
Preference number: 1 (lower is better)
Translates to: DLSRVPTEFNQVVSV*CRFPAGTIRTSQQE
Trigger: CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp AAGCTTGTGGCACCAATTCAAGCTGGGATGGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGT +
Preference number: 1 (lower is better)
Translates to: KLVAPIQAGMEQQEI*NTSGSVWQRGSQAR
Trigger: ACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCCACAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp CAGATGGCTGGCACAGAGGAAGCCAAAACAGAGGCTTTTCTGCCCTaGAGAGTCACTAGAATCTGTGGTCCTGGATCACTGACAGTGGCA +
Preference number: 1 (lower is better)
Translates to: QMAGTEEAKTEAFLP*RVTRICGPGSLTVA
Trigger: TGCCACTGTCAGTGATCCAGGACCACAGATTCTAGTGACTCTTCAGGGCAGAAAAGCCTCTGTTTTGGCTTCCTCTGTGCCAGCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CCA 90 bp TTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTaGGAAGCTTGTTTCCTCTCTGTCCTGGATCTAAGCGAGGCAATA +
Preference number: 1 (lower is better)
Translates to: FHRPHQHPHPGLVPP*EACFLSVLDLSEAI
Trigger: TATTGCCTCGCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 90 bp CAGGAACACACAGCTGAGTGTCGCTCCCTTTCACGCAGCCACCACTaGAAAGCACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTA +
Preference number: 1 (lower is better)
Translates to: QEHTAECRSLSRSHH*KAQCFYPQTSCKLL
Trigger: TAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGAAAGGGAGCGACACTCAGCTGTGTGTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 90 bp CACTCATGCGACCTTTATCCTTACAGTTCACAGGTGGCAGATGGCTaGCACAGAGGAAGCCAAAACAGAGGCTTTTCTGCCCTGAAGAGT +
Preference number: 1 (lower is better)
Translates to: HSCDLYPYSSQVADG*HRGSQNRGFSALKS
Trigger: ACTCTTCAGGGCAGAAAAGCCTCTGTTTTGGCTTCCTCTGTGCCAGCCATCTGCCACCTGTGAACTGTAAGGATAAAGGTCGCATGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CCA 90 bp TCTGGCAGTCGCTGTTTGCCTTACCCTCTCCCAATCACAATCTCCTaGCACTTGACCGAGCAGTCTCACAATATGAAGTTAAGGAGGGTC +
Preference number: 1 (lower is better)
Translates to: SGSRCLPYPLPITIS*HLTEQSHNMKLRRV
Trigger: GACCCTCCTTAACTTCATATTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTGTGATTGGGAGAGGGTAAGGCAAACAGCGACTGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CCA 90 bp AATAACTCTCCTGAGGACGCCTCCACATCCTGCAAAAGGTCTTTCTaGCAGTCGCTGTTTGCCTTACCCTCTCCCAATCACAATCTCCTG +
Preference number: 1 (lower is better)
Translates to: NNSPEDASTSCKRSF*QSLFALPSPNHNLL
Trigger: CAGGAGATTGTGATTGGGAGAGGGTAAGGCAAACAGCGACTGCCAGAAAGACCTTTTGCAGGATGTGGAGGCGTCCTCAGGAGAGTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CCA 90 bp CACAACACAAATGACATTATAAAGTTGTCTTCGCTGGCCTGGTACTaGGGACCACTGGTCAAAGACAACGTGAGACATTGCGGGGACTTC +
Preference number: 1 (lower is better)
Translates to: HNTNDIIKLSSLAWY*GPLVKDNVRHCGDF
Trigger: GAAGTCCCCGCAATGTCTCACGTTGTCTTTGACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAACTTTATAATGTCATTTGTGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CCA 90 bp AATTTTCACAACACAAATGACATTATAAAGTTGTCTTCGCTGGCCTaGTACTGGGGACCACTGGTCAAAGACAACGTGAGACATTGCGGG +
Preference number: 1 (lower is better)
Translates to: NFHNTNDIIKLSSLA*YWGPLVKDNVRHCG
Trigger: CCCGCAATGTCTCACGTTGTCTTTGACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAACTTTATAATGTCATTTGTGTTGTGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR TCA 90 bp TGGCACTTGACCGAGCAGTCTCACAATATGAAGTTAAGGAGGGTCTaGAAGCAGGGATTTGACAGCATGCCTAAAATCATAGCTTTACCA +
Preference number: 1 (lower is better)
Translates to: WHLTEQSHNMKLRRV*KQGFDSMPKIIALP
Trigger: TGGTAAAGCTATGATTTTAGGCATGCTGTCAAATCCCTGCTTTCAGACCCTCCTTAACTTCATATTGTGAGACTGCTCGGTCAAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR TCA 90 bp TCCTTTATAAAGTACCCAGTCTCGGGTATGTCTTTATTAGAACCGTaGGAACGGACTAACACACCACTATTAATCACTCATGCGACCTTT +
Preference number: 1 (lower is better)
Translates to: SFIKYPVSGMSLLEP*ERTNTPLLITHATF
Trigger: AAAGGTCGCATGAGTGATTAATAGTGGTGTGTTAGTCCGTTCTCACGGTTCTAATAAAGACATACCCGAGACTGGGTACTTTATAAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR TCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTGCAGGACCTTGGCGGTaGGGGAGGGCGGGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPAGPWR*GRAGVG
Trigger: CCCAACTCCCGCCCTCCCTCACCGCCAAGGTCCTGC...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCTGCGGGGTGGCCACCTaGGGCAGGTTTGCCATCAGC +
Preference number: 2 (lower is better)
Translates to: WRKRRSCGVATCGRFAISCGVAT*GRFAIS
Trigger: GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCA...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGTCCGGCACCTCGCTGTaGAGTCACACCGCCTACCAC +
Preference number: 2 (lower is better)
Translates to: ALSPSSGSSASRDSTSPLSGTSL*SHTAYH
Trigger: GTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA...CAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 2 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGGCCGGAGCTCCGTGCTaGAGGTGCCAGCTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPAGAPC*RCQLLE
Trigger: TTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGC...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGCAGCTGGTGCTCCCTaGAGCAGCAGGCTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLAAGAP*SSRLQP
Trigger: AGGCTGCAGCCTGCTGCTCCAGGGAGCACCAGCTGC...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR TCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCTGGATGGTGCTGGGCTaGACCATCCTGGAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: WRKRRSCGVATCGRFAISWMVLG*TILESC
Trigger: GCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCA...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGGATGGTGCTGGGCTaGACCATCCTGGAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRWMVLG*TILESC
Trigger: GCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCA...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGCAGTCCTGCGGGCCTaGTGCTCTCCAGATCATGGC +
Preference number: 2 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLAVLRA*CSPDHG
Trigger: GCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGC...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGAGGGGCCAGCACCCTaGCAGTTTGCTGAGCCTGAA +
Preference number: 2 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAEGPAP*QFAEPE
Trigger: TTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTC...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTCCGGCACCTCGCTGTaGAGTCACACCGCCTACCAC +
Preference number: 2 (lower is better)
Translates to: PSKSALEKPTCGVGVESASGTSL*SHTAYH
Trigger: GTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGT +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEAARGG*LIPGQR
Trigger: ACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTEAGAP*CRCQLL
Trigger: CAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTC...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCALRQGM*DLGWSR
Trigger: CCTGGACCACCCCAGATCCCACATCCCCTGACGAAG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGTCCCCAGGGAGGAGCTaGGGCCAAGAACCTCACCCC +
Preference number: 2 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKSPGRS*GQEPHP
Trigger: GGGGTGAGGTTCTTGGCCTCAGCTCCTCCCTGGGGA...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGATCCGGCACCTCGCTGTaGAGTCACACCGCCTACCAC +
Preference number: 2 (lower is better)
Translates to: RTSQQERTGETYLRRGSGSGTSL*SHTAYH
Trigger: GTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 2 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGTGGGCAGGCTGTCCTaGACACTGCCTTCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEVGRLS*TLPSLG
Trigger: CCCAAGGGAAGGCAGTGTGCAGGACAGCCTGCCCAC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGG +
Preference number: 2 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRLQNAG*LQQQQG
Trigger: CCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGGAGCGCTGGCAGGTCTaGAGAATGCGGGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEERWQV*RMRAAF
Trigger: GAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTC...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGCACTTCCTCTATGGCTaGGCTGTCTCCCAGCAGCGG +
Preference number: 2 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLHFLYG*AVSQQR
Trigger: CCGCTGCTGGGAGACAGCGCAGCCATAGAGGAAGTG...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTCTCCTGGATGGGGTTaGAACAGGCGTACACAGCCG +
Preference number: 2 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRSPGWG*NRRTQP
Trigger: CGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGA...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: ALSPSSGSSASRDSTSPLTSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...CAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGCTGGGTCTGCCGACCTaGAGAACTAACCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVLGLPT*RTNPCP
Trigger: GGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAG...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCCTGGGTCTGCCGACCTaGAGAACTAACCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSLGLPT*RTNPCP
Trigger: GGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAG...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGGTCCTGTTGTCACTaGATTCTCAGGGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRWSCCH*ILRAQP
Trigger: GGGCTGAGCCCTGAGAATTCAGTGACAACAGGACCA...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTQVVSV*CRFPAG
Trigger: TCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: VGVESACSQIRHLAVQSHQVVSV*CRFPAG
Trigger: TCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYQVVSV*CRFPAG
Trigger: TCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCCCTGGAGCAGCAGGCTaGAGCCTGGCAGCCCTACAA +
Preference number: 2 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSPGAAG*SLAALQ
Trigger: TTGTAGGGCTGCCAGGCTGCAGCCTGCTGCTCCAGG...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCATCAGCTGCAGCTGGTaGTCCCTGGAGCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTISCSW*SLEQQA
Trigger: AGCCTGCTGCTCCAGGGAGCACCAGCTGCAGCTGAT...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGG +
Preference number: 2 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPPPFGW*WAEPSW
Trigger: CCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGCAATAACAAGGGCCTaGGGGTCCTTCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLAITRA*GSFWGE
Trigger: CTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGGGAGCTGATTCCATCTaGAGAGGGGCCAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRGADSI*RGASTL
Trigger: CAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCC...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYPHAGL*WCQPGA
Trigger: AGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGTCCTCACGAGCCCCATaGAGGACTCTGCTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPSSRAP*RTLLVS
Trigger: TGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGA...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGCTCCGTGCTGCAGGTaGCAGCTGCTGGAAATATGT +
Preference number: 2 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAAPCCR*QLLEIC
Trigger: ACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGC...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 2 (lower is better)
Translates to: VESACSQIRHLAVQSHRLPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGCCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 2 (lower is better)
Translates to: VGVESACSQIRHLAVQSHGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGTGGCTGTCCGTCGCTTaGCCCGTACTCTGGGGGCGC +
Preference number: 2 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQWLSVA*PVLWGR
Trigger: GCGCCCCCAGAGTACGGGCCAAGCGACGGACAGCCA...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDACGSF*GEGLLW
Trigger: CCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGC...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ATCCTCACGAGCCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCAGGCGATCCTGCGGGGTaGCCACCTGCGGCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: ILTSPMQDSAGVSLELIPGDPAG*PPAAGL
Trigger: CAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCC...TGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGATCAGGCTGACGGCCTaGAGGAAGCGGCGATCCTGC +
Preference number: 2 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVIRLTA*RKRRSC
Trigger: GCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGAT...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCGCCATCCTGAGGGTTTaGGAAGCCGGAGCTCCGTGC +
Preference number: 2 (lower is better)
Translates to: GAWLLWPGWSSSCSWAPCAILRV*EAGAPC
Trigger: GCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGC...GCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CAA 90 bp AATGGGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTaGGGCTCCATGCTGGGTCAGCATCTCAGGAGCAGAGGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: NGGLAAMARMVFELL*GSMLGQHLRSRGRA
Trigger: CGCCCTCCCTCTGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCGCAGGACCTTGGCGGTaGGGGAGGGCGGGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSAGPWR*GRAGVG
Trigger: CCCAACTCCCGCCCTCCCTCACCGCCAAGGTCCTGC...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCACTGAAGGCGCCATCCTaGGGGTTTGGGAAGCCGGAG +
Preference number: 2 (lower is better)
Translates to: TPCFSSFCFALPERLKAPLKAPS*GFGKPE
Trigger: CTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAG...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 2 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGTGGTCTCCGTGTGCTaGCGCTTCCCTGCAGGAACG +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLVVSVC*RFPAGT
Trigger: CGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCAC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACA +
Preference number: 2 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWGRSAE*GLPSAT
Trigger: TGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCC...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAAGAGTTGTGCAGTCCTaGGGGCCTGATGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: VESACSQIRHLAVQSHRLRVVQS*GPDALQ
Trigger: CTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCT...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCATGCAGTAAGGAGCCCTaGCATCTGGAACAGGCACAT +
Preference number: 2 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCACSKEP*HLEQAH
Trigger: ATGTGCCTGTTCCAGATGGCAGGGCTCCTTACTGCA...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGGAGGCGCTGAGAGATaGCTTGCAGTAAGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEGGAER*LAVRSP
Trigger: AGGGCTCCTTACTGCAAGGCATCTCTCAGCGCCTCC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTCTCCTGGATGGGGTTaGAACAGGCGTACACAGCCG +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWESPGWG*NRRTQP
Trigger: CGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGA...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGCCGCTCCATGTTCCTaGGGGGCATCCTCTCCCGTA +
Preference number: 2 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDAAPCS*GASSPV
Trigger: TACGGGAGAGGATGCCCCGCAGGAACATGGAGCGGC...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439453.5
3UTR-3UTR CCA 90 bp ATTCCTCAGCCAGGACACAGGTTGCCAAACTGCACCTCGAACTCCTGGGCCCAGCCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 2 (lower is better)
Translates to: IPQPGHRLPNCTSNSWAQPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...CTGGGCCCAGGAGTTCGAGGTGCAGTTTGGCAACCTGTGTCCTGGCTGAGGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCAAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: TPCFSSFCFALPERLKAPNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCCAGAATTCAACCAAGTaGTCTCCGTGTGCTGCCGCT +
Preference number: 2 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRQNSTK*SPCAAA
Trigger: AGCGGCAGCACACGGAGACCACTTGGTTGAATTCTG...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACATTGCGGGGACTTCCTaGAGCTGCAGCAACCACAGC +
Preference number: 2 (lower is better)
Translates to: VGVESACSQIRHLAVQSHIAGTS*SCSNHS
Trigger: GCTGTGGTTGCTGCAGCTCCAGGAAGTCCCCGCAAT...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGCAGCTGCCAGTGCCCTaGGGCTCTGAGCAGAACCTC +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLQLPVP*GSEQNL
Trigger: GAGGTTCTGCTCAGAGCCCCAGGGCACTGGCAGCTG...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGCAGGTGGCAGATGGCTaGCACAGAGGAAGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLQVADG*HRGSQN
Trigger: GTTTTGGCTTCCTCTGTGCCAGCCATCTGCCACCTG...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp ATCCTCACGAGCCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCAGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: ILTSPMQDSAGVSLELIPACGSF*GEGLLW
Trigger: CCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGC...TGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGTCCTGTTGTCACTaGATTCTCAGGGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEWSCCH*ILRAQP
Trigger: GGGCTGAGCCCTGAGAATTCAGTGACAACAGGACCA...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 2 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRSRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCTCCCCAGGGAGGAGCTaGGGCCAAGAACCTCACCCC +
Preference number: 2 (lower is better)
Translates to: ELHSRPGAAWLSQTPSTSSPGRS*GQEPHP
Trigger: GGGGTGAGGTTCTTGGCCTCAGCTCCTCCCTGGGGA...GGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCGAAGGCAAAATGACCTaGGGCCATTTCCACTTCCTG +
Preference number: 2 (lower is better)
Translates to: WRKRRSCGVATCGRFAISEGKMT*GHFHFL
Trigger: CAGGAAGTGGAAATGGCCTCAGGTCATTTTGCCTTC...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 2 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCATCCGTTCTCCTTCCTaGCATCTGGACAAGCTTCGT +
Preference number: 2 (lower is better)
Translates to: WRKRRSCGVATCGRFAISIRSPS*HLDKLR
Trigger: ACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGAT...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACTGCTCTTGGGCTCCATaGTGGGTCAGCATCTCAGGA +
Preference number: 2 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYCSWAP*WVSISG
Trigger: TCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCA...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGT +
Preference number: 2 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDAARGG*LIPGQR
Trigger: ACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGC...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCTGCGGGGTGGCCACCTaGGGCAGGTTTGCCATCAGC +
Preference number: 2 (lower is better)
Translates to: CCRCQLLEICLLDGVATGCGVAT*GRFAIS
Trigger: GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCA...GCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGGCAAATTCGCTATaGATCAGGCTGACGGCCTGG +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEWANSL*IRLTAW
Trigger: CCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCA...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: HPVLQQLLLCFAGEAEGATSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...GGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTATGGGCTGAACCATCCTaGAGTCCTGCTGGAGATGCT +
Preference number: 2 (lower is better)
Translates to: VESACSQIRHLAVQSHRLWAEPS*SPAGDA
Trigger: AGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCA...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCAAGAACCTCACCCCTaGCAGAGTTGTGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: VGVESACSQIRHLAVQSHQEPHP*QSCAVL
Trigger: CAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTG...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCCATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGAT +
Preference number: 2 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTHAGLC*CQPGAD
Trigger: ATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATG...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGT +
Preference number: 2 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRSVSFR*TSSPFS
Trigger: ACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCT...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGTGTAGGTGCTGCTCGTaGAGGCTGCCTCATCCCTGG +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLCRCCS*RLPHPW
Trigger: CCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACA...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACTGTAGGTGCTGCTCGTaGAGGCTGCCTCATCCCTGG +
Preference number: 2 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDCRCCS*RLPHPW
Trigger: CCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACA...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAGCAGGACCTTGGCGGTaGGGGAGGGCGGGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPAGPWR*GRAGVG
Trigger: CCCAACTCCCGCCCTCCCTCACCGCCAAGGTCCTGC...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCAGTCCTGCGGGCCTaGTGCTCTCCAGATCATGGC +
Preference number: 2 (lower is better)
Translates to: CGPDALQIMARQASVLLPAVLRA*CSPDHG
Trigger: GCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGC...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCGAGGGGCCAGCACCCTaGCAGTTTGCTGAGCCTGAA +
Preference number: 2 (lower is better)
Translates to: WAASLSGGLPAHSVKPGCEGPAP*QFAEPE
Trigger: TTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTC...GCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: WAASLSGGLPAHSVKPGCVSAWS*FHLQRG
Trigger: GCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACAC...GCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGACCTCCACTTTCCTTCTaGAGCACAATCCCCATGGTG +
Preference number: 2 (lower is better)
Translates to: RTSQQERTGETYLRRGSGPPLSF*STIPMV
Trigger: CACCATGGGGATTGTGCTTCAGAAGGAAAGTGGAGG...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCCAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 2 (lower is better)
Translates to: PSKSALEKPTCGVGVESAQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACA +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLGRSAE*GLPSAT
Trigger: TGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCCTTTATAGAGGATaGAGCCAGCGAGAATGTGAG +
Preference number: 2 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAVLYRG*SQRECE
Trigger: CTCACATTCTCGCTGGCTGCATCCTCTATAAAGGAC...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGACATTCGGGGGCAATaGCGCTCCATTAGGGTTCTG +
Preference number: 2 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSDIRGQ*RSIRVL
Trigger: CAGAACCCTAATGGAGCGGCATTGCCCCCGAATGTC...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429411.5
3UTR-3UTR GCA 90 bp CTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGCGGCGATCCTGCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGG +
Preference number: 2 (lower is better)
Translates to: LGKFAMHQADGLEEAAILPPFGW*WAEPSW
Trigger: CCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGG...CAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGCAGTAAGGAGCCCTaGCATCTGGAACAGGCACAT +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWECSKEP*HLEQAH
Trigger: ATGTGCCTGTTCCAGATGGCAGGGCTCCTTACTGCA...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCCCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: WAASLSGGLPAHSVKPGCPHAGL*WCQPGA
Trigger: AGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG...GCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCTGCGGCAGGTTTaGCATCAGCAAGCTCTGAAT +
Preference number: 2 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYHLRQV*HQQALN
Trigger: ATTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTG...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: SYLGTLAREEPAARPTCSEAGAP*CRCQLL
Trigger: CAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTC...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGATACTTACCATGTTCCTaGGGGGCATCCTCTCCCGTA +
Preference number: 2 (lower is better)
Translates to: RTSQQERTGETYLRRGSGYLPCS*GASSPV
Trigger: TACGGGAGAGGATGCCCCGCAGGAACATGGTAAGTA...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLTSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTTACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 2 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 2 (lower is better)
Translates to: VPAAGNMSPGWGCNRRTQPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...CTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGTTGTCTTCGCTGGCCTaGTACTGGGGACCACTGGTC +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLLSSLA*YWGPLV
Trigger: GACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAA...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp GCAATAACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGAGGGAGGGCGGGAGTTaGGTGCTGACAATCAGTCCT +
Preference number: 2 (lower is better)
Translates to: AITRACGSFWGEGLLWEWREGGS*VLTISP
Trigger: AGGACTGATTGTCAGCACCCAACTCCCGCCCTCCCT...CCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGCTCCATTAGGGTTCTaGTGGGTAACTCGATTCTTG +
Preference number: 2 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAAPLGF*WVTRFL
Trigger: CAAGAATCGAGTTACCCACCAGAACCCTAATGGAGC...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429411.5
3UTR-3UTR CCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTSTGNS*RLMASS
Trigger: AGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CAGAGGGGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGTGGTCCAGGCCATaGATTCCACATGGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: QRGQHPDSLLSLNCIPDQGWSRP*IPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCC...CTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTGGGTCAGCACTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: CYGQDGLRAALGLHAGSALRQGM*DLGWSR
Trigger: CCTGGACCACCCCAGATCCCACATCCCCTGACGAAG...TGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCCTCCTTCCTGCCATCTaGACAAGCTTCGTCAGGGGA +
Preference number: 2 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSLLPAI*TSFVRG
Trigger: TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAG...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCTCTTGGGCTCCATGCTaGGTCAGCATCTCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: HPVLQQLLLCFAGEAEGASWAPC*VSISGA
Trigger: TGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGA...GGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGGCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGGGTCTGCTCTGGGAATaGGGGCTTGGCTGCTATGGC +
Preference number: 2 (lower is better)
Translates to: VAFTDPINILIQALFPRGGLLWE*GLGCYG
Trigger: GCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACC...CCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCCTTGTTCCCCCGTaGGAAGCTTGTTTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSGLVPP*EACFLS
Trigger: AGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCC...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGGGTACACTTCCTCTATaGCTGCGCTGTCTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKGTLPL*LRCLPA
Trigger: TGCTGGGAGACAGCGCAGCCATAGAGGAAGTGTACC...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCTGACAGTCATTGGCGATCCTGCGGGGTaGCCACCTGCGGCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: WMGLQQAYTAVEAFLTVIGDPAG*PPAAGL
Trigger: CAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCC...AATGACTGTCAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGTTCCCAGTCACCTCCTaGGTGCAGTTCAGAGCAAGT +
Preference number: 2 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRFPVTS*VQFRAS
Trigger: ACTTGCTCTGAACTGCACCCAGGAGGTGACTGGGAA...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCTGGGTCTGCCGACCTaGAGAACTAACCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTILGLPT*RTNPCP
Trigger: GGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAG...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp AGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGCTGGGTCTGCCGACCTaGAGAACTAACCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SCWKYVSWMGLQQAYTAVLGLPT*RTNPCP
Trigger: GGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAG...CACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACTGGTCCTGTTGTCACTaGATTCTCAGGGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDWSCCH*ILRAQP
Trigger: GGGCTGAGCCCTGAGAATTCAGTGACAACAGGACCA...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTATCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 2 (lower is better)
Translates to: VESACSQIRHLAVQSHRLSRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp AGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTGAGGGCGCAAGCTGCTaGTGGCTGTGTCCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: RWTSSPFSEARLLWYTSSEGASC*WLCPQE
Trigger: CTCCTGAGGACACAGCCATCAGCAGCTTGCGCCCTC...AGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp CCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCGGAAAGGGGTGCTGTaGGTGCATTCCTCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: PHPGLVPPWEACFLSVLDRKGVL*VHSSAR
Trigger: CCTGGCTGAGGAATGCACTCACAGCACCCCTTTCCG...ATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR TCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAACAGGACTTTCCCCTaGGCCAGAGAGGGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSNRTFP*AREGSG
Trigger: CCCGCTGCCCTCTCTGGCTCAGGGGAAAGTCCTGTT...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 2 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGTGGTCTCCGTGTGCTaGCGCTTCCCTGCAGGAACG +
Preference number: 2 (lower is better)
Translates to: SCWKYVSWMGLQQAYTAVVVSVC*RFPAGT
Trigger: CGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCAC...CACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGACAACGTGAGACATTaGGGGGACTTCCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLDNVRH*GDFLEL
Trigger: CAGCTCCAGGAAGTCCCCGCAATGTCTCACGTTGTC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp GGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGG +
Preference number: 2 (lower is better)
Translates to: GAAWLSQTPSTSSSRPCSLQNAG*LQQQQG
Trigger: CCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG...GGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCGAGCGCTGGCAGGTCTaGAGAATGCGGGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIERWQV*RMRAAF
Trigger: GAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTC...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGCTTTCAGGGCAGATGTaGTCCCACCCTTTGGATGGT +
Preference number: 2 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKLSGQM*SHPLDG
Trigger: ACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAG...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCAGAGTTGTGCAGTCCTaGGGGCCTGATGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: WAASLSGGLPAHSVKPGCRVVQS*GPDALQ
Trigger: CTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCT...GCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGCTCAAGAGGCAACCATaGGCCTCACTACTTACCATG +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWELKRQP*ASLLTM
Trigger: CATGGTAAGTAGTGAGGCGCATGGTTGCCTCTTGAG...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGGGGCTCGGAAAGGGGTaGTGTGAGTGCATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQGLGKG*CECIPQ
Trigger: CTGAGGAATGCACTCACAGCACCCCTTTCCGAGCCC...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: RTSQQERTGETYLRRGSGGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCTACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 2 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCCCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 2 (lower is better)
Translates to: DPINILIQALFPRGKLVSPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...GGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCTGACGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 2 (lower is better)
Translates to: CLLDGVATGVHSRGGISDGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...GTCAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGCGGCGATCCTGCCCTTTGGATGGTGCTaGGCTGAACCATCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: LGKFAMHQADGLEEAAILPFGWC*AEPSWS
Trigger: ACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGG...CAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATGGGTGGTCCAGGCCATaGATTCCACATGGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: PHPGLVPPWEACFLSVLDGWSRP*IPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCC...ATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCCACTTCCTGAGCCTCTaGAATGTGGATTTCAGACAA +
Preference number: 2 (lower is better)
Translates to: WRKRRSCGVATCGRFAISHFLSL*NVDFRQ
Trigger: TTGTCTGAAATCCACATTCCAGAGGCTCAGGAAGTG...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGCGTGGCTCTTGGGCTCCATGCTaGGTCAGCATCTCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: HPDSLLSLNCIPDQGLRGSWAPC*VSISGA
Trigger: TGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGA...GCCACGCAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CAA 90 bp ACTAGGAGTCCAGGGTGGGCAGGCTGTCCTGCACACTGCCTTCCCTaGGGAAACATGGCCATAAGAGGTTGTGGTGCCCATTCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: TRSPGWAGCPAHCLP*GNMAIRGCGAHSSK
Trigger: CTTGCTGGAATGGGCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGCAGGACAGCCTGCCCACCCTGGACTCCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CAA 90 bp CATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTaGGATGGTGCTGGGCTGAACCATCCTGGAGTCCTGCTGGAGATG +
Preference number: 2 (lower is better)
Translates to: HGQWRFLSGQMCSHP*DGAGLNHPGVLLEM
Trigger: CATCTCCAGCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCTGGGTCTGCCGACCTaGAGAACTAACCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTALGLPT*RTNPCP
Trigger: GGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAG...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GGACAGCACCAGCCCTTTGACGCAGTGAGTGTAGAGATTCATCCTCACGAGCCCCCAGGAACACACAGCTaGGTGTCGCTCCCTTTCACG +
Preference number: 2 (lower is better)
Translates to: GQHQPFDAVSVEIHPHEPPGTHS*VSLPFT
Trigger: CGTGAAAGGGAGCGACACTCAGCTGTGTGTTCCTGG...GGGCTCGTGAGGATGAATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTCCAGGAACACACAGCTaGGTGTCGCTCCCTTTCACG +
Preference number: 2 (lower is better)
Translates to: CGPDALQIMARQASVLLPPGTHS*VSLPFT
Trigger: CGTGAAAGGGAGCGACACTCAGCTGTGTGTTCCTGG...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCGCCATTTCCACTTCCTaGGCCTCTGGAATGTGGATT +
Preference number: 2 (lower is better)
Translates to: GAWLLWPGWSSSCSWAPCAISTS*ASGMWI
Trigger: AATCCACATTCCAGAGGCTCAGGAAGTGGAAATGGC...GCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTGTAGGAAGGCAAAATaGCCTGAGGCCATTTCCACT +
Preference number: 2 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTCRKAK*PEAIST
Trigger: AGTGGAAATGGCCTCAGGTCATTTTGCCTTCCTACA...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: VPAAGNMSPGWGCNRRTQVSAWS*FHLQRG
Trigger: GCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACAC...CTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGAT +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLTAPAL*RSECRD
Trigger: ATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGT...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 2 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGAAGGAAAAGAGGGATaGGCCCACGTTACGCGCGCG +
Preference number: 2 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNEGKEG*AHVTRA
Trigger: CGCGCGCGTAACGTGGGCGCATCCCTCTTTTCCTTC...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGCCAGCAAGAACATGCTaGTTGGCTGTCCGTCGCTTG +
Preference number: 2 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQPARTC*LAVRRL
Trigger: CAAGCGACGGACAGCCAAGCAGCATGTTCTTGCTGG...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp TCAGTCCTTTATAGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACA +
Preference number: 2 (lower is better)
Translates to: SVLYRGCSQRECEASAGRGRSAE*GLPSAT
Trigger: TGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCC...CCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCTATAAAGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTCTCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: LCSPAGLMLSRSWPDKHPSLLLR*CSVKQD
Trigger: GTCCTGCTTCACCGAACAGCACCTCAGGAGCAGAGA...CGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCTGACAGAGTTGTGCAGTCCTaGGGGCCTGATGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: CLLDGVATGVHSRGGISDRVVQS*GPDALQ
Trigger: CTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCT...GTCAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCATCTGCAGAGGGTGCAGTAAGGAGCCCTaGCATCTGGAACAGGCACAT +
Preference number: 2 (lower is better)
Translates to: PHAGLCWCQPGADSICRGCSKEP*HLEQAH
Trigger: ATGTGCCTGTTCCAGATGGCAGGGCTCCTTACTGCA...CCCTCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTTCTGGGGAGAGGGTCTaGTCTGGGAATGGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: SYLGTLAREEPAARPTCSSGERV*SGNGGL
Trigger: CAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGA...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGGCTGCAGGTGCCAGCTaGTGGAAATATGTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQAAGAS*WKYVSW
Trigger: CCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGC...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGCAGCAGCTTCTGCTTTaGTTTGCCGGAGAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLQQLLL*FAGEAE
Trigger: TTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTG...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACCTGGCAGTCGCTGTTTaGCTTACCCTCTCCCAATCA +
Preference number: 2 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDLAVAV*LTLSQS
Trigger: TGATTGGGAGAGGGTAAGGCAAACAGCGACTGCCAG...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp GGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGGACGCCTCCACATCCTaGAAAAGGTCTTTCTGGCAG +
Preference number: 2 (lower is better)
Translates to: GQHPDSLLSLNCIPDQGLDASTS*KRSFWQ
Trigger: CTGCCAGAAAGACCTTTTGCAGGATGTGGAGGCGTC...CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCCAGCGGGGCAATAGCTaGACTGGCGTGATGCATCCA +
Preference number: 2 (lower is better)
Translates to: CCRCQLLEICLLDGVATGQRGNS*TGVMHP
Trigger: TGGATGCATCACGCCAGTGCAGCTATTGCCCCGCTG...GCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGACTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: RTSQQERTGETYLRRGSGLYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGTACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACTACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 2 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCATACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 2 (lower is better)
Translates to: TPCFSSFCFALPERLKAPYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGCTTACAGTTCACAGGTaGCAGATGGCTGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLLTVHR*QMAGTE
Trigger: CTCTGTGCCAGCCATCTGCCACCTGTGAACTGTAAG...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp GGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGTCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: GQHPDSLLSLNCIPDQGLSTGNS*RLMASS
Trigger: AGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA...CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp AGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTGGGTGGTCCAGGCCATaGATTCCACATGGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: RWTSSPFSEARLLWYTSSGWSRP*IPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCC...AGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: SYLGTLAREEPAARPTCSLRQGM*DLGWSR
Trigger: CCTGGACCACCCCAGATCCCACATCCCCTGACGAAG...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCTGGGAATGGGGGCTTaGCTGCTATGGCCAGGATGG +
Preference number: 2 (lower is better)
Translates to: VPAAGNMSPGWGCNRRTQLGMGA*LLWPGW
Trigger: CCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAG...CTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCTGGGAATGGGGGCTTaGCTGCTATGGCCAGGATGG +
Preference number: 2 (lower is better)
Translates to: SYLGTLAREEPAARPTCSLGMGA*LLWPGW
Trigger: CCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAG...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGT +
Preference number: 2 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKSVSFR*TSSPFS
Trigger: ACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCT...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGTGTAGGTGCTGCTCGTaGAGGCTGCCTCATCCCTGG +
Preference number: 2 (lower is better)
Translates to: VPAAGNMSPGWGCNRRTQCRCCS*RLPHPW
Trigger: CCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACA...CTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGAACATGCAGATGGCTTaGTTTCCTTCGCATAACTTG +
Preference number: 2 (lower is better)
Translates to: ALSPSSGSSASRDSTSPLNMQMA*FPSHNL
Trigger: CAAGTTATGCGAAGGAAACCAAGCCATCTGCATGTT...CAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR TCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp AACAGGGATAATCTGGACATTCGGGGGCAATGCCGCTCCTGGAATTGCAAAGCAGAGGGCGCAAGCTGCTaGTGGCTGTGTCCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: NRDNLDIRGQCRSWNCKAEGASC*WLCPQE
Trigger: CTCCTGAGGACACAGCCATCAGCAGCTTGCGCCCTC...TGCTTTGCAATTCCAGGAGCGGCATTGCCCCCGAATGTCCAGATTATCCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR TCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAACTTTGCCGGAGAGGCTaGAGGCGCCATCCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQLCRRG*RRHPEG
Trigger: ACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAG...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTGTGATACAGGTGGCTTaGTGTCTGACCAGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: GLGCYGQDGLRAALGLHAVIQVA*CLTRFH
Trigger: ATGGAACCTGGTCAGACATCAAGCCACCTGTATCAC...AGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 2 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAAGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 2 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AACAGGGATAATCTGGACATTCGGGGGCAATGCCGCTCCTGGAATTGCAAAGCAGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 2 (lower is better)
Translates to: NRDNLDIRGQCRSWNCKAVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...TGCTTTGCAATTCCAGGAGCGGCATTGCCCCCGAATGTCCAGATTATCCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp GTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGG +
Preference number: 2 (lower is better)
Translates to: VPAAGNMSPGWGCNRRTQLQNAG*LQQQQG
Trigger: CCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG...CTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGG +
Preference number: 2 (lower is better)
Translates to: LQIMARQASVLLPAIWTSPPFGW*WAEPSW
Trigger: CCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGG...GCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGGAGGCGCTGAGAGATaGCTTGCAGTAAGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: SCWKYVSWMGLQQAYTAVGGAER*LAVRSP
Trigger: AGGGCTCCTTACTGCAAGGCATCTCTCAGCGCCTCC...CACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGG +
Preference number: 2 (lower is better)
Translates to: FHRPHQHPHPGLVPPWEAGWSSS*SWAPCW
Trigger: CCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCC...AGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCATCCACTTCCTCTATGGCTaGGCTGTCTCCCAGCAGCGG +
Preference number: 2 (lower is better)
Translates to: NAVVMCEVVGAARGGCLIHFLYG*AVSQQR
Trigger: CCGCTGCTGGGAGACAGCGCAGCCATAGAGGAAGTG...GATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCGCTGCAGGTGCCAGCTaGTGGAAATATGTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: ELHSRPGAAWLSQTPSTSAAGAS*WKYVSW
