RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HPS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107521

Ensembl transcript IDs: ENST00000325103.10, ENST00000338546.9, ENST00000359632.7, ENST00000361490.9, ENST00000414009.1, ENST00000462743.1, ENST00000465957.1, ENST00000467246.5, ENST00000470095.5, ENST00000474873.5, ENST00000478087.5, ENST00000480020.5, ENST00000497527.1, ENST00000498219.5

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCATGCACAGCACACGGCCATCTGATCCTGTGCTGCAGTGGACGCTaGCTTTCGCCACGCCGTCCTCTCTGGCCCAGCACCGGCCTCCTG +
Preference number: 1 (lower is better)
Translates to: ACTAHGHLILCCSGR*LSPRRPLWPSTGLL
Trigger: CAGGAGGCCGGTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGGATCAGATGGCCGTGTGCTGTGCATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR GCA 90 bp CCTGGGGCCACCCTGGGCACTCTGCCCTATCCTCAGGATGGCCACTaGAGACAGGAGGCTCTCGTCATGGGGAACAGTGGCAAGCAAGGG +
Preference number: 1 (lower is better)
Translates to: PGATLGTLPYPQDGH*RQEALVMGNSGKQG
Trigger: CCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGCAGTGGCCATCCTGAGGATAGGGCAGAGTGCCCAGGGTGGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 90 bp ACATCAAAGGCTGGGCTCCACGGCCGCCAAGGGAATCCAAATCTCTaGGCCAGGGCCAGGGGCTTGAGAACCCCAGCCCTAGGGCAGACG +
Preference number: 1 (lower is better)
Translates to: TSKAGLHGRQGNPNL*ARARGLRTPALGQT
Trigger: CGTCTGCCCTAGGGCTGGGGTTCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGCCCAGCCTTTGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR GCA 90 bp GGCTGGAGCTGGCAGGGAAGATGGGGAGCCGCAGACAGCGTCCTGTaGTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACG +
Preference number: 1 (lower is better)
Translates to: GWSWQGRWGAADSVL*SRNTGTCTQALGGT
Trigger: CGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGACGCTGTCTGCGGCTCCCCATCTTCCCTGCCAGCTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
3UTR GCA 90 bp TGGGGAGCCGCAGACAGCGTCCTGTGCTCTAGGAACACGGGTACCTaGACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGA +
Preference number: 1 (lower is better)
Translates to: WGAADSVLCSRNTGT*TQALGGTGVHWSLR
Trigger: TCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGACGCTGTCTGCGGCTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
3UTR TCA 90 bp AAGACACAGAAGGCGAGGCTCCTGCATGCACAGCACACGGCCATCTaGTCCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTC +
Preference number: 1 (lower is better)
Translates to: KTQKARLLHAQHTAI*SCAAVDADFRHAVL
Trigger: GAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGGATCAGATGGCCGTGTGCTGTGCATGCAGGAGCCTCGCCTTCTGTGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 90 bp TCCCAGTCCCAGGGCTCTCAGGGTCTCTTGTCCCTGGGTCCATTCTaGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCG +
Preference number: 1 (lower is better)
Translates to: SQSQGSQGLLSLGPF*DRNFSVGREGLYPS
Trigger: CGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCTGAGAGCCCTGGGACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 90 bp TGCCCTATCCTCAGGATGGCCACTGCAGACAGGAGGCTCTCGTCATaGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAA +
Preference number: 1 (lower is better)
Translates to: CPILRMATADRRLSS*GTVASKGGWRTGCK
Trigger: TTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGCAGTGGCCATCCTGAGGATAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTaGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAG +
Preference number: 1 (lower is better)
Translates to: GSLVPGSILGQELLG*KRGAVPLGWWFSIQ
Trigger: CTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 90 bp ACATTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTaGGACGGAGGTGCCATCGCTTTAAACGTGGGGAATAGAAGAAAC +
Preference number: 1 (lower is better)
Translates to: TFIEHLPHWVILTPP*DGGAIALNVGNRRN
Trigger: GTTTCTTCTATTCCCCACGTTTAAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR TCA 90 bp CCATTCCATCAGATGATGTTAAGGAGGAACACAGATCCAGTCACCTaGGGGGATACTTCCTCACTGCCACCTTCTCAGGGTTTAGACCAA +
Preference number: 1 (lower is better)
Translates to: PFHQMMLRRNTDPVT*GDTSSLPPSQGLDQ
Trigger: TTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCCTCCTTAACATCATCTGATGGAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 90 bp CAAAGCTGTTCCCTGCAAGGAAGAGATCAGTCTTTGAGCAAATTTTaGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCATGCACA +
Preference number: 1 (lower is better)
Translates to: QSCSLQGRDQSLSKF*LKTKDTEGEAPACT
Trigger: TGTGCATGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGACTGATCTCTTCCTTGCAGGGAACAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACAGGAGGCTCTCGTCATaGGGAACAGTGGCAAGCAAG +
Preference number: 2 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHRRLSS*GTVASK
Trigger: CTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCT...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGCCCTGGGGCCACCCTaGGCACTCTGCCCTATCCTC +
Preference number: 2 (lower is better)
Translates to: GSLVPGSILGQELLGWKRALGPP*ALCPIL
Trigger: GAGGATAGGGCAGAGTGCCCAGGGTGGCCCCAGGGC...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCCTCAGGATGGCCACTaGAGACAGGAGGCTCTCGTC +
Preference number: 2 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSPQDGH*RQEALV
Trigger: GACGAGAGCCTCCTGTCTGCAGTGGCCATCCTGAGG...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTCCACCCTGGGCACTCTaGCCTATCCTCAGGATGGCC +
Preference number: 2 (lower is better)
Translates to: LVPGSILGQELLGWKRGAPPWAL*PILRMA
Trigger: GGCCATCCTGAGGATAGGGCAGAGTGCCCAGGGTGG...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTCCACCCTGGGCACTCTaGCCTATCCTCAGGATGGCC +
Preference number: 2 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPPPWAL*PILRMA
Trigger: GGCCATCCTGAGGATAGGGCAGAGTGCCCAGGGTGG...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp GTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGCTAAGACAGATGTCCTaGGCTGCCTGTCGCTCGCAG +
Preference number: 2 (lower is better)
Translates to: VLCSRNTGTCTQALGGTGLRQMS*AACRSQ
Trigger: CTGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAG...CCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
3UTR-3UTR CCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTGCCCTATCCTCAGGATaGCCACTGCAGACAGGAGGC +
Preference number: 2 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSALSSG*PLQTGG