Trigger: CCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGC...GGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGAAAGGGGTGCTGTGAGTaGATTCCTCAGCCAGGACAC +
Preference number: 2 (lower is better)
Translates to: ARQASVLLPAIWTSFVRGKGCCE*IPQPGH
Trigger: GTGTCCTGGCTGAGGAATGCACTCACAGCACCCCTT...TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTGAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LNCIPDQGLRGFHRPHQHTSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...ATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCATCTGCAGAGGGGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: PHAGLCWCQPGADSICRGGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...CCCTCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTACCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 2 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GGAGATGCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: GDARDLVICSTGNSWRLMNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...CATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTCCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 2 (lower is better)
Translates to: EICLLDGVATGVHSRGGIPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...AATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCAGGGAGGGCGGGAGTTaGGTGCTGACAATCAGTCCT +
Preference number: 2 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPREGGS*VLTISP
Trigger: AGGACTGATTGTCAGCACCCAACTCCCGCCCTCCCT...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCAAAACAGGGATAATCTaGACATTCGGGGGCAATGCC +
Preference number: 2 (lower is better)
Translates to: GAWLLWPGWSSSCSWAPCKTGII*TFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTT...GCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGATGTGGGATCTGGGGTaGTCCAGGCCATGGATTCCA +
Preference number: 2 (lower is better)
Translates to: AGNMSPGWGCNRRTQPWRMWDLG*SRPWIP
Trigger: TGGAATCCATGGCCTGGACCACCCCAGATCCCACAT...CCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCAATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTC +
Preference number: 2 (lower is better)
Translates to: TPCFSSFCFALPERLKAPMLSRS*PDKHPF
Trigger: GAACGGATGCTTGTCTGGCCATGATCTGGAGAGCAT...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAAGAACCTCACCCCTaGCAGAGTTGTGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDQEPHP*QSCAVL
Trigger: CAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTG...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCCTGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: SCGPDALQIMARQASVLLLLWPG*SSSCSW
Trigger: CCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAG...AAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCAAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGT +
Preference number: 2 (lower is better)
Translates to: TPCFSSFCFALPERLKAPSVSFR*TSSPFS
Trigger: ACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCT...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CAA 90 bp CTGTCCTGCACACTGCCTTCCCTTGGGAAACATGGCCATAAGAGGTaGTGGTGCCCATTCCAGCAAGAACATGCTGCTTGGCTGTCCGTC +
Preference number: 2 (lower is better)
Translates to: LSCTLPSLGKHGHKR*WCPFQQEHAAWLSV
Trigger: GACGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGCAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CAA 90 bp CGTGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCCGTGGAGGCATTTCTGACAGTCATT +
Preference number: 2 (lower is better)
Translates to: RAAGASCWKYVSWMG*QQAYTAVEAFLTVI
Trigger: AATGACTGTCAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCTCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 2 (lower is better)
Translates to: GAAWLSQTPSTSSSRPCSSRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...GGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGAT +
Preference number: 2 (lower is better)
Translates to: CCRCQLLEICLLDGVATGTAPAL*RSECRD
Trigger: ATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGT...GCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TGCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTTCGGGAGAGAAAGGTTaGAAAGCACTTTTACAAGAA +
Preference number: 2 (lower is better)
Translates to: CAVSQQRLLSQQGQHQPFSGEKG*KALLQE
Trigger: TTCTTGTAAAAGTGCTTTTCAACCTTTCTCTCCCGA...AAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp TGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCCAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 2 (lower is better)
Translates to: WGGPGHGFHMASGVFFQGQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...GCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCTAAGCGAGGCAATAACAAGCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: PVGSLFPLCPGSKRGNNKQVVSV*CRFPAG
Trigger: TCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG...CTTGTTATTGCCTCGCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTTCTCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: RWTSSPFSEARLLWYTSSSLLLR*CSVKQD
Trigger: GTCCTGCTTCACCGAACAGCACCTCAGGAGCAGAGA...AGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAACCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQPHAGL*WCQPGA
Trigger: AGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAGCCGGAGCTCCGTGCTaGAGGTGCCAGCTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRAGAPC*RCQLLE
Trigger: TTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGC...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGAGACATTCGGGGGCAATaGCGCTCCTGGAATTGCAAA +
Preference number: 2 (lower is better)
Translates to: ARQASVLLPAIWTSFVRGDIRGQ*RSWNCK
Trigger: TTTGCAATTCCAGGAGCGGCATTGCCCCCGAATGTC...TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 2 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 2 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 2 (lower is better)
Translates to: TKWSPCAAASLQERSGPPQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACCAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCACAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: TPCFSSFCFALPERLKAPQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTCAGAATTCAACCAAGTaGTCTCCGTGTGCTGCCGCT +
Preference number: 2 (lower is better)
Translates to: CGPDALQIMARQASVLLPQNSTK*SPCAAA
Trigger: AGCGGCAGCACACGGAGACCACTTGGTTGAATTCTG...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 2 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACGGCCATAAGAGGTTGTaGTGCCCATTCCAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDGHKRL*CPFQQE
Trigger: TTCTTGCTGGAATGGGCACCACAACCTCTTATGGCC...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp GCCTTACCCTCTCCCAATCACAATCTCCTGGCACTTGACCGAGCAGTCTCACAAAGGGAGGGCGGGAGTTaGGTGCTGACAATCAGTCCT +
Preference number: 2 (lower is better)
Translates to: ALPSPNHNLLALDRAVSQREGGS*VLTISP
Trigger: AGGACTGATTGTCAGCACCCAACTCCCGCCCTCCCT...TTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTGTGATTGGGAGAGGGTAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCTGGGCTGAACCATCCTaGAGTCCTGCTGGAGATGCT +
Preference number: 2 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSWAEPS*SPAGDA
Trigger: AGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCA...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACCCCTTTGGATGGTGCTaGGCTGAACCATCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNPFGWC*AEPSWS
Trigger: ACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGG...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGCACTTCCTGAGCCTCTaGAATGTGGATTTCAGACAA +
Preference number: 2 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKHFLSL*NVDFRQ
Trigger: TTGTCTGAAATCCACATTCCAGAGGCTCAGGAAGTG...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCTCTTCGAGCTGCTCTTaGGCTCCATGCTGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTASSSCS*APCWVS
Trigger: GCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGA...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACCATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGAT +
Preference number: 2 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNHAGLC*CQPGAD
Trigger: ATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATG...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ATCCTCACGAGCCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCATGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCG +
Preference number: 2 (lower is better)
Translates to: ILTSPMQDSAGVSLELIPWKYVS*MGLQQA
Trigger: CGCCTGTTGCAACCCCATCCAGGAGACATATTTCCA...TGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGTGCAAAAGGTCTTTCTaGCAGTCGCTGTTTGCCTTA +
Preference number: 2 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVCKRSF*QSLFAL
Trigger: TAAGGCAAACAGCGACTGCCAGAAAGACCTTTTGCA...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CAA 90 bp ACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTaGTTTCCTCTCTGTCCTGGATCTAAGCGAGGCAATAACAAGGGC +
Preference number: 2 (lower is better)
Translates to: TPSTSSSRPCSPVGS*FPLCPGSKRGNNKG
Trigger: GCCCTTGTTATTGCCTCGCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CAA 90 bp AGGACGCCTCCACATCCTGCAAAAGGTCTTTCTGGCAGTCGCTGTTaGCCTTACCCTCTCCCAATCACAATCTCCTGGCACTTGACCGAG +
Preference number: 2 (lower is better)
Translates to: RTPPHPAKGLSGSRC*PYPLPITISWHLTE
Trigger: CTCGGTCAAGTGCCAGGAGATTGTGATTGGGAGAGGGTAAGGCAAACAGCGACTGCCAGAAAGACCTTTTGCAGGATGTGGAGGCGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR TCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACGAGGCTTTTCTGCCCTaGAGAGTCACTAGAATCTGT +
Preference number: 2 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDEAFLP*RVTRIC
Trigger: ACAGATTCTAGTGACTCTTCAGGGCAGAAAAGCCTC...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR TCA 90 bp TGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTAGGAAGGCAAAATaGCCTGAGGCCATTTCCACT +
Preference number: 2 (lower is better)
Translates to: WAASLSGGLPAHSVKPGCCRKAK*PEAIST
Trigger: AGTGGAAATGGCCTCAGGTCATTTTGCCTTCCTACA...GCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp ATCCTCACGAGCCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCATGTAGGAAGGCAAAATaGCCTGAGGCCATTTCCACT +
Preference number: 2 (lower is better)
Translates to: ILTSPMQDSAGVSLELIPCRKAK*PEAIST
Trigger: AGTGGAAATGGCCTCAGGTCATTTTGCCTTCCTACA...TGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAGAGGGCGCAAGCTGCTaGTGGCTGTGTCCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: FHIIKACPHCGSKEDAPREGASC*WLCPQE
Trigger: CTCCTGAGGACACAGCCATCAGCAGCTTGCGCCCTC...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 2 (lower is better)
Translates to: PHPGLVPPWEACFLSVLDQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...ATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCTCCGGCACCTCGCTGTaGAGTCACACCGCCTACCAC +
Preference number: 2 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSSGTSL*SHTAYH
Trigger: GTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGTCCGGCACCTCGCTGTaGAGTCACACCGCCTACCAC +
Preference number: 2 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKSGTSL*SHTAYH
Trigger: GTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGGTGGTCTCCGTGTGCTaGCGCTTCCCTGCAGGAACG +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEVVSVC*RFPAGT
Trigger: CGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCAC...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGAGAAAGGGGCACACCTaGAAAGTGAAGTTTCAGGAC +
Preference number: 2 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQRKGHT*KVKFQD
Trigger: GTCCTGAAACTTCACTTTGCAGGTGTGCCCCTTTCT...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCGAGCGCTGGCAGGTCTaGAGAATGCGGGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSERWQV*RMRAAF
Trigger: GAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTC...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCTTGCTGAGCCTGAACTaGATTCCAGACCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTALLSLN*IPDQGL
Trigger: CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAA...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGGAGCTGATTCCATCTaGAGAGGGGCCAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKGADSI*RGASTL
Trigger: CAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCC...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 2 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 2 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAGAATTCAACCAAGTaGTCTCCGTGTGCTGCCGCT +
Preference number: 2 (lower is better)
Translates to: SYLGTLAREEPAARPTCSQNSTK*SPCAAA
Trigger: AGCGGCAGCACACGGAGACCACTTGGTTGAATTCTG...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 2 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCANTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCCTGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: SCGPDALQIMARQASVLLIPHGQ*RFLSGQ
Trigger: CTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT...AAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCGCCATGGATTCCACATaGCCAGTGGCGTTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: DPINILIQALFPRGKLVSAMDST*PVAFSF
Trigger: GAAAGAAAACGCCACTGGCCATGTGGAATCCATGGC...GGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCCTTACCCTCTCCCAATCACAATCTCCTGGCACTTGACCGAGCAGTCTCACAAATGTGGGATCTGGGGTaGTCCAGGCCATGGATTCCA +
Preference number: 2 (lower is better)
Translates to: ALPSPNHNLLALDRAVSQMWDLG*SRPWIP
Trigger: TGGAATCCATGGCCTGGACCACCCCAGATCCCACAT...TTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTGTGATTGGGAGAGGGTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTCTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: TSSPFSEARLLWYTSSMALLWPG*SSSCSW
Trigger: CCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAG...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAGGCTGCTGGAGGCGCTaGGAGATGCCTTGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRGCWRR*EMPCSK
Trigger: CTTACTGCAAGGCATCTCTCAGCGCCTCCAGCAGCC...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp AATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCATCACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGAT +
Preference number: 2 (lower is better)
Translates to: NAVVMCEVVGAARGGCLITAPAL*RSECRD
Trigger: ATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGT...GATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp AATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCATCGCACAATCCCCATGGTaGTACAGGTGGCTTGATGTC +
Preference number: 2 (lower is better)
Translates to: NAVVMCEVVGAARGGCLIAQSPW*YRWLDV
Trigger: GACATCAAGCCACCTGTATCACCATGGGGATTGTGC...GATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR TCA 90 bp CTGAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATCAATCTCCTGGCACTTaGCCGAGCAGTCTCACAATA +
Preference number: 2 (lower is better)
Translates to: LNCIPDQGLRGFHRPHQHQSPGT*PSSLTI
Trigger: TATTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTG...ATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGCATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGAAACAGAGGCTTTTCTaGCCTGAAGAGTCACTAGAA +
Preference number: 2 (lower is better)
Translates to: AREEPAARPTCSQRQRRLKQRLF*PEESLE
Trigger: TTCTAGTGACTCTTCAGGGCAGAAAAGCCTCTGTTT...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp GACGCAGTGAGTGTAGAGATTCATCCTCACGAGCCCCATGCAGGACTCTGCTGGGTCCTTTATAGAGGATaGAGCCAGCGAGAATGTGAG +
Preference number: 2 (lower is better)
Translates to: DAVSVEIHPHEPHAGLCWVLYRG*SQRECE
Trigger: CTCACATTCTCGCTGGCTGCATCCTCTATAAAGGAC...CCAGCAGAGTCCTGCATGGGGCTCGTGAGGATGAATCTCTACACTCACTGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACATCCGTTCTCCTTCCTaGCATCTGGACAAGCTTCGT +
Preference number: 2 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNIRSPS*HLDKLR
Trigger: ACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGAT...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCATGCTCTTGGGCTCCATaGTGGGTCAGCATCTCAGGA +
Preference number: 2 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPCSWAP*WVSISG
Trigger: TCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCA...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGATCTGGGGAGAGGGTCTaGTCTGGGAATGGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRSGERV*SGNGGL
Trigger: CAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGA...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCTCAGTGAAGCCAGGCTaGTGTGGTACACTTCCTCTA +
Preference number: 2 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSSVKPG*CGTLPL
Trigger: TAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGA...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAGCTCCGTGCTGCAGGTaGCAGCTGCTGGAAATATGT +
Preference number: 2 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPAPCCR*QLLEIC
Trigger: ACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGC...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGGACATTCGGGGGCAATaGCGCTCCATGTTCCTGCGG +
Preference number: 2 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKDIRGQ*RSMFLR
Trigger: CCGCAGGAACATGGAGCGGCATTGCCCCCGAATGTC...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439453.5
3UTR-3UTR CCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCACAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 2 (lower is better)
Translates to: TPCFSSFCFALPERLKAPQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 2 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 2 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGCCATTAGGGTTCTGGTaGGTAACTCGATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQPLGFW*VTRFLK
Trigger: CTTCAAGAATCGAGTTACCCACCAGAACCCTAATGG...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCATCCAACCCACACGTaGGCTCGGAAAGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEHPTHT*ARKGVL
Trigger: CAGCACCCCTTTCCGAGCCCACGTGTGGGTTGGATG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR TCA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: CGPDALQIMARQASVLLPEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCCAGGAACACACAGCTaGGTGTCGCTCCCTTTCACG +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEPGTHS*VSLPFT
Trigger: CGTGAAAGGGAGCGACACTCAGCTGTGTGTTCCTGG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCACTTACCCAGCCACACTaGACCCAGGGAAGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPLTQPH*TQGRKR
Trigger: TCTTTTCCTTCCCTGGGTTCAGTGTGGCTGGGTAAG...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp ACACCACTATTAATCACTCATGCGACCTTTATCCTTACAGTTCACAGGTGGCAGGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 2 (lower is better)
Translates to: TPLLITHATFILTVHRWQGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...CTGCCACCTGTGAACTGTAAGGATAAAGGTCGCATGAGTGATTAATAGTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCTTTAGAGATGACGGCTaGAGCTGCCAGTGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSFRDDG*SCQCPG
Trigger: CCCAGGGCACTGGCAGCTGCAGCCGTCATCTCTAAA...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGG +
Preference number: 2 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKGWSSS*SWAPCW
Trigger: CCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCC...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGTCCTCACGAGCCCCATaGAGGACTCTGCTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAESSRAP*RTLLVS
Trigger: TGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGA...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: SYLGTLAREEPAARPTCSLYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKTSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAETSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: SWPDKHPFSFLPSGQASSGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...TGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGTTGAGGGGATGGGCCTaGGGCTGTGGGATTAACCGT +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAELRGWA*GCGINR
Trigger: ACGGTTAATCCCACAGCCCCAGGCCCATCCCCTCAA...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTAAAACAGGGATAATCTaGACATTCGGGGGCAATGCC +
Preference number: 2 (lower is better)
Translates to: SYLGTLAREEPAARPTCSKTGII*TFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTT...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGTCTTCGAGCTGCTCTTaGGCTCCATGCTGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAESSSCS*APCWVS
Trigger: GCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGA...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CAA 90 bp GTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATAATCTGGACATTCGGGGGCAATGCC +
Preference number: 2 (lower is better)
Translates to: VICSTGNSWRLMASS*VTKTGIIWTFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGAACAGATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp CTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: LQIMARQASVLLPAIWTSEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...GCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 2 (lower is better)
Translates to: PHPGLVPPWEACFLSVLDHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...ATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCACAAATATTTTCATCCTaGAGTCTGTCTCATACTGTC +
Preference number: 2 (lower is better)
Translates to: TPCFSSFCFALPERLKAPQIFSS*SLSHTV
Trigger: GACAGTATGAGACAGACTGCAGGATGAAAATATTTG...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTACTTTCAGGGCAGATGTaGTCCCACCCTTTGGATGGT +
Preference number: 2 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLLSGQM*SHPLDG
Trigger: ACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAG...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAAAAACAGGGATAATCTaGACATTCGGGGGCAATGCC +
Preference number: 2 (lower is better)
Translates to: SWPDKHPFSFLPSGQASSKTGII*TFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTT...TGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTATCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLSTGNS*RLMASS
Trigger: AGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAAATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQIPHGQ*RFLSGQ
Trigger: CTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCTAAGCGAGGCAATAACAAGATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTC +
Preference number: 2 (lower is better)
Translates to: PVGSLFPLCPGSKRGNNKMLSRS*PDKHPF
Trigger: GAACGGATGCTTGTCTGGCCATGATCTGGAGAGCAT...CTTGTTATTGCCTCGCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGCAAGAACCTCACCCCTaGCAGAGTTGTGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKQEPHP*QSCAVL
Trigger: CAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTG...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CAA 90 bp TTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGTGC +
Preference number: 2 (lower is better)
Translates to: LRLAPIVGPKKTPLD*SRVPTEFNQVVSVC
Trigger: GCACACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp CATCAGCAAGCTCTGAATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTTCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 2 (lower is better)
Translates to: HQQALNAVVMCEVVGAARSRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...ACGAGCAGCACCTACAACTTCACACATTACGACCGCATTCAGAGCTTGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAACCGTGGAGGCATTTCTaGCAGTCATTTCATAAAGCG +
Preference number: 2 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQPWRHF*QSFHKA
Trigger: CGCTTTATGAAATGACTGTCAGAAATGCCTCCACGG...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GAAAACAGCGGGTTAAGTGTTTCTTCTCTGCAGCCTCTGGGCCACAGTTACCAACAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 2 (lower is better)
Translates to: ENSGLSVSSLQPLGHSYQQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...TTGGTAACTGTGGCCCAGAGGCTGCAGAGAAGAAACACTTAACCCGCTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR GCA 90 bp CCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCTAAGCGAGGCAATAACAAGGTCCTTTATAGAGGATaGAGCCAGCGAGAATGTGAG +
Preference number: 2 (lower is better)
Translates to: PVGSLFPLCPGSKRGNNKVLYRG*SQRECE
Trigger: CTCACATTCTCGCTGGCTGCATCCTCTATAAAGGAC...CTTGTTATTGCCTCGCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCATTTTCCATGTTCCTaGGGGGCATCCTCTCCCGTA +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEHFPCS*GASSPV
Trigger: TACGGGAGAGGATGCCCCGCAGGAACATGGAAAATG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429411.5
3UTR-3UTR GCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCCAGCAGCTTCTGCTTTaGTTTGCCGGAGAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSQQLLL*FAGEAE
Trigger: TTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTG...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCTGCTTCAGCAGCTTCTaGTTTGCTTTGCCGGAGAGG +
Preference number: 2 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSCFSSF*FALPER
Trigger: CCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCA...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp GCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGGCTTCCTCACTCGGGGAAATATaGCTCAGTTCCACATTCCTT +
Preference number: 2 (lower is better)
Translates to: ARDLVICSTGNSWRLMASSLGEI*LSSTFL
Trigger: AAGGAATGTGGAACTGAGGCATATTTCCCCGAGTGA...GGAAGCCATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGACAGAATTCAACCAAGTaGTCTCCGTGTGCTGCCGCT +
Preference number: 2 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRQNSTK*SPCAAA
Trigger: AGCGGCAGCACACGGAGACCACTTGGTTGAATTCTG...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCTGACAGTCATTCCATTAGGGTTCTGGTaGGTAACTCGATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: WMGLQQAYTAVEAFLTVIPLGFW*VTRFLK
Trigger: CTTCAAGAATCGAGTTACCCACCAGAACCCTAATGG...AATGACTGTCAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCTCCTTCCTGCCATCTaGACAAGCTTCGTCAGGGGA +
Preference number: 2 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNLLPAI*TSFVRG
Trigger: TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAG...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGTTCCCAGTCACCTCCTaGGTGCAGTTCAGAGCAAGT +
Preference number: 2 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKFPVTS*VQFRAS
Trigger: ACTTGCTCTGAACTGCACCCAGGAGGTGACTGGGAA...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR TCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCAATTGCAAAGCAATATaGACAGGACTTTCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTANCKAI*TGLSPE
Trigger: CTCAGGGGAAAGTCCTGTTCATATTGCTTTGCAATT...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR GCA 90 bp ATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGCATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 2 (lower is better)
Translates to: IPHGQWRFLSGQMCSHPLHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...CAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTACTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLLYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CATCAGCAAGCTCTGAATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTCTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: HQQALNAVVMCEVVGAARLYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...ACGAGCAGCACCTACAACTTCACACATTACGACCGCATTCAGAGCTTGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 2 (lower is better)
Translates to: LMLSRSWPDKHPFSFLPSQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...AGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTACAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CAGAGGGGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 2 (lower is better)
Translates to: QRGQHPDSLLSLNCIPDQNTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...CTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAAGGGAGACACAGGCTTaGTGTATTGGATCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRRETQA*CIGSAA
Trigger: TGCAGCTGATCCAATACACCAAGCCTGTGTCTCCCT...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSKSSSS*RKTSSF
Trigger: GAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTT...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR GCA 90 bp AGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTCAAATATTTTCATCCTaGAGTCTGTCTCATACTGTC +
Preference number: 2 (lower is better)
Translates to: RWTSSPFSEARLLWYTSSQIFSS*SLSHTV
Trigger: GACAGTATGAGACAGACTGCAGGATGAAAATATTTG...AGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAELYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 2 (lower is better)
Translates to: CCRCQLLEICLLDGVATGNTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...GCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 2 (lower is better)
Translates to: AGNMSPGWGCNRRTQPWRNTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...CCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGAGACAGCAGAGATCCTaGAGAGAGGTGATAGAAGAG +
Preference number: 2 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVRQQRS*REVIEE
Trigger: CTCTTCTATCACCTCTCTCCAGGATCTCTGCTGTCT...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp ATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: IPHGQWRFLSGQMCSHPLKSSSS*RKTSSF
Trigger: GAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTT...CAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCTGTACGGTTCCATTTTaGGTCAGTGGAAGAATTTTC +
Preference number: 2 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSCTVPF*VSGRIF
Trigger: GAAAATTCTTCCACTGACCCAAAATGGAACCGTACA...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREKSSSS*RKTSSF
Trigger: GAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTT...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 2 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSNTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 2 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAENTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCCGCCATCCTGAGGGTTaGGGAAGCCGGAGCTCCGTG +
Preference number: 3 (lower is better)
Translates to: WRKRRSCGVATCGRFAISRHPEG*GSRSSV
Trigger: CACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCG...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 72 bp GCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTaGCGGCCTGGAGGAAGCGGCGATCCTGCGGGGTGG +
Preference number: 3 (lower is better)
Translates to: ARAAGQIRYASG*RPGGSGDPAGW
Trigger: CCACCCCGCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp TGCATCAGGCTGACGGCCTGGAGGAAGCGGCGATCCTaGGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGC +
Preference number: 3 (lower is better)
Translates to: CIRLTAWRKRRS*GVATCGRFAIS
Trigger: GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACTTGGCTGTCCGTCGCTaGGCCCGTACTCTGGGGGCG +
Preference number: 3 (lower is better)
Translates to: VGVESACSQIRHLAVQSHLAVRR*ARTLGA
Trigger: CGCCCCCAGAGTACGGGCCAAGCGACGGACAGCCAA...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR GCA 72 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTaGAGTCACACCGCCTACCACCACCTGGTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: WSRPAHRSGTSL*SHTAYHHLVWG
Trigger: CCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 72 bp GCCAGAGAGGGCAGCGGGGCAATAGCTGCACTGGCGTaGTGCATCCAACCCACACGTGGGCTCGGAAAGGGG +
Preference number: 3 (lower is better)
Translates to: AREGSGAIAALA*CIQPTRGLGKG
Trigger: CCCCTTTCCGAGCCCACGTGTGGGTTGGATGCATCACGCCAGTGCAGCTATTGCCCCGCTGCCCTCTCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR GCA 72 bp GTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGGCTCCACCTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: VRRALAGLQNAG*LQQQQGLHLCR
Trigger: CCTGCACAGGTGGAGCCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
3UTR CCA 72 bp AGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTG +
Preference number: 3 (lower is better)
Translates to: RAHWRNLPAAWE*SRPAHRSGTSL
Trigger: CAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACC +
Preference number: 3 (lower is better)
Translates to: PARAHWRNLPAA*EWSRPAHRSGT
Trigger: GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp AGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTaGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGC +
Preference number: 3 (lower is better)
Translates to: SWANSLCIRLTA*RKRRSCGVATC
Trigger: GCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGCAAGAACATGCTGCTaGGCTGTCCGTCGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLARTCC*AVRRLA
Trigger: GGCCAAGCGACGGACAGCCAAGCAGCATGTTCTTGC...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CAA 90 bp ACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTGAGGGAGGGCGGGAGTaGGGTGCTGACAATCAGTCC +
Preference number: 3 (lower is better)
Translates to: TRACGSFWGEGLLWEWGLEGGRE*GADNQS
Trigger: GGACTGATTGTCAGCACCCAACTCCCGCCCTCCCTC...AAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACAGCCAGGACACAGGTaGCCAAACTGCACCTCGAAC +
Preference number: 3 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAQPGHR*PNCTSN
Trigger: GTTCGAGGTGCAGTTTGGCAACCTGTGTCCTGGCTG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR GCA 72 bp GAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTCGCTGTGCAGTCACAC +
Preference number: 3 (lower is better)
Translates to: EKPTCGVGVESA*SQIRHLAVQSH
Trigger: GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp GGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTaGGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATC +
Preference number: 3 (lower is better)
Translates to: GPPSKSALEKPT*GVGVESACSQI
Trigger: GATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp GTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGGCTCCACCCTATCCTC +
Preference number: 3 (lower is better)
Translates to: VRRALAGLQNAG*LQQQQGLHPIL
Trigger: GAGGATAGGGTGGAGCCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CAA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGCGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLRRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGGAGGGAGGGCGGGAGTaGGGTGCTGACAATCAGTCC +
Preference number: 3 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGEGGRE*GADNQS
Trigger: GGACTGATTGTCAGCACCCAACTCCCGCCCTCCCTC...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp ACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTATCCTCATCCAGGCCTaGTTCCCCCGTGGGAAGCTT +
Preference number: 3 (lower is better)
Translates to: TRACGSFWGEGLLWEWGLILIQA*FPRGKL
Trigger: AAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGAT...AAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCC +
Preference number: 3 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKVSWMG*QQAYTA
Trigger: GGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGAC...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 72 bp GCCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGCCAGCACCCTGACAGT +
Preference number: 3 (lower is better)
Translates to: APCRTLLVSAWS*FHLQRGQHPDS
Trigger: ACTGTCAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 72 bp TGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCATCCTaGGGGTTTGGGAAGCCGGAGCTCCGTGCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: CFALPERLKAPS*GFGKPELRAAG
Trigger: ACCTGCAGCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp AGGCGTGGGTTCCAGGCTGCTGGAGGCGCTGAGAGATaGCTTGCAGTAAGGAGCCCTGCCATCTGGAACAGG +
Preference number: 3 (lower is better)
Translates to: RRGFQAAGGAER*LAVRSPAIWNR
Trigger: CCTGTTCCAGATGGCAGGGCTCCTTACTGCAAGGCATCTCTCAGCGCCTCCAGCAGCCTGGAACCCACGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp GGCGCCATCCTGAGGGTTTGGGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTG +
Preference number: 3 (lower is better)
Translates to: GAILRVWEAGAP*CRCQLLEICLL
Trigger: CAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp TTTCCCCTGAGCCAGAGAGGGCAGCGGGGCAATAGCTaGACTGGCGTGATGCATCCAACCCACACGTGGGCT +
Preference number: 3 (lower is better)
Translates to: FPLSQRGQRGNS*TGVMHPTHTWA
Trigger: AGCCCACGTGTGGGTTGGATGCATCACGCCAGTGCAGCTATTGCCCCGCTGCCCTCTCTGGCTCAGGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CCA 72 bp AGGTTGTGGTGCCCATTCCAGCAAGAACATGCTGCTTaGCTGTCCGTCGCTTGGCCCGTACTCTGGGGGCGC +
Preference number: 3 (lower is better)
Translates to: RLWCPFQQEHAA*LSVAWPVLWGR
Trigger: GCGCCCCCAGAGTACGGGCCAAGCGACGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CCA 72 bp GCTCTGGGAATGGGGGCTTGGCTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGGGCTCCATGCTGGGTC +
Preference number: 3 (lower is better)
Translates to: ALGMGAWLLWPG*SSSCSWAPCWV
Trigger: GACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp TGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATaGGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGA +
Preference number: 3 (lower is better)
Translates to: CGSFWGEGLLWE*GLGCYGQDGLR
Trigger: TCGAAGACCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CTAAGCGAGGCAATAACAAGGGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: LSEAITRACGSF*GEGLLWEWGLG
Trigger: GCCAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGCCTCGCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 3 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCCGCCATCCTGAGGGTTaGGGAAGCCGGAGCTCCGTG +
Preference number: 3 (lower is better)
Translates to: ELHSRPGAAWLSQTPSTSRHPEG*GSRSSV
Trigger: CACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCG...GGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTCTGGCAGTCGCTGTTaGCCTTACCCTCTCCCAATC +
Preference number: 3 (lower is better)
Translates to: DPDLPARAHWRNLPAAWESGSRC*PYPLPI
Trigger: GATTGGGAGAGGGTAAGGCAAACAGCGACTGCCAGA...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR TCA 72 bp GCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTaGAGGCGCCATCCTGAGGGTTTGGGAAGCCGGAGC +
Preference number: 3 (lower is better)
Translates to: ASAASALLCRRG*RRHPEGLGSRS
Trigger: GCTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp GAGCTGAGGCCAAGAACCTCACCCCTGGCAGAGTTGTaGAGTCCTGCGGGCCTGATGCTCTCCAGATCATGG +
Preference number: 3 (lower is better)
Translates to: ELRPRTSPLAEL*SPAGLMLSRSW
Trigger: CCATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTGGCCTCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp GGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGGGTCAGCATCTCAGGA +
Preference number: 3 (lower is better)
Translates to: GAWLLWPGWSSS*SWAPCWVSISG
Trigger: TCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CTGGACAAGCTTCGTCAGGGGATGTGGGATCTGGGGTaGTCCAGGCCATGGATTCCACATGGCCAGTGGCGT +
Preference number: 3 (lower is better)
Translates to: LDKLRQGMWDLG*SRPWIPHGQWR
Trigger: ACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCAGATCCCACATCCCCTGACGAAGCTTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGTGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLCQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGATCCTCATCCAGGCCTaGTTCCCCCGTGGGAAGCTT +
Preference number: 3 (lower is better)
Translates to: GQHPDSLLSLNCIPDQGLILIQA*FPRGKL
Trigger: AAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGAT...CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACAGCACCCTGACAGTTaGCTGAGCCTGAACTGCATT +
Preference number: 3 (lower is better)
Translates to: VESACSQIRHLAVQSHRLQHPDS*LSLNCI
Trigger: AATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTG...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 72 bp GCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTaGACACACACACTCTGGGCTAGTGGACGATCAGGT +
Preference number: 3 (lower is better)
Translates to: AVTPPTTTWCGG*THTLWASGRSG
Trigger: ACCTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp AGGGGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTaGATTCCAGACCAGGGGCTGCGTGGCTTTCACAGA +
Preference number: 3 (lower is better)
Translates to: RGQHPDSLLSLN*IPDQGLRGFHR
Trigger: TCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp GCCATCCTGAGGGTTTGGGAAGCCGGAGCTCCGTGCTaGAGGTGCCAGCTGCTGGAAATATGTCTCCTGGAT +
Preference number: 3 (lower is better)
Translates to: AILRVWEAGAPC*RCQLLEICLLD
Trigger: ATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp AGAGGCAACCATGCGCCTCACTACTTACCATGTTCCTaGGGGGCATCCTCTCCCGTAGGGAGTCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: RGNHAPHYLPCS*GASSPVGSLCS
Trigger: GGAGCAGAGACTCCCTACGGGAGAGGATGCCCCGCAGGAACATGGTAAGTAGTGAGGCGCATGGTTGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR GCA 72 bp CAACCCACACGTGGGCTCGGAAAGGGGTGCTGTGAGTaGATTCCTCAGCCAGGACACAGGTTGCCAAACTGC +
Preference number: 3 (lower is better)
Translates to: QPTRGLGKGCCE*IPQPGHRLPNC
Trigger: GCAGTTTGGCAACCTGTGTCCTGGCTGAGGAATGCACTCACAGCACCCCTTTCCGAGCCCACGTGTGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CCA 72 bp CTGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCT +
Preference number: 3 (lower is better)
Translates to: LGWSRPWIPHGQ*RFLSGQMCSHP
Trigger: AGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp GCCATCTGGACAAGCTTCGTCAGGGGATGTGGGATCTaGGGTGGTCCAGGCCATGGATTCCACATGGCCAGT +
Preference number: 3 (lower is better)
Translates to: AIWTSFVRGCGI*GGPGHGFHMAS
Trigger: ACTGGCCATGTGGAATCCATGGCCTGGACCACCCCAGATCCCACATCCCCTGACGAAGCTTGTCCAGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp TGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTaGGCTCCATGCTGGGTCAGCATCTCAGGAGCAGAG +
Preference number: 3 (lower is better)
Translates to: WLLWPGWSSSCS*APCWVSISGAE
Trigger: CTCTGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CGTGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCGTACACAGCCGTGGAG +
Preference number: 3 (lower is better)
Translates to: RAAGASCWKYVS*MGLQQAYTAVE
Trigger: CTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGTGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWCQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACCGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDRRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGTGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVCQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 3 (lower is better)
Translates to: GQHPDSLLSLNCIPDQGLQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 72 bp TGGCCTGGTACTGGGGACCACTGGTCAAAGACAACGTaGGACATTGCGGGGACTTCCTGGAGCTGCAGCAAC +
Preference number: 3 (lower is better)
Translates to: WPGTGDHWSKTT*DIAGTSWSCSN
Trigger: GTTGCTGCAGCTCCAGGAAGTCCCCGCAATGTCTCACGTTGTCTTTGACCAGTGGTCCCCAGTACCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR TCA 72 bp CATCCAACCCACACGTGGGCTCGGAAAGGGGTGCTGTaGGTGCATTCCTCAGCCAGGACACAGGTTGCCAAA +
Preference number: 3 (lower is better)
Translates to: HPTHTWARKGVL*VHSSARTQVAK
Trigger: TTTGGCAACCTGTGTCCTGGCTGAGGAATGCACTCACAGCACCCCTTTCCGAGCCCACGTGTGGGTTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR TCA 72 bp CGGGGGCAATGCCGCTCCTGGAATTGCAAAGCAATATaGACAGGACTTTCCCCTGAGCCAGAGAGGGCAGCG +
Preference number: 3 (lower is better)
Translates to: RGQCRSWNCKAI*TGLSPEPERAA
Trigger: CGCTGCCCTCTCTGGCTCAGGGGAAAGTCCTGTTCATATTGCTTTGCAATTCCAGGAGCGGCATTGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR GCA 72 bp GTTCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTaGCGCTTCCCTGCAGGAACGATCCGGACCTCCCAG +
Preference number: 3 (lower is better)
Translates to: VPTEFNQVVSVC*RFPAGTIRTSQ
Trigger: CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp CCACAGTTACCAAGCTTTAGAGATGACGGCTGCAGCTaGCAGTGCCCTGGGGCTCTGAGCAGAACCTCCACT +
Preference number: 3 (lower is better)
Translates to: PQLPSFRDDGCS*QCPGALSRTST