Trigger: GCCTCCTGTCTGCAGTGGCCATCCTGAGGATAGGGC...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTAGAGAGCTTGCTGGGTaGGCTTCCTCCACGCAGGGA +
Preference number: 2 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSRELAG*ASSTQG
Trigger: TCCCTGCGTGGAGGAAGCCCACCCAGCAAGCTCTCT...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR TCA 90 bp CCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCGCCTTGCTCAGTACCTaGCATGGAGGGTGGTCTAGG +
Preference number: 2 (lower is better)
Translates to: PGSILGQELLGWKRGAVPALLST*HGGWSR
Trigger: CCTAGACCACCCTCCATGTCAGGTACTGAGCAAGGC...GGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACGGAATAGAAGAAACTTaGCAGGAGGTGCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHGIEET*QEVQRG
Trigger: TCCTCTCTGCACCTCCTGGCAAGTTTCTTCTATTCC...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTGGAGGGTGGTCTAGGTaGGGTTTTAGAAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFGGWSR*GFRSPG
Trigger: CCCAGGGCTTCTAAAACCCCACCTAGACCACCCTCC...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CAA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTaGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCA +
Preference number: 2 (lower is better)
Translates to: RVSCPWVHSGTGTSR*EERGCTPRVVVLNP
Trigger: TGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACGGAATAGAAGAAACTTaGCAGGAGGTGCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHGIEET*QEVQRG
Trigger: TCCTCTCTGCACCTCCTGGCAAGTTTCTTCTATTCC...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTAGGAGGCTCTCGTCATaGGGAACAGTGGCAAGCAAG +
Preference number: 2 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSRRLSS*GTVASK
Trigger: CTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCT...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTGGAGGGTGGTCTAGGTaGGGTTTTAGAAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPGGWSR*GFRSPG
Trigger: CCCAGGGCTTCTAAAACCCCACCTAGACCACCCTCC...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR TCA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCGCCTTGCTCAGTACCTaGCATGGAGGGTGGTCTAGG +
Preference number: 2 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGALLST*HGGWSR
Trigger: CCTAGACCACCCTCCATGTCAGGTACTGAGCAAGGC...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp AGCATGAAGGGGCTGGGACTTAGCAAGGGCTTATCAGCACTGACAGAAGGGTCTCCTCAGGATGGCCACTaGAGACAGGAGGCTCTCGTC +
Preference number: 2 (lower is better)
Translates to: SMKGLGLSKGLSALTEGSPQDGH*RQEALV
Trigger: GACGAGAGCCTCCTGTCTGCAGTGGCCATCCTGAGG...AGACCCTTCTGTCAGTGCTGATAAGCCCTTGCTAAGTCCCAGCCCCTTCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCCGTCATGGGGAACAGTaGCAAGCAAGGGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGRHGEQ*QARVAG
Trigger: TCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACG...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAAGGCAGAGGCAGCTCTaGAAGAGGAGCTGTTGCCAC +
Preference number: 2 (lower is better)
Translates to: GSLVPGSILGQELLGWKRRQRQL*KRSCCH
Trigger: GTGGCAACAGCTCCTCTTCCAGAGCTGCCTCTGCCT...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTGGAGCACCTTTTACCTaGGGTAGGAGAGAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSGAPFT*GRRELA
Trigger: AGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCC...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTGGTGCAGAGAGGAAGTaGCAGCGCTGGAATTCAAAC +
Preference number: 2 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFGAERK*QRWNSN
Trigger: GTTTGAATTCCAGCGCTGCCACTTCCTCTCTGCACC...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGAGAAGCACTAGCATGTTaGGCTTCAGTGATAACAATG +
Preference number: 2 (lower is better)
Translates to: LHGRQGNPNLWARARGLREALAC*ASVITM
Trigger: CATTGTTATCACTGAAGCCCAACATGCTAGTGCTTC...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTAGGAAGTGGCAGCGCTaGAATTCAAACCCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: LVPGSILGQELLGWKRGARKWQR*NSNPGK
Trigger: TTTGCCTGGGTTTGAATTCCAGCGCTGCCACTTCCT...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGGGTGCAGAGAGGAAGTaGCAGCGCTGGAATTCAAAC +
Preference number: 2 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEEGAERK*QRWNSN
Trigger: GTTTGAATTCCAGCGCTGCCACTTCCTCTCTGCACC...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGTCCCTGGGTCCATTCTaGGACAGGAACTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRSLGPF*DRNFSV
Trigger: AACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGA...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR TCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGAGGGCTTATCAGCACTaGCAGAAGGGTCTAGAAGCA +
Preference number: 2 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRRAYQH*QKGLEA
Trigger: TGCTTCTAGACCCTTCTGTCAGTGCTGATAAGCCCT...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR TCA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGGCACCACAGAAGCTTTaGAAGACATCAAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEEAPQKL*KTSKAG
Trigger: CCCAGCCTTTGATGTCTTTCAAAGCTTCTGTGGTGC...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGAAGTGGCAGCGCTaGAATTCAAACCCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEERKWQR*NSNPGK
Trigger: TTTGCCTGGGTTTGAATTCCAGCGCTGCCACTTCCT...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR TCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAATGACCAACATTTATTaGGCACCTACCACACTGGGT +
Preference number: 2 (lower is better)
Translates to: GSLVPGSILGQELLGWKRMTNIY*APTTLG
Trigger: ACCCAGTGTGGTAGGTGCTCAATAAATGTTGGTCAT...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACAGAAGGCGAGGCTCCTaGATGCACAGCACACGGCCA +
Preference number: 2 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHRRRGS*MHSTRP
Trigger: TGGCCGTGTGCTGTGCATGCAGGAGCCTCGCCTTCT...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTAGGGAACAGCAGAGATaGGGCTTCCTCCCCATCTCC +
Preference number: 2 (lower is better)
Translates to: IERSRGLVKLDISHPAAAREQQR*GFLPIS
Trigger: GGAGATGGGGAGGAAGCCCCATCTCTGCTGTTCCCT...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTCCAGAGAGAAGGATCTaGGGCCTTGCTCAGTACCTG +
Preference number: 2 (lower is better)
Translates to: IERSRGLVKLDISHPAAAPERRI*GLAQYL