Trigger: AGTGGAGGTTCTGCTCAGAGCCCCAGGGCACTGGCAGCTGCAGCCGTCATCTCTAAAGCTTGGTAACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR GCA 72 bp TCTGTCCTGGATCTAAGCGAGGCAATAACAAGGGCCTaGGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: SVLDLSEAITRA*GSFWGEGLLWE
Trigger: TTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGCCTCGCTTAGATCCAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp TTTGGGAAGCCGGAGCTCCGTGCTGCAGGTGCCAGCTaGTGGAAATATGTCTCCTGGATGGGGTTGCAACAG +
Preference number: 3 (lower is better)
Translates to: FGKPELRAAGAS*WKYVSWMGLQQ
Trigger: CTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp GTTCAGAGCAAGTTCACCCCGTGCTTCAGCAGCTTCTaGTTTGCTTTGCCGGAGAGGCTGAAGGCGCCATCC +
Preference number: 3 (lower is better)
Translates to: VQSKFTPCFSSF*FALPERLKAPS
Trigger: GGATGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGTGAACTTGCTCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp GGTGCTGTGAGTGCATTCCTCAGCCAGGACACAGGTTaGCAAACTGCACCTCGAACTCCTGGGCCCAGTAAG +
Preference number: 3 (lower is better)
Translates to: GAVSAFLSQDTG*QTAPRTPGPSK
Trigger: CTTACTGGGCCCAGGAGTTCGAGGTGCAGTTTGGCAACCTGTGTCCTGGCTGAGGAATGCACTCACAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CCA 72 bp GTGGGATCTGGGGTGGTCCAGGCCATGGATTCCACATaGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTC +
Preference number: 3 (lower is better)
Translates to: VGSGVVQAMDST*PVAFSFRADVL
Trigger: GAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCAGATCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGGCCATGGATTCCACAT +
Preference number: 3 (lower is better)
Translates to: PSCHLDKLRQGM*DLGWSRPWIPH
Trigger: ATGTGGAATCCATGGCCTGGACCACCCCAGATCCCACATCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp GAGATTCATCCTCACGAGCCCCATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGATTCCATCTGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: EIHPHEPHAGLC*CQPGADSICRG
Trigger: CCCTCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGATGAATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATaGGGTTGCAACAGGCGTACACAGCCGTGGAGGCAT +
Preference number: 3 (lower is better)
Translates to: LQVPAAGNMSPG*GCNRRTQPWRH
Trigger: ATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 3 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 3 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCCTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATA +
Preference number: 3 (lower is better)
Translates to: PSKSALEKPTCGVGVESALMASS*VTKTGI
Trigger: TATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAG...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GTGGCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGGAGATGCTAGAGACCTaGTCATCTGTTCCACCGGGA +
Preference number: 3 (lower is better)
Translates to: VAFTDPINILIQALFPRGEMLET*SSVPPG
Trigger: TCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTC...CCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp AGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGAACGATCCGGACCTCC +
Preference number: 3 (lower is better)
Translates to: RVPTEFNQVVSV*CRFPAGTIRTS
Trigger: GGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp TCTTTCAGGGCAGATGTGCTCCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGGAGTCCTGCTGGAGAT +
Preference number: 3 (lower is better)
Translates to: SFRADVLPPFGW*WAEPSWSPAGD
Trigger: ATCTCCAGCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp CCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTaGTCCCACCCTTTGGATGGTGCTGGGCTGAACCAT +
Preference number: 3 (lower is better)
Translates to: PHGQWRFLSGQM*SHPLDGAGLNH
Trigger: ATGGTTCAGCCCAGCACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp GTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGTCTCTTTCAGGTGGAC +
Preference number: 3 (lower is better)
Translates to: VMCEVVGAARGG*LIPGQRLFQVD
Trigger: GTCCACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp ATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTaGACAAGCTTCGTCAGGGGATGTGGGATCTGGGGT +
Preference number: 3 (lower is better)
Translates to: MARQASVLLPAI*TSFVRGCGIWG
Trigger: ACCCCAGATCCCACATCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp TTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCT +
Preference number: 3 (lower is better)
Translates to: LCSPAGLMLSRS*PDKHPFSFLPS
Trigger: AGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GCCATAAGAGGTTGTGGTGCCCATTCCAGCAAGAACATGCTGCTTGGCTGTCCGGAGGGAGACACAGGCTaGGTGTATTGGATCAGCTGC +
Preference number: 3 (lower is better)
Translates to: AIRGCGAHSSKNMLLGCPEGDTG*VYWISC
Trigger: GCAGCTGATCCAATACACCAAGCCTGTGTCTCCCTC...CGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CAA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGGTGATACAGGTGGCTaGATGTCTGACCAGGTTCCA +
Preference number: 3 (lower is better)
Translates to: CGPDALQIMARQASVLLPGDTGG*MSDQVP
Trigger: TGGAACCTGGTCAGACATCAAGCCACCTGTATCACC...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR GCA 72 bp GTAGAGATTCATCCTCACGAGCCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCTGATTCCATCTGCAGA +
Preference number: 3 (lower is better)
Translates to: VEIHPHEPHAGL*WCQPGADSICR
Trigger: TCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGATGAATCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR GCA 72 bp CTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTaGAGTTCAGAGCAAGTTCACCCCGTGCTTCAGCAG +
Preference number: 3 (lower is better)
Translates to: LCWFSPSQSPPG*SSEQVHPVLQQ
Trigger: CTGCTGAAGCACGGGGTGAACTTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTaGGAAGCTTGTTTCCTCTCTGTCCTGGATCTAAGC +
Preference number: 3 (lower is better)
Translates to: PHQHPHPGLVPP*EACFLSVLDLS
Trigger: GCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: DPINILIQALFPRGKLVSCQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...GGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp ATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGCGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: IPHGQWRFLSGQMCSHPLRRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...CAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACCATGGCCATAAGAGGTaGTGGTGCCCATTCCAGCAA +
Preference number: 3 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNHGHKR*WCPFQQ
Trigger: TTGCTGGAATGGGCACCACAACCTCTTATGGCCATG...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CAA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGTGGGTAACTCGATTCTaGAAGCTCCATAACATCCAT +
Preference number: 3 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVWVTRF*KLHNIH
Trigger: ATGGATGTTATGGAGCTTCAAGAATCGAGTTACCCA...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGTCTGAAAGCAGGGATTaGACAGCATGCCTAAAATCA +
Preference number: 3 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKSESRD*TACLKS
Trigger: TGATTTTAGGCATGCTGTCAAATCCCTGCTTTCAGA...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR GCA 72 bp CCTTCCCTTGGGAAACATGGCCATAAGAGGTTGTGGTaGCCATTCCAGCAAGAACATGCTGCTTGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: PSLGKHGHKRLW*PFQQEHAAWLS
Trigger: GGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CCA 72 bp CTGCCTTCCCTTGGGAAACATGGCCATAAGAGGTTGTaGTGCCCATTCCAGCAAGAACATGCTGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: LPSLGKHGHKRL*CPFQQEHAAWL
Trigger: CAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CAA 90 bp ATTCCTCAGCCAGGACACAGGTTGCCAAACTGCACCTCGAACTCCTGGGCCCAGAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 3 (lower is better)
Translates to: IPQPGHRLPNCTSNSWAQKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...CTGGGCCCAGGAGTTCGAGGTGCAGTTTGGCAACCTGTGTCCTGGCTGAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CAA 90 bp GGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTTGGGTAACTCGATTCTaGAAGCTCCATAACATCCAT +
Preference number: 3 (lower is better)
Translates to: GLGCYGQDGLRAALGLHAWVTRF*KLHNIH
Trigger: ATGGATGTTATGGAGCTTCAAGAATCGAGTTACCCA...AGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
3UTR TCA 72 bp ACAGCTGAGTGTCGCTCCCTTTCACGCAGCCACCACTaGAAAGCACAGTGCTTTTACCCCCAGACATCTTGT +
Preference number: 3 (lower is better)
Translates to: TAECRSLSRSHH*KAQCFYPQTSC
Trigger: ACAAGATGTCTGGGGGTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGAAAGGGAGCGACACTCAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR TCA 72 bp TTGCCATCAGCAAGCTCTGAATGCGGTCGTAATGTGTaGAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCAT +
Preference number: 3 (lower is better)
Translates to: LPSASSECGRNV*SCRCCSWRLPH
Trigger: ATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATTCAGAGCTTGCTGATGGCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTTGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: TSSPFSEARLLWYTSSMACQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAACAGCACCCTGACAGTTaGCTGAGCCTGAACTGCATT +
Preference number: 3 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQQHPDS*LSLNCI
Trigger: AATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTG...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAERRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 3 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTAKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 3 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 3 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 3 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTCTAGCCCTTGGAAGCTaGTTTCAAGAAAAAGACACC +
Preference number: 3 (lower is better)
Translates to: TSSPFSEARLLWYTSSMALALGS*FQEKDT
Trigger: GGTGTCTTTTTCTTGAAACAAGCTTCCAAGGGCTAG...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATA +
Preference number: 3 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTILMASS*VTKTGI
Trigger: TATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAG...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: HYRLNTVLYQVL*VCRPEELTPAP
Trigger: GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAACAATCTCCTGGCACTaGACCGAGCAGTCTCACAAT +
Preference number: 3 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRTISWH*TEQSHN
Trigger: ATTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTGT...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR GCA 72 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGA +
Preference number: 3 (lower is better)
Translates to: SKAQTPFHIIKA*PHCGSKEDAPR
Trigger: TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CAACTTGGAAGCTTGTGGCACCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAAATACCTCAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: QLGSLWHQFKLG*NSRRYEIPQAQ
Trigger: CTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp GCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCTTTGGTCACAAAAACA +
Preference number: 3 (lower is better)
Translates to: ARDLVICSTGNS*RLMASSLVTKT
Trigger: TGTTTTTGTGACCAAAGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp TCTGGAATGTGGATTTCAGACAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTCCCCAGGGAGGAGCTG +
Preference number: 3 (lower is better)
Translates to: SGMWISDKSSSS*RKTSSFPREEL
Trigger: CAGCTCCTCCCTGGGGAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTTGTCTGAAATCCACATTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp CGCTGTTTGCCTTACCCTCTCCCAATCACAATCTCCTaGCACTTGACCGAGCAGTCTCACAATATGAAGTTA +
Preference number: 3 (lower is better)
Translates to: RCLPYPLPITIS*HLTEQSHNMKL
Trigger: TAACTTCATATTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTGTGATTGGGAGAGGGTAAGGCAAACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR-3UTR CAA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACTGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNCQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCTTGTACGGTTCCATTTaGGGTCAGTGGAAGAATTTT +
Preference number: 3 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTALYGSI*GQWKNF
Trigger: AAAATTCTTCCACTGACCCAAAATGGAACCGTACAA...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CAA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 3 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR-3UTR CAA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCCTAGCCCTTGGAAGCTaGTTTCAAGAAAAAGACACC +
Preference number: 3 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSLALGS*FQEKDT
Trigger: GGTGTCTTTTTCTTGAAACAAGCTTCCAAGGGCTAG...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp AATGACATTATAAAGTTGTCTTCGCTGGCCTGGTACTaGGGACCACTGGTCAAAGACAACGTGAGACATTGC +
Preference number: 3 (lower is better)
Translates to: NDIIKLSSLAWY*GPLVKDNVRHC
Trigger: GCAATGTCTCACGTTGTCTTTGACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAACTTTATAATGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR-3UTR CAA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATA +
Preference number: 3 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAELMASS*VTKTGI
Trigger: TATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
3UTR CCA 72 bp AACACAAATGACATTATAAAGTTGTCTTCGCTGGCCTaGTACTGGGGACCACTGGTCAAAGACAACGTGAGA +
Preference number: 3 (lower is better)
Translates to: NTNDIIKLSSLA*YWGPLVKDNVR
Trigger: TCTCACGTTGTCTTTGACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAACTTTATAATGTCATTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR TCA 72 bp ACCGAGCAGTCTCACAATATGAAGTTAAGGAGGGTCTaGAAGCAGGGATTTGACAGCATGCCTAAAATCATA +
Preference number: 3 (lower is better)
Translates to: TEQSHNMKLRRV*KQGFDSMPKII
Trigger: TATGATTTTAGGCATGCTGTCAAATCCCTGCTTTCAGACCCTCCTTAACTTCATATTGTGAGACTGCTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CCA 72 bp TCCATATACACGGATAGGCTTTGTACGGTTCCATTTTaGGTCAGTGGAAGAATTTTCACAACACAAATGACA +
Preference number: 3 (lower is better)
Translates to: SIYTDRLCTVPF*VSGRIFTTQMT
Trigger: TGTCATTTGTGTTGTGAAAATTCTTCCACTGACCCAAAATGGAACCGTACAAAGCCTATCCGTGTATATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp GCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGGCAGGACCTTGGCGGTaGGGGAGGGCGGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ALSPSSGSSASRDSTSPLAGPWR*GRAGVG
Trigger: CCCAACTCCCGCCCTCCCTCACCGCCAAGGTCCTGC...CAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGAGGAAGCGGCGATCCTaGGGGGTGGCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: ALSPSSGSSASRDSTSPLRKRRS*GVATCG
Trigger: GCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCT...CAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCGCAGGACCTTGGCGGTaGGGGAGGGCGGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESAAGPWR*GRAGVG
Trigger: CCCAACTCCCGCCCTCCCTCACCGCCAAGGTCCTGC...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGGCGATCCTGCGGGGTaGCCACCTGCGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAGDPAG*PPAAGL
Trigger: CAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCC...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGGCAGGACCTTGGCGGTaGGGGAGGGCGGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEAGPWR*GRAGVG
Trigger: CCCAACTCCCGCCCTCCCTCACCGCCAAGGTCCTGC...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTGCAGGACCTTGGCGGTaGGGGAGGGCGGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAAGPWR*GRAGVG
Trigger: CCCAACTCCCGCCCTCCCTCACCGCCAAGGTCCTGC...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTCCCCAGGGAGGAGCTaGGGCCAAGAACCTCACCCC +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRSPGRS*GQEPHP
Trigger: GGGGTGAGGTTCTTGGCCTCAGCTCCTCCCTGGGGA...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACAGGAAGCGGCGATCCTaGGGGGTGGCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYRKRRS*GVATCG
Trigger: GCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCT...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AAAAGAGGGATGCGCCCACGTTACGCGCGCGCGCGCGCGCGCACACACACACACGCAGCTGGTGCTCCCTaGAGCAGCAGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KRGMRPRYARARARTHTHAAGAP*SSRLQP
Trigger: AGGCTGCAGCCTGCTGCTCCAGGGAGCACCAGCTGC...GTGTGTGTGTGTGCGCGCGCGCGCGCGCGCGTAACGTGGGCGCATCCCTCTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGGAGCGCTGGCAGGTCTaGAGAATGCGGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ALSPSSGSSASRDSTSPLERWQV*RMRAAF
Trigger: GAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTC...CAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGAGGAAGCGGCGATCCTaGGGGGTGGCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVRKRRS*GVATCG
Trigger: GCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCT...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTGGCGATCCTGCGGGGTaGCCACCTGCGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPGDPAG*PPAAGL
Trigger: CAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCC...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGGCGATCCTGCGGGGTaGCCACCTGCGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGGDPAG*PPAAGL
Trigger: CAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCC...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCCCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESAPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGTGGCTGTCCGTCGCTTaGCCCGTACTCTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQWLSVA*PVLWGR
Trigger: GCGCCCCCAGAGTACGGGCCAAGCGACGGACAGCCA...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCCTGAAGGCGCCATCCTaGGGGTTTGGGAAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESALKAPS*GFGKPE
Trigger: CTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAG...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCGACATTCGGGGGCAATaGCGCTCCATGTTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRDIRGQ*RSMFLR
Trigger: CCGCAGGAACATGGAGCGGCATTGCCCCCGAATGTC...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000439453.5
CDS-3UTR GCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWAARGG*LIPGQR
Trigger: ACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGC...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TTCGGGGGCAATGCCGCTCCATGTTCCTGCGGGGCATCCTCTCCCGTAGGGAGTGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: FGGNAAPCSCGASSPVGSAARGG*LIPGQR
Trigger: ACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGC...ACTCCCTACGGGAGAGGATGCCCCGCAGGAACATGGAGCGGCATTGCCCCCGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR GCA 90 bp ATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGTCCCGGCCCAGGAAGCGGCGATCCTaGGGGGTGGCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: MKYLRLSMAEREPSPSRPRKRRS*GVATCG
Trigger: GCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCT...GGGCCGGGACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPEAGAP*CRCQLL
Trigger: CAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTC...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCGGGTGGTCCAGGCCATaGATTCCACATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRGWSRP*IPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCC...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCGGGTGGTCCAGGCCATaGATTCCACATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: WRKRRSCGVATCGRFAISGWSRP*IPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCC...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEACGSF*GEGLLW
Trigger: CCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPACGSF*GEGLLW
Trigger: CCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGC...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEACGSF*GEGLLW
Trigger: CCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGC...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCGATCCTGCGGGGTaGCCACCTGCGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSGDPAG*PPAAGL
Trigger: CAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCC...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGGGCGATCCTGCGGGGTaGCCACCTGCGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKGDPAG*PPAAGL
Trigger: CAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCC...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGATCAGGCTGACGGCCTaGAGGAAGCGGCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLIRLTA*RKRRSC
Trigger: GCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGAT...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACGGGGTTCGGGACTCTaGACCAGAAATGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCARGSGL*TRNVGS
Trigger: GCTGCCCACATTTCTGGTCCAGAGTCCCGAACCCCG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCGCAGTCCTGCGGGCCTaGTGCTCTCCAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTAVLRA*CSPDHG
Trigger: GCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGC...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGCAGTCCTGCGGGCCTaGTGCTCTCCAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWAVLRA*CSPDHG
Trigger: GCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGC...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGGCTGCTGGAGGCGCTaGGAGATGCCTTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLGCWRR*EMPCSK
Trigger: CTTACTGCAAGGCATCTCTCAGCGCCTCCAGCAGCC...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCTGAAGGCGCCATCCTaGGGGTTTGGGAAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQLKAPS*GFGKPE
Trigger: CTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAG...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTCTGAAGGCGCCATCCTaGGGGTTTGGGAAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: TRACGSFWGEGLLWEWGLLKAPS*GFGKPE
Trigger: CTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAG...AAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCCTTTGCCGGAGAGGCTaGAGGCGCCATCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTLCRRG*RRHPEG
Trigger: ACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAG...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCTGGGTCTGCCGACCTaGAGAACTAACCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYLGLPT*RTNPCP
Trigger: GGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAG...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGCTGGGTCTGCCGACCTaGAGAACTAACCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWELGLPT*RTNPCP
Trigger: GGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAG...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACCAGGAACACACAGCTaGGTGTCGCTCCCTTTCACG +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAPGTHS*VSLPFT
Trigger: CGTGAAAGGGAGCGACACTCAGCTGTGTGTTCCTGG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRGRSAE*GLPSAT
Trigger: TGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCC...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGAGCGCTGGCAGGTCTaGAGAATGCGGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGERWQV*RMRAAF
Trigger: GAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTC...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGAGCGCTGGCAGGTCTaGAGAATGCGGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEERWQV*RMRAAF
Trigger: GAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACGCCGCTCCATGTTCCTaGGGGGCATCCTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHAAPCS*GASSPV
Trigger: TACGGGAGAGGATGCCCCGCAGGAACATGGAGCGGC...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000439453.5
CDS-3UTR GCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAGWSSS*SWAPCW
Trigger: CCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCC...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTCTGGGGAGAGGGTCTaGTCTGGGAATGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESASGERV*SGNGGL
Trigger: CAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGA...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCACTTCCTCTATGGCTaGGCTGTCTCCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPHFLYG*AVSQQR
Trigger: CCGCTGCTGGGAGACAGCGCAGCCATAGAGGAAGTG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVAARGG*LIPGQR
Trigger: ACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGC...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCTGCGGGGTGGCCACCTaGGGCAGGTTTGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSCGVAT*GRFAIS
Trigger: GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCA...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGTGCGGGGTGGCCACCTaGGGCAGGTTTGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKCGVAT*GRFAIS
Trigger: GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCA...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGGAAGCGGCGATCCTaGGGGGTGGCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: WGGPGHGFHMASGVFFQGRKRRS*GVATCG
Trigger: GCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCT...GCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCATCTCCTGGATGGGGTTaGAACAGGCGTACACAGCCG +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCASPGWG*NRRTQP
Trigger: CGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGA...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGCCGGAGCTCCGTGCTaGAGGTGCCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVAGAPC*RCQLLE
Trigger: TTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGC...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGCCGGAGCTCCGTGCTaGAGGTGCCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVAGAPC*RCQLLE
Trigger: TTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGC...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGTCCGGCACCTCGCTGTaGAGTCACACCGCCTACCAC +
Preference number: 4 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRSGTSL*SHTAYH
Trigger: GTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPQVVSV*CRFPAG
Trigger: TCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCATCAGCTGCAGCTGGTaGTCCCTGGAGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESAISCSW*SLEQQA
Trigger: AGCCTGCTGCTCCAGGGAGCACCAGCTGCAGCTGAT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGGTGGGCAGGCTGTCCTaGACACTGCCTTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQVGRLS*TLPSLG
Trigger: CCCAAGGGAAGGCAGTGTGCAGGACAGCCTGCCCAC...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCAGGGGCTCCACCTGTaGAGGGCAAGAGGCATCATG +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPQGLHL*RARGIM
Trigger: CATGATGCCTCTTGCCCTGCACAGGTGGAGCCCCTG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR CCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCAAACATCAGTGCCTTaGCTCTGCGCGCGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPQTSVP*LCARGR
Trigger: TCTGCCGCGCGCGCAGAGCCAAGGCACTGATGTTTG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336873.9
ENST00000439453.5
CDS-3UTR CCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCCTGGGAATGGGGGCTTaGCTGCTATGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESALGMGA*LLWPGW
Trigger: CCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAG...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGGCGATCCTGCGGGGTaGCCACCTGCGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLGDPAG*PPAAGL
Trigger: CAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAATCAGGCTGACGGCCTaGAGGAAGCGGCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLIRLTA*RKRRSC
Trigger: GCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGAT...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACGCCATCCTGAGGGTTTaGGAAGCCGGAGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYAILRV*EAGAPC
Trigger: GCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGC...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCCCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESAPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATGCAGGACCTTGGCGGTaGGGGAGGGCGGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDAGPWR*GRAGVG
Trigger: CCCAACTCCCGCCCTCCCTCACCGCCAAGGTCCTGC...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGTGGATGGTGCTGGGCTaGACCATCCTGGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQWMVLG*TILESC
Trigger: GCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCA...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACATCCCCAGGGAGGAGCTaGGGCCAAGAACCTCACCCC +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTSPGRS*GQEPHP
Trigger: GGGGTGAGGTTCTTGGCCTCAGCTCCTCCCTGGGGA...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAGGCTGCTGGAGGCGCTaGGAGATGCCTTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLGCWRR*EMPCSK
Trigger: CTTACTGCAAGGCATCTCTCAGCGCCTCCAGCAGCC...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGGAGGGGCCAGCACCCTaGCAGTTTGCTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQEGPAP*QFAEPE
Trigger: TTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTC...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCGAGGGGCCAGCACCCTaGCAGTTTGCTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPEGPAP*QFAEPE
Trigger: TTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTC...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGGAGGGGCCAGCACCCTaGCAGTTTGCTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LPARAHWRNLPAAWEWSREGPAP*QFAEPE
Trigger: TTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTC...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTVSAWS*FHLQRG
Trigger: GCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACAC...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTCTCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRSLLLR*CSVKQD
Trigger: GTCCTGCTTCACCGAACAGCACCTCAGGAGCAGAGA...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCGACATTCGGGGGCAATaGCGCTCCATGTTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTDIRGQ*RSMFLR
Trigger: CCGCAGGAACATGGAGCGGCATTGCCCCCGAATGTC...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000439453.5
CDS-3UTR GCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACGACATTCGGGGGCAATaGCGCTCCATGTTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYDIRGQ*RSMFLR
Trigger: CCGCAGGAACATGGAGCGGCATTGCCCCCGAATGTC...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000439453.5
CDS-3UTR GCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCAGAGTTGTGCAGTCCTaGGGGCCTGATGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESARVVQS*GPDALQ
Trigger: CTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGGGAGCTGATTCCATCTaGAGAGGGGCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQGADSI*RGASTL
Trigger: CAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCC...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGGAGCTGATTCCATCTaGAGAGGGGCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEGADSI*RGASTL
Trigger: CAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCACTTCCTCTATGGCTaGGCTGTCTCCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQHFLYG*AVSQQR
Trigger: CCGCTGCTGGGAGACAGCGCAGCCATAGAGGAAGTG...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCCACTTCCTCTATGGCTaGGCTGTCTCCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPHFLYG*AVSQQR
Trigger: CCGCTGCTGGGAGACAGCGCAGCCATAGAGGAAGTG...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDAARGG*LIPGQR
Trigger: ACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGC...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGTGCGGGGTGGCCACCTaGGGCAGGTTTGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLCGVAT*GRFAIS
Trigger: GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCA...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCTGCGGGGTGGCCACCTaGGGCAGGTTTGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: RGCSQRECEASAGRSAECCGVAT*GRFAIS
Trigger: GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCA...GCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCATGGGCAAATTCGCTATaGATCAGGCTGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAWANSL*IRLTAW
Trigger: CCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCA...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCAATAACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGCCGGAGCTCCGTGCTaGAGGTGCCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: AITRACGSFWGEGLLWEWAGAPC*RCQLLE
Trigger: TTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGC...CCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACAGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTEAGAP*CRCQLL
Trigger: CAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTC...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDEAGAP*CRCQLL
Trigger: CAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTC...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLEAGAP*CRCQLL
Trigger: CAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLQVVSV*CRFPAG
Trigger: TCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPQVVSV*CRFPAG
Trigger: TCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTCTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVLRQGM*DLGWSR
Trigger: CCTGGACCACCCCAGATCCCACATCCCCTGACGAAG...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACTCCTTCCTGCCATCTaGACAAGCTTCGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCALLPAI*TSFVRG
Trigger: TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCCAAGAACCTCACCCCTaGCAGAGTTGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRQEPHP*QSCAVL
Trigger: CAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTG...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCALLWPG*SSSCSW
Trigger: CCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGTCTGCTCTGGGAATaGGGGCTTGGCTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVGLLWE*GLGCYG
Trigger: GCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACC...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGGGTCTGCTCTGGGAATaGGGGCTTGGCTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQGLLWE*GLGCYG
Trigger: GCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACC...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGCSQRECEASAGRSAECACGSF*GEGLLW
Trigger: CCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGC...GCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCAGGCTGCCTCATCCCTaGGCAGCGTCTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESARLPHP*AASLSG
Trigger: ACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGTAGGTGCTGCTCGTaGAGGCTGCCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWECRCCS*RLPHPW
Trigger: CCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACA...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTCCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: GLGCYGQDGLRAALGLHAPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...AGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCCCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: RGCSQRECEASAGRSAECPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...GCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGACCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGATTCCACCACGAGGCTaGCTTTGCCTCTGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPIPPRG*LCLCGG
Trigger: ACCTCCACAGAGGCAAAGTCAGCCTCGTGGTGGAAT...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR TCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAAACCGCTTGCAGCTaGCATCAGGGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVETACS*HQGAPQ
Trigger: CTGTGGAGCTCCCTGATGTCAGCTGCAAGCGGTTTC...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGAAACCGCTTGCAGCTaGCATCAGGGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGETACS*HQGAPQ
Trigger: CTGTGGAGCTCCCTGATGTCAGCTGCAAGCGGTTTC...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTGCAGGACCTTGGCGGTaGGGGAGGGCGGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSAGPWR*GRAGVG
Trigger: CCCAACTCCCGCCCTCCCTCACCGCCAAGGTCCTGC...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGCTGCTGGAGGCGCTaGGAGATGCCTTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVGCWRR*EMPCSK
Trigger: CTTACTGCAAGGCATCTCTCAGCGCCTCCAGCAGCC...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGAGGGCGCAAGCTGCTaGTGGCTGTGTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLEGASC*WLCPQE
Trigger: CTCCTGAGGACACAGCCATCAGCAGCTTGCGCCCTC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGAGGGGCCAGCACCCTaGCAGTTTGCTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVEGPAP*QFAEPE
Trigger: TTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTC...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVVSAWS*FHLQRG
Trigger: GCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACAC...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCCTTTGCCGGAGAGGCTaGAGGCGCCATCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RGCSQRECEASAGRSAECLCRRG*RRHPEG
Trigger: ACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAG...GCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCCAGGAACACACAGCTaGGTGTCGCTCCCTTTCACG +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYPGTHS*VSLPFT
Trigger: CGTGAAAGGGAGCGACACTCAGCTGTGTGTTCCTGG...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCAGGTGTCCCACTCCGTaGTCAGTTCTTCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRRCPTP*SVLPEN
Trigger: GTTCTCAGGAAGAACTGAGCACGGAGTGGGACACCT...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGG +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPALQNAG*LQQQQG
Trigger: CCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGG +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLLQNAG*LQQQQG
Trigger: CCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGG +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQLQNAG*LQQQQG
Trigger: CCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTGRSAE*GLPSAT
Trigger: TGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCC...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVGRSAE*GLPSAT
Trigger: TGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCC...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEGRSAE*GLPSAT
Trigger: TGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPPPFGW*WAEPSW
Trigger: CCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGG...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGACCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGPPFGW*WAEPSW
Trigger: CCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGG...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGAGAGTTGTGCAGTCCTaGGGGCCTGATGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQRVVQS*GPDALQ
Trigger: CTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCT...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGAGAGTTGTGCAGTCCTaGGGGCCTGATGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQERVVQS*GPDALQ
Trigger: CTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCT...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTGGAGGCGCTGAGAGATaGCTTGCAGTAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAGGAER*LAVRSP
Trigger: AGGGCTCCTTACTGCAAGGCATCTCTCAGCGCCTCC...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEGWSSS*SWAPCW
Trigger: CCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCC...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGTCTGGGGAGAGGGTCTaGTCTGGGAATGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVSGERV*SGNGGL
Trigger: CAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGA...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAGCAATAACAAGGGCCTaGGGGTCCTTCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLAITRA*GSFWGE
Trigger: CTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGGCAATAACAAGGGCCTaGGGGTCCTTCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQAITRA*GSFWGE
Trigger: CTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TGCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTTTGCTGAGCCTGAACTaGATTCCAGACCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CAVSQQRLLSQQGQHQPFLLSLN*IPDQGL
Trigger: CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAA...AAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACTCCTCACGAGCCCCATaGAGGACTCTGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHSSRAP*RTLLVS
Trigger: TGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGA...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTTCCTCACGAGCCCCATaGAGGACTCTGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPASSRAP*RTLLVS
Trigger: TGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGA...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGAGGAAGCGGCGATCCTaGGGGGTGGCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SCWKYVSWMGLQQAYTAVRKRRS*GVATCG
Trigger: GCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCT...CACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTATCTCCTGGATGGGGTTaGAACAGGCGTACACAGCCG +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLSPGWG*NRRTQP
Trigger: CGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGA...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGGCTGCAGGTGCCAGCTaGTGGAAATATGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPAAGAS*WKYVSW
Trigger: CCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGC...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGGCCGGAGCTCCGTGCTaGAGGTGCCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GQTSIRSPSCHLDKLRQGAGAPC*RCQLLE
Trigger: TTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGGC...CCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQEAGAP*CRCQLL
Trigger: CAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTC...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTTCCGGCACCTCGCTGTaGAGTCACACCGCCTACCAC +
Preference number: 4 (lower is better)
Translates to: GLGCYGQDGLRAALGLHASGTSL*SHTAYH
Trigger: GTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA...AGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCACCCCTGGCAGAGTTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 4 (lower is better)
Translates to: LTPGRVVQSCGPDALQIMVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...CATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGGTGGTCTCCGTGTGCTaGCGCTTCCCTGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: GQHPDSLLSLNCIPDQGLVVSVC*RFPAGT
Trigger: CGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCAC...CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGGATGACGGCTGCAGCTaGCAGTGCCCTGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQDDGCS*QCPGAL
Trigger: CAGAGCCCCAGGGCACTGGCAGCTGCAGCCGTCATC...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp CACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCCAGGGGCTCCACCTGTaGAGGGCAAGAGGCATCATG +
Preference number: 4 (lower is better)
Translates to: HPVLQQLLLCFAGEAEGAQGLHL*RARGIM
Trigger: CATGATGCCTCTTGCCCTGCACAGGTGGAGCCCCTG...GGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAAGGGAGGGCGGGAGTTaGGTGCTGACAATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLREGGS*VLTISP
Trigger: AGGACTGATTGTCAGCACCCAACTCCCGCCCTCCCT...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCAGGGAGGGCGGGAGTTaGGTGCTGACAATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTREGGS*VLTISP
Trigger: AGGACTGATTGTCAGCACCCAACTCCCGCCCTCCCT...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACAGGGAGGGCGGGAGTTaGGTGCTGACAATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYREGGS*VLTISP
Trigger: AGGACTGATTGTCAGCACCCAACTCCCGCCCTCCCT...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGAGGGAGGGCGGGAGTTaGGTGCTGACAATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEREGGS*VLTISP
Trigger: AGGACTGATTGTCAGCACCCAACTCCCGCCCTCCCT...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGGTGGTCCAGGCCATaGATTCCACATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVGWSRP*IPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCC...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGTCTTGGGCTCCATGCTaGGTCAGCATCTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPSWAPC*VSISGA
Trigger: TGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGA...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGTCTTGGGCTCCATGCTaGGTCAGCATCTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLSWAPC*VSISGA
Trigger: TGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGA...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGTCTTCGAGCTGCTCTTaGGCTCCATGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWSSSCS*APCWVS
Trigger: GCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGA...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGCTGGGAATGGGGGCTTaGCTGCTATGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVLGMGA*LLWPGW
Trigger: CCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAG...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGTCTGCTCTGGGAATaGGGGCTTGGCTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSGLLWE*GLGCYG
Trigger: GCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACC...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAGGCTGCCTCATCCCTaGGCAGCGTCTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPRLPHP*AASLSG
Trigger: ACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCT...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGTGTAGGTGCTGCTCGTaGAGGCTGCCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVCRCCS*RLPHPW
Trigger: CCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACA...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCAATCAGGCTGACGGCCTaGAGGAAGCGGCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: TPCFSSFCFALPERLKAPIRLTA*RKRRSC
Trigger: GCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGAT...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCAATAACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGCCATCCTGAGGGTTTaGGAAGCCGGAGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: AITRACGSFWGEGLLWEWAILRV*EAGAPC
Trigger: GCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGC...CCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWTSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCTACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 4 (lower is better)
Translates to: WRKRRSCGVATCGRFAISYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCACCCCTGGCAGAGTTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LTPGRVVQSCGPDALQIMNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...CATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 4 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGAATGTGGGCAGCAGCTaGGTACCTGCGACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQNVGSS*VPATSA
Trigger: GGCAGAAGTCGCAGGTACCCAGCTGCTGCCCACATT...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CAA 72 bp GAGGTTGTGGTGCCCATTCCAGCAAGAACATGCTGCTaGGCTGTCCGTCGCTTGGCCCGTACTCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: EVVVPIPARTCC*AVRRLARTLGA
Trigger: CGCCCCCAGAGTACGGGCCAAGCGACGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGAAACCGCTTGCAGCTaGCATCAGGGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVETACS*HQGAPQ
Trigger: CTGTGGAGCTCCCTGATGTCAGCTGCAAGCGGTTTC...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACTGGATGGTGCTGGGCTaGACCATCCTGGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDWMVLG*TILESC
Trigger: GCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCA...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCTCCCCAGGGAGGAGCTaGGGCCAAGAACCTCACCCC +
Preference number: 4 (lower is better)
Translates to: GHGFHMASGVFFQGRCAPSPGRS*GQEPHP
Trigger: GGGGTGAGGTTCTTGGCCTCAGCTCCTCCCTGGGGA...GGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCGCCATTTCCACTTCCTaGGCCTCTGGAATGTGGATT +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRAISTS*ASGMWI
Trigger: AATCCACATTCCAGAGGCTCAGGAAGTGGAAATGGC...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGGGCTGCTGGAGGCGCTaGGAGATGCCTTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGGCWRR*EMPCSK
Trigger: CTTACTGCAAGGCATCTCTCAGCGCCTCCAGCAGCC...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCGAGGGCGCAAGCTGCTaGTGGCTGTGTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: WAASLSGGLPAHSVKPGCEGASC*WLCPQE
Trigger: CTCCTGAGGACACAGCCATCAGCAGCTTGCGCCCTC...GCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGCGGCGATCCTGGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGKFAMHQADGLEEAAILVSAWS*FHLQRG
Trigger: GCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACAC...CAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESATAPAL*RSECRD
Trigger: ATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPTAPAL*RSECRD
Trigger: ATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGT...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGCTTTGCCGGAGAGGCTaGAGGCGCCATCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LCSPAGLMLSRSWPDKHPLCRRG*RRHPEG
Trigger: ACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAG...CGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGTGGTCCTGTTGTCACTaGATTCTCAGGGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQWSCCH*ILRAQP
Trigger: GGGCTGAGCCCTGAGAATTCAGTGACAACAGGACCA...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCGCCAAAAGTGGGAGATaGATGCTAGAGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRAKSGR*MLELVF
Trigger: GAACACCAGCTCTAGCATGCATCTCCCACTTTTGGC...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR GCA 90 bp GGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGG +
Preference number: 4 (lower is better)
Translates to: GAWLLWPGWSSSCSWAPCLQNAG*LQQQQG
Trigger: CCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG...GCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGCAGGTCTGCAGAATaGGGGCTGCCTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVGRSAE*GLPSAT
Trigger: TGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCC...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTATCTCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLSLLLR*CSVKQD
Trigger: GTCCTGCTTCACCGAACAGCACCTCAGGAGCAGAGA...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVPPFGW*WAEPSW
Trigger: CCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGG...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCTTTCAGGGCAGATGTaGTCCCACCCTTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPLSGQM*SHPLDG
Trigger: ACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TGCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTCTTTCAGGGCAGATGTaGTCCCACCCTTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: CAVSQQRLLSQQGQHQPFLSGQM*SHPLDG
Trigger: ACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAG...AAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCAGAGTTGTGCAGTCCTaGGGGCCTGATGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GAWLLWPGWSSSCSWAPCRVVQS*GPDALQ
Trigger: CTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCT...GCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGCGCTGAGAGATaGCTTGCAGTAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVGGAER*LAVRSP
Trigger: AGGGCTCCTTACTGCAAGGCATCTCTCAGCGCCTCC...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGTGCTCTTGGGCTCCATaGTGGGTCAGCATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWCSWAP*WVSISG
Trigger: TCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCA...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTTGCTCTTGGGCTCCATaGTGGGTCAGCATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVCSWAP*WVSISG
Trigger: TCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCA...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVGWSSS*SWAPCW
Trigger: CCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCC...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACTCTGGGGAGAGGGTCTaGTCTGGGAATGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDSGERV*SGNGGL
Trigger: CAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGA...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCACCCCTGGCAGAGTTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGTCTGGGGAGAGGGTCTaGTCTGGGAATGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LTPGRVVQSCGPDALQIMSGERV*SGNGGL
Trigger: CAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGA...CATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTATTGCTGAGCCTGAACTaGATTCCAGACCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLLLSLN*IPDQGL
Trigger: CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAA...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACTTGCTGAGCCTGAACTaGATTCCAGACCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHLLSLN*IPDQGL
Trigger: CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAA...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGGGAGCTGATTCCATCTaGAGAGGGGCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGGADSI*RGASTL
Trigger: CAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCC...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGGAGCTGATTCCATCTaGAGAGGGGCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDGADSI*RGASTL
Trigger: CAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCC...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGTCCCGGCCCCACTTCCTCTATGGCTaGGCTGTCTCCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: MKYLRLSMAEREPSPSRPHFLYG*AVSQQR
Trigger: CCGCTGCTGGGAGACAGCGCAGCCATAGAGGAAGTG...GGGCCGGGACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCACCTGCGGCAGGTTTaGCATCAGCAAGCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPHLRQV*HQQALN
Trigger: ATTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATTGCGGGGTGGCCACCTaGGGCAGGTTTGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDCGVAT*GRFAIS
Trigger: GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCA...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATTGCGGGGTGGCCACCTaGGGCAGGTTTGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PHPGLVPPWEACFLSVLDCGVAT*GRFAIS
Trigger: GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCA...ATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCTGGGCAAATTCGCTATaGATCAGGCTGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPWANSL*IRLTAW
Trigger: CCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCA...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGCTGCAGGTGCCAGCTaGTGGAAATATGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEAAGAS*WKYVSW
Trigger: CCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTGCTGCAGGTGCCAGCTaGTGGAAATATGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAAAGAS*WKYVSW
Trigger: CCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGC...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGGTGTATTGGATCAGCTaGAGCTGGTGCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEVYWIS*SWCSLE
Trigger: CTCCAGGGAGCACCAGCTGCAGCTGATCCAATACAC...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGCCAGCAAGAACATGCTaGTTGGCTGTCCGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEPARTC*LAVRRL
Trigger: CAAGCGACGGACAGCCAAGCAGCATGTTCTTGCTGG...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCGCCCACCCATCAGCATaGTCACAATCAGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTAHPSA*SQSGRE
Trigger: CTCCCTTCCTGATTGTGAGCATGCTGATGGGTGGGC...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR GCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAGCCCACCCATCAGCATaGTCACAATCAGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLAHPSA*SQSGRE
Trigger: CTCCCTTCCTGATTGTGAGCATGCTGATGGGTGGGC...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR GCA 90 bp TGCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTCATTTTCCATGTTCCTaGGGGGCATCCTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: CAVSQQRLLSQQGQHQPFHFPCS*GASSPV
Trigger: TACGGGAGAGGATGCCCCGCAGGAACATGGAAAATG...AAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429411.5
CDS-3UTR GCA 90 bp TGCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTCTGGCAGTCGCTGTTTaGCTTACCCTCTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: CAVSQQRLLSQQGQHQPFLAVAV*LTLSQS
Trigger: TGATTGGGAGAGGGTAAGGCAAACAGCGACTGCCAG...AAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCTGGGCTGAACCATCCTaGAGTCCTGCTGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPWAEPS*SPAGDA
Trigger: AGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCA...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGTGGGCTGAACCATCCTaGAGTCCTGCTGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEWAEPS*SPAGDA
Trigger: AGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCA...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGCCCTTTGGATGGTGCTaGGCTGAACCATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWPFGWC*AEPSWS
Trigger: ACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGG...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTCCCTTTGGATGGTGCTaGGCTGAACCATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TRACGSFWGEGLLWEWGLPFGWC*AEPSWS
Trigger: ACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGG...AAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRIPHGQ*RFLSGQ
Trigger: CTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGGGTGGTCCAGGCCATaGATTCCACATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLGWSRP*IPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCATGTGGGATCTGGGGTaGTCCAGGCCATGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTMWDLG*SRPWIP
Trigger: TGGAATCCATGGCCTGGACCACCCCAGATCCCACAT...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAATGTGGGATCTGGGGTaGTCCAGGCCATGGATTCCA +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLMWDLG*SRPWIP
Trigger: TGGAATCCATGGCCTGGACCACCCCAGATCCCACAT...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGCGTGGCCTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HPDSLLSLNCIPDQGLRGLRQGM*DLGWSR
Trigger: CCTGGACCACCCCAGATCCCACATCCCCTGACGAAG...GCCACGCAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCTCCTTCCTGCCATCTaGACAAGCTTCGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQLLPAI*TSFVRG
Trigger: TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAG...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGCTCCTTCCTGCCATCTaGACAAGCTTCGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWLLPAI*TSFVRG
Trigger: TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAG...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTC +
Preference number: 4 (lower is better)
Translates to: TYLRRGSGVGLLTDPAPRMLSRS*PDKHPF
Trigger: GAACGGATGCTTGTCTGGCCATGATCTGGAGAGCAT...GCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACTCTTGGGCTCCATGCTaGGTCAGCATCTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYSWAPC*VSISGA
Trigger: TGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGA...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTGGCCTTGTTCCCCCGTaGGAAGCTTGTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPGLVPP*EACFLS
Trigger: AGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCC...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTGGTACACTTCCTCTATaGCTGCGCTGTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAGTLPL*LRCLPA
Trigger: TGCTGGGAGACAGCGCAGCCATAGAGGAAGTGTACC...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACACTAGGAGTCCAGGGTaGGCAGGCTGTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDTRSPG*AGCPAH
Trigger: GTGTGCAGGACAGCCTGCCCACCCTGGACTCCTAGT...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACTCAGAATTTGCTCGATaGAGGTGTCCCACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHSEFAR*RCPTPC
Trigger: GCACGGAGTGGGACACCTTCATCGAGCAAATTCTGA...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCAGAATTTGCTCGATaGAGGTGTCCCACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTSEFAR*RCPTPC
Trigger: GCACGGAGTGGGACACCTTCATCGAGCAAATTCTGA...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGAAGGCAAAATGACCTaGGGCCATTTCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLEGKMT*GHFHFL
Trigger: CAGGAAGTGGAAATGGCCTCAGGTCATTTTGCCTTC...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDVSAWS*FHLQRG
Trigger: GCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACAC...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPATAPAL*RSECRD
Trigger: ATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGT...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGTAPAL*RSECRD
Trigger: ATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGT...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTCTGGGTCTGCCGACCTaGAGAACTAACCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CGPDALQIMARQASVLLPLGLPT*RTNPCP
Trigger: GGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAG...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGTCCCGGCCCCCAGGAACACACAGCTaGGTGTCGCTCCCTTTCACG +
Preference number: 4 (lower is better)
Translates to: MKYLRLSMAEREPSPSRPPGTHS*VSLPFT
Trigger: CGTGAAAGGGAGCGACACTCAGCTGTGTGTTCCTGG...GGGCCGGGACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCGCACAATCCCCATGGTaGTACAGGTGGCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTAQSPW*YRWLDV
Trigger: GACATCAAGCCACCTGTATCACCATGGGGATTGTGC...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR GCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTAGGTGTCCCACTCCGTaGTCAGTTCTTCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPARCPTP*SVLPEN
Trigger: GTTCTCAGGAAGAACTGAGCACGGAGTGGGACACCT...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGG +
Preference number: 4 (lower is better)
Translates to: RGCSQRECEASAGRSAECLQNAG*LQQQQG
Trigger: CCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG...GCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGTCTCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVSLLLR*CSVKQD
Trigger: GTCCTGCTTCACCGAACAGCACCTCAGGAGCAGAGA...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATGCCGCTCCATGTTCCTaGGGGGCATCCTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDAAPCS*GASSPV
Trigger: TACGGGAGAGGATGCCCCGCAGGAACATGGAGCGGC...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000439453.5
CDS-3UTR GCA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCGCTCCATGTTCCTaGGGGGCATCCTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: CGPDALQIMARQASVLLPAAPCS*GASSPV
Trigger: TACGGGAGAGGATGCCCCGCAGGAACATGGAGCGGC...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR GCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCATCCGTTCTCCTTCCTaGCATCTGGACAAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESAIRSPS*HLDKLR
Trigger: ACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGAT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCTGCAGTAAGGAGCCCTaGCATCTGGAACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPCSKEP*HLEQAH
Trigger: ATGTGCCTGTTCCAGATGGCAGGGCTCCTTACTGCA...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGTGCAGTAAGGAGCCCTaGCATCTGGAACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWCSKEP*HLEQAH
Trigger: ATGTGCCTGTTCCAGATGGCAGGGCTCCTTACTGCA...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGGAGGCGCTGAGAGATaGCTTGCAGTAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLGGAER*LAVRSP
Trigger: AGGGCTCCTTACTGCAAGGCATCTCTCAGCGCCTCC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGGCTGCCTTCAGCAAGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: ENVRRALAGLQNAGCLQQGWSSS*SWAPCW
Trigger: CCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCC...TTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCAATAACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGCAATAACAAGGGCCTaGGGGTCCTTCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: AITRACGSFWGEGLLWEWAITRA*GSFWGE
Trigger: CTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC...CCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGGGAGCTGATTCCATCTaGAGAGGGGCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: VAFTDPINILIQALFPRGGADSI*RGASTL
Trigger: CAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCC...CCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACATCCTCACGAGCCCCATaGAGGACTCTGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTSSRAP*RTLLVS
Trigger: TGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGA...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGTCCTCACGAGCCCCATaGAGGACTCTGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGSSRAP*RTLLVS
Trigger: TGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGA...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTCAGTGAAGCCAGGCTaGTGTGGTACACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESASVKPG*CGTLPL
Trigger: TAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGA...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGTCTCCTGGATGGGGTTaGAACAGGCGTACACAGCCG +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLSPGWG*NRRTQP
Trigger: CGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGA...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTGAATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCGAAGCCGGAGCTCCGTaGTGCAGGTGCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNAVVMCEVVGAARGGCLEAGAP*CRCQLL
Trigger: CAGCAGCTGGCACCTGCAGCACGGAGCTCCGGCTTC...GAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCAGCAGCTTCTGCTTTaGTTTGCCGGAGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHQQLLL*FAGEAE
Trigger: TTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTG...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTGCTTCAGCAGCTTCTaGTTTGCTTTGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTCFSSF*FALPER
Trigger: CCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCA...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCAGTCCTTTATAGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGGTGGTCTCCGTGTGCTaGCGCTTCCCTGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: SVLYRGCSQRECEASAGRVVSVC*RFPAGT
Trigger: CGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCAC...CCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCTATAAAGGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDQVVSV*CRFPAG
Trigger: TCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGACTTCCTGGAGCTaGAGCAACCACAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVGTSWS*SNHSRE
Trigger: TTCTCTGCTGTGGTTGCTGCAGCTCCAGGAAGTCCC...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCATTCCAGCAAGAACATaGTGCTTGGCTGTCCGTCGC +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTIPART*CLAVRR
Trigger: GCGACGGACAGCCAAGCAGCATGTTCTTGCTGGAAT...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp CCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCATCTGCAGAGGGGGGCAAGAGGCATCATaGCCACCCATCAGCATGCTC +
Preference number: 4 (lower is better)
Translates to: PHAGLCWCQPGADSICRGGQEAS*PPISML
Trigger: GAGCATGCTGATGGGTGGGCATGATGCCTCTTGCCC...CCCTCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR GCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCGACGCCTCCACATCCTaGAAAAGGTCTTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPDASTS*KRSFWQ
Trigger: CTGCCAGAAAGACCTTTTGCAGGATGTGGAGGCGTC...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACGACATTCGGGGGCAATaGCGCTCCTGGAATTGCAAA +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHDIRGQ*RSWNCK
Trigger: TTTGCAATTCCAGGAGCGGCATTGCCCCCGAATGTC...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGGCTCCACTTTAGTTTaGTCCAAGTTCCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAGSTLV*SKFQRE
Trigger: TTCCCTCTGGAACTTGGACCAAACTAAAGTGGAGCC...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
CDS-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAAAAACAGGGATAATCTaGACATTCGGGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAKTGII*TFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTT...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTATCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLSTGNS*RLMASS
Trigger: AGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACGGGTGGTCCAGGCCATaGATTCCACATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDGWSRP*IPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCC...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCATGTGGGATCTGGGGTaGTCCAGGCCATGGATTCCA +
Preference number: 4 (lower is better)
Translates to: HPVLQQLLLCFAGEAEGAMWDLG*SRPWIP
Trigger: TGGAATCCATGGCCTGGACCACCCCAGATCCCACAT...GGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGTCTTCGAGCTGCTCTTaGGCTCCATGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLSSSCS*APCWVS
Trigger: GCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGA...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGCTGGGAATGGGGGCTTaGCTGCTATGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQLGMGA*LLWPGW
Trigger: CCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAG...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCCATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSHAGLC*CQPGAD
Trigger: ATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATG...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGAGGCTGCCTCATCCCTaGGCAGCGTCTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GQHPDSLLSLNCIPDQGLRLPHP*AASLSG
Trigger: ACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCT...CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGCTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: ALSPSSGSSASRDSTSPLLYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...CAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTTACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCCATAAGAGGTTGTGGTGCCCATTCCAGCAAGAACATGCTGCTTGGCTGTCCGCCTGCGGCGTGGGAGTaGAGTCGGCCTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: AIRGCGAHSSKNMLLGCPPAAWE*SRPAHR
Trigger: TCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGG...CGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTCAGAATTCAACCAAGTaGTCTCCGTGTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVQNSTK*SPCAAA
Trigger: AGCGGCAGCACACGGAGACCACTTGGTTGAATTCTG...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGCAGAATTCAACCAAGTaGTCTCCGTGTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWQNSTK*SPCAAA
Trigger: AGCGGCAGCACACGGAGACCACTTGGTTGAATTCTG...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGACAGAATTCAACCAAGTaGTCTCCGTGTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGQNSTK*SPCAAA
Trigger: AGCGGCAGCACACGGAGACCACTTGGTTGAATTCTG...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGCTGCCAGTGCCCTaGGGCTCTGAGCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDQLPVP*GSEQNL
Trigger: GAGGTTCTGCTCAGAGCCCCAGGGCACTGGCAGCTG...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTTGTACAGAACAGCTaGACAGGGTGTAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAVVQNS*TGCSSK
Trigger: CTTTGAGCTACACCCTGTCCAGCTGTTCTGTACAAC...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR CCA 90 bp TGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCCATCCAACCCACACGTaGGCTCGGAAAGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WGGPGHGFHMASGVFFQGHPTHT*ARKGVL
Trigger: CAGCACCCCTTTCCGAGCCCACGTGTGGGTTGGATG...GCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR TCA 90 bp TGCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTAAGAATCCAACTAGCTaGTCCAGAAACCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CAVSQQRLLSQQGQHQPFKNPTS*SRNRLQ
Trigger: CTGCAAGCGGTTTCTGGATCAGCTAGTTGGATTCTT...AAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATTGGATGGTGCTGGGCTaGACCATCCTGGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PHPGLVPPWEACFLSVLDWMVLG*TILESC
Trigger: GCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCA...ATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCTGGATGGTGCTGGGCTaGACCATCCTGGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GHGFHMASGVFFQGRCAPWMVLG*TILESC
Trigger: GCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCA...GGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCGCAGTCCTGCGGGCCTaGTGCTCTCCAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSAVLRA*CSPDHG
Trigger: GCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGC...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAAGGCAAAATGACCTaGGGCCATTTCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVEGKMT*GHFHFL
Trigger: CAGGAAGTGGAAATGGCCTCAGGTCATTTTGCCTTC...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGAGGGCGCAAGCTGCTaGTGGCTGTGTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNEGASC*WLCPQE
Trigger: CTCCTGAGGACACAGCCATCAGCAGCTTGCGCCCTC...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCGAGGGCGCAAGCTGCTaGTGGCTGTGTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIEGASC*WLCPQE
Trigger: CTCCTGAGGACACAGCCATCAGCAGCTTGCGCCCTC...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGGCGCAAGCTGCTaGTGGCTGTGTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SCWKYVSWMGLQQAYTAVEGASC*WLCPQE
Trigger: CTCCTGAGGACACAGCCATCAGCAGCTTGCGCCCTC...CACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTTCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPSRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGCAGTTCAAACATCAGTaGCTTGGCTCTGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: GQTSIRSPSCHLDKLRQGQFKHQ*LGSARA
Trigger: CGCGCGCGCAGAGCCAAGGCACTGATGTTTGAACTG...CCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR GCA 90 bp GTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGGAGCGCTGGCAGGTCTaGAGAATGCGGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPAAGNMSPGWGCNRRTQERWQV*RMRAAF
Trigger: GAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTC...CTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGTCTCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGSLLLR*CSVKQD
Trigger: GTCCTGCTTCACCGAACAGCACCTCAGGAGCAGAGA...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LCSPAGLMLSRSWPDKHPPPFGW*WAEPSW
Trigger: CCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGG...CGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: WGGPGHGFHMASGVFFQGPPFGW*WAEPSW
Trigger: CCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGG...GCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGCTTTCAGGGCAGATGTaGTCCCACCCTTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVLSGQM*SHPLDG
Trigger: ACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAG...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACATCCGTTCTCCTTCCTaGCATCTGGACAAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHIRSPS*HLDKLR
Trigger: ACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGAT...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGAGAGTTGTGCAGTCCTaGGGGCCTGATGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQRVVQS*GPDALQ
Trigger: CTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCT...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACGGAGGCGCTGAGAGATaGCTTGCAGTAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDGGAER*LAVRSP
Trigger: AGGGCTCCTTACTGCAAGGCATCTCTCAGCGCCTCC...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATCCTCACGAGCCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCAGGAGGCGCTGAGAGATaGCTTGCAGTAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ILTSPMQDSAGVSLELIPGGAER*LAVRSP
Trigger: AGGGCTCCTTACTGCAAGGCATCTCTCAGCGCCTCC...TGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCTCTGGGGAGAGGGTCTaGTCTGGGAATGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GHGFHMASGVFFQGRCAPSGERV*SGNGGL
Trigger: CAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGA...GGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCCCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GHGFHMASGVFFQGRCAPPHAGL*WCQPGA
Trigger: AGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG...GGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCCTGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SCGPDALQIMARQASVLLPHAGL*WCQPGA
Trigger: AGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG...AAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGTCCTCACGAGCCCCATaGAGGACTCTGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQSSRAP*RTLLVS
Trigger: TGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGA...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTCAGTGAAGCCAGGCTaGTGTGGTACACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWESVKPG*CGTLPL
Trigger: TAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGA...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGTCAGTGAAGCCAGGCTaGTGTGGTACACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQSVKPG*CGTLPL
Trigger: TAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGA...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTGGGTCAGCATCTCCTGGATGGGGTTaGAACAGGCGTACACAGCCG +
Preference number: 4 (lower is better)
Translates to: CYGQDGLRAALGLHAGSASPGWG*NRRTQP
Trigger: CGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGA...TGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCAGCTCCGTGCTGCAGGTaGCAGCTGCTGGAAATATGT +
Preference number: 4 (lower is better)
Translates to: TPCFSSFCFALPERLKAPAPCCR*QLLEIC
Trigger: ACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGC...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGAGCAAGTTCACCCCGTaGTTCAGCAGCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRSKFTP*FSSFCF
Trigger: AAAGCAGAAGCTGCTGAAGCACGGGGTGAACTTGCT...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGAGCAAGTTCACCCCGTaGTTCAGCAGCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQSKFTP*FSSFCF
Trigger: AAAGCAGAAGCTGCTGAAGCACGGGGTGAACTTGCT...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTCAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTGTCCTGCACACTGCCTTCCCTTGGGAAACATGGCCATAAGAGGTTGTGGTGCGTGGTCTCCGTGTGCTaGCGCTTCCCTGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: LSCTLPSLGKHGHKRLWCVVSVC*RFPAGT
Trigger: CGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCAC...GCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGCAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp CTGTCCTGCACACTGCCTTCCCTTGGGAAACATGGCCATAAGAGGTTGTGGTGCAGCCAGGCATCCCAGTaGTCGGGGTTCGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: LSCTLPSLGKHGHKRLWCSQASQ*SGFGTL
Trigger: CAGAGTCCCGAACCCCGAGCACTGGGATGCCTGGCT...GCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCCCTGGAGCAGCAGGCTaGAGCCTGGCAGCCCTACAA +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPPGAAG*SLAALQ
Trigger: TTGTAGGGCTGCCAGGCTGCAGCCTGCTGCTCCAGG...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACTTTAGAGATGACGGCTaGAGCTGCCAGTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDFRDDG*SCQCPG
Trigger: CCCAGGGCACTGGCAGCTGCAGCCGTCATCTCTAAA...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGCAGCGGGGCAATAGCTaGACTGGCGTGATGCATCCA +
Preference number: 4 (lower is better)
Translates to: GQTSIRSPSCHLDKLRQGQRGNS*TGVMHP
Trigger: TGGATGCATCACGCCAGTGCAGCTATTGCCCCGCTG...CCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCAATGCCAGCTCTTGTTaGATCGCCTTCTTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: WRKRRSCGVATCGRFAISNASSC*IAFFLY
Trigger: GTAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATT...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCAAAGCAACTCCTGTTaGTCTAGCAGGGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHQSNSC*SSRVWE
Trigger: TTCCCAGACCCTGCTAGACCAACAGGAGTTGCTTTG...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCAAAGCAACTCCTGTTaGTCTAGCAGGGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAQSNSC*SSRVWE
Trigger: TTCCCAGACCCTGCTAGACCAACAGGAGTTGCTTTG...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGCAAAGCAACTCCTGTTaGTCTAGCAGGGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWQSNSC*SSRVWE
Trigger: TTCCCAGACCCTGCTAGACCAACAGGAGTTGCTTTG...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCAAAACAGGGATAATCTaGACATTCGGGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESAKTGII*TFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCACCCCTGGCAGAGTTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGCCCTTTGGATGGTGCTaGGCTGAACCATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LTPGRVVQSCGPDALQIMPFGWC*AEPSWS
Trigger: ACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGG...CATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGIPHGQ*RFLSGQ
Trigger: CTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGCCATGGATTCCACATaGCCAGTGGCGTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGAMDST*PVAFSF
Trigger: GAAAGAAAACGCCACTGGCCATGTGGAATCCATGGC...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGGCCATGGATTCCACATaGCCAGTGGCGTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQAMDST*PVAFSF
Trigger: GAAAGAAAACGCCACTGGCCATGTGGAATCCATGGC...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGGCTGCCTTCAGCAAATGTGGGATCTGGGGTaGTCCAGGCCATGGATTCCA +
Preference number: 4 (lower is better)
Translates to: ENVRRALAGLQNAGCLQQMWDLG*SRPWIP
Trigger: TGGAATCCATGGCCTGGACCACCCCAGATCCCACAT...TTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTC +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPMLSRS*PDKHPF
Trigger: GAACGGATGCTTGTCTGGCCATGATCTGGAGAGCAT...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACAAGAACCTCACCCCTaGCAGAGTTGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTQEPHP*QSCAVL
Trigger: CAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTG...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCATCTGCAGAGGGTCTTGGGCTCCATGCTaGGTCAGCATCTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PHAGLCWCQPGADSICRGSWAPC*VSISGA
Trigger: TGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGA...CCCTCTGCAGATGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGLLWPG*SSSCSW
Trigger: CCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAG...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTLLWPG*SSSCSW
Trigger: CCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAG...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCTGGGAATGGGGGCTTaGCTGCTATGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: AGNMSPGWGCNRRTQPWRLGMGA*LLWPGW
Trigger: CCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAG...CCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCTGGGAATGGGGGCTTaGCTGCTATGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDLGMGA*LLWPGW
Trigger: CCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAG...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGGCTTCCGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ARDLVICSTGNSWRLMASACGSF*GEGLLW
Trigger: CCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGC...GGAAGCCATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACAGGCCTTGTTCCCCCGTaGGAAGCTTGTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTGLVPP*EACFLS
Trigger: AGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCC...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGGCCTTGTTCCCCCGTaGGAAGCTTGTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLGLVPP*EACFLS
Trigger: AGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCAATAACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGCATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: AITRACGSFWGEGLLWEWHAGLC*CQPGAD
Trigger: ATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATG...CCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGT +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQSVSFR*TSSPFS
Trigger: ACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCT...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGT +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPSVSFR*TSSPFS
Trigger: ACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCT...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCG +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTWKYVS*MGLQQA
Trigger: CGCCTGTTGCAACCCCATCCAGGAGACATATTTCCA...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGTGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCG +
Preference number: 4 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRWKYVS*MGLQQA
Trigger: CGCCTGTTGCAACCCCATCCAGGAGACATATTTCCA...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGCCATCCTGAGGGTTTaGGAAGCCGGAGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNAILRV*EAGAPC
Trigger: GCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGC...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCGCCATCCTGAGGGTTTaGGAAGCCGGAGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIAILRV*EAGAPC
Trigger: GCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGC...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTGCCATCCTGAGGGTTTaGGAAGCCGGAGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: FHRPHQHPHPGLVPPWEAAILRV*EAGAPC
Trigger: GCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGC...AGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCTTCCCAGTCACCTCCTaGGTGCAGTTCAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSFPVTS*VQFRAS
Trigger: ACTTGCTCTGAACTGCACCCAGGAGGTGACTGGGAA...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPLYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCTACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 4 (lower is better)
Translates to: HPVLQQLLLCFAGEAEGAYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...GGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCAGTCCTTTATAGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGCCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: SVLYRGCSQRECEASAGRPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...CCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCTATAAAGGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 4 (lower is better)
Translates to: DPINILIQALFPRGKLVSGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...GGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCAGACAGCAGAGATCCTaGAGAGAGGTGATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESARQQRS*REVIEE
Trigger: CTCTTCTATCACCTCTCTCCAGGATCTCTGCTGTCT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACTTGAGGGGATGGGCCTaGGGCTGTGGGATTAACCGT +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDLRGWA*GCGINR
Trigger: ACGGTTAATCCCACAGCCCCAGGCCCATCCCCTCAA...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGATTCCACCACGAGGCTaGCTTTGCCTCTGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQIPPRG*LCLCGG
Trigger: ACCTCCACAGAGGCAAAGTCAGCCTCGTGGTGGAAT...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR TCA 90 bp GAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCGAAACCGCTTGCAGCTaGCATCAGGGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: ELHSRPGAAWLSQTPSTSETACS*HQGAPQ