Trigger: CAGGTACTGAGCAAGGCCCCAGATCCTTCTCTCTGG...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGAGAAGGCGAGGCTCCTaGATGCACAGCACACGGCCA +
Preference number: 2 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKERRRGS*MHSTRP
Trigger: TGGCCGTGTGCTGTGCATGCAGGAGCCTCGCCTTCT...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACGTCATGGGGAACAGTaGCAAGCAAGGGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEERHGEQ*QARVAG
Trigger: TCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACG...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGAGAGAGCTTGCTGGGTaGGCTTCCTCCACGCAGGGA +
Preference number: 2 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKERELAG*ASSTQG
Trigger: TCCCTGCGTGGAGGAAGCCCACCCAGCAAGCTCTCT...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGAAAGACATCAAAGGCTaGGCTCCACGGCCGCCAAGG +
Preference number: 2 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEKDIKG*APRPPR
Trigger: CCTTGGCGGCCGTGGAGCCCAGCCTTTGATGTCTTT...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGAAACTTGCCAGGAGGTaGAGAGAGGAAGTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEKLARR*REEVAA
Trigger: CGCTGCCACTTCCTCTCTGCACCTCCTGGCAAGTTT...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAAGGAGCACCTTTTACCTaGGGTAGGAGAGAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEEGAPFT*GRRELA
Trigger: AGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCC...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR GCA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACTGGAAGAGGAGCTGTTaGCACCGTTGTTTTACAAAC +
Preference number: 2 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHWKRSC*HRCFTN
Trigger: GTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCA...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR TCA 72 bp GCACACGGCCATCTGATCCTGTGCTGCAGTGGACGCTaGCTTTCGCCACGCCGTCCTCTCTGGCCCAGCACC +
Preference number: 3 (lower is better)
Translates to: AHGHLILCCSGR*LSPRRPLWPST
Trigger: GGTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGGATCAGATGGCCGTGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR GCA 72 bp GCAGACAGCGTCCTGTGCTCTAGGAACACGGGTACCTaGACTCAAGCCTTAGGAGGCACGGGGGTCCACTGG +
Preference number: 3 (lower is better)
Translates to: ADSVLCSRNTGT*TQALGGTGVHW
Trigger: CCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGACGCTGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
3UTR GCA 72 bp ACCCTGGGCACTCTGCCCTATCCTCAGGATGGCCACTaGAGACAGGAGGCTCTCGTCATGGGGAACAGTGGC +
Preference number: 3 (lower is better)
Translates to: TLGTLPYPQDGH*RQEALVMGNSG
Trigger: GCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGCAGTGGCCATCCTGAGGATAGGGCAGAGTGCCCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 72 bp ACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTaGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGC +
Preference number: 3 (lower is better)
Translates to: TCTQALGGTGVH*SLRQMSWAACR
Trigger: GCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
3UTR TCA 72 bp AAGGCGAGGCTCCTGCATGCACAGCACACGGCCATCTaGTCCTGTGCTGCAGTGGACGCTGACTTTCGCCAC +
Preference number: 3 (lower is better)
Translates to: KARLLHAQHTAI*SCAAVDADFRH
Trigger: GTGGCGAAAGTCAGCGTCCACTGCAGCACAGGATCAGATGGCCGTGTGCTGTGCATGCAGGAGCCTCGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 72 bp CTCAGGATGGCCACTGCAGACAGGAGGCTCTCGTCATaGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACA +
Preference number: 3 (lower is better)
Translates to: LRMATADRRLSS*GTVASKGGWRT
Trigger: TGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGCAGTGGCCATCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 72 bp GTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTaGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTC +
Preference number: 3 (lower is better)
Translates to: VPGSILGQELLG*KRGAVPLGWWF
Trigger: GAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 72 bp CAATCCTTGAGTTCAGGCTGGAGCTGGCAGGGAAGATaGGGAGCCGCAGACAGCGTCCTGTGCTCTAGGAAC +
Preference number: 3 (lower is better)
Translates to: QSLSSGWSWQGR*GAADSVLCSRN
Trigger: GTTCCTAGAGCACAGGACGCTGTCTGCGGCTCCCCATCTTCCCTGCCAGCTCCAGCCTGAACTCAAGGATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
3UTR CCA 72 bp CAGGGCTCTCAGGGTCTCTTGTCCCTGGGTCCATTCTaGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: QGSQGLLSLGPF*DRNFSVGREGL
Trigger: CAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCTGAGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CAA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTGAGCTGTTGCCACCGTaGTTTTACAAACAGGACCCC +
Preference number: 3 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFELLPP*FYKQDP
Trigger: GGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTC...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 72 bp GAGCACCTACCACACTGGGTAATCCTCACACCACCCTaGGACGGAGGTGCCATCGCTTTAAACGTGGGGAAT +
Preference number: 3 (lower is better)
Translates to: EHLPHWVILTPP*DGGAIALNVGN
Trigger: ATTCCCCACGTTTAAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CAA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACAGAAGCACTAGCATGTaGGGCTTCAGTGATAACAAT +
Preference number: 3 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHRSTSM*GFSDNN
Trigger: ATTGTTATCACTGAAGCCCAACATGCTAGTGCTTCT...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR GCA 72 bp CTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCATaGACAGCACACGGCCATCTGATCCTGTGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: LKTKDTEGEAPA*TAHGHLILCCS
Trigger: ACTGCAGCACAGGATCAGATGGCCGTGTGCTGTGCATGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR CCA 72 bp AACTTGCCAGGAGGTGCAGAGAGGAAGTGGCAGCGCTaGAATTCAAACCCAGGCAAAGGAGCACCTTTTACC +
Preference number: 3 (lower is better)
Translates to: NLPGGAERKWQR*NSNPGKGAPFT
Trigger: GGTAAAAGGTGCTCCTTTGCCTGGGTTTGAATTCCAGCGCTGCCACTTCCTCTCTGCACCTCCTGGCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CAA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGCGCACCACAGAAGCTTaGAAAGACATCAAAGGCTGG +
Preference number: 3 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEERTTEA*KDIKGW
Trigger: CCAGCCTTTGATGTCTTTCAAAGCTTCTGTGGTGCG...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CAA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGCTGGAAGAGGAGCTGTaGCCACCGTTGTTTTACAAA +