Trigger: CTGTGGAGCTCCCTGATGTCAGCTGCAAGCGGTTTC...GGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGAAGAATCCAACTAGCTaGTCCAGAAACCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQKNPTS*SRNRLQ
Trigger: CTGCAAGCGGTTTCTGGATCAGCTAGTTGGATTCTT...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACAAGAATCCAACTAGCTaGTCCAGAAACCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYKNPTS*SRNRLQ
Trigger: CTGCAAGCGGTTTCTGGATCAGCTAGTTGGATTCTT...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCGCAGTCCTGCGGGCCTaGTGCTCTCCAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTAAVLRA*CSPDHG
Trigger: GCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGC...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTGCAGTCCTGCGGGCCTaGTGCTCTCCAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: TSSPFSEARLLWYTSSMAAVLRA*CSPDHG
Trigger: GCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGC...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACTGTAGGAAGGCAAAATaGCCTGAGGCCATTTCCACT +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYCRKAK*PEAIST
Trigger: AGTGGAAATGGCCTCAGGTCATTTTGCCTTCCTACA...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTTGTAGGAAGGCAAAATaGCCTGAGGCCATTTCCACT +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPCRKAK*PEAIST
Trigger: AGTGGAAATGGCCTCAGGTCATTTTGCCTTCCTACA...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGGCTGCTGGAGGCGCTaGGAGATGCCTTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: SCWKYVSWMGLQQAYTAVGCWRR*EMPCSK
Trigger: CTTACTGCAAGGCATCTCTCAGCGCCTCCAGCAGCC...CACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTGAGGGGCCAGCACCCTaGCAGTTTGCTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: FHRPHQHPHPGLVPPWEAEGPAP*QFAEPE
Trigger: TTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTC...AGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RWTSSPFSEARLLWYTSSVSAWS*FHLQRG
Trigger: GCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACAC...AGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: RGCSQRECEASAGRSAECTAPAL*RSECRD
Trigger: ATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGT...GCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCATGCGGTCGTAATGTGTaGAGTTGTAGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TPCFSSFCFALPERLKAPCGRNV*SCRCCS
Trigger: CGAGCAGCACCTACAACTTCACACATTACGACCGCA...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCCCGTGGAGGCATTTCTaGCAGTCATTTCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPPWRHF*QSFHKA
Trigger: CGCTTTATGAAATGACTGTCAGAAATGCCTCCACGG...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCACTGAAGGCGCCATCCTaGGGGTTTGGGAAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: SWPDKHPFSFLPSGQASSLKAPS*GFGKPE
Trigger: CTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAG...TGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCTGACAGTCATTCTGAAGGCGCCATCCTaGGGGTTTGGGAAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: WMGLQQAYTAVEAFLTVILKAPS*GFGKPE
Trigger: CTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAG...AATGACTGTCAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTCTTTGCCGGAGAGGCTaGAGGCGCCATCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TSSPFSEARLLWYTSSMALCRRG*RRHPEG
Trigger: ACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAG...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: CAVSQQRLLSQQGQHQPFEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...AAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGACGAGGCGCCCACAATaGCTGCTCTTATTTGAAACA +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQTRRPQ*LLLFET
Trigger: TGTTTCAAATAAGAGCAGTCATTGTGGGCGCCTCGT...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402105.7
CDS-3UTR TCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCGGCACACCTGCAAAGTaGAGTTTCAGGACTTTACTT +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESAGTPAK*SFRTLL
Trigger: AAGTAAAGTCCTGAAACTTCACTTTGCAGGTGTGCC...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGAGGCTTTTCTGCCCTaGAGAGTCACTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWEAFLP*RVTRIC
Trigger: ACAGATTCTAGTGACTCTTCAGGGCAGAAAAGCCTC...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCACCTCCACTTTCCTTCTaGAGCACAATCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: TPCFSSFCFALPERLKAPPPLSF*STIPMV
Trigger: CACCATGGGGATTGTGCTTCAGAAGGAAAGTGGAGG...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCGGAAAGGGGTGCTGTaGGTGCATTCCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSRKGVL*VHSSAR
Trigger: CCTGGCTGAGGAATGCACTCACAGCACCCCTTTCCG...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR TCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCAATTGCAAAGCAATATaGACAGGACTTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: WRKRRSCGVATCGRFAISNCKAI*TGLSPE
Trigger: CTCAGGGGAAAGTCCTGTTCATATTGCTTTGCAATT...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCGGTGGCCATCTACTGTaGAGTCATCCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPGGHLL*SHPHSL
Trigger: AAGAGAATGAGGATGACTGCACAGTAGATGGCCACC...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR GCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGTCCTTTATAGAGGATaGAGCCAGCGAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWVLYRG*SQRECE
Trigger: CTCACATTCTCGCTGGCTGCATCCTCTATAAAGGAC...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGGTCCTTTATAGAGGATaGAGCCAGCGAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRVLYRG*SQRECE
Trigger: CTCACATTCTCGCTGGCTGCATCCTCTATAAAGGAC...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCGACATTCGGGGGCAATaGCGCTCCATGTTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LQIMARQASVLLPAIWTSDIRGQ*RSMFLR
Trigger: CCGCAGGAACATGGAGCGGCATTGCCCCCGAATGTC...GCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR GCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATAGAGTTGTGCAGTCCTaGGGGCCTGATGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDRVVQS*GPDALQ
Trigger: CTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCT...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACTGCTCTTGGGCTCCATaGTGGGTCAGCATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDCSWAP*WVSISG
Trigger: TCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCA...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGTGCTCTTGGGCTCCATaGTGGGTCAGCATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GQTSIRSPSCHLDKLRQGCSWAP*WVSISG
Trigger: TCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCA...CCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCAGTCCTTTATAGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SVLYRGCSQRECEASAGRGWSSS*SWAPCW
Trigger: CCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCC...CCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCTATAAAGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAGAGGGGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGTTGCTGAGCCTGAACTaGATTCCAGACCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QRGQHPDSLLSLNCIPDQLLSLN*IPDQGL
Trigger: CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAA...CTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCACCTGCGGCAGGTTTaGCATCAGCAAGCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGHLRQV*HQQALN
Trigger: ATTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTG...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCGCTGCAGGTGCCAGCTaGTGGAAATATGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WAASLSGGLPAHSVKPGCAAGAS*WKYVSW
Trigger: CCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGC...GCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCGCTCCGTGCTGCAGGTaGCAGCTGCTGGAAATATGT +
Preference number: 4 (lower is better)
Translates to: GAAWLSQTPSTSSSRPCSAPCCR*QLLEIC
Trigger: ACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGC...GGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACAGCAGCTTCTGCTTTaGTTTGCCGGAGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTQQLLL*FAGEAE
Trigger: TTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTG...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGTCCCGGCCCTGCTTCAGCAGCTTCTaGTTTGCTTTGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: MKYLRLSMAEREPSPSRPCFSSF*FALPER
Trigger: CCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCA...GGGCCGGGACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAGTGGTCTCCGTGTaGTGCCGCTTCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSQVVSV*CRFPAG
Trigger: TCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGAGAAAGGGGCACACCTaGAAAGTGAAGTTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRRKGHT*KVKFQD
Trigger: GTCCTGAAACTTCACTTTGCAGGTGTGCCCCTTTCT...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCCACAGGTTGCCAAACTaGACCTCGAACTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DPINILIQALFPRGKLVSHRLPN*TSNSWA
Trigger: GGCCCAGGAGTTCGAGGTGCAGTTTGGCAACCTGTG...GGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTAAAACAGGGATAATCTaGACATTCGGGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVKTGII*TFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTT...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAAAAACAGGGATAATCTaGACATTCGGGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLKTGII*TFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTT...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGTCCCGGCCCTCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: MKYLRLSMAEREPSPSRPSTGNS*RLMASS
Trigger: AGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA...GGGCCGGGACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGTGGGCTGAACCATCCTaGAGTCCTGCTGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQWAEPS*SPAGDA
Trigger: AGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCA...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTGGGTCAGCATGGGCTGAACCATCCTaGAGTCCTGCTGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: CYGQDGLRAALGLHAGSAWAEPS*SPAGDA
Trigger: AGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCA...TGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACATGTGGGATCTGGGGTaGTCCAGGCCATGGATTCCA +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDMWDLG*SRPWIP
Trigger: TGGAATCCATGGCCTGGACCACCCCAGATCCCACAT...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAGAGGGGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGATGTGGGATCTGGGGTaGTCCAGGCCATGGATTCCA +
Preference number: 4 (lower is better)
Translates to: QRGQHPDSLLSLNCIPDQMWDLG*SRPWIP
Trigger: TGGAATCCATGGCCTGGACCACCCCAGATCCCACAT...CTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCCTCCTTCCTGCCATCTaGACAAGCTTCGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: WGGPGHGFHMASGVFFQGLLPAI*TSFVRG
Trigger: TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAG...GCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCCAAGAACCTCACCCCTaGCAGAGTTGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: WAASLSGGLPAHSVKPGCQEPHP*QSCAVL
Trigger: CAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTG...GCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGCACTTCCTGAGCCTCTaGAATGTGGATTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLHFLSL*NVDFRQ
Trigger: TTGTCTGAAATCCACATTCCAGAGGCTCAGGAAGTG...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATTCTTCGAGCTGCTCTTaGGCTCCATGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDSSSCS*APCWVS
Trigger: GCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGA...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCCATAAGAGGTTGTGGTGCCCATTCCAGCAAGAACATGCTGCTTGGCTGTCCGGGTCTGCTCTGGGAATaGGGGCTTGGCTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: AIRGCGAHSSKNMLLGCPGLLWE*GLGCYG
Trigger: GCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACC...CGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAGCCTGCGGGTCCTTCTaGGGAGAGGGTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPACGSF*GEGLLW
Trigger: CCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGC...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATAGGCTGCCTCATCCCTaGGCAGCGTCTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDRLPHP*AASLSG
Trigger: ACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCT...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCATCAGGCTGACGGCCTaGAGGAAGCGGCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTAIRLTA*RKRRSC
Trigger: GCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGAT...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGAATATGTCTCCTGGATaGGGTTGCAACAGGCGTACA +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWENMSPG*GCNRRT
Trigger: TGTACGCCTGTTGCAACCCCATCCAGGAGACATATT...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACAATATGTCTCCTGGATaGGGTTGCAACAGGCGTACA +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYNMSPG*GCNRRT
Trigger: TGTACGCCTGTTGCAACCCCATCCAGGAGACATATT...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGTGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCG +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVWKYVS*MGLQQA
Trigger: CGCCTGTTGCAACCCCATCCAGGAGACATATTTCCA...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGGCCATCCTGAGGGTTTaGGAAGCCGGAGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: IPHGQWRFLSGQMCSHPLAILRV*EAGAPC
Trigger: GCACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGC...CAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTTCCATCTAGGCAGATaGGATCCAAGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEFHLGR*DPRDSR
Trigger: TCTGCTGTCTCTTGGATCCCATCTGCCTAGATGGAA...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTGAAACCGCTTGCAGCTaGCATCAGGGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSETACS*HQGAPQ
Trigger: CTGTGGAGCTCCCTGATGTCAGCTGCAAGCGGTTTC...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACTCAGAATTTGCTCGATaGAGGTGTCCCACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDSEFAR*RCPTPC
Trigger: GCACGGAGTGGGACACCTTCATCGAGCAAATTCTGA...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GCCTTACCCTCTCCCAATCACAATCTCCTGGCACTTGACCGAGCAGTCTCACAATGGATGGTGCTGGGCTaGACCATCCTGGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ALPSPNHNLLALDRAVSQWMVLG*TILESC
Trigger: GCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCA...TTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTGTGATTGGGAGAGGGTAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR TCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGTCCCCAGGGAGGAGCTaGGGCCAAGAACCTCACCCC +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKSPGRS*GQEPHP
Trigger: GGGGTGAGGTTCTTGGCCTCAGCTCCTCCCTGGGGA...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGCCATTTCCACTTCCTaGGCCTCTGGAATGTGGATT +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDAISTS*ASGMWI
Trigger: AATCCACATTCCAGAGGCTCAGGAAGTGGAAATGGC...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGCGTGGCGAAGGCAAAATGACCTaGGGCCATTTCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: HPDSLLSLNCIPDQGLRGEGKMT*GHFHFL
Trigger: CAGGAAGTGGAAATGGCCTCAGGTCATTTTGCCTTC...GCCACGCAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATTGGTCCTGTTGTCACTaGATTCTCAGGGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PHPGLVPPWEACFLSVLDWSCCH*ILRAQP
Trigger: GGGCTGAGCCCTGAGAATTCAGTGACAACAGGACCA...ATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGGTTAATCCAGGTGCATaGGACTTTTCCATATACACG +
Preference number: 4 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPVNPGA*DFSIYT
Trigger: CGTGTATATGGAAAAGTCTCATGCACCTGGATTAAC...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAAGAGCGCTGGCAGGTCTaGAGAATGCGGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQERWQV*RMRAAF
Trigger: GAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTC...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGCTTTCAGGGCAGATGTaGTCCCACCCTTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: GQTSIRSPSCHLDKLRQGLSGQM*SHPLDG
Trigger: ACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAG...CCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACATCCGTTCTCCTTCCTaGCATCTGGACAAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDIRSPS*HLDKLR
Trigger: ACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGAT...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCAATCCGTTCTCCTTCCTaGCATCTGGACAAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: TPCFSSFCFALPERLKAPIRSPS*HLDKLR
Trigger: ACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGAT...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACTGCAGTAAGGAGCCCTaGCATCTGGAACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDCSKEP*HLEQAH
Trigger: ATGTGCCTGTTCCAGATGGCAGGGCTCCTTACTGCA...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCAGTCCTTTATAGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTTGCTGAGCCTGAACTaGATTCCAGACCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SVLYRGCSQRECEASAGRLLSLN*IPDQGL
Trigger: CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAA...CCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCTATAAAGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTCCTCTATGGCTaGGCTGTCTCCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTAHFLYG*AVSQQR
Trigger: CCGCTGCTGGGAGACAGCGCAGCCATAGAGGAAGTG...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLAARGG*LIPGQR
Trigger: ACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGC...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGCACCTGCGGCAGGTTTaGCATCAGCAAGCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQHLRQV*HQQALN
Trigger: ATTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTG...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGAGCAAGTTCACCCCGTaGTTCAGCAGCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLSKFTP*FSSFCF
Trigger: AAAGCAGAAGCTGCTGAAGCACGGGGTGAACTTGCT...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGTCCCGGCCCAGCAAGTTCACCCCGTaGTTCAGCAGCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: MKYLRLSMAEREPSPSRPSKFTP*FSSFCF
Trigger: AAAGCAGAAGCTGCTGAAGCACGGGGTGAACTTGCT...GGGCCGGGACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGCGGCGATCCTGCAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: LGKFAMHQADGLEEAAILQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...CAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGAGATGCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: GDARDLVICSTGNSWRLMGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...CATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGGGTACCTGCGACTTCTaGCCCGTACCTGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVGTCDF*PVPARA
Trigger: CGCGCGCGCAGGTACGGGGCAGAAGTCGCAGGTACC...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp AGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTGGGCTCGGAAAGGGGTaGTGTGAGTGCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RWTSSPFSEARLLWYTSSGLGKG*CECIPQ
Trigger: CTGAGGAATGCACTCACAGCACCCCTTTCCGAGCCC...AGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCAAACATCAGTGCCTTaGCTCTGCGCGCGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTAQTSVP*LCARGR
Trigger: TCTGCCGCGCGCGCAGAGCCAAGGCACTGATGTTTG...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336873.9
ENST00000439453.5
CDS-3UTR CCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCAATGCCAGCTCTTGTTaGATCGCCTTCTTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTNASSC*IAFFLY
Trigger: GTAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATT...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGTCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQSTGNS*RLMASS
Trigger: AGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGTCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GQTSIRSPSCHLDKLRQGSTGNS*RLMASS
Trigger: AGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA...CCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACAATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTIPHGQ*RFLSGQ
Trigger: CTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGTCCCGGCCCATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: MKYLRLSMAEREPSPSRPIPHGQ*RFLSGQ
Trigger: CTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT...GGGCCGGGACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTALRQGM*DLGWSR
Trigger: CCTGGACCACCCCAGATCCCACATCCCCTGACGAAG...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCCTCCTTCCTGCCATCTaGACAAGCTTCGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: CCRCQLLEICLLDGVATGLLPAI*TSFVRG
Trigger: TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAG...GCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTC +
Preference number: 4 (lower is better)
Translates to: GQHPDSLLSLNCIPDQGLMLSRS*PDKHPF
Trigger: GAACGGATGCTTGTCTGGCCATGATCTGGAGAGCAT...CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCAAGAACCTCACCCCTaGCAGAGTTGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PHPGLVPPWEACFLSVLDQEPHP*QSCAVL
Trigger: CAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTG...ATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACACTTCCTGAGCCTCTaGAATGTGGATTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLHFLSL*NVDFRQ
Trigger: TTGTCTGAAATCCACATTCCAGAGGCTCAGGAAGTG...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGCACTTCCTGAGCCTCTaGAATGTGGATTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWHFLSL*NVDFRQ
Trigger: TTGTCTGAAATCCACATTCCAGAGGCTCAGGAAGTG...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCACTTCCTGAGCCTCTaGAATGTGGATTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: VGVESACSQIRHLAVQSHHFLSL*NVDFRQ
Trigger: TTGTCTGAAATCCACATTCCAGAGGCTCAGGAAGTG...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACTTCCTGAGCCTCTaGAATGTGGATTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAHFLSL*NVDFRQ
Trigger: TTGTCTGAAATCCACATTCCAGAGGCTCAGGAAGTG...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTTCTTCGAGCTGCTCTTaGGCTCCATGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSSSSCS*APCWVS
Trigger: GCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGA...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTCTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: CGPDALQIMARQASVLLPLLWPG*SSSCSW
Trigger: CCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAG...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCAGTCCTTTATAGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGGGTACACTTCCTCTATaGCTGCGCTGTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVLYRGCSQRECEASAGRGTLPL*LRCLPA
Trigger: TGCTGGGAGACAGCGCAGCCATAGAGGAAGTGTACC...CCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCTATAAAGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATGGTACACTTCCTCTATaGCTGCGCTGTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PHPGLVPPWEACFLSVLDGTLPL*LRCLPA
Trigger: TGCTGGGAGACAGCGCAGCCATAGAGGAAGTGTACC...ATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGTCCCGGCCCAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGT +
Preference number: 4 (lower is better)
Translates to: MKYLRLSMAEREPSPSRPSVSFR*TSSPFS
Trigger: ACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCT...GGGCCGGGACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGAGGCTGCCTCATCCCTaGGCAGCGTCTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VPAAGNMSPGWGCNRRTQRLPHP*AASLSG
Trigger: ACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCT...CTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGTGTAGGTGCTGCTCGTaGAGGCTGCCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: IPHGQWRFLSGQMCSHPLCRCCS*RLPHPW
Trigger: CCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACA...CAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGTTCCCAGTCACCTCCTaGGTGCAGTTCAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQFPVTS*VQFRAS
Trigger: ACTTGCTCTGAACTGCACCCAGGAGGTGACTGGGAA...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGCAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTATTGAAAGCCTTCAGGTaGCCCCAGAGAATAAAGAAC +
Preference number: 4 (lower is better)
Translates to: VESACSQIRHLAVQSHRLLKAFR*PQRIKN
Trigger: GTTCTTTATTCTCTGGGGCCACCTGAAGGCTTTCAA...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402105.7
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGTCCTGCACACTGCCTTCCCTTGGGAAACATGGCCATAAGAGGTTGTGGTGCTCGCTGGCCTGGTACTaGGGACCACTGGTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LSCTLPSLGKHGHKRLWCSLAWY*GPLVKD
Trigger: GTCTTTGACCAGTGGTCCCCAGTACCAGGCCAGCGA...GCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGCAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCCAAGAACATGCTGCTTaGCTGTCCGTCGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPQEHAA*LSVAWP
Trigger: GGGCCAAGCGACGGACAGCCAAGCAGCATGTTCTTG...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGTTGTACAGAACAGCTaGACAGGGTGTAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSVVQNS*TGCSSK
Trigger: CTTTGAGCTACACCCTGTCCAGCTGTTCTGTACAAC...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
3UTR CAA 72 bp GGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCCGTGGAGGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: GASCWKYVSWMG*QQAYTAVEAFL
Trigger: CAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACAAGAATCCAACTAGCTaGTCCAGAAACCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDKNPTS*SRNRLQ
Trigger: CTGCAAGCGGTTTCTGGATCAGCTAGTTGGATTCTT...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGCAGTCCTGCGGGCCTaGTGCTCTCCAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKAVLRA*CSPDHG
Trigger: GCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGC...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGACAGCACCAGCCCTTTaGCGCAGTGAGTGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: AGNMSPGWGCNRRTQPWRTAPAL*RSECRD
Trigger: ATCTCTACACTCACTGCGTCAAAGGGCTGGTGCTGT...CCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCTGGTCCTGTTGTCACTaGATTCTCAGGGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIWSCCH*ILRAQP
Trigger: GGGCTGAGCCCTGAGAATTCAGTGACAACAGGACCA...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CTGAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATTGGTCCTGTTGTCACTaGATTCTCAGGGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LNCIPDQGLRGFHRPHQHWSCCH*ILRAQP
Trigger: GGGCTGAGCCCTGAGAATTCAGTGACAACAGGACCA...ATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCGCTTATTACTGTGTTTaGAAGCCTTCAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: WGGPGHGFHMASGVFFQGAYYCV*KPSGGP
Trigger: GGGGCCACCTGAAGGCTTTCAAACACAGTAATAAGC...GCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR TCA 90 bp GGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGCAATCTCCTGGCACTTaGCCGAGCAGTCTCACAATA +
Preference number: 4 (lower is better)
Translates to: GQTSIRSPSCHLDKLRQGQSPGT*PSSLTI
Trigger: TATTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTG...CCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR TCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCATAGCTGCACTGGCGTaGTGCATCCAACCCACACGT +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPIAALA*CIQPTR
Trigger: ACGTGTGGGTTGGATGCATCACGCCAGTGCAGCTAT...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR GCA 90 bp TGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTGGGTCAGCAGCCAAAAGTGGGAGATaGATGCTAGAGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: CYGQDGLRAALGLHAGSAAKSGR*MLELVF
Trigger: GAACACCAGCTCTAGCATGCATCTCCCACTTTTGGC...TGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR GCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTCATGTATATTTCCATaGCTCTTACAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESASCIFP*LLQLRE
Trigger: CTCCCTGAGTTGTAAGAGGCATGGAAATATACATGA...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR GCA 90 bp AGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGTGGCCATCTACTGTaGAGTCATCCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: RGCSQRECEASAGRSAECGGHLL*SHPHSL
Trigger: AAGAGAATGAGGATGACTGCACAGTAGATGGCCACC...GCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR GCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGATAAAAGTAACAAATaGCAGCTCTTGTTGGATCGC +
Preference number: 4 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLDKSNK*QLLLDR
Trigger: GCGATCCAACAAGAGCTGGCATTTGTTACTTTTATC...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGAAGGTGTCCCACTCCGTaGTCAGTTCTTCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ARQASVLLPAIWTSFVRGRCPTP*SVLPEN
Trigger: GTTCTCAGGAAGAACTGAGCACGGAGTGGGACACCT...TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATAGGTGTCCCACTCCGTaGTCAGTTCTTCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDRCPTP*SVLPEN
Trigger: GTTCTCAGGAAGAACTGAGCACGGAGTGGGACACCT...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAGCGCTGGCAGGTCTaGAGAATGCGGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLERWQV*RMRAAF
Trigger: GAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTC...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCGTCCCGGCCCGTCCTTTATAGAGGATaGAGCCAGCGAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: MKYLRLSMAEREPSPSRPVLYRG*SQRECE
Trigger: CTCACATTCTCGCTGGCTGCATCCTCTATAAAGGAC...GGGCCGGGACGGGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCAGTCCTTTATAGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCAGGCTTTCAGGGCAGATGTaGTCCCACCCTTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: SVLYRGCSQRECEASAGRLSGQM*SHPLDG
Trigger: ACCATCCAAAGGGTGGGAGCACATCTGCCCTGAAAG...CCTGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCTATAAAGGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAGAGGGGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGATCCGTTCTCCTTCCTaGCATCTGGACAAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QRGQHPDSLLSLNCIPDQIRSPS*HLDKLR
Trigger: ACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGAT...CTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCTGCTCTTGGGCTCCATaGTGGGTCAGCATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSCSWAP*WVSISG
Trigger: TCCTGAGATGCTGACCCAGCATGGAGCCCAAGAGCA...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCTTGCTGAGCCTGAACTaGATTCCAGACCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTILLSLN*IPDQGL
Trigger: CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAA...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCTAAGCGAGGCAATAACAAGCCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PVGSLFPLCPGSKRGNNKPHAGL*WCQPGA
Trigger: AGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG...CTTGTTATTGCCTCGCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGTCAGTGAAGCCAGGCTaGTGTGGTACACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: GQTSIRSPSCHLDKLRQGSVKPG*CGTLPL
Trigger: TAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGA...CCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGCTGCTCGTGGAGGCTaGCTCATCCCTGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREAARGG*LIPGQR
Trigger: ACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAGC...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTTGGGCAAATTCGCTATaGATCAGGCTGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSWANSL*IRLTAW
Trigger: CCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCA...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGGCTGCAGGTGCCAGCTaGTGGAAATATGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VPAAGNMSPGWGCNRRTQAAGAS*WKYVSW
Trigger: CCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGC...CTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTGAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATGCTGCAGGTGCCAGCTaGTGGAAATATGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LNCIPDQGLRGFHRPHQHAAGAS*WKYVSW
Trigger: CCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGC...ATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTGCTCCGTGCTGCAGGTaGCAGCTGCTGGAAATATGT +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSAPCCR*QLLEIC
Trigger: ACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGC...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALGVESA*SQIRHL
Trigger: GAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCC...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTTTCCAGCCAGGACACAGGTTaGCAAACTGCACCTCGAACT +
Preference number: 4 (lower is better)
Translates to: DPINILIQALFPRGKLVSSQDTG*QTAPRT
Trigger: AGTTCGAGGTGCAGTTTGGCAACCTGTGTCCTGGCT...GGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGAGTTTTCACTCAGCATaGAAAGTTCCACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRSFHSA*KVPLPF
Trigger: GAAGGGAAGTGGAACTTTCCATGCTGAGTGAAAACT...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCAGTTTTCACTCAGCATaGAAAGTTCCACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTSFHSA*KVPLPF
Trigger: GAAGGGAAGTGGAACTTTCCATGCTGAGTGAAAACT...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGGGCTCCACTTTAGTTTaGTCCAAGTTCCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGGSTLV*SKFQRE
Trigger: TTCCCTCTGGAACTTGGACCAAACTAAAGTGGAGCC...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
CDS-3UTR CCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACAGGCTCCACTTTAGTTTaGTCCAAGTTCCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTGSTLV*SKFQRE
Trigger: TTCCCTCTGGAACTTGGACCAAACTAAAGTGGAGCC...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
CDS-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGAAAACAGGGATAATCTaGACATTCGGGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLKTGII*TFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTT...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCCCCTTTGGATGGTGCTaGGCTGAACCATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPPFGWC*AEPSWS
Trigger: ACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGG...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
56% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCCCTTTGGATGGTGCTaGGCTGAACCATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSPFGWC*AEPSWS
Trigger: ACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGG...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTC +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQMLSRS*PDKHPF
Trigger: GAACGGATGCTTGTCTGGCCATGATCTGGAGAGCAT...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAGAGGGGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTC +
Preference number: 4 (lower is better)
Translates to: QRGQHPDSLLSLNCIPDQMLSRS*PDKHPF
Trigger: GAACGGATGCTTGTCTGGCCATGATCTGGAGAGCAT...CTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESAKSSSS*RKTSSF
Trigger: GAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGCACTTCCTGAGCCTCTaGAATGTGGATTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVHFLSL*NVDFRQ
Trigger: TTGTCTGAAATCCACATTCCAGAGGCTCAGGAAGTG...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCGGCCTTGTTCCCCCGTaGGAAGCTTGTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LQIMARQASVLLPAIWTSGLVPP*EACFLS
Trigger: AGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCC...GCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIHAGLC*CQPGAD
Trigger: ATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATG...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGGTGGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTCATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RWTSSPFSEARLLWYTSSHAGLC*CQPGAD
Trigger: ATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATG...AGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTGGTACACTTCCTCTATaGCTGCGCTGTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSGTLPL*LRCLPA
Trigger: TGCTGGGAGACAGCGCAGCCATAGAGGAAGTGTACC...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGAGATGCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGTGTAGGTGCTGCTCGTaGAGGCTGCCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: GDARDLVICSTGNSWRLMCRCCS*RLPHPW
Trigger: CCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACA...CATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGATCAGGCTGACGGCCTaGAGGAAGCGGCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALIRLTA*RKRRSC
Trigger: GCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGAT...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCAAATATGTCTCCTGGATaGGGTTGCAACAGGCGTACA +
Preference number: 4 (lower is better)
Translates to: TPCFSSFCFALPERLKAPNMSPG*GCNRRT
Trigger: TGTACGCCTGTTGCAACCCCATCCAGGAGACATATT...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCACCCCTGGCAGAGTTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGCTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LTPGRVVQSCGPDALQIMLYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...CATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCACCCTTTGACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: IPHGQWRFLSGQMCSHPLTSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...CAAAGGGTGGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 4 (lower is better)
Translates to: TRACGSFWGEGLLWEWGLQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...AAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGCAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQHPDSLLSLNCIPDQGLQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGCGGCGATCCTGCAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGKFAMHQADGLEEAAILQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...CAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAAACCTACCTGCGGCGTaGGAGTGGAGTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLNLPAA*EWSRPA
Trigger: AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTT...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCAAAAATAATTCCACCTaGCAAGAGAACAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESAKNNST*QENRVE
Trigger: CTCCACTCTGTTCTCTTGCCAGGTGGAATTATTTTT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402105.7
ENST00000429411.5
ENST00000464362.5
3UTR CAA 72 bp GCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTaGTTCCCCCGTGGGAAGCTTGTTTCCTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AFTDPINILIQA*FPRGKLVSSLS
Trigger: GGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACTCAGAATTTGCTCGATaGAGGTGTCCCACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNSEFAR*RCPTPC
Trigger: GCACGGAGTGGGACACCTTCATCGAGCAAATTCTGA...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGAGTTCCAGAGGGAATTaGAAATCTTATGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQESSRGN*KSYADH
Trigger: GTGATCTGCATAAGATTTTCAATTCCCTCTGGAACT...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTTCCCCAGGGAGGAGCTaGGGCCAAGAACCTCACCCC +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLASPGRS*GQEPHP
Trigger: GGGGTGAGGTTCTTGGCCTCAGCTCCTCCCTGGGGA...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGGCTGCTGGAGGCGCTaGGAGATGCCTTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKGCWRR*EMPCSK
Trigger: CTTACTGCAAGGCATCTCTCAGCGCCTCCAGCAGCC...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGGAGGGCGCAAGCTGCTaGTGGCTGTGTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKEGASC*WLCPQE
Trigger: CTCCTGAGGACACAGCCATCAGCAGCTTGCGCCCTC...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGAGGGGCCAGCACCCTaGCAGTTTGCTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALEGPAP*QFAEPE
Trigger: TTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTC...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCTGCGGTCGTAATGTGTaGAGTTGTAGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTICGRNV*SCRCCS
Trigger: CGAGCAGCACCTACAACTTCACACATTACGACCGCA...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTGGGTCAGCACCGTGGAGGCATTTCTaGCAGTCATTTCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: CYGQDGLRAALGLHAGSAPWRHF*QSFHKA
Trigger: CGCTTTATGAAATGACTGTCAGAAATGCCTCCACGG...TGCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGCTTTGCCGGAGAGGCTaGAGGCGCCATCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVLCRRG*RRHPEG
Trigger: ACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAG...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCTCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: ELHSRPGAAWLSQTPSTSSRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...GGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTTCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: CGPDALQIMARQASVLLPSRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTTTTCAGTCACAACTaGCACTTGGTTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: RTSQQERTGETYLRRGSGVFSHN*HLVSFH
Trigger: GTGAAAACTAACCAAGTGGCAGTTGTGACTGAAAAC...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR GCA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGGTTTTCAGTCACAACTaGCACTTGGTTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEVFSHN*HLVSFH
Trigger: GTGAAAACTAACCAAGTGGCAGTTGTGACTGAAAAC...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR GCA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTGATAAAAGTAACAAATaGCAGCTCTTGTTGGATCGC +
Preference number: 4 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPDKSNK*QLLLDR
Trigger: GCGATCCAACAAGAGCTGGCATTTGTTACTTTTATC...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCGATAAAAGTAACAAATaGCAGCTCTTGTTGGATCGC +
Preference number: 4 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTDKSNK*QLLLDR
Trigger: GCGATCCAACAAGAGCTGGCATTTGTTACTTTTATC...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGGATAAAAGTAACAAATaGCAGCTCTTGTTGGATCGC +
Preference number: 4 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQDKSNK*QLLLDR
Trigger: GCGATCCAACAAGAGCTGGCATTTGTTACTTTTATC...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCTCTCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTASLLLR*CSVKQD
Trigger: GTCCTGCTTCACCGAACAGCACCTCAGGAGCAGAGA...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTTCTCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TSSPFSEARLLWYTSSMASLLLR*CSVKQD
Trigger: GTCCTGCTTCACCGAACAGCACCTCAGGAGCAGAGA...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGGCCGCTCCATGTTCCTaGGGGGCATCCTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVAAPCS*GASSPV
Trigger: TACGGGAGAGGATGCCCCGCAGGAACATGGAGCGGC...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000439453.5
CDS-3UTR GCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACTGCAGTAAGGAGCCCTaGCATCTGGAACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNCSKEP*HLEQAH
Trigger: ATGTGCCTGTTCCAGATGGCAGGGCTCCTTACTGCA...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGTCTGGGGAGAGGGTCTaGTCTGGGAATGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALSGERV*SGNGGL
Trigger: CAAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGA...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAAGCAATAACAAGGGCCTaGGGGTCCTTCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQAITRA*GSFWGE
Trigger: CTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKPHAGL*WCQPGA
Trigger: AGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTGGGCAAATTCGCTATaGATCAGGCTGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EICLLDGVATGVHSRGGIWANSL*IRLTAW
Trigger: CCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCA...AATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGATCCGGCACCTCGCTGTaGAGTCACACCGCCTACCAC +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRSGTSL*SHTAYH