Preference number: 3 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEELEEEL*PPLFYK
Trigger: TTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAG...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CAA 90 bp TCTTTGAGCAAATTTTGGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCAGGCTCTCAGGGTCTCTaGTCCCTGGGTCCATTCTGG +
Preference number: 3 (lower is better)
Translates to: SLSKFWLKTKDTEGEAPAGSQGL*SLGPFW
Trigger: CCAGAATGGACCCAGGGACAAGAGACCCTGAGAGCC...TGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CAA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACACAGGAACTTCTCGGTaGGAAGAGAGGGGCTGTACC +
Preference number: 3 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHTGTSR*EERGCT
Trigger: GGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGT...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR TCA 72 bp TGTTGGGCTTCAGTGATAACAATGACCAACATTTATTaGGCACCTACCACACTGGGTAATCCTCACACCACC +
Preference number: 3 (lower is better)
Translates to: CWASVITMTNIY*APTTLGNPHTT
Trigger: GGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAATGTTGGTCATTGTTATCACTGAAGCCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR TCA 72 bp CCCAAAGCTGTTCCCTGCAAGGAAGAGATCAGTCTTTaGGCAAATTTTGGCTCAAGACTAAAGACACAGAAG +
Preference number: 3 (lower is better)
Translates to: PKAVPCKEEISL*ANFGSRLKTQK
Trigger: CTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGACTGATCTCTTCCTTGCAGGGAACAGCTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
3UTR-3UTR CAA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGCGCACCACAGAAGCTTaGAAAGACATCAAAGGCTGG +
Preference number: 3 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKERTTEA*KDIKGW
Trigger: CCAGCCTTTGATGTCTTTCAAAGCTTCTGTGGTGCG...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGTCTCCCACGAGGGGCTaGGAGCGCAGGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLESPTRG*ERREAP
Trigger: CGGGGCCTCCCTGCGCTCCCAGCCCCTCGTGGGAGA...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTCGGGGATGTTCTGGCTaGTCCGGGCCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPRGCSG*SGPSAG
Trigger: CCCCGCGGAGGGCCCGGAGCAGCCAGAACATCCCCG...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR GCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACGCCAGCTGGCCGGCCTaGTGCACCAGCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHASWPA*CTSRSV
Trigger: CACTGACCTGCTGGTGCAGCAGGCCGGCCAGCTGGC...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGATGGTCCTGCAGGTGCTaGGGCAGGTGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LHGRQGNPNLWARARGLRWSCRC*GRCGPP
Trigger: GGGAGGCCCACACCTGCCCCAGCACCTGCAGGACCA...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACGCCCTGGGGCCACCCTaGGCACTCTGCCCTATCCTC +
Preference number: 4 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHALGPP*ALCPIL
Trigger: GAGGATAGGGCAGAGTGCCCAGGGTGGCCCCAGGGC...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGACCTGAACCAGGAGGATaGGGGCAAGCAGGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: LHGRQGNPNLWARARGLRPEPGG*GQAGRP
Trigger: CGGCCGACCTGCTTGCCCTCATCCTCCTGGTTCAGG...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGCTCGCACCTGAACCAGGAGGATaGGGGCAAGCAGGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: HGGPLEPKTDVLGCLSLAPEPGG*GQAGRP
Trigger: CGGCCGACCTGCTTGCCCTCATCCTCCTGGTTCAGG...TGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACTCAGGAGCACCAGGTTaGTGCCCTGCCACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHSGAPG*CPATGA
Trigger: TGCCCCTGTGGCAGGGCATCAACCTGGTGCTCCTGA...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCGGGGATGTTCTGGCTaGTCCGGGCCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSRGCSG*SGPSAG
Trigger: CCCCGCGGAGGGCCCGGAGCAGCCAGAACATCCCCG...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTTGCACGGGGATGTTCTaGCTGCTCCGGGCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPCTGMF*LLRALR
Trigger: GCGGAGGGCCCGGAGCAGCCAGAACATCCCCGTGCA...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR CCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGGGGCCAGGGGCGCGCTaGGGCTCCTGGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRGPGAR*GSWSGA
Trigger: TGCTCCTGACCAGGAGCCCCAGCGCGCCCCTGGCCC...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp AGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCCTGAACCAGGAGGATaGGGGCAAGCAGGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: SLRRHGGPLEPKTDVLGCPEPGG*GQAGRP
Trigger: CGGCCGACCTGCTTGCCCTCATCCTCCTGGTTCAGG...GCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACGGGAAGGAGCTGGTGTaGAGTACTCCTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHGKELV*STPQGG
Trigger: CCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCC...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp AGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCCTCCGGTCCTCACCTaGGCTCTGATCGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLRRHGGPLEPKTDVLGCPPVLT*ALIARG
Trigger: TCCCCTGGCGATCAGAGCTCAGGTGAGGACCGGAGG...GCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGTCCAGCCAGGTGCTCTaGATCTCCTGTGCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLESSQVL*ISCAPR
Trigger: TCGAGGGGCACAGGAGATTCAGAGCACCTGGCTGGA...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp AGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCGGGCTCCAGGCCTGCTaGACGGGGATGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLRRHGGPLEPKTDVLGCGLQAC*TGMFWL
Trigger: CAGCCAGAACATCCCCGTGCAGCAGGCCTGGAGCCC...GCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR GCA 90 bp GCAGACAGGAGGCTCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGGGGCTCCAGGCCTGCTaGACGGGGATGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ADRRLSSWGTVASKGGWRGLQAC*TGMFWL
Trigger: CAGCCAGAACATCCCCGTGCAGCAGGCCTGGAGCCC...CCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGAACTTGGTCCTGCAGGTaGTGGGGCAGGTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LHGRQGNPNLWARARGLRTWSCR*WGRCGP
Trigger: AGGCCCACACCTGCCCCAGCACCTGCAGGACCAAGT...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACCCCTGCTGGGGGCTGTaGTCAGAAAGTTCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHPCWGL*SESSAG