Trigger: GTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGTCCGGCACCTCGCTGTaGAGTCACACCGCCTACCAC +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVSGTSL*SHTAYH
Trigger: GTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 4 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGGTGGTCTCCGTGTGCTaGCGCTTCCCTGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVVVSVC*RFPAGT
Trigger: CGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCAC...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCCATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGCATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGCAAATATTTTCATCCTaGAGTCTGTCTCATACTGTC +
Preference number: 4 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLQIFSS*SLSHTV
Trigger: GACAGTATGAGACAGACTGCAGGATGAAAATATTTG...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAAGGAAAAGAGGGATaGGCCCACGTTACGCGCGCG +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLEGKEG*AHVTRA
Trigger: CGCGCGCGTAACGTGGGCGCATCCCTCTTTTCCTTC...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGGCTTCCGACATTCGGGGGCAATaGCGCTCCATTAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ARDLVICSTGNSWRLMASDIRGQ*RSIRVL
Trigger: CAGAACCCTAATGGAGCGGCATTGCCCCCGAATGTC...GGAAGCCATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429411.5
CDS-3UTR GCA 90 bp GCCTTACCCTCTCCCAATCACAATCTCCTGGCACTTGACCGAGCAGTCTCACAAAAGGGGTGCTGTGAGTaGATTCCTCAGCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: ALPSPNHNLLALDRAVSQKGCCE*IPQPGH
Trigger: GTGTCCTGGCTGAGGAATGCACTCACAGCACCCCTT...TTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTGTGATTGGGAGAGGGTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGAGGAAGCGGCGATCCTGCGGGGTGGCCACCTGCGGCAGGTTTGCCATCAGCCTCCATCAACTTTTATaGCAAACTTCAGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: WRKRRSCGVATCGRFAISLHQLL*QTSVFS
Trigger: TGAGAAAACTGAAGTTTGCCATAAAAGTTGATGGAG...GCTGATGGCAAACCTGCCGCAGGTGGCCACCCCGCAGGATCGCCGCTTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGGAGGGCGGGAGTTaGGTGCTGACAATCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPREGGS*VLTISP
Trigger: AGGACTGATTGTCAGCACCCAACTCCCGCCCTCCCT...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGGTGGTCCAGGCCATaGATTCCACATGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALGWSRP*IPHGQW
Trigger: CCACTGGCCATGTGGAATCCATGGCCTGGACCACCC...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVLRQGM*DLGWSR
Trigger: CCTGGACCACCCCAGATCCCACATCCCCTGACGAAG...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTCAAGAACCTCACCCCTaGCAGAGTTGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TSSPFSEARLLWYTSSMAQEPHP*QSCAVL
Trigger: CAGGACTGCACAACTCTGCCAGGGGTGAGGTTCTTG...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEKSSSS*RKTSSF
Trigger: GAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTT...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AATCAGTCCTTTATAGAGGATGCAGCCAGCGAGAATGTGAGGCGAGCGCTGGCATCTTGGGCTCCATGCTaGGTCAGCATCTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: NQSFIEDAASENVRRALASWAPC*VSISGA
Trigger: TGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGA...TGCCAGCGCTCGCCTCACATTCTCGCTGGCTGCATCCTCTATAAAGGACTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTGGGAATGGGGGCTTaGCTGCTATGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVLGMGA*LLWPGW
Trigger: CCATCCTGGCCATAGCAGCCAAGCCCCCATTCCCAG...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAGATGTGCTCCCTGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCG +
Preference number: 4 (lower is better)
Translates to: GHGFHMASGVFFQGRCAPWKYVS*MGLQQA
Trigger: CGCCTGTTGCAACCCCATCCAGGAGACATATTTCCA...GGGAGCACATCTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACTTCCCAGTCACCTCCTaGGTGCAGTTCAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNFPVTS*VQFRAS
Trigger: ACTTGCTCTGAACTGCACCCAGGAGGTGACTGGGAA...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCCAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WGGPGHGFHMASGVFFQGQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...GCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTTACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGAGAAGTCCTTTAGTTTaGTCCAAGTTCCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKRSPLV*SKFQRE
Trigger: TTCCCTCTGGAACTTGGACCAAACTAAAGGACTTCT...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CAA 72 bp ACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTaGTTTCCTCTCTGTCCTGGATCTAAGCGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: TSSSRPCSPVGS*FPLCPGSKRGN
Trigger: ATTGCCTCGCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTAAGAATCCAACTAGCTaGTCCAGAAACCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CGPDALQIMARQASVLLPKNPTS*SRNRLQ
Trigger: CTGCAAGCGGTTTCTGGATCAGCTAGTTGGATTCTT...AGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGAGTTCCAGAGGGAATTaGAAATCTTATGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVSSRGN*KSYADH
Trigger: GTGATCTGCATAAGATTTTCAATTCCCTCTGGAACT...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGTGGATGGTGCTGGGCTaGACCATCCTGGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREWMVLG*TILESC
Trigger: GCAGGACTCCAGGATGGTTCAGCCCAGCACCATCCA...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCGCCATTTCCACTTCCTaGGCCTCTGGAATGTGGATT +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPAISTS*ASGMWI
Trigger: AATCCACATTCCAGAGGCTCAGGAAGTGGAAATGGC...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCGAAGGCAAAATGACCTaGGGCCATTTCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPEGKMT*GHFHFL
Trigger: CAGGAAGTGGAAATGGCCTCAGGTCATTTTGCCTTC...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGTGTCAGCCTGGAGCTaGTTCCATCTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREVSAWS*FHLQRG
Trigger: GCCCCTCTGCAGATGGAATCAGCTCCAGGCTGACAC...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCTGCGGTCGTAATGTGTaGAGTTGTAGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTACGRNV*SCRCCS
Trigger: CGAGCAGCACCTACAACTTCACACATTACGACCGCA...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTTGCGGTCGTAATGTGTaGAGTTGTAGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TSSPFSEARLLWYTSSMACGRNV*SCRCCS
Trigger: CGAGCAGCACCTACAACTTCACACATTACGACCGCA...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCTGAAGGCGCCATCCTaGGGGTTTGGGAAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLALKAPS*GFGKPE
Trigger: CTCCGGCTTCCCAAACCCTCAGGATGGCGCCTTCAG...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCAGGAACACACAGCTaGGTGTCGCTCCCTTTCACG +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKPGTHS*VSLPFT
Trigger: CGTGAAAGGGAGCGACACTCAGCTGTGTGTTCCTGG...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCAGTTCAAACATCAGTaGCTTGGCTCTGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKQFKHQ*LGSARA
Trigger: CGCGCGCGCAGAGCCAAGGCACTGATGTTTGAACTG...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336873.9
ENST00000439453.5
CDS-3UTR GCA 90 bp TCCTGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTGTCCTTTATAGAGGATaGAGCCAGCGAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: SCGPDALQIMARQASVLLVLYRG*SQRECE
Trigger: CTCACATTCTCGCTGGCTGCATCCTCTATAAAGGAC...AAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCCACCCTTTGGATGGTaGTGGGCTGAACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKPPFGW*WAEPSW
Trigger: CCAGGATGGTTCAGCCCAGCACCATCCAAAGGGTGG...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGGGATGGTCTTCGAGCTaGTCTTGGGCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVGWSSS*SWAPCW
Trigger: CCAGCATGGAGCCCAAGAGCAGCTCGAAGACCATCC...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGGGAGCTGATTCCATCTaGAGAGGGGCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVGADSI*RGASTL
Trigger: CAGGGTGCTGGCCCCTCTGCAGATGGAATCAGCTCC...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGCCCCATGCAGGACTCTaGTGGTGTCAGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREPHAGL*WCQPGA
Trigger: AGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGG...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGTCCTCACGAGCCCCATaGAGGACTCTGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKSSRAP*RTLLVS
Trigger: TGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGA...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAATGGGCAAATTCGCTATaGATCAGGCTGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQWANSL*IRLTAW
Trigger: CCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCA...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCATCTGCTTCAGCAGCTTCTaGTTTGCTTTGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: NAVVMCEVVGAARGGCLICFSSF*FALPER
Trigger: CCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCA...GATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACGTGCTGCCGCTTCCCTaGAGGAACGATCCGGACCTC +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNVLPLP*RNDPDL
Trigger: GAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCAC...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACGTGGTCTCCGTGTGCTaGCGCTTCCCTGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNVVSVC*RFPAGT
Trigger: CGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCAC...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGGCTGCCTTCAGCAACATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: ENVRRALAGLQNAGCLQQHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...TTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCCAAATATTTTCATCCTaGAGTCTGTCTCATACTGTC +
Preference number: 4 (lower is better)
Translates to: TKWSPCAAASLQERSGPPQIFSS*SLSHTV
Trigger: GACAGTATGAGACAGACTGCAGGATGAAAATATTTG...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTACTTACCATGTTCCTaGGGGGCATCCTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: EICLLDGVATGVHSRGGIYLPCS*GASSPV
Trigger: TACGGGAGAGGATGCCCCGCAGGAACATGGTAAGTA...AATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCCTCAAGAGGCAACCATaGGCCTCACTACTTACCATG +
Preference number: 4 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSLKRQP*ASLLTM
Trigger: CATGGTAAGTAGTGAGGCGCATGGTTGCCTCTTGAG...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR GCA 90 bp TGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGCTAAGAAAGGGATCTaGTCCAACTCAGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CCRCQLLEICLLDGVATGAKKGI*SNSGFR
Trigger: TCTGAAGCCTGAGTTGGAGCAGATCCCTTTCTTAGC...GCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACAGTCACAACTGCCACTTaGTTAGTTTTCACTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LAVQSHRLPPPGVGVEHTVTTAT*LVFTQH
Trigger: ATGCTGAGTGAAAACTAACCAAGTGGCAGTTGTGAC...TGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGAATGCCAGCTCTTGTTaGATCGCCTTCTTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQNASSC*IAFFLY
Trigger: GTAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATT...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGCTCCATCAACTTTTATaGCAAACTTCAGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLLHQLL*QTSVFS
Trigger: TGAGAAAACTGAAGTTTGCCATAAAAGTTGATGGAG...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTCTCCATCAACTTTTATaGCAAACTTCAGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: CAVSQQRLLSQQGQHQPFLHQLL*QTSVFS
Trigger: TGAGAAAACTGAAGTTTGCCATAAAAGTTGATGGAG...AAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATAAAACAGGGATAATCTaGACATTCGGGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDKTGII*TFGGNA
Trigger: GGCATTGCCCCCGAATGTCCAGATTATCCCTGTTTT...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCTCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTASTGNS*RLMASS
Trigger: AGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPIPHGQ*RFLSGQ
Trigger: CTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCATTCCACATGGCCAGTaGCGTTTTCTTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSIPHGQ*RFLSGQ
Trigger: CTGCCCTGAAAGAAAACGCCACTGGCCATGTGGAAT...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCCATAAGAGGTTGTGGTGCCCATTCCAGCAAGAACATGCTGCTTGGCTGTCCGGCCATGGATTCCACATaGCCAGTGGCGTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: AIRGCGAHSSKNMLLGCPAMDST*PVAFSF
Trigger: GAAAGAAAACGCCACTGGCCATGTGGAATCCATGGC...CGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAELRQGM*DLGWSR
Trigger: CCTGGACCACCCCAGATCCCACATCCCCTGACGAAG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGGTCTGCTCTGGGAATaGGGGCTTGGCTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREGLLWE*GLGCYG
Trigger: GCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACC...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGGGTCTGCTCTGGGAATaGGGGCTTGGCTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVGLLWE*GLGCYG
Trigger: GCCATAGCAGCCAAGCCCCCATTCCCAGAGCAGACC...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGAGATGCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGGGTACACTTCCTCTATaGCTGCGCTGTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GDARDLVICSTGNSWRLMGTLPL*LRCLPA
Trigger: TGCTGGGAGACAGCGCAGCCATAGAGGAAGTGTACC...CATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGT +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTISVSFR*TSSPFS
Trigger: ACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCT...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGTGTAGGTGCTGCTCGTaGAGGCTGCCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVCRCCS*RLPHPW
Trigger: CCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACA...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGTGTAGGTGCTGCTCGTaGAGGCTGCCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAECRCCS*RLPHPW
Trigger: CCAGGGATGAGGCAGCCTCCACGAGCAGCACCTACA...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATTGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCG +
Preference number: 4 (lower is better)
Translates to: LNCIPDQGLRGFHRPHQHWKYVS*MGLQQA
Trigger: CGCCTGTTGCAACCCCATCCAGGAGACATATTTCCA...ATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDLYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLTSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGCCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGCCAGCAAGAGCGCACTaGAGAAACCTACCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKPARAH*RNLPAA
Trigger: CGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGG...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAGGCTTGCCCCCATTGTaGGTCCAAAGAAGACGCCCC +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRGLPPL*VQRRRP
Trigger: GGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCC...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PSKSALEKPTCGVGVESANTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACAAATGACATTATAAAGTTGTCTTCGCTGGCCTGGTACTGGGGACCACTGGTCTGGATCAGCTGCAGCTaGTGCTCCCTGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TNDIIKLSSLAWYWGPLVWISCS*CSLEQQ
Trigger: CTGCTGCTCCAGGGAGCACCAGCTGCAGCTGATCCA...GACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAACTTTATAATGTCATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGATTGCGGGGACTTCCTaGAGCTGCAGCAACCACAGC +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVIAGTS*SCSNHS
Trigger: GCTGTGGTTGCTGCAGCTCCAGGAAGTCCCCGCAAT...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp CTCACCCCTGGCAGAGTTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGCTCAAAGCTTTAGTTTaGTCCAAGTTCCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LTPGRVVQSCGPDALQIMLKALV*SKFQRE
Trigger: TTCCCTCTGGAACTTGGACCAAACTAAAGCTTTGAG...CATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR TCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAGAAACCGCTTGCAGCTaGCATCAGGGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRETACS*HQGAPQ
Trigger: CTGTGGAGCTCCCTGATGTCAGCTGCAAGCGGTTTC...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCATCAGAATTTGCTCGATaGAGGTGTCCCACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPSEFAR*RCPTPC
Trigger: GCACGGAGTGGGACACCTTCATCGAGCAAATTCTGA...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCTAAGCGAGGCAATAACAAGTCAGAATTTGCTCGATaGAGGTGTCCCACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: PVGSLFPLCPGSKRGNNKSEFAR*RCPTPC
Trigger: GCACGGAGTGGGACACCTTCATCGAGCAAATTCTGA...CTTGTTATTGCCTCGCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACAGTTCCAGAGGGAATTaGAAATCTTATGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDSSRGN*KSYADH
Trigger: GTGATCTGCATAAGATTTTCAATTCCCTCTGGAACT...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACTGTAGGAAGGCAAAATaGCCTGAGGCCATTTCCACT +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNCRKAK*PEAIST
Trigger: AGTGGAAATGGCCTCAGGTCATTTTGCCTTCCTACA...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTTGTAGGAAGGCAAAATaGCCTGAGGCCATTTCCACT +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSCRKAK*PEAIST
Trigger: AGTGGAAATGGCCTCAGGTCATTTTGCCTTCCTACA...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGAAGCTTGTAGGAAGGCAAAATaGCCTGAGGCCATTTCCACT +
Preference number: 4 (lower is better)
Translates to: FHRPHQHPHPGLVPPWEACRKAK*PEAIST
Trigger: AGTGGAAATGGCCTCAGGTCATTTTGCCTTCCTACA...AGCTTCCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCCGTGGAGGCATTTCTaGCAGTCATTTCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSPWRHF*QSFHKA
Trigger: CGCTTTATGAAATGACTGTCAGAAATGCCTCCACGG...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCCGTGGAGGCATTTCTaGCAGTCATTTCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIPWRHF*QSFHKA
Trigger: CGCTTTATGAAATGACTGTCAGAAATGCCTCCACGG...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTCTTTGCCGGAGAGGCTaGAGGCGCCATCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPLCRRG*RRHPEG
Trigger: ACCCTCAGGATGGCGCCTTCAGCCTCTCCGGCAAAG...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTCTGGGTCTGCCGACCTaGAGAACTAACCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPLGLPT*RTNPCP
Trigger: GGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAG...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGTGGTCCTGTTGTCACTaGATTCTCAGGGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKWSCCH*ILRAQP
Trigger: GGGCTGAGCCCTGAGAATTCAGTGACAACAGGACCA...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCCCAGGAACACACAGCTaGGTGTCGCTCCCTTTCACG +
Preference number: 4 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSPGTHS*VSLPFT
Trigger: CGTGAAAGGGAGCGACACTCAGCTGTGTGTTCCTGG...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGTGATACAGGTGGCTTaGTGTCTGACCAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LMLSRSWPDKHPFSFLPSVIQVA*CLTRFH
Trigger: ATGGAACCTGGTCAGACATCAAGCCACCTGTATCAC...AGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR GCA 90 bp ACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCATCATGTATATTTCCATaGCTCTTACAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TPCFSSFCFALPERLKAPSCIFP*LLQLRE
Trigger: CTCCCTGAGTTGTAAGAGGCATGGAAATATACATGA...TGGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR GCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGTGTCCCACTCCGTaGTCAGTTCTTCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPRCPTP*SVLPEN
Trigger: GTTCTCAGGAAGAACTGAGCACGGAGTGGGACACCT...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGG +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLARELQNAG*LQQQQG
Trigger: CCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGGGAGGCGCTGAGAGATaGCTTGCAGTAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVGGAER*LAVRSP
Trigger: AGGGCTCCTTACTGCAAGGCATCTCTCAGCGCCTCC...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCACTTCCTCTATGGCTaGGCTGTCTCCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLAHFLYG*AVSQQR
Trigger: CCGCTGCTGGGAGACAGCGCAGCCATAGAGGAAGTG...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTTCAGTGAAGCCAGGCTaGTGTGGTACACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: TSSPFSEARLLWYTSSMASVKPG*CGTLPL
Trigger: TAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGA...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGTCTCCTGGATGGGGTTaGAACAGGCGTACACAGCCG +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKSPGWG*NRRTQP
Trigger: CGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGA...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGCTCCGTGCTGCAGGTaGCAGCTGCTGGAAATATGT +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLAPCCR*QLLEIC
Trigger: ACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGC...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGCAAATATTTTCATCCTaGAGTCTGTCTCATACTGTC +
Preference number: 4 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVQIFSS*SLSHTV
Trigger: GACAGTATGAGACAGACTGCAGGATGAAAATATTTG...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAGCAGCTGGGTACCTaGGACTTCTGCCCCGTACCT +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNQQLGT*DFCPVP
Trigger: AGGTACGGGGCAGAAGTCGCAGGTACCCAGCTGCTG...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GACATTATAAAGTTGTCTTCGCTGGCCTGGTACTGGGGACCACTGGTCAAAGACGACAACGTGAGACATTaGGGGGACTTCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DIIKLSSLAWYWGPLVKDDNVRH*GDFLEL
Trigger: CAGCTCCAGGAAGTCCCCGCAATGTCTCACGTTGTC...GTCTTTGACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAACTTTATAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGACTATTAATCACTCATaGGACCTTTATCCTTACAGT +
Preference number: 4 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQETINHS*DLYPYS
Trigger: ACTGTAAGGATAAAGGTCGCATGAGTGATTAATAGT...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCCAGGAAAGCCAAAAGTaGGAGATGCATGCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPQESQK*EMHARA
Trigger: AGCTCTAGCATGCATCTCCCACTTTTGGCTTTCCTG...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp GGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCAGTTTTCACTCAGCATaGAAAGTTCCACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GAAWLSQTPSTSSSRPCSSFHSA*KVPLPF
Trigger: GAAGGGAAGTGGAACTTTCCATGCTGAGTGAAAACT...GGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR CCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACGTCACAACTGCCACTTaGTTAGTTTTCACTCAGCAT +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDVTTAT*LVFTQH
Trigger: ATGCTGAGTGAAAACTAACCAAGTGGCAGTTGTGAC...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGTGGGCTGAACCATCCTaGAGTCCTGCTGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALWAEPS*SPAGDA
Trigger: AGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCA...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CATCAGCAAGCTCTGAATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTCCCTTTGGATGGTGCTaGGCTGAACCATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HQQALNAVVMCEVVGAARPFGWC*AEPSWS
Trigger: ACTCCAGGATGGTTCAGCCCAGCACCATCCAAAGGG...ACGAGCAGCACCTACAACTTCACACATTACGACCGCATTCAGAGCTTGCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCTTCGTCAGGGGATGTaGGATCTGGGGTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLALRQGM*DLGWSR
Trigger: CCTGGACCACCCCAGATCCCACATCCCCTGACGAAG...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCTAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLGCYGQDGLRAALGLHAKSSSS*RKTSSF
Trigger: GAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTT...AGCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGTCTTCGAGCTGCTCTTaGGCTCCATGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKSSSCS*APCWVS
Trigger: GCTGACCCAGCATGGAGCCCAAGAGCAGCTCGAAGA...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGCTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALLLWPG*SSSCSW
Trigger: CCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAG...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGGCCTTGTTCCCCCGTaGGAAGCTTGTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKGLVPP*EACFLS
Trigger: AGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCC...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGGGCCTTGTTCCCCCGTaGGAAGCTTGTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVGLVPP*EACFLS
Trigger: AGAGAGGAAACAAGCTTCCCACGGGGGAACAAGGCC...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCTGACAGTCATTAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGT +
Preference number: 4 (lower is better)
Translates to: WMGLQQAYTAVEAFLTVISVSFR*TSSPFS
Trigger: ACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCT...AATGACTGTCAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCAATATGTCTCCTGGATaGGGTTGCAACAGGCGTACA +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPNMSPG*GCNRRT
Trigger: TGTACGCCTGTTGCAACCCCATCCAGGAGACATATT...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCAATATGTCTCCTGGATaGGGTTGCAACAGGCGTACA +
Preference number: 4 (lower is better)
Translates to: LQIMARQASVLLPAIWTSNMSPG*GCNRRT
Trigger: TGTACGCCTGTTGCAACCCCATCCAGGAGACATATT...GCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVTSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCATCGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: NAVVMCEVVGAARGGCLIGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...GATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GACGCAGTGAGTGTAGAGATTCATCCTCACGAGCCCCATGCAGGACTCTGCTGGTTGAAAGCCTTCAGGTaGCCCCAGAGAATAAAGAAC +
Preference number: 4 (lower is better)
Translates to: DAVSVEIHPHEPHAGLCWLKAFR*PQRIKN
Trigger: GTTCTTTATTCTCTGGGGCCACCTGAAGGCTTTCAA...CCAGCAGAGTCCTGCATGGGGCTCGTGAGGATGAATCTCTACACTCACTGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp GGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCGGCAAGAGAACAGAGTaGAGCCATGTTTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: GAAWLSQTPSTSSSRPCSGKRTE*SHVSFN
Trigger: ATTAAAGGAAACATGGCTCCACTCTGTTCTCTTGCC...GGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTCACCCCTGGCAGAGTTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGAAAAATAATTCCACCTaGCAAGAGAACAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LTPGRVVQSCGPDALQIMKNNST*QENRVE
Trigger: CTCCACTCTGTTCTCTTGCCAGGTGGAATTATTTTT...CATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACAAATGACATTATAAAGTTGTCTTCGCTGGCCTGGTACTGGGGACCACTGGTCTTGTCTTCGCTGGCCTaGTACTGGGGACCACTGGTC +
Preference number: 4 (lower is better)
Translates to: TNDIIKLSSLAWYWGPLVLSSLA*YWGPLV
Trigger: GACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAA...GACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAACTTTATAATGTCATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp GACATTATAAAGTTGTCTTCGCTGGCCTGGTACTGGGGACCACTGGTCAAAGACCAGGTGGCAGATGGCTaGCACAGAGGAAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: DIIKLSSLAWYWGPLVKDQVADG*HRGSQN
Trigger: GTTTTGGCTTCCTCTGTGCCAGCCATCTGCCACCTG...GTCTTTGACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAACTTTATAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp AATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCATCAAGAATCCAACTAGCTaGTCCAGAAACCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: NAVVMCEVVGAARGGCLIKNPTS*SRNRLQ
Trigger: CTGCAAGCGGTTTCTGGATCAGCTAGTTGGATTCTT...GATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAAGCCATTTCCACTTCCTaGGCCTCTGGAATGTGGATT +
Preference number: 4 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQAISTS*ASGMWI
Trigger: AATCCACATTCCAGAGGCTCAGGAAGTGGAAATGGC...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGTGCGGTCGTAATGTGTaGAGTTGTAGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVCGRNV*SCRCCS
Trigger: CGAGCAGCACCTACAACTTCACACATTACGACCGCA...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTCCGTGGAGGCATTTCTaGCAGTCATTTCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: LMLSRSWPDKHPFSFLPSPWRHF*QSFHKA
Trigger: CGCTTTATGAAATGACTGTCAGAAATGCCTCCACGG...AGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCATCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPSRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACGATAAAAGTAACAAATaGCAGCTCTTGTTGGATCGC +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDDKSNK*QLLLDR
Trigger: GCGATCCAACAAGAGCTGGCATTTGTTACTTTTATC...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCGTCCTTTATAGAGGATaGAGCCAGCGAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTAVLYRG*SQRECE
Trigger: CTCACATTCTCGCTGGCTGCATCCTCTATAAAGGAC...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTATGCAGTAAGGAGCCCTaGCATCTGGAACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLCSKEP*HLEQAH
Trigger: ATGTGCCTGTTCCAGATGGCAGGGCTCCTTACTGCA...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACGCAATAACAAGGGCCTaGGGGTCCTTCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNAITRA*GSFWGE
Trigger: CTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCAGCAGCTTCTGCTTTaGTTTGCCGGAGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVQQLLL*FAGEAE
Trigger: TTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTG...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCAGCAGCTTCTGCTTTaGTTTGCCGGAGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKQQLLL*FAGEAE
Trigger: TTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTG...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTGGGCAAGAGGCATCATaGCCACCCATCAGCATGCTC +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLAGQEAS*PPISML
Trigger: GAGCATGCTGATGGGTGGGCATGATGCCTCTTGCCC...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR CCA 90 bp AATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCATCCAGGAAAGCCAAAAGTaGGAGATGCATGCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: NAVVMCEVVGAARGGCLIQESQK*EMHARA
Trigger: AGCTCTAGCATGCATCTCCCACTTTTGGCTTTCCTG...GATGAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR CCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAATGCCAGCTCTTGTTaGATCGCCTTCTTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSNASSC*IAFFLY
Trigger: GTAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATT...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGATGGGCTGAACCATCCTaGAGTCCTGCTGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRWAEPS*SPAGDA
Trigger: AGCATCTCCAGCAGGACTCCAGGATGGTTCAGCCCA...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDKSSSS*RKTSSF
Trigger: GAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTT...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGATCTTGGGCTCCATGCTaGGTCAGCATCTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRSWAPC*VSISGA
Trigger: TGCTCCTGAGATGCTGACCCAGCATGGAGCCCAAGA...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGGTACACTTCCTCTATaGCTGCGCTGTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREGTLPL*LRCLPA
Trigger: TGCTGGGAGACAGCGCAGCCATAGAGGAAGTGTACC...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGTTCCCAGTCACCTCCTaGGTGCAGTTCAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVFPVTS*VQFRAS
Trigger: ACTTGCTCTGAACTGCACCCAGGAGGTGACTGGGAA...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 4 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGACAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 4 (lower is better)
Translates to: ARQASVLLPAIWTSFVRGQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTACAAACATCAGTGCCTTaGCTCGGAGTAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLQTSVP*LGVARH
Trigger: ATGCCTGGCTACTCCGAGCCAAGGCACTGATGTTTG...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp GCTTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCCCATTAGGGTTCTGGTaGGTAACTCGATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: ASFAGFLLPSHLLGAVQSPLGFW*VTRFLK
Trigger: CTTCAAGAATCGAGTTACCCACCAGAACCCTAATGG...GCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGAATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCCCATTAGGGTTCTGGTaGGTAACTCGATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LNAVVMCEVVGAARGGCLPLGFW*VTRFLK
Trigger: CTTCAAGAATCGAGTTACCCACCAGAACCCTAATGG...GAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCGCTCCATTAGGGTTCTaGTGGGTAACTCGATTCTTG +
Preference number: 4 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTAAPLGF*WVTRFL
Trigger: CAAGAATCGAGTTACCCACCAGAACCCTAATGGAGC...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429411.5
CDS-3UTR TCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGCCATTTCCACTTCCTaGGCCTCTGGAATGTGGATT +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKAISTS*ASGMWI
Trigger: AATCCACATTCCAGAGGCTCAGGAAGTGGAAATGGC...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGGAAGGCAAAATGACCTaGGGCCATTTCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVEGKMT*GHFHFL
Trigger: CAGGAAGTGGAAATGGCCTCAGGTCATTTTGCCTTC...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTATCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLSRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGCTTATTACTGTGTTTaGAAGCCTTCAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKAYYCV*KPSGGP
Trigger: GGGGCCACCTGAAGGCTTTCAAACACAGTAATAAGC...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402105.7
ENST00000464362.5
CDS-3UTR TCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCTGGTCAAAGACAACGTaGGACATTGCGGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSWSKTT*DIAGTS
Trigger: GGAAGTCCCCGCAATGTCTCACGTTGTCTTTGACCA...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp GGAGATGCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGAAGTTAAGGAGGGTCTaGAAGCAGGGATTTGACAGC +
Preference number: 4 (lower is better)
Translates to: GDARDLVICSTGNSWRLMKLRRV*KQGFDS
Trigger: GCTGTCAAATCCCTGCTTTCAGACCCTCCTTAACTT...CATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR TCA 90 bp GCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGATCGGGAGAGAAAGGTTaGAAAGCACTTTTACAAGAA +
Preference number: 4 (lower is better)
Translates to: ARQASVLLPAIWTSFVRGSGEKG*KALLQE
Trigger: TTCTTGTAAAAGTGCTTTTCAACCTTTCTCTCCCGA...TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR GCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGCCAAAAGTGGGAGATaGATGCTAGAGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLAKSGR*MLELVF
Trigger: GAACACCAGCTCTAGCATGCATCTCCCACTTTTGGC...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR GCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAGGTGTCCCACTCCGTaGTCAGTTCTTCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSRCPTP*SVLPEN
Trigger: GTTCTCAGGAAGAACTGAGCACGGAGTGGGACACCT...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGCAATAACAAGGGCCTaGGGGTCCTTCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPAITRA*GSFWGE
Trigger: CTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGCACCTGCGGCAGGTTTaGCATCAGCAAGCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKHLRQV*HQQALN
Trigger: ATTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTG...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTTGGGCAAATTCGCTATaGATCAGGCTGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLAWANSL*IRLTAW
Trigger: CCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCA...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACACCACTATTAATCACTCATGCGACCTTTATCCTTACAGTTCACAGGTGGCAGTCTCCTGGATGGGGTTaGAACAGGCGTACACAGCCG +
Preference number: 4 (lower is better)
Translates to: TPLLITHATFILTVHRWQSPGWG*NRRTQP
Trigger: CGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGA...CTGCCACCTGTGAACTGTAAGGATAAAGGTCGCATGAGTGATTAATAGTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACGCTCCGTGCTGCAGGTaGCAGCTGCTGGAAATATGT +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNAPCCR*QLLEIC
Trigger: ACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGC...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGCAGCAGCTTCTGCTTTaGTTTGCCGGAGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKQQLLL*FAGEAE
Trigger: TTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTG...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGTGCTTCAGCAGCTTCTaGTTTGCTTTGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKCFSSF*FALPER
Trigger: CCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCA...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGATGCTTCAGCAGCTTCTaGTTTGCTTTGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRCFSSF*FALPER
Trigger: CCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCA...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CATCAGCAAGCTCTGAATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTCAGTTCTTTATCAAGTaGTCTGGGTCTGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: HQQALNAVVMCEVVGAARQFFIK*SGSADL
Trigger: CAGGTCGGCAGACCCAGAGCACTTGATAAAGAACTG...ACGAGCAGCACCTACAACTTCACACATTACGACCGCATTCAGAGCTTGCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTTCACTCGGGGAAATATaGCTCAGTTCCACATTCCTT +
Preference number: 4 (lower is better)
Translates to: LMLSRSWPDKHPFSFLPSSLGEI*LSSTFL
Trigger: AAGGAATGTGGAACTGAGGCATATTTCCCCGAGTGA...AGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCAAAGCAACTCCTGTTaGTCTAGCAGGGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVQSNSC*SSRVWE
Trigger: TTCCCAGACCCTGCTAGACCAACAGGAGTTGCTTTG...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTACAAAGCAACTCCTGTTaGTCTAGCAGGGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLQSNSC*SSRVWE
Trigger: TTCCCAGACCCTGCTAGACCAACAGGAGTTGCTTTG...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGCCATGGATTCCACATaGCCAGTGGCGTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKAMDST*PVAFSF
Trigger: GAAAGAAAACGCCACTGGCCATGTGGAATCCATGGC...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGGCCATGGATTCCACATaGCCAGTGGCGTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVAMDST*PVAFSF
Trigger: GAAAGAAAACGCCACTGGCCATGTGGAATCCATGGC...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCTGACAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: CLLDGVATGVHSRGGISDKSSSS*RKTSSF
Trigger: GAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTT...GTCAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCTGCTATGGCCAGGATaGTCTTCGAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLALLWPG*SSSCSW
Trigger: CCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAG...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTATGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCG +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLWKYVS*MGLQQA
Trigger: CGCCTGTTGCAACCCCATCCAGGAGACATATTTCCA...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGTTCCCAGTCACCTCCTaGGTGCAGTTCAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREFPVTS*VQFRAS
Trigger: ACTTGCTCTGAACTGCACCCAGGAGGTGACTGGGAA...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTACCTCAGGCTCAGTATaGCAGAGAGGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPTSGSV*QRGSQA
Trigger: GGCTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGT...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CTGAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATCAATTCAAGCTGGGATaGAACAGCAGGAGATATGAA +
Preference number: 4 (lower is better)
Translates to: LNCIPDQGLRGFHRPHQHQFKLG*NSRRYE
Trigger: TTCATATCTCCTGCTGTTCCATCCCAGCTTGAATTG...ATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGTACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGATACCACCACCTGGTGTaGGGGTTGAACACACACACT +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRYHHLV*GLNTHT
Trigger: AGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTA...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGCAGAATTCAACCAAGTaGTCTCCGTGTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLAREQNSTK*SPCAAA
Trigger: AGCGGCAGCACACGGAGACCACTTGGTTGAATTCTG...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: AREEPAARPTCSQRQRRLNTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGNTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGGCAAGAGAACAGAGTaGAGCCATGTTTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNGKRTE*SHVSFN
Trigger: ATTAAAGGAAACATGGCTCCACTCTGTTCTCTTGCC...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402105.7
ENST00000429411.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGACAGGCTTGGTGTATTaGATCAGCTGCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVTGLVY*ISCSWC
Trigger: GCACCAGCTGCAGCTGATCCAATACACCAAGCCTGT...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGCTTACAGTTCACAGGTaGCAGATGGCTGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLARELTVHR*QMAGTE
Trigger: CTCTGTGCCAGCCATCTGCCACCTGTGAACTGTAAG...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
3UTR CAA 72 bp TCCACCGGGAACTCGTGGAGACTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATAATCTGGACATTCGGG +
Preference number: 4 (lower is better)
Translates to: STGNSWRLMASS*VTKTGIIWTFG
Trigger: CCCGAATGTCCAGATTATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GAAAACAGCGGGTTAAGTGTTTCTTCTCTGCAGCCTCTGGGCCACAGTTACCAATGTAGGAAGGCAAAATaGCCTGAGGCCATTTCCACT +
Preference number: 4 (lower is better)
Translates to: ENSGLSVSSLQPLGHSYQCRKAK*PEAIST
Trigger: AGTGGAAATGGCCTCAGGTCATTTTGCCTTCCTACA...TTGGTAACTGTGGCCCAGAGGCTGCAGAGAAGAAACACTTAACCCGCTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACTGCGGTCGTAATGTGTaGAGTTGTAGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNCGRNV*SCRCCS
Trigger: CGAGCAGCACCTACAACTTCACACATTACGACCGCA...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCCGTGGAGGCATTTCTaGCAGTCATTTCATAAAGCG +
Preference number: 4 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVPWRHF*QSFHKA
Trigger: CGCTTTATGAAATGACTGTCAGAAATGCCTCCACGG...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGTCACGCAGCCACCACTaGAAAGCACAGTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLARESRSHH*KAQCFY
Trigger: GTAAAAGCACTGTGCTTTTCAGTGGTGGCTGCGTGA...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGATCCGTTCTCCTTCCTaGCATCTGGACAAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKIRSPS*HLDKLR
Trigger: ACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGAT...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGTCAGTGAAGCCAGGCTaGTGTGGTACACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: AFTPRHLVNSYLGTLARESVKPG*CGTLPL
Trigger: TAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGA...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCACCTGCGGCAGGTTTaGCATCAGCAAGCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNHLRQV*HQQALN
Trigger: ATTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTG...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGCTCCGTGCTGCAGGTaGCAGCTGCTGGAAATATGT +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPAPCCR*QLLEIC
Trigger: ACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGC...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTTGCTTCAGCAGCTTCTaGTTTGCTTTGCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLACFSSF*FALPER
Trigger: CCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCA...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGAGCAAGTTCACCCCGTaGTTCAGCAGCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAESKFTP*FSSFCF
Trigger: AAAGCAGAAGCTGCTGAAGCACGGGGTGAACTTGCT...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAAGCAAGTTCACCCCGTaGTTCAGCAGCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRSKFTP*FSSFCF