Trigger: ACCGGCTGAACTTTCTGACCACAGCCCCCAGCAGGG...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGAGTGGGCCTCCCCTGCTaGGGGCTGTGGTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: LHGRQGNPNLWARARGLRVGLPC*GLWSES
Trigger: ACTTTCTGACCACAGCCCCCAGCAGGGGAGGCCCAC...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGAGACTGCGGCCACCTTaGCCTAGAGCAGGGGGATAC +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLERLRPP*PRAGGY
Trigger: GTATCCCCCTGCTCTAGGCCAAGGTGGCCGCAGTCT...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACGCAGCACAGCATCCCTaGTCCTCACTTCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHAAQHP*SSLPGG
Trigger: CCCTCCCGGAAGTGAGGACCAGGGATGCTGTGCTGC...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361490.9
CDS-3UTR TCA 90 bp TCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGTTGGGCCCGTGGAGTaGGGGCTCCAGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRHGEQWQARVAGGQDAKVGPVE*GLQACC
Trigger: GCAGCAGGCCTGGAGCCCTCACTCCACGGGCCCAAC...CTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGACCAGATGGTGCTACCTaGGCTCTGATCGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LHGRQGNPNLWARARGLRPDGAT*ALIARG
Trigger: TCCCCTGGCGATCAGAGCTCAGGTAGCACCATCTGG...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGATCCAGCCAGGTGCTCTaGATCTCCTGTGCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: LHGRQGNPNLWARARGLRSSQVL*ISCAPR
Trigger: TCGAGGGGCACAGGAGATTCAGAGCACCTGGCTGGA...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACCAGCACACGGCCATCTaGTCCTGTGCTGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHQHTAI*SCAAVD
Trigger: GTCCACTGCAGCACAGGATCAGATGGCCGTGTGCTG...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGCGGTTGGGCGGTTCTTaGTGTAGTAGCGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLERLGGS*CSSAGA
Trigger: AGCTCCTGCGCTACTACAGCAAGAACCGCCCAACCG...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACGATGCAAAGGCAGACTaGGGCCACCTTGGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHDAKAD*GHLGLE
Trigger: CTCTAGGCCAAGGTGGCCGCAGTCTGCCTTTGCATC...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GCAGACAGGAGGCTCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGGGCGAGGCTCCTGCATaGACAGCACACGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: ADRRLSSWGTVASKGGWRGEAPA*TAHGHL
Trigger: CAGATGGCCGTGTGCTGTGCATGCAGGAGCCTCGCC...CCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGCTCGCACCTCTGCGCCCTCAGTaGCCACCAAGACGCACTTCA +
Preference number: 4 (lower is better)
Translates to: HGGPLEPKTDVLGCLSLAPLRPQ*PPRRTS
Trigger: TGAAGTGCGTCTTGGTGGCCACTGAGGGCGCAGAGG...TGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR CCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGCTGCTGTGCTCTCGCTaGGGTAGAGGTCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLELLCSR*GRGPEP
Trigger: TGGTTCAGGACCTCTACCCCAGCGAGAGCACAGCAG...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAGCTGGCAGGGAAGATaGGGAGCCGCAGACAGCGTC +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPSWQGR*GAADSV
Trigger: GACGCTGTCTGCGGCTCCCCATCTTCCCTGCCAGCT...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGGGGCCAGGGGCGCGCTaGGGCTCCTGGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRGPGAR*GSWSGA
Trigger: TGCTCCTGACCAGGAGCCCCAGCGCGCCCCTGGCCC...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCTTGCTCAGTACCTGACATGGAGGGTGGTCTAGGTGGGGTTTTAGAAGCCCTGTCTCCCACGAGGGGCTaGGAGCGCAGGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PCSVPDMEGGLGGVLEALSPTRG*ERREAP
Trigger: CGGGGCCTCCCTGCGCTCCCAGCCCCTCGTGGGAGA...CAGGGCTTCTAAAACCCCACCTAGACCACCCTCCATGTCAGGTACTGAGCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGAATGAGCCTCTGCACTTaGTCCTGCAGGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LHGRQGNPNLWARARGLRMSLCT*SCRCWG
Trigger: GCCCCAGCACCTGCAGGACCAAGTGCAGAGGCTCAT...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACAGGGGTCCTGAACAGTaGTGGGCTCAGGGGATTGGA +
Preference number: 4 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHRGPEQ*WAQGIG
Trigger: TCCAATCCCCTGAGCCCACCACTGTTCAGGACCCCT...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTGGGAAGGAGCTGGTGTaGAGTACTCCTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPGKELV*STPQGG
Trigger: CCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCC...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTTCCTCACCTGAGCTCTaGTCGCCAGGGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPSSPEL*SPGEGA
Trigger: AGCTCCTTCCCCTGGCGATCAGAGCTCAGGTGAGGA...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp TGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCCCTCCGGTCCTCACCTaGGCTCTGATCGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: CTQALGGTGVHWSLRQMSPPVLT*ALIARG
Trigger: TCCCCTGGCGATCAGAGCTCAGGTGAGGACCGGAGG...GGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGTCCGACGAGGTCTTTTaGCTGCAGTTGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLESDEVF*LQLREG
Trigger: GCCTTCCCTCAACTGCAGTCAAAAGACCTCGTCGGA...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp AGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCACAGCCTGGATGACGTaGCGCTCCAGCGCCTCTATG +
Preference number: 4 (lower is better)
Translates to: SLRRHGGPLEPKTDVLGCTAWMT*RSSASM
Trigger: CATAGAGGCGCTGGAGCGGCACGTCATCCAGGCTGT...GCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTGCCAGCAGCTTGGAGTaGACGAGCAGGAAGGCATGC +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPASSLE*TSRKAC
Trigger: GCATGCCTTCCTGCTCGTGCACTCCAAGCTGCTGGC...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp CACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGCTCGCATGTCGTCCTCTGCTGTaGTCTCGCTGGGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: HGGPLEPKTDVLGCLSLACRPLL*SRWGRG
Trigger: ACCTCTACCCCAGCGAGAGCACAGCAGAGGACGACA...TGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp CACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGCTCGCAGCAGACAGCGTCCTGTaGTCTAGGAACACGGGTACC +
Preference number: 4 (lower is better)
Translates to: HGGPLEPKTDVLGCLSLAADSVL*SRNTGT
Trigger: GGTACCCGTGTTCCTAGAGCACAGGACGCTGTCTGC...TGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACCCTCCAGCCAGATGGTaGTACCTGAGCTCTGATCGC +
Preference number: 4 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHPPARW*YLSSDR
Trigger: GCGATCAGAGCTCAGGTAGCACCATCTGGCTGGAGG...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGCAGCCAGCGGCCCCTTaGCCAACTCCGACGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRQPAAP*PTPTRS
Trigger: AGACCTCGTCGGAGTTGGGCAAGGGGCCGCTGGCTG...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACCGGTTGGGCGGTTCTTaGTGTAGTAGCGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHRLGGS*CSSAGA
Trigger: AGCTCCTGCGCTACTACAGCAAGAACCGCCCAACCG...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTGCCAGCTGGCCGGCCTaGTGCACCAGCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPASWPA*CTSRSV
Trigger: CACTGACCTGCTGGTGCAGCAGGCCGGCCAGCTGGC...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACAAACTTGCCAGGAGGTaGAGAGAGGAAGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHKLARR*REEVAA
Trigger: CGCTGCCACTTCCTCTCTGCACCTCCTGGCAAGTTT...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTGGTGTTGACAGCCTaGATGACGTGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLRRHGGPLEPKTDVLGCLVLTA*MTCRSS
Trigger: GCTGGAGCGGCACGTCATCCAGGCTGTCAACACCAG...GCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp CACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGCTCGCACTGCTGTGCTCTCGCTaGGGTAGAGGTCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: HGGPLEPKTDVLGCLSLALLCSR*GRGPEP
Trigger: TGGTTCAGGACCTCTACCCCAGCGAGAGCACAGCAG...TGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp AGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCGGCACGGGGGTCCACTaGAGCCTAAGACAGATGTCC +
Preference number: 4 (lower is better)
Translates to: SLRRHGGPLEPKTDVLGCGTGVH*SLRQMS
Trigger: GGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCC...GCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACCCTGGAACAGCAGCGTaGTGTAGCCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHPGTAA*CSPSAG
Trigger: ACCTGCAGAAGGGCTACACCACGCTGCTGTTCCAGG...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACAGGGAACAGCAGAGATaGGGCTTCCTCCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHREQQR*GFLPIS
Trigger: GGAGATGGGGAGGAAGCCCCATCTCTGCTGTTCCCT...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGAAAAGACATCAAAGGCTaGGCTCCACGGCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LHGRQGNPNLWARARGLRKDIKG*APRPPR
Trigger: CCTTGGCGGCCGTGGAGCCCAGCCTTTGATGTCTTT...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGATGCGGTCCACATAGATaGAGTGCACCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LHGRQGNPNLWARARGLRCGPHR*SAPSLG
Trigger: TCCCAGGCTTGGTGCACTTCATCTATGTGGACCGCA...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTCATGCCGATAGGCACTaGGTCGTCGGAGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFHADRH*VVGEDG
Trigger: CCCGTCCTCTCCGACGACTCAGTGCCTATCGGCATG...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTGCAGACAGCGTCCTGTaGTCTAGGAACACGGGTACC +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPADSVL*SRNTGT
Trigger: GGTACCCGTGTTCCTAGAGCACAGGACGCTGTCTGC...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGGTGTGGGCCTCCCCTaGTGGGGGCTGTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: LVPGSILGQELLGWKRGAGVGLP*WGLWSE
Trigger: TTCTGACCACAGCCCCCAGCAGGGGAGGCCCACACC...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGCTGGCCGGCCTGCTaGACCAGCAGGTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEESWPAC*TSRSVG
Trigger: CCCCACTGACCTGCTGGTGCAGCAGGCCGGCCAGCT...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACAAACTTGCCAGGAGGTaGAGAGAGGAAGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHKLARR*REEVAA
Trigger: CGCTGCCACTTCCTCTCTGCACCTCCTGGCAAGTTT...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTCTGCTGTGCTCTCGCTaGGGTAGAGGTCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPLLCSR*GRGPEP
Trigger: TGGTTCAGGACCTCTACCCCAGCGAGAGCACAGCAG...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGATGCACGGGGATGTTCTaGCTGCTCCGGGCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRCTGMF*LLRALR
Trigger: GCGGAGGGCCCGGAGCAGCCAGAACATCCCCGTGCA...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAGACAGGAGGCTCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGGCCAGGGGAAGGAGCTaGTGTGAAGTACTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ADRRLSSWGTVASKGGWRARGRS*CEVLLR
Trigger: CCTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGC...CCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTAAGACAGATGTCCTaGGCTGCCTGTCGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SLRRHGGPLEPKTDVLGCLRQMS*AACRSQ
Trigger: CTGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAG...GCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp TGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCAGCTGGCAGGGAAGATaGGGAGCCGCAGACAGCGTC +
Preference number: 4 (lower is better)
Translates to: CTQALGGTGVHWSLRQMSSWQGR*GAADSV
Trigger: GACGCTGTCTGCGGCTCCCCATCTTCCCTGCCAGCT...GGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp CACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGCTCGCATCCTTGAGTTCAGGCTaGAGCTGGCAGGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: HGGPLEPKTDVLGCLSLASLSSG*SWQGRW
Trigger: CCATCTTCCCTGCCAGCTCCAGCCTGAACTCAAGGA...TGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp GCAGACAGGAGGCTCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGCCCCCTCCAGCCAGATaGTGCTACCTGAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ADRRLSSWGTVASKGGWRPPPAR*CYLSSD
Trigger: ATCAGAGCTCAGGTAGCACCATCTGGCTGGAGGGGG...CCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGTGGGGAACCAGTGTTTaGAGGGTGTCCTCTGCTATC +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLEWGTSV*RVSSAI
Trigger: GATAGCAGAGGACACCCTCCAAACACTGGTTCCCCA...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGCCAGGAAGATCCTTCTaGGGCCGGAAGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRPGRSF*GRKAQG
Trigger: GCCCTGTGCCTTCCGGCCCCAGAAGGATCTTCCTGG...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCTTGCTCAGTACCTGACATGGAGGGTGGTCTAGGTGGGGTTTTAGAAGCCCTGTGGTCCTGCAGGTGCTaGGGCAGGTGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PCSVPDMEGGLGGVLEALWSCRC*GRCGPP