Trigger: AAAGCAGAAGCTGCTGAAGCACGGGGTGAACTTGCT...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGACAAAGCAACTCCTGTTaGTCTAGCAGGGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRQSNSC*SSRVWE
Trigger: TTCCCAGACCCTGCTAGACCAACAGGAGTTGCTTTG...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACTCCACCGGGAACTCGTaGAGACTAATGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNSTGNS*RLMASS
Trigger: AGAGGAAGCCATTAGTCTCCACGAGTTCCCGGTGGA...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCGCCATGGATTCCACATaGCCAGTGGCGTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSAMDST*PVAFSF
Trigger: GAAAGAAAACGCCACTGGCCATGTGGAATCCATGGC...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCAAGTCGAGTTCTTCTTaGAGAAAGACTAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIKSSSS*RKTSSF
Trigger: GAAGGAACTAGTCTTTCTCCAAGAAGAACTCGACTT...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTCATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPHAGLC*CQPGAD
Trigger: ATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATG...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACGGATAGGCTTTGTACGGTTCCATTTTGGGTCAGTGGAAGAATTTTCACAACAAGGCTGCCTCATCCCTaGGCAGCGTCTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TDRLCTVPFWVSGRIFTTRLPHP*AASLSG
Trigger: ACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCT...TGTTGTGAAAATTCTTCCACTGACCCAAAATGGAACCGTACAAAGCCTATCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACTTCCCAGTCACCTCCTaGGTGCAGTTCAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNFPVTS*VQFRAS
Trigger: ACTTGCTCTGAACTGCACCCAGGAGGTGACTGGGAA...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAGAATTCAACCAAGTaGTCTCCGTGTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNQNSTK*SPCAAA
Trigger: AGCGGCAGCACACGGAGACCACTTGGTTGAATTCTG...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDNTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGGGCCATAAGAGGTTGTaGTGCCCATTCCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKGHKRL*CPFQQE
Trigger: TTCTTGCTGGAATGGGCACCACAACCTCTTATGGCC...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp CTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTAACATGCAGATGGCTTaGTTTCCTTCGCATAACTTG +
Preference number: 4 (lower is better)
Translates to: LMLSRSWPDKHPFSFLPSNMQMA*FPSHNL
Trigger: CAAGTTATGCGAAGGAAACCAAGCCATCTGCATGTT...AGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
3UTR CAA 72 bp TTGCCTTACCCTCTCCCAATCACAATCTCCTGGCACTaGACCGAGCAGTCTCACAATATGAAGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPYPLPITISWH*TEQSHNMKLRR
Trigger: CCTCCTTAACTTCATATTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTGTGATTGGGAGAGGGTAAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR TCA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCAGTTCAAACCCATCCTaGAGACTCTTATTAAACGTT +
Preference number: 4 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPSSNPS*RLLLNV
Trigger: AACGTTTAATAAGAGTCTTCAGGATGGGTTTGAACT...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR TCA 90 bp TGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCTGACAGTCATTAGTTCCAGAGGGAATTaGAAATCTTATGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: WMGLQQAYTAVEAFLTVISSRGN*KSYADH
Trigger: GTGATCTGCATAAGATTTTCAATTCCCTCTGGAACT...AATGACTGTCAGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAACAGCAGGAGATATaGAATACCTCAGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLEQQEI*NTSGSV
Trigger: TACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTC...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCAAATATTTTCATCCTaGAGTCTGTCTCATACTGTC +
Preference number: 4 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIQIFSS*SLSHTV
Trigger: GACAGTATGAGACAGACTGCAGGATGAAAATATTTG...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGCAGGAAAGCCAAAAGTaGGAGATGCATGCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKQESQK*EMHARA
Trigger: AGCTCTAGCATGCATCTCCCACTTTTGGCTTTCCTG...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAGTCACAACTGCCACTTaGTTAGTTTTCACTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPVTTAT*LVFTQH
Trigger: ATGCTGAGTGAAAACTAACCAAGTGGCAGTTGTGAC...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGAATGCCAGCTCTTGTTaGATCGCCTTCTTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALNASSC*IAFFLY
Trigger: GTAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATT...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTATGCTCTCCAGATCATaGCCAGACAAGCATCCGTTC +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLAMLSRS*PDKHPF
Trigger: GAACGGATGCTTGTCTGGCCATGATCTGGAGAGCAT...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACGGATAGGCTTTGTACGGTTCCATTTTGGGTCAGTGGAAGAATTTTCACAACACATGCAGGACTCTGCTaGTGTCAGCCTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TDRLCTVPFWVSGRIFTTHAGLC*CQPGAD
Trigger: ATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATG...TGTTGTGAAAATTCTTCCACTGACCCAAAATGGAACCGTACAAAGCCTATCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGACTTTATCAAGTGCTCTaGGTCTGCCGACCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRLYQVL*VCRPEE
Trigger: TTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAG...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACGGCACCAATTCAAGCTaGGATGGAACAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNGTNSS*DGTAGD
Trigger: ATCTCCTGCTGTTCCATCCCAGCTTGAATTGGTGCC...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAAAGTTCCAGAGGGAATTaGAAATCTTATGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQSSRGN*KSYADH
Trigger: GTGATCTGCATAAGATTTTCAATTCCCTCTGGAACT...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR TCA 90 bp ACGGATAGGCTTTGTACGGTTCCATTTTGGGTCAGTGGAAGAATTTTCACAACACTTACCCAGCCACACTaGACCCAGGGAAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TDRLCTVPFWVSGRIFTTLTQPH*TQGRKR
Trigger: TCTTTTCCTTCCCTGGGTTCAGTGTGGCTGGGTAAG...TGTTGTGAAAATTCTTCCACTGACCCAAAATGGAACCGTACAAAGCCTATCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTGTCCTTTATAGAGGATaGAGCCAGCGAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLAVLYRG*SQRECE
Trigger: CTCACATTCTCGCTGGCTGCATCCTCTATAAAGGAC...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGCATATTATTAAGGCTTaGCCCCATTGTGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALHIIKA*PHCGSK
Trigger: TTTGGACCCACAATGGGGGCAAGCCTTAATAATATG...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp ACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACACTTCCTCTATGGCTCAAATATTTTCATCCTaGAGTCTGTCTCATACTGTC +
Preference number: 4 (lower is better)
Translates to: TSSPFSEARLLWYTSSMAQIFSS*SLSHTV
Trigger: GACAGTATGAGACAGACTGCAGGATGAAAATATTTG...AGCCATAGAGGAAGTGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTTTCAAACTAAAAATATaGCTCTATCCAGCCGTTAGA +
Preference number: 4 (lower is better)
Translates to: SYLGTLAREEPAARPTCSFKLKI*LYPAVR
Trigger: TCTAACGGCTGGATAGAGGCATATTTTTAGTTTGAA...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402105.7
CDS-3UTR GCA 90 bp ACAAATGACATTATAAAGTTGTCTTCGCTGGCCTGGTACTGGGGACCACTGGTCCATAAGAGGTTGTGGTaGCCATTCCAGCAAGAACAT +
Preference number: 4 (lower is better)
Translates to: TNDIIKLSSLAWYWGPLVHKRLW*PFQQEH
Trigger: ATGTTCTTGCTGGAATGGGCACCACAACCTCTTATG...GACCAGTGGTCCCCAGTACCAGGCCAGCGAAGACAACTTTATAATGTCATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACCTCCATCAACTTTTATaGCAAACTTCAGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNLHQLL*QTSVFS
Trigger: TGAGAAAACTGAAGTTTGCCATAAAAGTTGATGGAG...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTACTCAAAGCTTTAGTTTaGTCCAAGTTCCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLLKALV*SKFQRE
Trigger: TTCCCTCTGGAACTTGGACCAAACTAAAGCTTTGAG...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR TCA 90 bp GGAGATGCTAGAGACCTTGTCATCTGTTCCACCGGGAACTCGTGGAGACTAATGAGTTCAAACCCATCCTaGAGACTCTTATTAAACGTT +
Preference number: 4 (lower is better)
Translates to: GDARDLVICSTGNSWRLMSSNPS*RLLLNV
Trigger: AACGTTTAATAAGAGTCTTCAGGATGGGTTTGAACT...CATTAGTCTCCACGAGTTCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR TCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGAGTTCCAGAGGGAATTaGAAATCTTATGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKSSRGN*KSYADH
Trigger: GTGATCTGCATAAGATTTTCAATTCCCTCTGGAACT...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTATCATGTATATTTCCATaGCTCTTACAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLSCIFP*LLQLRE
Trigger: CTCCCTGAGTTGTAAGAGGCATGGAAATATACATGA...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR GCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGGTGGCCATCTACTGTaGAGTCATCCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPGGHLL*SHPHSL
Trigger: AAGAGAATGAGGATGACTGCACAGTAGATGGCCACC...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTAATATGTCTCCTGGATaGGGTTGCAACAGGCGTACA +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPNMSPG*GCNRRT
Trigger: TGTACGCCTGTTGCAACCCCATCCAGGAGACATATT...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp ACACCACTATTAATCACTCATGCGACCTTTATCCTTACAGTTCACAGGTGGCAGCAACTTGGAAGCTTGTaGCACCAATTCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TPLLITHATFILTVHRWQQLGSL*HQFKLG
Trigger: TCCCAGCTTGAATTGGTGCCACAAGCTTCCAAGTTG...CTGCCACCTGTGAACTGTAAGGATAAAGGTCGCATGAGTGATTAATAGTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CCA 90 bp GAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTAATACAACTCTCAAATaGAATCTCAAGTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: EICLLDGVATGVHSRGGINTTLK*NLKYFQ
Trigger: CTGGAAGTACTTGAGATTCCATTTGAGAGTTGTATT...AATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGGGCAAGAGAACAGAGTaGAGCCATGTTTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKGKRTE*SHVSFN
Trigger: ATTAAAGGAAACATGGCTCCACTCTGTTCTCTTGCC...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402105.7
ENST00000429411.5
ENST00000464362.5
CDS-3UTR CCA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCTTACCATTAGGGTTCTaGTGGGTAACTCGATTCTTG +
Preference number: 4 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSLPLGF*WVTRFL
Trigger: CAAGAATCGAGTTACCCACCAGAACCCTAATGGTAA...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CCA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACTGCAAAAGGTCTTTCTaGCAGTCGCTGTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNCKRSF*QSLFAL
Trigger: TAAGGCAAACAGCGACTGCCAGAAAGACCTTTTGCA...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR GCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAGTTTTCAGTCACAACTaGCACTTGGTTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRVFSHN*HLVSFH
Trigger: GTGAAAACTAACCAAGTGGCAGTTGTGACTGAAAAC...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGTGTACGGTTCCATTTTaGGTCAGTGGAAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAECTVPF*VSGRIF
Trigger: GAAAATTCTTCCACTGACCCAAAATGGAACCGTACA...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR TCA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAAGTTCAAACCCATCCTaGAGACTCTTATTAAACGTT +
Preference number: 4 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRSSNPS*RLLLNV
Trigger: AACGTTTAATAAGAGTCTTCAGGATGGGTTTGAACT...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CCA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGCTCCATCAACTTTTATaGCAAACTTCAGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKLHQLL*QTSVFS
Trigger: TGAGAAAACTGAAGTTTGCCATAAAAGTTGATGGAG...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTACTCCATCAACTTTTATaGCAAACTTCAGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLLHQLL*QTSVFS
Trigger: TGAGAAAACTGAAGTTTGCCATAAAAGTTGATGGAG...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CCA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGTCCATTTTGGGTCAGTaGAAGAATTTTCACAACACA +
Preference number: 4 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKSILGQ*KNFHNT
Trigger: TGTGTTGTGAAAATTCTTCCACTGACCCAAAATGGA...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR GCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGATAAAAGTAACAAATaGCAGCTCTTGTTGGATCGC +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPDKSNK*QLLLDR
Trigger: GCGATCCAACAAGAGCTGGCATTTGTTACTTTTATC...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR GCA 90 bp CAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTCAAATATTTTCATCCTaGAGTCTGTCTCATACTGTC +
Preference number: 4 (lower is better)
Translates to: QHYRLNTVLYQVLWVCRPQIFSS*SLSHTV
Trigger: GACAGTATGAGACAGACTGCAGGATGAAAATATTTG...AGGTCGGCAGACCCAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS GCA 90 bp GAAATGTGGGCAGCAGCTGGGTACCTGCGACTTCTGCCCCGTACCTaGGCGCGCGGCAGAGAGGCCTTAGGTCACGCGCCGCCCCGCCTA +
Preference number: 5 (lower is better)
Translates to: EMWAAAGYLRLLPRT*ARGREALGHAPPRL
Trigger: TAGGCGGGGCGGCGCGTGACCTAAGGCCTCTCTGCCGCGCGCGCAGGTACGGGGCAGAAGTCGCAGGTACCCAGCTGCTGCCCACATTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479064.5
CDS-3UTR CAA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCGCCATCCTGAGGGTTaGGGAAGCCGGAGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPRHPEG*GSRSSV
Trigger: CACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCG...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGATTGGCTGTCCGTCGCTaGGCCCGTACTCTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: RTSQQERTGETYLRRGSGLAVRR*ARTLGA
Trigger: CGCCCCCAGAGTACGGGCCAAGCGACGGACAGCCAA...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS CCA 90 bp AGTGCTCGGGGTTCGGGACTCTGGACCAGAAATGTGGGCAGCAGCTaGGTACCTGCGACTTCTGCCCCGTACCTGCGCGCGCGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: SARGSGLWTRNVGSS*VPATSAPYLRARQR
Trigger: TCTCTGCCGCGCGCGCAGGTACGGGGCAGAAGTCGCAGGTACCCAGCTGCTGCCCACATTTCTGGTCCAGAGTCCCGAACCCCGAGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398145.7
ENST00000479064.5
CDS-3UTR CAA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCTCAAACATCAGTGCCTaGGCTCTGCGCGCGCGGCAG +
Preference number: 5 (lower is better)
Translates to: TKWSPCAAASLQERSGPPSNISA*ALRARQ
Trigger: CTGCCGCGCGCGCAGAGCCAAGGCACTGATGTTTGA...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336873.9
ENST00000439453.5
CDS-3UTR CAA 90 bp GTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACTCAAACATCAGTGCCTaGGCTCTGCGCGCGCGGCAG +
Preference number: 5 (lower is better)
Translates to: VGVESACSQIRHLAVQSHSNISA*ALRARQ
Trigger: CTGCCGCGCGCGCAGAGCCAAGGCACTGATGTTTGA...GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336873.9
ENST00000439453.5
CDS-3UTR CAA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCATCCCCCGTGGGAAGCTaGTTTCCTCTCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCASPVGS*FPLCPG
Trigger: TCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGA...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp AAAAGAGGGATGCGCCCACGTTACGCGCGCGCGCGCGCGCGCACACACACACACATCCTCATCCAGGCCTaGTTCCCCCGTGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: KRGMRPRYARARARTHTHILIQA*FPRGKL
Trigger: AAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGAT...GTGTGTGTGTGTGCGCGCGCGCGCGCGCGCGTAACGTGGGCGCATCCCTCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CAA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGCGCCATCCTGAGGGTTaGGGAAGCCGGAGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVRHPEG*GSRSSV
Trigger: CACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCG...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS GCA 90 bp CCAGATTTTACATCTGCCTCCCACTCGCTAGTCTGGATAACGCTCTaGGCGCGCGGCAGAGAGGCCTTAGGTCACGCGCCGCCCCGCCTA +
Preference number: 5 (lower is better)
Translates to: PDFTSASHSLVWITL*ARGREALGHAPPRL
Trigger: TAGGCGGGGCGGCGCGTGACCTAAGGCCTCTCTGCCGCGCGCGCAGAGCGTTATCCAGACTAGCGAGTGGGAGGCAGATGTAAAATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473782.1
CDS CCA 90 bp TGGCTCGGAGTAGCCAGGCATCCCAGTGCTCGGGGTTCGGGACTCTaGACCAGAAATGTGGGCAGCAGCTGGGTACCTGCGACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: WLGVARHPSARGSGL*TRNVGSSWVPATSA
Trigger: GGCAGAAGTCGCAGGTACCCAGCTGCTGCCCACATTTCTGGTCCAGAGTCCCGAACCCCGAGCACTGGGATGCCTGGCTACTCCGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS CCA 90 bp ACGCTCGGAGTAGCCAGGCATCCCAGTGCTCGGGGTTCGGGACTCTaGACCAGAAATGTGGGCAGCAGCTGGGTACCTGCGACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: TLGVARHPSARGSGL*TRNVGSSWVPATSA
Trigger: GGCAGAAGTCGCAGGTACCCAGCTGCTGCCCACATTTCTGGTCCAGAGTCCCGAACCCCGAGCACTGGGATGCCTGGCTACTCCGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479064.5
CDS-3UTR CAA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGAGGGAGGGCGGGAGTaGGGTGCTGACAATCAGTCC +
Preference number: 5 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSEGGRE*GADNQS
Trigger: GGACTGATTGTCAGCACCCAACTCCCGCCCTCCCTC...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGATCCTCATCCAGGCCTaGTTCCCCCGTGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPILIQA*FPRGKL
Trigger: AAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGAT...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGGGCTGCGCCATCCTGAGGGTTaGGGAAGCCGGAGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GQHPDSLLSLNCIPDQGLRHPEG*GSRSSV
Trigger: CACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCG...CAGCCCCTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAGCTTCTGCTTTGCTTaGCCGGAGAGGCTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SGTSLCSHTAYHHLVWGLSFCFA*PERLKA
Trigger: CGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCT...CAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCAGCTTCTGCTTTGCTTaGCCGGAGAGGCTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: PSKSALEKPTCGVGVESASFCFA*PERLKA
Trigger: CGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCGCAAGAACATGCTGCTaGGCTGTCCGTCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TKWSPCAAASLQERSGPPARTCC*AVRRLA
Trigger: GGCCAAGCGACGGACAGCCAAGCAGCATGTTCTTGC...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS GCA 90 bp GCTGTCCAGCCAGGTGGGTGGACTTTACAATACCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGACCTTGGCGGTGAGGGAGGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: AVQPGGWTLQYLLLR*CSVKQDLGGEGGRE
Trigger: CTCCCGCCCTCCCTCACCGCCAAGGTCCTGCTTCACCGAACAGCACCTCAGGAGCAGGTATTGTAAAGTCCACCCACCTGGCTGGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS-3UTR CAA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTTCCCCCGTGGGAAGCTaGTTTCCTCTCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPSPVGS*FPLCPG
Trigger: TCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGA...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGCCACCTGCGGCAGGTTaGCCATCAGCAAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWPPAAG*PSASSE
Trigger: TTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTGG...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCCACCTGCGGCAGGTTaGCCATCAGCAAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQPPAAG*PSASSE
Trigger: TTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTGG...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCCACCTGCGGCAGGTTaGCCATCAGCAAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAPPAAG*PSASSE
Trigger: TTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTGG...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAAGCTTCTGCTTTGCTTaGCCGGAGAGGCTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: RTSQQERTGETYLRRGSGSFCFA*PERLKA
Trigger: CGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCT...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS GCA 90 bp CCACTCGCTAGTCTGGATAACGCTCGGAGTAGCCAGGCATCCCAGTaGTCGGGGTTCGGGACTCTGGACCAGAAATGTGGGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PLASLDNARSSQASQ*SGFGTLDQKCGQQL
Trigger: CAGCTGCTGCCCACATTTCTGGTCCAGAGTCCCGAACCCCGAGCACTGGGATGCCTGGCTACTCCGAGCGTTATCCAGACTAGCGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479064.5
CDS CCA 90 bp CTGCTCGTGGAGGCTGCCTCATCCCTGGGCAGCGTCTCTTTCAGGTaGACTTCCAGCCCATTCAGTGAAGCCAGGCTGCTGTGGTACTGC +
Preference number: 5 (lower is better)
Translates to: LLVEAASSLGSVSFR*TSSPFSEARLLWYC
Trigger: GCAGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCAGGGATGAGGCAGCCTCCACGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS-3UTR CAA 90 bp CAGAGGGGCCAGCACCCTGACAGTTTGCTGAGCCTGAACTGCATTCCAGACCAGGAGGGAGGGCGGGAGTaGGGTGCTGACAATCAGTCC +
Preference number: 5 (lower is better)
Translates to: QRGQHPDSLLSLNCIPDQEGGRE*GADNQS
Trigger: GGACTGATTGTCAGCACCCAACTCCCGCCCTCCCTC...CTGGTCTGGAATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTGGCCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp AGCGCGGGCAGCTGGGCAAATTCGCTATGCATCAGGCTGACGGCCTGGAGGAAGATCCTCATCCAGGCCTaGTTCCCCCGTGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: SAGSWANSLCIRLTAWRKILIQA*FPRGKL
Trigger: AAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGAT...CTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTGCCCAGCTGCCCGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCATCCTCATCCAGGCCTaGTTCCCCCGTGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: GAWLLWPGWSSSCSWAPCILIQA*FPRGKL
Trigger: AAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGAT...GCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCC +
Preference number: 5 (lower is better)
Translates to: AREEPAARPTCSQRQRRLVSWMG*QQAYTA
Trigger: GGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGAC...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCGCCATCCTGAGGGTTaGGGAAGCCGGAGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDRHPEG*GSRSSV
Trigger: CACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCG...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CACCCCGTGCTTCAGCAGCTTCTGCTTTGCTTTGCCGGAGAGGCTGAAGGCGCCAGCTTCTGCTTTGCTTaGCCGGAGAGGCTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: HPVLQQLLLCFAGEAEGASFCFA*PERLKA
Trigger: CGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCT...GGCGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCTGCTGAAGCACGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCAKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQRRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGCGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: DPDLPARAHWRNLPAAWERRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGTCTGGCAGTCGCTGTTaGCCTTACCCTCTCCCAATC +
Preference number: 5 (lower is better)
Translates to: HRSGTSLCSHTAYHHLVWSGSRC*PYPLPI
Trigger: GATTGGGAGAGGGTAAGGCAAACAGCGACTGCCAGA...CCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS GCA 90 bp CCTGATCCCTCCAGCCTCAGGCTCAGTGACCAGTGCTCTGGGGGATaGTGTCCAGCCAGGTGGGTGGACTTTACAATACCTGCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: PDPSSLRLSDQCSGG*CPARWVDFTIPAPE
Trigger: CTCAGGAGCAGGTATTGTAAAGTCCACCCACCTGGCTGGACAGCATCCCCCAGAGCACTGGTCACTGAGCCTGAGGCTGGAGGGATCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 90 bp CCGGAGCTCCGTGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTaGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCAC +
Preference number: 5 (lower is better)
Translates to: PELRAAGASCWKYVS*MGLQQAYTAVEAFH
Trigger: GTGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496385.5
CDS-3UTR CAA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTGGGCTCCACTTTAGTTaGGTCCAAGTTCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAGLHFS*VQVPEG
Trigger: TCCCTCTGGAACTTGGACCAAACTAAAGTGGAGCCC...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
CDS-3UTR CAA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTGAGATGCTAGAGACCTaGTCATCTGTTCCACCGGGA +
Preference number: 5 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPAEMLET*SSVPPG
Trigger: TCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTC...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGGAGATGCTAGAGACCTaGTCATCTGTTCCACCGGGA +
Preference number: 5 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEEMLET*SSVPPG
Trigger: TCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTC...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGGAGATGCTAGAGACCTaGTCATCTGTTCCACCGGGA +
Preference number: 5 (lower is better)
Translates to: QVVSVCCRFPAGTIRTSQEMLET*SSVPPG
Trigger: TCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTC...CTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAAAGGCAGCGCAGGTTGTCCCCCGTGGGAAGCTaGTTTCCTCTCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: AREEPAARPTCSQRQRRLSPVGS*FPLCPG
Trigger: TCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGA...CAACCTGCGCTGCCTTTGACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGCAGCACCCTGACAGTTaGCTGAGCCTGAACTGCATT +
Preference number: 5 (lower is better)
Translates to: DPDLPARAHWRNLPAAWEQHPDS*LSLNCI
Trigger: AATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTG...CTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGACAGCACCCTGACAGTTaGCTGAGCCTGAACTGCATT +
Preference number: 5 (lower is better)
Translates to: RTSQQERTGETYLRRGSGQHPDS*LSLNCI
Trigger: AATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTG...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCAGCACCCTGACAGTTaGCTGAGCCTGAACTGCATT +
Preference number: 5 (lower is better)
Translates to: WSRPAHRSGTSLCSHTAYQHPDS*LSLNCI
Trigger: AATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTG...GTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCAATAACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGCCACCTGCGGCAGGTTaGCCATCAGCAAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: AITRACGSFWGEGLLWEWPPAAG*PSASSE
Trigger: TTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTGG...CCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGTTATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGAGCTTCTGCTTTGCTTaGCCGGAGAGGCTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGSFCFA*PERLKA
Trigger: CGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCT...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCCGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: HWRNLPAAWEWSRPAHRSRRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...GGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp AGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 5 (lower is better)
Translates to: RNLPAAWEWSRPAHRSGTQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...GGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGGGCTTATTACTGTGTTaGAAAGCCTTCAGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPGLLLC*KAFRWP
Trigger: GGGCCACCTGAAGGCTTTCAAACACAGTAATAAGCC...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402105.7
ENST00000464362.5
CDS-3UTR CAA 90 bp AGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTCATGGCCATAAGAGGTaGTGGTGCCCATTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: SGVGLLTDPAPRCAVTPPHGHKR*WCPFQQ
Trigger: TTGCTGGAATGGGCACCACAACCTCTTATGGCCATG...AGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CAA 90 bp GGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGGAAAAGGGGAAAGGGTaGTACAGAACAGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: GSGVGLLTDPAPRCAVTPEKGKG*YRTAGQ
Trigger: CTGTCCAGCTGTTCTGTACAACCCTTTCCCCTTTTC...CGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS TCA 90 bp ATCCCTGGGCAGCGTCTCTTTCAGGTGGACTTCCAGCCCATTCAGTaGAGCCAGGCTGCTGTGGTACTGCTCCTGAGGTGCTGTTCGGTG +
Preference number: 5 (lower is better)
Translates to: IPGQRLFQVDFQPIQ*SQAAVVLLLRCCSV
Trigger: CACCGAACAGCACCTCAGGAGCAGTACCACAGCAGCCTGGCTTCACTGAATGGGCTGGAAGTCCACCTGAAAGAGACGCTGCCCAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS GCA 90 bp CTGCAGAATGCGGGCTGCCTTCAGCAACAACAGGGGCTCCACCTGTaGAGGGCAAGAGGCATCATGCCCACCCATCAGCATGCTCACAAT +
Preference number: 5 (lower is better)
Translates to: LQNAGCLQQQQGLHL*RARGIMPTHQHAHN
Trigger: ATTGTGAGCATGCTGATGGGTGGGCATGATGCCTCTTGCCCTGCACAGGTGGAGCCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS CCA 90 bp GGCTCAGTGACCAGTGCTCTGGGGGATGCTGTCCAGCCAGGTGGGTaGACTTTACAATACCTGCTCCTGAGGTGCTGTTCGGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: GSVTSALGDAVQPGG*TLQYLLLRCCSVKQ
Trigger: CTGCTTCACCGAACAGCACCTCAGGAGCAGGTATTGTAAAGTCCACCCACCTGGCTGGACAGCATCCCCCAGAGCACTGGTCACTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 90 bp CTCAGAGTGAGTAGCTGGGGCTGCCCTGCCTCTATGACGAGGCAATaGCAGTGTCCGAGAAAGGAGTCTAGTCTGCTCTCCACACTGGGG +
Preference number: 5 (lower is better)
Translates to: LRVSSWGCPASMTRQ*QCPRKESSLLSTLG
Trigger: CCCCAGTGTGGAGAGCAGACTAGACTCCTTTCTCGGACACTGCCATTGCCTCGTCATAGAGGCAGGGCAGCCCCAGCTACTCACTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS-3UTR CAA 90 bp GCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGAGTCACAACTGCCACTaGGTTAGTTTTCACTCAGCA +
Preference number: 5 (lower is better)
Translates to: ALSPSSGSSASRDSTSPLSHNCH*VSFHSA
Trigger: TGCTGAGTGAAAACTAACCAAGTGGCAGTTGTGACT...CAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR CAA 90 bp GCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTGGGTGTTTTTCAGAATTaGCTCGATGAAGGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: ALSPSSGSSASRDSTSPLGVFQN*LDEGVP
Trigger: TGGGACACCTTCATCGAGCAAATTCTGAAAAACACC...CAAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCAGTCCCCCGTGGGAAGCTaGTTTCCTCTCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PPPGVGVEHTHSGLVDDQSPVGS*FPLCPG
Trigger: TCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGA...CTGATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ATCCTCACGAGCCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCATCCCCCGTGGGAAGCTaGTTTCCTCTCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: ILTSPMQDSAGVSLELIPSPVGS*FPLCPG
Trigger: TCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGA...TGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GACGCAGTGAGTGTAGAGATTCATCCTCACGAGCCCCATGCAGGACTCTGCTGGGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCC +
Preference number: 5 (lower is better)
Translates to: DAVSVEIHPHEPHAGLCWVSWMG*QQAYTA
Trigger: GGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGAC...CCAGCAGAGTCCTGCATGGGGCTCGTGAGGATGAATCTCTACACTCACTGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCC +
Preference number: 5 (lower is better)
Translates to: AGNMSPGWGCNRRTQPWRVSWMG*QQAYTA
Trigger: GGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGAC...CCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: VESACSQIRHLAVQSHRLKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGATGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: RTSQQERTGETYLRRGSGCQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...TCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCTGCTTGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: ARAHWRNLPAAWEWSRPACQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...AGCAGGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACTAGCCCTTGGAAGCTaGTTTCAAGAAAAAGACACC +
Preference number: 5 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCALALGS*FQEKDT
Trigger: GGTGTCTTTTTCTTGAAACAAGCTTCCAAGGGCTAG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ACAAGGGCCTGCGGGTCCTTCTGGGGAGAGGGTCTGCTCTGGGAATGGGGGCTTGGCTTATTACTGTGTTaGAAAGCCTTCAGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: TRACGSFWGEGLLWEWGLGLLLC*KAFRWP
Trigger: GGGCCACCTGAAGGCTTTCAAACACAGTAATAAGCC...AAGCCCCCATTCCCAGAGCAGACCCTCTCCCCAGAAGGACCCGCAGGCCCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CAA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGCACACTGCCTTCCCTaGGGAAACATGGCCATAAGA +
Preference number: 5 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVAHCLP*GNMAIR
Trigger: TCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGC...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CAA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCTCAGTTCCACATTCCTaGTATGGAGTCAGGGGCCTA +
Preference number: 5 (lower is better)
Translates to: TKWSPCAAASLQERSGPPSVPHS*YGVRGL
Trigger: TAGGCCCCTGACTCCATACAAGGAATGTGGAACTGA...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS GCA 90 bp GACCCAAGCCAGTGTGTGCTAGTGAGGAGACAGAGAAGACCTACATaGCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: DPSQCVLVRRQRRPT*PEDPWPLCWFSGLL
Trigger: CAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCATGTAGGTCTTCTCTGTCTCCTCACTAGCACACACTGGCTTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS CCA 90 bp CTCAGGCTCAGTGACCAGTGCTCTGGGGGATGCTGTCCAGCCAGGTaGGTGGACTTTACAATACCTGCTCCTGAGGTGCTGTTCGGTGAA +
Preference number: 5 (lower is better)
Translates to: LRLSDQCSGGCCPAR*VDFTIPAPEVLFGE
Trigger: TTCACCGAACAGCACCTCAGGAGCAGGTATTGTAAAGTCCACCCACCTGGCTGGACAGCATCCCCCAGAGCACTGGTCACTGAGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 90 bp GGCAGTGTCCGAGAAAGGAGTCTAGTCTGCTCTCCACACTGGGGGTaGCTGGATAGACTGAGAGGGAGTGAAGGACAGGAGTGGGATGTG +
Preference number: 5 (lower is better)
Translates to: GSVRERSLVCSPHWG*LDRLRGSEGQEWDV
Trigger: CACATCCCACTCCTGTCCTTCACTCCCTCTCAGTCTATCCAGCCACCCCCAGTGTGGAGAGCAGACTAGACTCCTTTCTCGGACACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS CCA 90 bp GGCAATGGCAGTGTCCGAGAAAGGAGTCTAGTCTGCTCTCCACACTaGGGGTGGCTGGATAGACTGAGAGGGAGTGAAGGACAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: GNGSVRERSLVCSPH*GWLDRLRGSEGQEW
Trigger: CCACTCCTGTCCTTCACTCCCTCTCAGTCTATCCAGCCACCCCCAGTGTGGAGAGCAGACTAGACTCCTTTCTCGGACACTGCCATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS CCA 90 bp AGCTCCGTGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATaGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: SSVLQVPAAGNMSPG*GCNRRTQPWRHFTS
Trigger: GGAAGTGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496385.5
CDS-3UTR CAA 90 bp CCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGCCAAATGCCAGCTCTTGTaGGATCGCCTTCTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: PSKSALEKPTCGVGVESAKCQLL*DRLLPL
Trigger: TAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATTT...GGCCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGAACAAATGCCAGCTCTaGTTGGATCGCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRNKCQL*LDRLLP
Trigger: AGGAAGAAGGCGATCCAACAAGAGCTGGCATTTGTT...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTGCGGCGTGGGAGTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCACTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATA +
Preference number: 5 (lower is better)
Translates to: LRRGSGVGLLTDPAPRCALMASS*VTKTGI
Trigger: TATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAG...TGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTCACCCCTGGCAGAGTTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGGAGATGCTAGAGACCTaGTCATCTGTTCCACCGGGA +
Preference number: 5 (lower is better)
Translates to: LTPGRVVQSCGPDALQIMEMLET*SSVPPG
Trigger: TCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTC...CATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAACTCTGCCAGGGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCAGCACCCTGACAGTTaGCTGAGCCTGAACTGCATT +
Preference number: 5 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGQHPDS*LSLNCI
Trigger: AATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTG...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCC +
Preference number: 5 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIVSWMG*QQAYTA
Trigger: GGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGAC...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAACGCCATCCTGAGGGTTaGGGAAGCCGGAGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQRHPEG*GSRSSV
Trigger: CACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCG...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGAGCTTCTGCTTTGCTTaGCCGGAGAGGCTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: AGNMSPGWGCNRRTQPWRSFCFA*PERLKA
Trigger: CGCCTTCAGCCTCTCCGGCAAAGCAAAGCAGAAGCT...CCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 5 (lower is better)
Translates to: RLPPPGVGVEHTHSGLVDQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...GTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS GCA 90 bp AGCGAGAATGTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGGCTCCACTTTAGTTTGGTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: SENVRRALAGLQNAG*LQQQQGLHFSLVQV
Trigger: AACTTGGACCAAACTAAAGTGGAGCCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000422379.2
ENST00000466781.5
ENST00000485842.5
ENST00000496385.5
CDS GCA 90 bp ATTTCACAGACAAGGACCCTGAGGCTCAGAGTGAGTAGCTGGGGCTaGCCTGCCTCTATGACGAGGCAATGGCAGTGTCCGAGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: ISQTRTLRLRVSSWG*PASMTRQWQCPRKE
Trigger: CTCCTTTCTCGGACACTGCCATTGCCTCGTCATAGAGGCAGGGCAGCCCCAGCTACTCACTCTGAGCCTCAGGGTCCTTGTCTGTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS CCA 90 bp AAAATCTGCGTTCCAGATTTTACATCTGCCTCCCACTCGCTAGTCTaGATAACGCTCTGCGCGCGCGGCAGAGAGGCCTTAGGTCACGCG +
Preference number: 5 (lower is better)
Translates to: KICVPDFTSASHSLV*ITLCARGREALGHA
Trigger: CGCGTGACCTAAGGCCTCTCTGCCGCGCGCGCAGAGCGTTATCCAGACTAGCGAGTGGGAGGCAGATGTAAAATCTGGAACGCAGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473782.1
CDS-3UTR CAA 90 bp GTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCAGCAAGAGTTCCACTTCCCTTCCTaGCAGGTTCTTCAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: VSVCCRFPAGTIRTSQQEFHFPS*QVLQFH
Trigger: ATGAAACTGAAGAACCTGCAAGGAAGGGAAGTGGAA...CTCTTGCTGGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CAA 90 bp CTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGGGAGTGGAGTCGGAAATGCCAGCTCTTGTaGGATCGCCTTCTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: LPARAHWRNLPAAWEWSRKCQLL*DRLLPL
Trigger: TAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATTT...CCGACTCCACTCCCACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GTGGAGTCGGCCTGCTCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTAAAATGCCAGCTCTTGTaGGATCGCCTTCTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: VESACSQIRHLAVQSHRLKCQLL*DRLLPL
Trigger: TAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATTT...TAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGGTGTTTTTCAGAATTaGCTCGATGAAGGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: IRHLAVQSHRLPPPGVGVGVFQN*LDEGVP
Trigger: TGGGACACCTTCATCGAGCAAATTCTGAAAAACACC...AACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACCTCCCGGTGTTTTTCAGAATTaGCTCGATGAAGGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: TKWSPCAAASLQERSGPPGVFQN*LDEGVP
Trigger: TGGGACACCTTCATCGAGCAAATTCTGAAAAACACC...GGGAGGTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACGGGCTCCACTTTAGTTaGGTCCAAGTTCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDGLHFS*VQVPEG
Trigger: TCCCTCTGGAACTTGGACCAAACTAAAGTGGAGCCC...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
CDS-3UTR CAA 90 bp GGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGGAGATGCTAGAGACCTaGTCATCTGTTCCACCGGGA +
Preference number: 5 (lower is better)
Translates to: GQTSIRSPSCHLDKLRQGEMLET*SSVPPG
Trigger: TCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTC...CCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCATCCTCATCCAGGCCTaGTTCCCCCGTGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTIILIQA*FPRGKL
Trigger: AAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGAT...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GTGGCTTTCACAGACCCCATCAACATCCTCATCCAGGCCTTGTTCCCCCGTGGGCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 5 (lower is better)
Translates to: VAFTDPINILIQALFPRGQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...CCCACGGGGGAACAAGGCCTGGATGAGGATGTTGATGGGGTCTGTGAAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TGCGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAGGGACAGCACCAGCCCTTTTGGGTAACTCGATTCTaGAAGCTCCATAACATCCAT +
Preference number: 5 (lower is better)
Translates to: CAVSQQRLLSQQGQHQPFWVTRF*KLHNIH
Trigger: ATGGATGTTATGGAGCTTCAAGAATCGAGTTACCCA...AAAGGGCTGGTGCTGTCCCTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTGAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATCAGCCAGGACACAGGTaGCCAAACTGCACCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LNCIPDQGLRGFHRPHQHQPGHR*PNCTSN
Trigger: GTTCGAGGTGCAGTTTGGCAACCTGTGTCCTGGCTG...ATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS TCA 90 bp TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTaGAGAACATGTGGATCTCTTCCCGAAGGAAAAGGTCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: CPEDPWPLCWFSGLL*RTCGSLPEGKGPRR
Trigger: TCTCCTGGGACCTTTTCCTTCGGGAAGAGATCCACATGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS-3UTR CAA 90 bp GAACGATCCGGACCTCCCAGCAAGAGCGCACTGGAGAAACCTACCTGCGGCGTGAAATGCCAGCTCTTGTaGGATCGCCTTCTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ERSGPPSKSALEKPTCGVKCQLL*DRLLPL
Trigger: TAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATTT...CACGCCGCAGGTAGGTTTCTCCAGTGCGCTCTTGCTGGGAGGTCCGGATCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGCGCCATCCTGAGGGTTaGGGAAGCCGGAGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: AFTPRHLVNSYLGTLARERHPEG*GSRSSV
Trigger: CACGGAGCTCCGGCTTCCCAAACCCTCAGGATGGCG...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TTGTGCAGTCCTGCGGGCCTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: LCSPAGLMLSRSWPDKHPCQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...CGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAGGCCCGCAGGACTGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ATCCTCACGAGCCCCATGCAGGACTCTGCTGGTGTCAGCCTGGAGCTGATTCCATGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: ILTSPMQDSAGVSLELIPCQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...TGGAATCAGCTCCAGGCTGACACCAGCAGAGTCCTGCATGGGGCTCGTGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCCATAAGAGGTTGTGGTGCCCATTCCAGCAAGAACATGCTGCTTGGCTGTCCGCGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: AIRGCGAHSSKNMLLGCPRRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...CGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CAA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCCGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPRRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGGAGGGAGGGCGGGAGTaGGGTGCTGACAATCAGTCC +
Preference number: 5 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVEGGRE*GADNQS
Trigger: GGACTGATTGTCAGCACCCAACTCCCGCCCTCCCTC...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGGAGGGAGGGCGGGAGTaGGGTGCTGACAATCAGTCC +
Preference number: 5 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKEGGRE*GADNQS
Trigger: GGACTGATTGTCAGCACCCAACTCCCGCCCTCCCTC...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAATCCTCATCCAGGCCTaGTTCCCCCGTGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPILIQA*FPRGKL
Trigger: AAGCTTCCCACGGGGGAACAAGGCCTGGATGAGGAT...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTCAGCACCCTGACAGTTaGCTGAGCCTGAACTGCATT +
Preference number: 5 (lower is better)
Translates to: SYLGTLAREEPAARPTCSQHPDS*LSLNCI
Trigger: AATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTG...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCC +
Preference number: 5 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKVSWMG*QQAYTA
Trigger: GGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGAC...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCC +
Preference number: 5 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVVSWMG*QQAYTA