Trigger: GGGAGGCCCACACCTGCCCCAGCACCTGCAGGACCA...CAGGGCTTCTAAAACCCCACCTAGACCACCCTCCATGTCAGGTACTGAGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGTATCTGCGCGCCAGCTaGATCAGAGACCAGACCTTA +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLEYLRAS*IRDQTL
Trigger: TAAGGTCTGGTCTCTGATCCAGCTGGCGCGCAGATA...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAGACAGGAGGCTCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGAGGGAACAGCAGAGATaGGGCTTCCTCCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: ADRRLSSWGTVASKGGWRREQQR*GFLPIS
Trigger: GGAGATGGGGAGGAAGCCCCATCTCTGCTGTTCCCT...CCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGTCCCTGGGTCCATTCTaGGACAGGAACTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLESLGPF*DRNFSV
Trigger: AACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGA...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp TGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCGGGAAGGAGCTGGTGTaGAGTACTCCTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CTQALGGTGVHWSLRQMSGKELV*STPQGG
Trigger: CCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCC...GGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp GACAGCGTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCTCCTCACCTGAGCTCTaGTCGCCAGGGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DSVLCSRNTGTCTQALGGSSPEL*SPGEGA
Trigger: AGCTCCTTCCCCTGGCGATCAGAGCTCAGGTGAGGA...GCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTTGCTGCAGTGGACGCTaGCTTTCGCCACGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPCCSGR*LSPRRP
Trigger: AGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCA...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGCTCGCAAAGCTGTCTGTCTCCTaGATGTCGTCCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: HGGPLEPKTDVLGCLSLAKLSVS*MSSSAV
Trigger: CACAGCAGAGGACGACATTCAGGAGACAGACAGCTT...TGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414009.1
CDS-3UTR GCA 90 bp TGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCGCTCCAGCGCCTCTATaGACAGCTCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CTQALGGTGVHWSLRQMSAPAPL*TAHRAG
Trigger: CCCAGCTCTGTGAGCTGTGCATAGAGGCGCTGGAGC...GGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp GACAGCGTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCGCCAGCAGCTTGGAGTaGACGAGCAGGAAGGCATGC +
Preference number: 4 (lower is better)
Translates to: DSVLCSRNTGTCTQALGGASSLE*TSRKAC
Trigger: GCATGCCTTCCTGCTCGTGCACTCCAAGCTGCTGGC...GCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGACGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp TGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCACAGATGTCCTGGGCTaGCTGTCGCTCGCAGCTAGC +
Preference number: 4 (lower is better)
Translates to: CTQALGGTGVHWSLRQMSTDVLG*LSLAAS
Trigger: GCTAGCTGCGAGCGACAGGCAGCCCAGGACATCTGT...GGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp AGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCAGGAACACGGGTACCTaGACTCAAGCCTTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLRRHGGPLEPKTDVLGCRNTGT*TQALGG
Trigger: GCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCT...GCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGACCAGGTTGATGCCCTaGCACAGGGGCAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRTRLMP*HRGRQY
Trigger: GTACTGCCTGCCCCTGTGGCAGGGCATCAACCTGGT...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGAAGGCGCCACCATCTaGCCAGTGGTGCGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SRHGEQWQARVAGGQDAKEGATI*PVVRST
Trigger: TGTGGACCGCACCACTGGGCAGATGGTGGCGCCTTC...CTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTGAAGGCGCCACCATCTaGCCAGTGGTGCGGTCCACA +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPEGATI*PVVRST
Trigger: TGTGGACCGCACCACTGGGCAGATGGTGGCGCCTTC...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCAGAAGGCGAGGCTCCTaGATGCACAGCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: PGSILGQELLGWKRGAVPRRRGS*MHSTRP
Trigger: TGGCCGTGTGCTGTGCATGCAGGAGCCTCGCCTTCT...GGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTAGAAGGCGAGGCTCCTaGATGCACAGCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFRRRGS*MHSTRP
Trigger: TGGCCGTGTGCTGTGCATGCAGGAGCCTCGCCTTCT...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCCTCTGCGCCCTCAGTaGCCACCAAGACGCACTTCA +
Preference number: 4 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSPLRPQ*PPRRTS
Trigger: TGAAGTGCGTCTTGGTGGCCACTGAGGGCGCAGAGG...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGCCAGGGGAAGGAGCTaGTGTGAAGTACTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLCSRNTGTCTQALGGTGARGRS*CEVLLR
Trigger: CCTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGC...CCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTTCCTTGAGTTCAGGCTaGAGCTGGCAGGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPSLSSG*SWQGRW
Trigger: CCATCTTCCCTGCCAGCTCCAGCCTGAACTCAAGGA...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGATGAGCCTCTGCACTTaGTCCTGCAGGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRMSLCT*SCRCWG
Trigger: GCCCCAGCACCTGCAGGACCAAGTGCAGAGGCTCAT...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAGACAGGAGGCTCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGAGGAGGCTCTCGTCATaGGGAACAGTGGCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: ADRRLSSWGTVASKGGWRRRLSS*GTVASK
Trigger: CTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCT...CCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGCATGAAGGGGCTGGGACTTAGCAAGGGCTTATCAGCACTGACAGAAGGGTCTGCCCTGGGGCCACCCTaGGCACTCTGCCCTATCCTC +
Preference number: 4 (lower is better)
Translates to: SMKGLGLSKGLSALTEGSALGPP*ALCPIL
Trigger: GAGGATAGGGCAGAGTGCCCAGGGTGGCCCCAGGGC...AGACCCTTCTGTCAGTGCTGATAAGCCCTTGCTAAGTCCCAGCCCCTTCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGCTCGCACTTCAAACAGGTACTTaGGCACATACAGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: HGGPLEPKTDVLGCLSLALQTGT*AHTASA
Trigger: GGCGGAAGCTGTATGTGCTCAAGTACCTGTTTGAAG...TGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR TCA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTCCTGAACCAGGAGGATaGGGGCAAGCAGGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGPEPGG*GQAGRP