Trigger: GGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGAC...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GAACTGCATTCCAGACCAGGGGCTGCGTGGCTTTCACAGACCCCATCAACATCCAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: ELHSRPGAAWLSQTPSTSKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...GGATGTTGATGGGGTCTGTGAAAGCCACGCAGCCCCTGGTCTGGAATGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATTGCCAACTTGGAAGCTaGTGGCACCAATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDCQLGS*WHQFKL
Trigger: CAGCTTGAATTGGTGCCACAAGCTTCCAAGTTGGCA...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 5 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TCACAGATCCGGCACCTCGCTGTGCAGTCACACCGCCTACCACCACCTGGTGTGTGGGTAACTCGATTCTaGAAGCTCCATAACATCCAT +
Preference number: 5 (lower is better)
Translates to: SQIRHLAVQSHRLPPPGVWVTRF*KLHNIH
Trigger: ATGGATGTTATGGAGCTTCAAGAATCGAGTTACCCA...CACACCAGGTGGTGGTAGGCGGTGTGACTGCACAGCGAGGTGCCGGATCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCGGTGATACAGGTGGCTaGATGTCTGACCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: LQIMARQASVLLPAIWTSGDTGG*MSDQVP
Trigger: TGGAACCTGGTCAGACATCAAGCCACCTGTATCACC...GCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS CCA 90 bp AAGACCTACATGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTaGTCTCCTGTGAAGAACATGTGGATCTCTTCCCGAAGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: KTYMPRGPVAVVLVF*SPVKNMWISSRRKR
Trigger: CCTTTTCCTTCGGGAAGAGATCCACATGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCATGTAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS CCA 90 bp CACTGGGGGTGGCTGGATAGACTGAGAGGGAGTGAAGGACAGGAGTaGGATGTGACACGAAGTGACAGGAAGCCTGACAGTCATTTCATA +
Preference number: 5 (lower is better)
Translates to: HWGWLDRLRGSEGQE*DVTRSDRKPDSHFI
Trigger: TATGAAATGACTGTCAGGCTTCCTGTCACTTCGTGTCACATCCCACTCCTGTCCTTCACTCCCTCTCAGTCTATCCAGCCACCCCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS-3UTR CAA 90 bp TGGGGTGGTCCAGGCCATGGATTCCACATGGCCAGTGGCGTTTTCTTTCAGGGCAAATGCCAGCTCTTGTaGGATCGCCTTCTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: WGGPGHGFHMASGVFFQGKCQLL*DRLLPL
Trigger: TAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATTT...GCCCTGAAAGAAAACGCCACTGGCCATGTGGAATCCATGGCCTGGACCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGAACAAATGCCAGCTCTaGTTGGATCGCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: AGNMSPGWGCNRRTQPWRNKCQL*LDRLLP
Trigger: AGGAAGAAGGCGATCCAACAAGAGCTGGCATTTGTT...CCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTGAGGGAGGGCGGGAGTaGGGTGCTGACAATCAGTCC +
Preference number: 5 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLAEGGRE*GADNQS
Trigger: GGACTGATTGTCAGCACCCAACTCCCGCCCTCCCTC...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CAGTCACACCGCCTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATA +
Preference number: 5 (lower is better)
Translates to: QSHRLPPPGVGVEHTHSGLMASS*VTKTGI
Trigger: TATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAG...CCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAGGCGGTGTGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGCCACCTGCGGCAGGTTaGCCATCAGCAAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALPPAAG*PSASSE
Trigger: TTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTGG...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GGAACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCACGCAGGTTGGTCCTGTaGTCACTGAATTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GTAGDMKYLRLSMAEREPRRLVL*SLNSQG
Trigger: GCCCTGAGAATTCAGTGACAACAGGACCAACCTGCG...TGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACACAATCTCCTGGCACTaGACCGAGCAGTCTCACAAT +
Preference number: 5 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNTISWH*TEQSHN
Trigger: ATTGTGAGACTGCTCGGTCAAGTGCCAGGAGATTGT...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CAA 90 bp GGGGCTTGGCTGCTATGGCCAGGATGGTCTTCGAGCTGCTCTTGGGCTCCATGCAAAGAAATTTCTAGCTaGTCTAGTTCAAACCCATCC +
Preference number: 5 (lower is better)
Translates to: GAWLLWPGWSSSCSWAPCKEISS*SSSNPS
Trigger: GGATGGGTTTGAACTAGACAAGCTAGAAATTTCTTT...GCATGGAGCCCAAGAGCAGCTCGAAGACCATCCTGGCCATAGCAGCCAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR CAA 90 bp ATAATCTGGACATTCGGGGGCAATGCCGCTCCATGTTCCTGCGGGGCATCCTCTTTCCACTTCCCTTCCTaGCAGGTTCTTCAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: IIWTFGGNAAPCSCGASSFHFPS*QVLQFH
Trigger: ATGAAACTGAAGAACCTGCAAGGAAGGGAAGTGGAA...AGAGGATGCCCCGCAGGAACATGGAGCGGCATTGCCCCCGAATGTCCAGATTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439453.5
CDS-3UTR CAA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATAGTCACAACTGCCACTaGGTTAGTTTTCACTCAGCA +
Preference number: 5 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDSHNCH*VSFHSA
Trigger: TGCTGAGTGAAAACTAACCAAGTGGCAGTTGTGACT...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CAA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCAACAAATGCCAGCTCTaGTTGGATCGCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTINKCQL*LDRLLP
Trigger: AGGAAGAAGGCGATCCAACAAGAGCTGGCATTTGTT...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTGAATGCGGTCGTAATGTGTGAAGTTGTAGGTGCTGCTCGTGGAGGCTGCCTCAACAAATGCCAGCTCTaGTTGGATCGCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LNAVVMCEVVGAARGGCLNKCQL*LDRLLP
Trigger: AGGAAGAAGGCGATCCAACAAGAGCTGGCATTTGTT...GAGGCAGCCTCCACGAGCAGCACCTACAACTTCACACATTACGACCGCATTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATGGTGTTTTTCAGAATTaGCTCGATGAAGGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDGVFQN*LDEGVP
Trigger: TGGGACACCTTCATCGAGCAAATTCTGAAAAACACC...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGATCCCCCGTGGGAAGCTaGTTTCCTCTCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRSPVGS*FPLCPG
Trigger: TCCAGGACAGAGAGGAAACAAGCTTCCCACGGGGGA...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGCCACCTGCGGCAGGTTaGCCATCAGCAAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVPPAAG*PSASSE
Trigger: TTCAGAGCTTGCTGATGGCAAACCTGCCGCAGGTGG...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGGACAAGCTTCGTCAGGGGAAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 5 (lower is better)
Translates to: ARQASVLLPAIWTSFVRGKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...TCCCCTGACGAAGCTTGTCCAGATGGCAGGAAGGAGAACGGATGCTTGTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCTGGAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCTAGCCCTTGGAAGCTaGTTTCAAGAAAAAGACACC +
Preference number: 5 (lower is better)
Translates to: AGNMSPGWGCNRRTQPWRLALGS*FQEKDT
Trigger: GGTGTCTTTTTCTTGAAACAAGCTTCCAAGGGCTAG...CCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGTCAAACATCAGTGCCTaGGCTCGGAGTAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVSNISA*ARSSQA
Trigger: TGCCTGGCTACTCCGAGCCAAGGCACTGATGTTTGA...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CAA 90 bp ATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCCGGACAATGACATTATAAAGTaGTCTTCGCTGGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: IQPSGLRVLPLPCRNDPDNDIIK*SSLAWY
Trigger: GTACCAGGCCAGCGAAGACAACTTTATAATGTCATT...GTCCGGATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CAA 90 bp TCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCCACTTGTAGTGCTCAAAGCTTTAGTTaGGTCCAAGTTCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SYLGTLAREEPAARPTCSAQSFS*VQVPEG
Trigger: TCCCTCTGGAACTTGGACCAAACTAAAGCTTTGAGC...ACTACAAGTGGGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR CAA 90 bp TCCAACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGCTCAAAGCTTTAGTTaGGTCCAAGTTCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SNRIQPSGLRVLPLPCRNAQSFS*VQVPEG
Trigger: TCCCTCTGGAACTTGGACCAAACTAAAGCTTTGAGC...GTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS-3UTR CAA 90 bp CTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTGAAAAGGGGAAAGGGTaGTACAGAACAGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: LMLSRSWPDKHPFSFLPSEKGKG*YRTAGQ
Trigger: CTGTCCAGCTGTTCTGTACAACCCTTTCCCCTTTTC...AGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS CCA 90 bp ACTAGACTTGGAGATAGTGGAAGAGTTGGCCCTGTGTCTTTGTCATaGCACAAAGGTGTGCACTGCGTGACAATGACCCAAGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: TRLGDSGRVGPVSLS*HKGVHCVTMTQASV
Trigger: CACACTGGCTTGGGTCATTGTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCACTATCTCCAAGTCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS-3UTR CAA 90 bp ACAGAATTCAACCAAGTGGTCTCCGTGTGCTGCCGCTTCCCTGCAGGAACGATCAGTCACAACTGCCACTaGGTTAGTTTTCACTCAGCA +
Preference number: 5 (lower is better)
Translates to: TEFNQVVSVCCRFPAGTISHNCH*VSFHSA
Trigger: TGCTGAGTGAAAACTAACCAAGTGGCAGTTGTGACT...GATCGTTCCTGCAGGGAAGCGGCAGCACACGGAGACCACTTGGTTGAATTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CAA 90 bp CTCCATAACATCCATTTTCCATGTTCCTGCGGGGCATCCTCTCCCGTAGGGAGTAACAAATGCCAGCTCTaGTTGGATCGCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LHNIHFPCSCGASSPVGSNKCQL*LDRLLP
Trigger: AGGAAGAAGGCGATCCAACAAGAGCTGGCATTTGTT...ACTCCCTACGGGAGAGGATGCCCCGCAGGAACATGGAAAATGGATGTTATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429411.5
CDS-3UTR CAA 90 bp CTACCACCACCTGGTGTGGGGGTTGAACACACACACTCTGGGCTAGTGGACGATCTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATA +
Preference number: 5 (lower is better)
Translates to: LPPPGVGVEHTHSGLVDDLMASS*VTKTGI
Trigger: TATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAG...ATCGTCCACTAGCCCAGAGTGTGTGTGTTCAACCCCCACACCAGGTGGTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTGTCCTGCACACTGCCTTCCCTTGGGAAACATGGCCATAAGAGGTTGTGGTGCAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 5 (lower is better)
Translates to: LSCTLPSLGKHGHKRLWCKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...GCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGCAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CAA 90 bp GTTCTTTATCAAGTGCTCTGGGTCTGCCGACCTGAAGAACTAACCCCTGCCCCCAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 5 (lower is better)
Translates to: VLYQVLWVCRPEELTPAPKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...GGGGGCAGGGGTTAGTTCTTCAGGTCGGCAGACCCAGAGCACTTGATAAAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGAGACAACGTGAGACATaGCGGGGACTTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKRQRET*RGLPGA
Trigger: AGCTCCAGGAAGTCCCCGCAATGTCTCACGTTGTCT...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS GCA 90 bp ACATACTGGCAGCTATGCAATGTGCTCTGCATACAGTCTCTGCTTTaGCCCTCACATAAGCTCTGCAGTGGTGGTATGGTCCCATTTCAC +
Preference number: 5 (lower is better)
Translates to: TYWQLCNVLCIQSLL*PSHKLCSGGMVPFH
Trigger: GTGAAATGGGACCATACCACCACTGCAGAGCTTATGTGAGGGGCAAAGCAGAGACTGTATGCAGAGCACATTGCATAGCTGCCAGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS CCA 90 bp TCCCGTAGGGAGTCTCTGAAAACAAACACACACAGAAGTTGGCGCTaGGCACCACATTCTCCTCTTGACCTAACCATCAGGAATTTGCTG +
Preference number: 5 (lower is better)
Translates to: SRRESLKTNTHRSWR*APHSPLDLTIRNLL
Trigger: CAGCAAATTCCTGATGGTTAGGTCAAGAGGAGAATGTGGTGCCCAGCGCCAACTTCTGTGTGTGTTTGTTTTCAGAGACTCCCTACGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 90 bp ATCCTCTCCCGTAGGGAGTCTCTGAAAACAAACACACACAGAAGTTaGCGCTGGGCACCACATTCTCCTCTTGACCTAACCATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: ILSRRESLKTNTHRS*RWAPHSPLDLTIRN
Trigger: ATTCCTGATGGTTAGGTCAAGAGGAGAATGTGGTGCCCAGCGCCAACTTCTGTGTGTGTTTGTTTTCAGAGACTCCCTACGGGAGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS-3UTR CAA 90 bp TCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGGAACCAGCTGCACGGCCGGTGTTTTTCAGAATTaGCTCGATGAAGGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: SCKLLFRDTRSRGTSCTAGVFQN*LDEGVP
Trigger: TGGGACACCTTCATCGAGCAAATTCTGAAAAACACC...GGCCGTGCAGCTGGTTCCTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTAGAGGGCTCCACTTTAGTTaGGTCCAAGTTCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: FHIIKACPHCGSKEDAPRGLHFS*VQVPEG
Trigger: TCCCTCTGGAACTTGGACCAAACTAAAGTGGAGCCC...TCTAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
CDS-3UTR CAA 90 bp GCCATAAGAGGTTGTGGTGCCCATTCCAGCAAGAACATGCTGCTTGGCTGTCCGCTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATA +
Preference number: 5 (lower is better)
Translates to: AIRGCGAHSSKNMLLGCPLMASS*VTKTGI
Trigger: TATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAG...CGGACAGCCAAGCAGCATGTTCTTGCTGGAATGGGCACCACAACCTCTTATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CAA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGGAGATGCTAGAGACCTaGTCATCTGTTCCACCGGGA +
Preference number: 5 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEEMLET*SSVPPG
Trigger: TCCCGGTGGAACAGATGACAAGGTCTCTAGCATCTC...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CGTAATAGAACTGAGGTTCTAAGTACCACACAAGCCCAGGAACACACAGCTGAGCAGCACCCTGACAGTTaGCTGAGCCTGAACTGCATT +
Preference number: 5 (lower is better)
Translates to: RNRTEVLSTTQAQEHTAEQHPDS*LSLNCI
Trigger: AATGCAGTTCAGGCTCAGCAAACTGTCAGGGTGCTG...CTCAGCTGTGTGTTCCTGGGCTTGTGTGGTACTTAGAACCTCAGTTCTATTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GAAATATGTCTCCTGGATGGGGTTGCAACAGGCGTACACAGCCGTGGAGGCATTAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 5 (lower is better)
Translates to: EICLLDGVATGVHSRGGIKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...AATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTGATGCTCTCCAGATCATGGCCAGACAAGCATCCGTTCTCCTTCCTGCCATCTAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 5 (lower is better)
Translates to: LMLSRSWPDKHPFSFLPSKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...AGATGGCAGGAAGGAGAACGGATGCTTGTCTGGCCATGATCTGGAGAGCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTGAGGGAGACACAGGCTaGGTGTATTGGATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLAEGDTG*VYWISC
Trigger: GCAGCTGATCCAATACACCAAGCCTGTGTCTCCCTC...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS GCA 90 bp TGGGCACCACATTCTCCTCTTGACCTAACCATCAGGAATTTGCTGTaGCATCTGTTCATAAAACTTAGCCAGGCCCAGAAAGCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: WAPHSPLDLTIRNLL*HLFIKLSQAQKACP
Trigger: GGGACAAGCTTTCTGGGCCTGGCTAAGTTTTATGAACAGATGGCACAGCAAATTCCTGATGGTTAGGTCAAGAGGAGAATGTGGTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 90 bp GCTCTTTCACTCGGGGAAATATGCCTCAGTTCCACATTCCTTGTATaGAGTCAGGGGCCTAGAAGTCCTTTAGTTTGGTCCAAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ALSLGEICLSSTFLV*SQGPRSPLVWSKFQ
Trigger: CTGGAACTTGGACCAAACTAAAGGACTTCTAGGCCCCTGACTCCATACAAGGAATGTGGAACTGAGGCATATTTCCCCGAGTGAAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS-3UTR CAA 90 bp CCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGAAGGCAGAGCTTCCTTaGCTGGTTTTCTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: PKLPSILLRLAPIVGPKKKAELP*LVFSFP
Trigger: TGGGAAGGAGAAAACCAGCAAAGGAAGCTCTGCCTT...CTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CTGTCCTGCACACTGCCTTCCCTTGGGAAACATGGCCATAAGAGGTTGTGGTGCTTGTACGGTTCCATTTaGGGTCAGTGGAAGAATTTT +
Preference number: 5 (lower is better)
Translates to: LSCTLPSLGKHGHKRLWCLYGSI*GQWKNF
Trigger: AAAATTCTTCCACTGACCCAAAATGGAACCGTACAA...GCACCACAACCTCTTATGGCCATGTTTCCCAAGGGAAGGCAGTGTGCAGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS CCA 90 bp TTGCTTCAGAGACTCCTTTCTGGCCTAACAGCGCATTCCTTTGATTaGTCCTTGAGTGACCAGAGACTTAGTGCCCTTGTAAGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LLQRLLSGLTAHSFD*SLSDQRLSALVSLS
Trigger: AGACAGACTTACAAGGGCACTAAGTCTCTGGTCACTCAAGGACCAATCAAAGGAATGCGCTGTTAGGCCAGAAAGGAGTCTCTGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519774.5
CDS-3UTR CAA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGTTCCACTTCCCTTCCTaGCAGGTTCTTCAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKFHFPS*QVLQFH
Trigger: ATGAAACTGAAGAACCTGCAAGGAAGGGAAGTGGAA...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS-3UTR CAA 90 bp CCAAGCCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGGGTGTTTTTCAGAATTaGCTCGATGAAGGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: PSPSRPQHYRLNTVLYQVGVFQN*LDEGVP
Trigger: TGGGACACCTTCATCGAGCAAATTCTGAAAAACACC...CACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp TTCCTTTGCTGGTTTTCTCCTTCCCAGTCACCTCCTGGGTGCAGTTCAGAGCAACTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATA +
Preference number: 5 (lower is better)
Translates to: FLCWFSPSQSPPGCSSEQLMASS*VTKTGI
Trigger: TATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAG...TTGCTCTGAACTGCACCCAGGAGGTGACTGGGAAGGAGAAAACCAGCAAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCCGTGGGAAGCTTGTTTCCTCTCTGTCCTGGATCTAAGCGAGGCAATAACAAGCTAATGGCTTCCTCTTaGGTCACAAAAACAGGGATA +
Preference number: 5 (lower is better)
Translates to: PVGSLFPLCPGSKRGNNKLMASS*VTKTGI
Trigger: TATCCCTGTTTTTGTGACCAAAGAGGAAGCCATTAG...CTTGTTATTGCCTCGCTTAGATCCAGGACAGAGAGGAAACAAGCTTCCCACGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ACACCACTATTAATCACTCATGCGACCTTTATCCTTACAGTTCACAGGTGGCAGCAAAGGCAGCGCAGGTaGGTCCTGTTGTCACTGAAT +
Preference number: 5 (lower is better)
Translates to: TPLLITHATFILTVHRWQQRQRR*VLLSLN
Trigger: ATTCAGTGACAACAGGACCAACCTGCGCTGCCTTTG...CTGCCACCTGTGAACTGTAAGGATAAAGGTCGCATGAGTGATTAATAGTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS-3UTR CAA 90 bp CCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAGACGCCCCTACTAGCCCTTGGAAGCTaGTTTCAAGAAAAAGACACC +
Preference number: 5 (lower is better)
Translates to: PSILLRLAPIVGPKKTPLLALGS*FQEKDT
Trigger: GGTGTCTTTTTCTTGAAACAAGCTTCCAAGGGCTAG...TAGGGGCGTCTTCTTTGGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp CCCGTCCCGGCCCCAACACTACCGATTAAATACAGTTCTTTATCAAGTGCTCTGCTAGCCCTTGGAAGCTaGTTTCAAGAAAAAGACACC +
Preference number: 5 (lower is better)
Translates to: PVPAPTLPIKYSSLSSALLALGS*FQEKDT
Trigger: GGTGTCTTTTTCTTGAAACAAGCTTCCAAGGGCTAG...CAGAGCACTTGATAAAGAACTGTATTTAATCGGTAGTGTTGGGGCCGGGACGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS GCA 90 bp GAAGTTTCCAGTTCAAACATCAGTGCCTTGGCTCTTGGCTGTCTCTaGTTTACACCCTCCAGAGATGCGTGGTTCACTATGTTACATTTC +
Preference number: 5 (lower is better)
Translates to: EVSSSNISALALGCL*FTPSRDAWFTMLHF
Trigger: GAAATGTAACATAGTGAACCACGCATCTCTGGAGGGTGTAAAGCAGAGACAGCCAAGAGCCAAGGCACTGATGTTTGAACTGGAAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473782.1
ENST00000479064.5
CDS CCA 90 bp TCCCAGCCCGAGGAGGGCTTATTACTGTGTTTGAAAGCCTTCAGGTaGCCCCAGAGAATAAAGAACCCCAGTAGCTACAAATTAGATAAA +
Preference number: 5 (lower is better)
Translates to: SQPEEGLLLCLKAFR*PQRIKNPSSYKLDK
Trigger: TTTATCTAATTTGTAGCTACTGGGGTTCTTTATTCTCTGGGGCCACCTGAAGGCTTTCAAACACAGTAATAAGCCCTCCTCGGGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402105.7
ENST00000464362.5
CDS-3UTR CAA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAATGCCAGCTCTTGTaGGATCGCCTTCTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSKCQLL*DRLLPL
Trigger: TAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATTT...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GTGGGTCCAAAGAAGACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACAACAAATGCCAGCTCTaGTTGGATCGCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: VGPKKTPLDLSRVPTEFNNKCQL*LDRLLP
Trigger: AGGAAGAAGGCGATCCAACAAGAGCTGGCATTTGTT...GTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTTCTTTGGACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp ACGCCCCTAGATTTGAGTAGAGTTCCAACAGAATTCAACCAAGTGGTCTCCGTGAAGACGCCCCTAGATTaGAGTAGAGTTCCAACAGAA +
Preference number: 5 (lower is better)
Translates to: TPLDLSRVPTEFNQVVSVKTPLD*SRVPTE
Trigger: TTCTGTTGGAACTCTACTCAAATCTAGGGGCGTCTT...CACGGAGACCACTTGGTTGAATTCTGTTGGAACTCTACTCAAATCTAGGGGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCGAGAGCTAGCCCTTGGAAGCTaGTTTCAAGAAAAAGACACC +
Preference number: 5 (lower is better)
Translates to: AFTPRHLVNSYLGTLARELALGS*FQEKDT
Trigger: GGTGTCTTTTTCTTGAAACAAGCTTCCAAGGGCTAG...CTCTCGAGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp AACAGCAGGAGATATGAAATACCTCAGGCTCAGTATGGCAGAGAGGGAGCCAAGTCTGAAAGCAGGGATTaGACAGCATGCCTAAAATCA +
Preference number: 5 (lower is better)
Translates to: NSRRYEIPQAQYGREGAKSESRD*TACLKS
Trigger: TGATTTTAGGCATGCTGTCAAATCCCTGCTTTCAGA...CTTGGCTCCCTCTCTGCCATACTGAGCCTGAGGTATTTCATATCTCCTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS TCA 90 bp AACAAACACACACAGAAGTTGGCGCTGGGCACCACATTCTCCTCTTaGCCTAACCATCAGGAATTTGCTGTGCCATCTGTTCATAAAACT +
Preference number: 5 (lower is better)
Translates to: NKHTQKLALGTTFSS*PNHQEFAVPSVHKT
Trigger: AGTTTTATGAACAGATGGCACAGCAAATTCCTGATGGTTAGGTCAAGAGGAGAATGTGGTGCCCAGCGCCAACTTCTGTGTGTGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 90 bp CAGTGTCAGATTTATAAAGCCGAGGAGTGGTTTGGAATATACAGCTaGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAACAG +
Preference number: 5 (lower is better)
Translates to: QCQIYKAEEWFGIYS*SQVQVQCLDPNGKQ
Trigger: CTGTTTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTTTATAAATCTGACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS-3UTR CAA 90 bp CACAGTGCTTTTACCCCCAGACATCTTGTAAACTCCTATTTAGGGACACTCGCTCTAGCCCTTGGAAGCTaGTTTCAAGAAAAAGACACC +
Preference number: 5 (lower is better)
Translates to: HSAFTPRHLVNSYLGTLALALGS*FQEKDT
Trigger: GGTGTCTTTTTCTTGAAACAAGCTTCCAAGGGCTAG...AGCGAGTGTCCCTAAATAGGAGTTTACAAGATGTCTGGGGGTAAAAGCACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
CDS-3UTR CAA 90 bp GAAAACAGCGGGTTAAGTGTTTCTTCTCTGCAGCCTCTGGGCCACAGTTACCAAAAAGAAATTTCTAGCTaGTCTAGTTCAAACCCATCC +
Preference number: 5 (lower is better)
Translates to: ENSGLSVSSLQPLGHSYQKEISS*SSSNPS
Trigger: GGATGGGTTTGAACTAGACAAGCTAGAAATTTCTTT...TTGGTAACTGTGGCCCAGAGGCTGCAGAGAAGAAACACTTAACCCGCTGTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS CCA 90 bp AGTGTTTTCAGTCACAACTGCCACTTGGTTAGTTTTCACTCAGCATaGAAAGTTCCACTTCCCTTCCTTGCAGGTTCTTCAGTTTCATGT +
Preference number: 5 (lower is better)
Translates to: SVFSHNCHLVSFHSA*KVPLPFLAGSSVSC
Trigger: ACATGAAACTGAAGAACCTGCAAGGAAGGGAAGTGGAACTTTCCATGCTGAGTGAAAACTAACCAAGTGGCAGTTGTGACTGAAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000422379.2
ENST00000439453.5
ENST00000466781.5
ENST00000473782.1
ENST00000479064.5
ENST00000483631.1
CDS-3UTR CAA 90 bp TCTAAAGCCCAAACTCCCTTCCATATTATTAAGGCTTGCCCCCATTGTGGGTCCAAAGAAATTTCTAGCTaGTCTAGTTCAAACCCATCC +
Preference number: 5 (lower is better)
Translates to: SKAQTPFHIIKACPHCGSKEISS*SSSNPS
Trigger: GGATGGGTTTGAACTAGACAAGCTAGAAATTTCTTT...GGACCCACAATGGGGGCAAGCCTTAATAATATGGAAGGGAGTTTGGGCTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000439453.5
CDS GCA 90 bp TCCACTTTAGTTTGGTCCAAGTTCCAGAGGGAATTGAAAATCTTATaGAGATCACTGGTGTTTTTCAGAATTTGCTCGATGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: STLVWSKFQRELKIL*RSLVFFRICSMKVS
Trigger: GGACACCTTCATCGAGCAAATTCTGAAAAACACCAGTGATCTGCATAAGATTTTCAATTCCCTCTGGAACTTGGACCAAACTAAAGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000422379.2
ENST00000466781.5
ENST00000485842.5
ENST00000496385.5
CDS GCA 90 bp AGTCCTTTAGTTTGGTCCAAGTTCCAGAGGGAATTGAAAATCTTATaGAGATCACTGGTGTTTTTCAGAATTTGCTCGATGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SPLVWSKFQRELKIL*RSLVFFRICSMKVS
Trigger: GGACACCTTCATCGAGCAAATTCTGAAAAACACCAGTGATCTGCATAAGATTTTCAATTCCCTCTGGAACTTGGACCAAACTAAAGGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS GCA 90 bp AAAGCTTTAGTTTGGTCCAAGTTCCAGAGGGAATTGAAAATCTTATaGAGATCACTGGTGTTTTTCAGAATTTGCTCGATGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: KALVWSKFQRELKIL*RSLVFFRICSMKVS
Trigger: GGACACCTTCATCGAGCAAATTCTGAAAAACACCAGTGATCTGCATAAGATTTTCAATTCCCTCTGGAACTTGGACCAAACTAAAGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS GCA 90 bp CATGATTTAGTTTGGTCCAAGTTCCAGAGGGAATTGAAAATCTTATaGAGATCACTGGTGTTTTTCAGAATTTGCTCGATGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: HDLVWSKFQRELKIL*RSLVFFRICSMKVS
Trigger: GGACACCTTCATCGAGCAAATTCTGAAAAACACCAGTGATCTGCATAAGATTTTCAATTCCCTCTGGAACTTGGACCAAACTAAATCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459918.1
CDS GCA 72 bp GCAGCAGCTGGGTACCTGCGACTTCTGCCCCGTACCTaGGCGCGCGGCAGAGAGGCCTTAGGTCACGCGCCG +
Preference number: 6 (lower is better)
Translates to: AAAGYLRLLPRT*ARGREALGHAP
Trigger: CGGCGCGTGACCTAAGGCCTCTCTGCCGCGCGCGCAGGTACGGGGCAGAAGTCGCAGGTACCCAGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479064.5
CDS GCA 72 bp ACATCTGCCTCCCACTCGCTAGTCTGGATAACGCTCTaGGCGCGCGGCAGAGAGGCCTTAGGTCACGCGCCG +
Preference number: 6 (lower is better)
Translates to: TSASHSLVWITL*ARGREALGHAP
Trigger: CGGCGCGTGACCTAAGGCCTCTCTGCCGCGCGCGCAGAGCGTTATCCAGACTAGCGAGTGGGAGGCAGATGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473782.1
CDS GCA 72 bp CAGCAGAGATCCTGCGGCGTGGGAGTGGAGTCGGCCTaGTCACAGATCCGGCACCTCGCTGTGCAGTCACAC +
Preference number: 6 (lower is better)
Translates to: QQRSCGVGVESA*SQIRHLAVQSH
Trigger: GTGTGACTGCACAGCGAGGTGCCGGATCTGTGAGCAGGCCGACTCCACTCCCACGCCGCAGGATCTCTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491142.1
CDS CCA 72 bp GGTTCGGGACTCTGGACCAGAAATGTGGGCAGCAGCTaGGTACCTGCGACTTCTGCCCCGTACCTGCGCGCG +
Preference number: 6 (lower is better)
Translates to: GSGLWTRNVGSS*VPATSAPYLRA
Trigger: CGCGCGCAGGTACGGGGCAGAAGTCGCAGGTACCCAGCTGCTGCCCACATTTCTGGTCCAGAGTCCCGAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398145.7
ENST00000479064.5
CDS CCA 72 bp GTAGCCAGGCATCCCAGTGCTCGGGGTTCGGGACTCTaGACCAGAAATGTGGGCAGCAGCTGGGTACCTGCG +
Preference number: 6 (lower is better)
Translates to: VARHPSARGSGL*TRNVGSSWVPA
Trigger: CGCAGGTACCCAGCTGCTGCCCACATTTCTGGTCCAGAGTCCCGAACCCCGAGCACTGGGATGCCTGGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398145.7
ENST00000479064.5
CDS GCA 72 bp ATCAGTGCCTTGGCTCGGAGTAGCCAGGCATCCCAGTaGTCGGGGTTCGGGACTCTGGACCAGAAATGTGGG +
Preference number: 6 (lower is better)
Translates to: ISALARSSQASQ*SGFGTLDQKCG
Trigger: CCCACATTTCTGGTCCAGAGTCCCGAACCCCGAGCACTGGGATGCCTGGCTACTCCGAGCCAAGGCACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398145.7
CDS GCA 72 bp ACAAGGACCCTGAGGCTCAGAGTGAGTAGCTGGGGCTaGCCTGCCTCTATGACGAGGCAATGGCAGTGTCCG +
Preference number: 6 (lower is better)
Translates to: TRTLRLRVSSWG*PASMTRQWQCP
Trigger: CGGACACTGCCATTGCCTCGTCATAGAGGCAGGGCAGCCCCAGCTACTCACTCTGAGCCTCAGGGTCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS GCA 72 bp TACACAGCCGTGGAGGCATTTCACTTCCTCTATGGCTaGGCTGTCTCCCAGCAGCGGCTCCTCAGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: YTAVEAFHFLYG*AVSQQRLLSQQ
Trigger: CTGCTGGCTGAGGAGCCGCTGCTGGGAGACAGCGCAGCCATAGAGGAAGTGAAATGCCTCCACGGCTGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496385.5
CDS GCA 72 bp GTGAGGCGAGCGCTGGCAGGTCTGCAGAATGCGGGCTaGCTTCAGCAACAACAGGGGCTCCACTTTAGTTTG +
Preference number: 6 (lower is better)
Translates to: VRRALAGLQNAG*LQQQQGLHFSL
Trigger: CAAACTAAAGTGGAGCCCCTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000422379.2
ENST00000466781.5
ENST00000485842.5
ENST00000496385.5
CDS GCA 72 bp AGTCTGGATAACGCTCGGAGTAGCCAGGCATCCCAGTaGTCGGGGTTCGGGACTCTGGACCAGAAATGTGGG +
Preference number: 6 (lower is better)
Translates to: SLDNARSSQASQ*SGFGTLDQKCG
Trigger: CCCACATTTCTGGTCCAGAGTCCCGAACCCCGAGCACTGGGATGCCTGGCTACTCCGAGCGTTATCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479064.5
CDS GCA 72 bp AACAGGGGCTCCACCTGTGCAGGGCAAGAGGCATCATaGCCACCCATCAGCATGCTCACAATCAGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: NRGSTCAGQEAS*PPISMLTIRKG
Trigger: TCCCTTCCTGATTGTGAGCATGCTGATGGGTGGGCATGATGCCTCTTGCCCTGCACAGGTGGAGCCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429411.5
ENST00000439453.5
CDS GCA 72 bp CCAGGTGGGTGGACTTTACAATACCTGCTCCTGAGGTaGTGTTCGGTGAAGCAGGACCTTGGCGGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: PGGWTLQYLLLR*CSVKQDLGGEG
Trigger: TCCCTCACCGCCAAGGTCCTGCTTCACCGAACAGCACCTCAGGAGCAGGTATTGTAAAGTCCACCCACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 72 bp AGTAGCTGGGGCTGCCCTGCCTCTATGACGAGGCAATaGCAGTGTCCGAGAAAGGAGTCTAGTCTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSWGCPASMTRQ*QCPRKESSLLS
Trigger: GGAGAGCAGACTAGACTCCTTTCTCGGACACTGCCATTGCCTCGTCATAGAGGCAGGGCAGCCCCAGCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS CCA 72 bp GTTCCAGATTTTACATCTGCCTCCCACTCGCTAGTCTaGATAACGCTCTGCGCGCGCGGCAGAGAGGCCTTA +
Preference number: 6 (lower is better)
Translates to: VPDFTSASHSLV*ITLCARGREAL
Trigger: TAAGGCCTCTCTGCCGCGCGCGCAGAGCGTTATCCAGACTAGCGAGTGGGAGGCAGATGTAAAATCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473782.1
CDS CAA 72 bp GGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCCGTGGAGGCATTTCAC +
Preference number: 6 (lower is better)
Translates to: GASCWKYVSWMG*QQAYTAVEAFH
Trigger: GTGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496385.5
CDS CAA 90 bp CGTGCTGCAGGTGCCAGCTGCTGGAAATATGTCTCCTGGATGGGGTaGCAACAGGCGTACACAGCCGTGGAGGCATTTCACTTCCTCTAT +
Preference number: 6 (lower is better)
Translates to: RAAGASCWKYVSWMG*QQAYTAVEAFHFLY
Trigger: ATAGAGGAAGTGAAATGCCTCCACGGCTGTGTACGCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCACCTGCAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496385.5
CDS GCA 72 bp CAGTGTGTGCTAGTGAGGAGACAGAGAAGACCTACATaGCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: QCVLVRRQRRPT*PEDPWPLCWFS
Trigger: AGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCATGTAGGTCTTCTCTGTCTCCTCACTAGCACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS CCA 72 bp ATGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTaGTCTCCTGTGAAGAACATGTGGATCTCTTCCCGA +
Preference number: 6 (lower is better)
Translates to: MPRGPVAVVLVF*SPVKNMWISSR
Trigger: TCGGGAAGAGATCCACATGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS CCA 72 bp GTTCCAGATTTTACATCTGCCTCCCACTCGCTAGTCTaGATAACGCTCGGAGTAGCCAGGCATCCCAGTGCT +
Preference number: 6 (lower is better)
Translates to: VPDFTSASHSLV*ITLGVARHPSA
Trigger: AGCACTGGGATGCCTGGCTACTCCGAGCGTTATCCAGACTAGCGAGTGGGAGGCAGATGTAAAATCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479064.5
CDS TCA 72 bp CTACTGAGGAGAATGACATTGGAGGACTTGGGGTCCTaGCAAGACCAAGTGAAACAACTGCTCCACGGCCTC +
Preference number: 6 (lower is better)
Translates to: LLRRMTLEDLGS*QDQVKQLLHGL
Trigger: GAGGCCGTGGAGCAGTTGTTTCACTTGGTCTTGTCAGGACCCCAAGTCCTCCAATGTCATTCTCCTCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 72 bp ACAACTCCAGCAATCTGTCCACAAAGCAACTCCTGTTaGTCTAGCAGGGTCACGAGGCTGACTTTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: TTPAICPQSNSC*SSRVTRLTLPL
Trigger: CAGAGGCAAAGTCAGCCTCGTGACCCTGCTAGACCAACAGGAGTTGCTTTGTGGACAGATTGCTGGAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483631.1
CDS CAA 90 bp ACACAGCTTCCTGTTTCCCAGCCCGAGGAGGGCTTATTACTGTGTTaGAAAGCCTTCAGGTGGCCCCAGAGAATAAAGAACCCCAGTAGC +
Preference number: 6 (lower is better)
Translates to: TQLPVSQPEEGLLLC*KAFRWPQRIKNPSS
Trigger: GCTACTGGGGTTCTTTATTCTCTGGGGCCACCTGAAGGCTTTCAAACACAGTAATAAGCCCTCCTCGGGCTGGGAAACAGGAAGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402105.7
ENST00000464362.5
CDS GCA 72 bp CAGCTATGCAATGTGCTCTGCATACAGTCTCTGCTTTaGCCCTCACATAAGCTCTGCAGTGGTGGTATGGTC +
Preference number: 6 (lower is better)
Translates to: QLCNVLCIQSLL*PSHKLCSGGMV
Trigger: GACCATACCACCACTGCAGAGCTTATGTGAGGGGCAAAGCAGAGACTGTATGCAGAGCACATTGCATAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS CCA 72 bp GGAGATAGTGGAAGAGTTGGCCCTGTGTCTTTGTCATaGCACAAAGGTGTGCACTGCGTGACAATGACCCAA +
Preference number: 6 (lower is better)
Translates to: GDSGRVGPVSLS*HKGVHCVTMTQ
Trigger: TTGGGTCATTGTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCACTATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS CAA 72 bp CCTGTTTCCCAGCCCGAGGAGGGCTTATTACTGTGTTaGAAAGCCTTCAGGTGGCCCCAGAGAATAAAGAAC +
Preference number: 6 (lower is better)
Translates to: PVSQPEEGLLLC*KAFRWPQRIKN
Trigger: GTTCTTTATTCTCTGGGGCCACCTGAAGGCTTTCAAACACAGTAATAAGCCCTCCTCGGGCTGGGAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402105.7
ENST00000464362.5
CDS CAA 90 bp TGGCGCTGGGCACCACATTCTCCTCTTGACCTAACCATCAGGAATTaGCTGTGCCATCTGTTCATAAAACTTAGCCAGGCCCAGAAAGCT +
Preference number: 6 (lower is better)
Translates to: WRWAPHSPLDLTIRN*LCHLFIKLSQAQKA
Trigger: AGCTTTCTGGGCCTGGCTAAGTTTTATGAACAGATGGCACAGCAAATTCCTGATGGTTAGGTCAAGAGGAGAATGTGGTGCCCAGCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS TCA 72 bp ACACAGAAGTTGGCGCTGGGCACCACATTCTCCTCTTaGCCTAACCATCAGGAATTTGCTGTGCCATCTGTT +
Preference number: 6 (lower is better)
Translates to: TQKLALGTTFSS*PNHQEFAVPSV
Trigger: AACAGATGGCACAGCAAATTCCTGATGGTTAGGTCAAGAGGAGAATGTGGTGCCCAGCGCCAACTTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS GCA 72 bp AGTTCAAACATCAGTGCCTTGGCTCTTGGCTGTCTCTaGTTTACACCCTCCAGAGATGCGTGGTTCACTATG +
Preference number: 6 (lower is better)
Translates to: SSNISALALGCL*FTPSRDAWFTM
Trigger: CATAGTGAACCACGCATCTCTGGAGGGTGTAAAGCAGAGACAGCCAAGAGCCAAGGCACTGATGTTTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473782.1
ENST00000479064.5
CDS GCA 72 bp TGCATACAGTCTCTGCTTTGCCCCTCACATAAGCTCTaGAGTGGTGGTATGGTCCCATTTCACAGACAAGGA +
Preference number: 6 (lower is better)
Translates to: CIQSLLCPSHKL*SGGMVPFHRQG
Trigger: TCCTTGTCTGTGAAATGGGACCATACCACCACTGCAGAGCTTATGTGAGGGGCAAAGCAGAGACTGTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485842.5
CDS CCA 72 bp CTCGGGGAAATATGCCTCAGTTCCACATTCCTTGTATaGAGTCAGGGGCCTAGAAGTCCTTTAGTTTGGTCC +
Preference number: 6 (lower is better)
Translates to: LGEICLSSTFLV*SQGPRSPLVWS
Trigger: GGACCAAACTAAAGGACTTCTAGGCCCCTGACTCCATACAAGGAATGTGGAACTGAGGCATATTTCCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS CCA 72 bp GAGTCTCTGAAAACAAACACACACAGAAGTTGGCGCTaGGCACCACATTCTCCTCTTGACCTAACCATCAGG +
Preference number: 6 (lower is better)
Translates to: ESLKTNTHRSWR*APHSPLDLTIR
Trigger: CCTGATGGTTAGGTCAAGAGGAGAATGTGGTGCCCAGCGCCAACTTCTGTGTGTGTTTGTTTTCAGAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CAA 72 bp AGACTTGGAGATAGTGGAAGAGTTGGCCCTGTGTCTTaGTCATGGCACAAAGGTGTGCACTGCGTGACAATG +
Preference number: 6 (lower is better)
Translates to: RLGDSGRVGPVS*SWHKGVHCVTM
Trigger: CATTGTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCACTATCTCCAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS GCA 72 bp GGCTCTTGGCTGTCTCTGCTTTACACCCTCCAGAGATaGGTGGTTCACTATGTTACATTTCTCCTTCCAACA +
Preference number: 6 (lower is better)
Translates to: GSWLSLLYTLQR*VVHYVTFLLPT
Trigger: TGTTGGAAGGAGAAATGTAACATAGTGAACCACGCATCTCTGGAGGGTGTAAAGCAGAGACAGCCAAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473782.1
ENST00000479064.5
CDS CCA 72 bp AGACTCCTTTCTGGCCTAACAGCGCATTCCTTTGATTaGTCCTTGAGTGACCAGAGACTTAGTGCCCTTGTA +
Preference number: 6 (lower is better)
Translates to: RLLSGLTAHSFD*SLSDQRLSALV
Trigger: TACAAGGGCACTAAGTCTCTGGTCACTCAAGGACCAATCAAAGGAATGCGCTGTTAGGCCAGAAAGGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519774.5
CDS CAA 72 bp ATGAGCAGTGTCAGATTTATAAAGCCGAGGAGTGGTTaGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGT +
Preference number: 6 (lower is better)
Translates to: MSSVRFIKPRSG*EYTAGRRCRSS
Trigger: ACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTTTATAAATCTGACACTGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS CAA 90 bp CAGAGACTCCTTTCTGGCCTAACAGCGCATTCCTTTGATTGGTCCTaGAGTGACCAGAGACTTAGTGCCCTTGTAAGTCTGTCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: QRLLSGLTAHSFDWS*SDQRLSALVSLSSV
Trigger: AACAGAAGACAGACTTACAAGGGCACTAAGTCTCTGGTCACTCAAGGACCAATCAAAGGAATGCGCTGTTAGGCCAGAAAGGAGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519774.5
CDS GCA 72 bp GGTCTAGCAGGGTCTGGGAAGGATAAAAGTAACAAATaGCAGCTCTTGTTGGATCGCCTTCTTCCTTTACCT +
Preference number: 6 (lower is better)
Translates to: GLAGSGKDKSNK*QLLLDRLLPLP
Trigger: AGGTAAAGGAAGAAGGCGATCCAACAAGAGCTGGCATTTGTTACTTTTATCCTTCCCAGACCCTGCTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000422379.2
ENST00000429411.5
ENST00000439453.5
ENST00000464362.5
ENST00000466781.5
ENST00000481910.1
ENST00000496385.5
CDS CAA 72 bp GCACCACATTCTCCTCTTGACCTAACCATCAGGAATTaGCTGTGCCATCTGTTCATAAAACTTAGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: APHSPLDLTIRN*LCHLFIKLSQA
Trigger: GGCCTGGCTAAGTTTTATGAACAGATGGCACAGCAAATTCCTGATGGTTAGGTCAAGAGGAGAATGTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CAA 90 bp ACTCTTATTAAACGTTTTGAAGTTTCCAGTTCAAACATCAGTGCCTaGGCTCTTGGCTGTCTCTGCTTTACACCCTCCAGAGATGCGTGG +
Preference number: 6 (lower is better)
Translates to: TLIKRFEVSSSNISA*ALGCLCFTPSRDAW
Trigger: CCACGCATCTCTGGAGGGTGTAAAGCAGAGACAGCCAAGAGCCAAGGCACTGATGTTTGAACTGGAAACTTCAAAACGTTTAATAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473782.1
ENST00000479064.5
CDS TCA 72 bp GCAGCTCCACCCAAACTCACATCACACTCTACGTTCTaGTTTTCTCAGTCTCTCTCCCTTCTGGGAATAAAA +
Preference number: 6 (lower is better)
Translates to: AAPPKLTSHSTF*FSQSLSLLGIK
Trigger: TTTTATTCCCAGAAGGGAGAGAGACTGAGAAAATCAGAACGTAGAGTGTGATGTGAGTTTGGGTGGAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 72 bp AGTCACAACTGCCACTTGGTTAGTTTTCACTCAGCATaGAAAGTTCCACTTCCCTTCCTTGCAGGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: SHNCHLVSFHSA*KVPLPFLAGSS
Trigger: TGAAGAACCTGCAAGGAAGGGAAGTGGAACTTTCCATGCTGAGTGAAAACTAACCAAGTGGCAGTTGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000422379.2
ENST00000439453.5
ENST00000466781.5
ENST00000473782.1
ENST00000479064.5
ENST00000483631.1
CDS CCA 72 bp CTTGGCTGTCTCTGCTTTACACCCTCCAGAGATGCGTaGTTCACTATGTTACATTTCTCCTTCCAACAAACT +
Preference number: 6 (lower is better)
Translates to: LGCLCFTPSRDA*FTMLHFSFQQT
Trigger: AGTTTGTTGGAAGGAGAAATGTAACATAGTGAACCACGCATCTCTGGAGGGTGTAAAGCAGAGACAGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473782.1
ENST00000479064.5
CDS CCA 72 bp TATTATGAGCAGTGTCAGATTTATAAAGCCGAGGAGTaGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: YYEQCQIYKAEE*FGIYSWSQVQV
Trigger: GACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTTTATAAATCTGACACTGCTCATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS CAA 72 bp TCATTATCAAAGTGTTTCCCAGAAAGGCTACTTGAATaGACACCCATAGCCACAGTGGCTGAGGAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: SLSKCFPERLLE*TPIATVAEEAE
Trigger: TTCAGCCTCCTCAGCCACTGTGGCTATGGGTGTCAATTCAAGTAGCCTTTCTGGGAAACACTTTGATAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CAA 72 bp AAACGTTTTGAAGTTTCCAGTTCAAACATCAGTGCCTaGGCTCTTGGCTGTCTCTGCTTTACACCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: KRFEVSSSNISA*ALGCLCFTPSR
Trigger: TCTGGAGGGTGTAAAGCAGAGACAGCCAAGAGCCAAGGCACTGATGTTTGAACTGGAAACTTCAAAACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473782.1
ENST00000479064.5
CDS CCA 72 bp GATGCTGGCAGTGGCTATCCCTGTACAGTTCAAAGATaGGCAATTTTATTCTCAATGAGCATGCATGGCTTT +
Preference number: 6 (lower is better)
Translates to: DAGSGYPCTVQR*AILFSMSMHGF
Trigger: AAAGCCATGCATGCTCATTGAGAATAAAATTGCCCATCTTTGAACTGTACAGGGATAGCCACTGCCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CCA 72 bp ATTTATAAAGCCGAGGAGTGGTTTGGAATATACAGCTaGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAAT +
Preference number: 6 (lower is better)
Translates to: IYKAEEWFGIYS*SQVQVQCLDPN
Trigger: ATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTTTATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493455.6
CDS CAA 72 bp ACTTCATTTGTAGGCAGGTGGCCCACAGGCCATAATTaGCCACCTCCTACTTTAAGCATTCAAGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: TSFVGRWPTGHN*PPPTLSIQVLS
Trigger: AGACAAAACTTGAATGCTTAAAGTAGGAGGTGGCAAATTATGGCCTGTGGGCCACCTGCCTACAAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS CAA 72 bp GCGAGGGTGATTACTAAACACAGTACATGGATGAGGTaGGTGGGGGCAGATAATTCTAAATTCAAGACTCAG +
Preference number: 6 (lower is better)
Translates to: ARVITKHSTWMR*VGADNSKFKTQ
Trigger: CTGAGTCTTGAATTTAGAATTATCTGCCCCCACCAACCTCATCCATGTACTGTGTTTAGTAATCACCCTCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481910.1
CDS CAA 90 bp CCACAGGAAGCGAGGGTGATTACTAAACACAGTACATGGATGAGGTaGGTGGGGGCAGATAATTCTAAATTCAAGACTCAGAAACAACAT +
Preference number: 6 (lower is better)
Translates to: PQEARVITKHSTWMR*VGADNSKFKTQKQH
Trigger: ATGTTGTTTCTGAGTCTTGAATTTAGAATTATCTGCCCCCACCAACCTCATCCATGTACTGTGTTTAGTAATCACCCTCGCTTCCTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481910.1
CDS GCA 72 bp AAAATCTTATGCAGATCACTGGTGTTTTTCAGAATTTaGTCGATGAAGGTGTCCCACTCCGTGCTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: KILCRSLVFFRI*SMKVSHSVLSS
Trigger: AGAACTGAGCACGGAGTGGGACACCTTCATCGAGCAAATTCTGAAAAACACCAGTGATCTGCATAAGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000422379.2
ENST00000429411.5
ENST00000439453.5
ENST00000459918.1
ENST00000464362.5
ENST00000466781.5
ENST00000485842.5
ENST00000496385.5
CDS CAA 72 bp GGCTCCACTTTAGTTTGGTCCAAGTTCCAGAGGGAATaGAAAATCTTATGCAGATCACTGGTGTTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: GSTLVWSKFQRE*KILCRSLVFFR
Trigger: TCTGAAAAACACCAGTGATCTGCATAAGATTTTCAATTCCCTCTGGAACTTGGACCAAACTAAAGTGGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000422379.2
ENST00000466781.5
ENST00000485842.5
ENST00000496385.5
CDS TCA 72 bp TGCCTGTTCACTAATACATGTAAAAAGACAGCCTCATaGTACGCTGGAAACCACAGCTTCATACACAAAACA +
Preference number: 6 (lower is better)
Translates to: CLFTNTCKKTAS*YAGNHSFIHKT
Trigger: TGTTTTGTGTATGAAGCTGTGGTTTCCAGCGTATCATGAGGCTGTCTTTTTACATGTATTAGTGAACAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466781.5
CDS GCA 72 bp GTTTGGTCCAAGTTCCAGAGGGAATTGAAAATCTTATaGAGATCACTGGTGTTTTTCAGAATTTGCTCGATG +
Preference number: 6 (lower is better)
Translates to: VWSKFQRELKIL*RSLVFFRICSM
Trigger: CATCGAGCAAATTCTGAAAAACACCAGTGATCTGCATAAGATTTTCAATTCCCTCTGGAACTTGGACCAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000336873.9
ENST00000398145.7
ENST00000402105.7
ENST00000422379.2
ENST00000429411.5
ENST00000439453.5
ENST00000459918.1
ENST00000464362.5
ENST00000466781.5
ENST00000485842.5
ENST00000496385.5
CDS GCA 72 bp ACTATGTTACATTTCTCCTTCCAACAAACTAAAATCTaGGTTCCAGATTTTACATCTGCCTCCCACTCGCTA +
Preference number: 6 (lower is better)
Translates to: TMLHFSFQQTKI*VPDFTSASHSL
Trigger: TAGCGAGTGGGAGGCAGATGTAAAATCTGGAACGCAGATTTTAGTTTGTTGGAAGGAGAAATGTAACATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473782.1
ENST00000479064.5
CDS CAA 90 bp TTACAACACAGAGTAAACAGAATTTCCACAAGTTGGCCTAAGTCTTaGAAAGGAAAGGAGAAACCAGCTGTGTGCAATGCAGAATATGTT +
Preference number: 6 (lower is better)
Translates to: LQHRVNRISTSWPKS*KGKEKPAVCNAEYV
Trigger: AACATATTCTGCATTGCACACAGCTGGTTTCTCCTTTCCTTTCAAAGACTTAGGCCAACTTGTGGAAATTCTGTTTACTCTGTGTTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481910.1
CDS CAA 72 bp AGAAGTCCTTTAGTTTGGTCCAAGTTCCAGAGGGAATaGAAAATCTTATGCAGATCACTGGTGTTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: RSPLVWSKFQRE*KILCRSLVFFR
Trigger: TCTGAAAAACACCAGTGATCTGCATAAGATTTTCAATTCCCTCTGGAACTTGGACCAAACTAAAGGACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464362.5
CDS CAA 72 bp TTCCATGATTTAGTTTGGTCCAAGTTCCAGAGGGAATaGAAAATCTTATGCAGATCACTGGTGTTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: FHDLVWSKFQRE*KILCRSLVFFR
Trigger: TCTGAAAAACACCAGTGATCTGCATAAGATTTTCAATTCCCTCTGGAACTTGGACCAAACTAAATCATGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459918.1
CDS CAA 72 bp TTTATTTGTCTGTACATAAATGTTCAAACACTAGACTaGGAGATAGTGGAAGAGTTGGCCCTGTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: FICLYINVQTLD*EIVEELALCLC
Trigger: ACAAAGACACAGGGCCAACTCTTCCACTATCTCCAAGTCTAGTGTTTGAACATTTATGTACAGACAAATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493455.6