Trigger: CGGCCGACCTGCTTGCCCTCATCCTCCTGGTTCAGG...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GCTTTAGGGATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGGTTGGGCCCGTGGAGTaGGGGCTCCAGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALGISGVVLTILEFRLELVGPVE*GLQACC
Trigger: GCAGCAGGCCTGGAGCCCTCACTCCACGGGCCCAAC...CAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGATCCCTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR TCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTCCAGATGGTGCTACCTaGGCTCTGATCGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LVPGSILGQELLGWKRGAPDGAT*ALIARG
Trigger: TCCCCTGGCGATCAGAGCTCAGGTAGCACCATCTGG...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTGCCTTGCTCAGTACCTaGCATGGAGGGTGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSALLST*HGGWSR
Trigger: CCTAGACCACCCTCCATGTCAGGTACTGAGCAAGGC...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTGCCTTGCTCAGTACCTaGCATGGAGGGTGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFALLST*HGGWSR
Trigger: CCTAGACCACCCTCCATGTCAGGTACTGAGCAAGGC...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGATGCTGCAGTGGACGCTaGCTTTCGCCACGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRCCSGR*LSPRRP
Trigger: AGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCA...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTCAGCACACGGCCATCTaGTCCTGTGCTGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPQHTAI*SCAAVD
Trigger: GTCCACTGCAGCACAGGATCAGATGGCCGTGTGCTG...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGCAGCATCCCTGGTCCTaGAAATGCTCACTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: VLCSRNTGTCTQALGGTGQHPWS*KCSLPG
Trigger: TCCCGGAAGTGAGCATTTGCAGGACCAGGGATGCTG...CCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR GCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGGTAGAAGAGGACCTCTaGGCCCTCAGTGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRVEEDL*ALSGHQ
Trigger: TTGGTGGCCACTGAGGGCGCAGAGGTCCTCTTCTAC...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGGTCACCAGCCCAAAGTaGACTTCAAACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLEVTSPK*TSNRYL
Trigger: CAAGTACCTGTTTGAAGTGCACTTTGGGCTGGTGAC...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGCCAGCAGCTTGGAGTaGACGAGCAGGAAGGCATGC +
Preference number: 4 (lower is better)
Translates to: LVPGSILGQELLGWKRGAASSLE*TSRKAC
Trigger: GCATGCCTTCCTGCTCGTGCACTCCAAGCTGCTGGC...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTGTGGCTAGAGTAGAATaGCAGCAGCTTGGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPVARVE*QQLGVH
Trigger: GTGCACTCCAAGCTGCTGGCATTCTACTCTAGCCAC...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp GACAGCGTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCTGTCGTCCTCTGCTGTaGTCTCGCTGGGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: DSVLCSRNTGTCTQALGGCRPLL*SRWGRG
Trigger: ACCTCTACCCCAGCGAGAGCACAGCAGAGGACGACA...GCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGACGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp GTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGAGGAACACGGGTACCTaGACTCAAGCCTTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VLCSRNTGTCTQALGGTGRNTGT*TQALGG
Trigger: GCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCT...CCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTACCAGGTTGATGCCCTaGCACAGGGGCAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LVPGSILGQELLGWKRGATRLMP*HRGRQY
Trigger: GTACTGCCTGCCCCTGTGGCAGGGCATCAACCTGGT...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGACTTGGTCCTGCAGGTaGTGGGGCAGGTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEETWSCR*WGRCGP
Trigger: AGGCCCACACCTGCCCCAGCACCTGCAGGACCAAGT...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTGATGCAAAGGCAGACTaGGGCCACCTTGGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFDAKAD*GHLGLE
Trigger: CTCTAGGCCAAGGTGGCCGCAGTCTGCCTTTGCATC...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGCCACCCTGGGCACTCTaGCCTATCCTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEEPPWAL*PILRMA
Trigger: GGCCATCCTGAGGATAGGGCAGAGTGCCCAGGGTGG...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGTCTTGGCAAGCACAGTaGAGCATCCAGACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: VLCSRNTGTCTQALGGTGSWQAQ*SIQTAR
Trigger: TCTGGCCGTCTGGATGCTCCACTGTGCTTGCCAAGA...CCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR CCA 90 bp TGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCGCCAGGGGAAGGAGCTaGTGTGAAGTACTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CTQALGGTGVHWSLRQMSARGRS*CEVLLR
Trigger: CCTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGC...GGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp GACAGCGTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCCTAAGACAGATGTCCTaGGCTGCCTGTCGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: DSVLCSRNTGTCTQALGGLRQMS*AACRSQ
Trigger: CTGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAG...GCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGACGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTCCCTGCTGGGGGCTGTaGTCAGAAAGTTCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LVPGSILGQELLGWKRGAPCWGL*SESSAG
Trigger: ACCGGCTGAACTTTCTGACCACAGCCCCCAGCAGGG...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGGTGGGCCTCCCCTGCTaGGGGCTGTGGTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRVGLPC*GLWSES
Trigger: ACTTTCTGACCACAGCCCCCAGCAGGGGAGGCCCAC...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTCCTGGAACAGCAGCGTaGTGTAGCCCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFPGTAA*CSPSAG
Trigger: ACCTGCAGAAGGGCTACACCACGCTGCTGTTCCAGG...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTGCCCTATCCTCAGGATaGCCACTGCAGACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPALSSG*PLQTGG
Trigger: GCCTCCTGTCTGCAGTGGCCATCCTGAGGATAGGGC...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGGGAGGGTGGTCTAGGTaGGGTTTTAGAAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRGGWSR*GFRSPG
Trigger: CCCAGGGCTTCTAAAACCCCACCTAGACCACCCTCC...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTCCAGCACCGGCCTCCTaGCCTCAGAGGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGPAPAS*PQRSRH
Trigger: GTGTCTGCTCCTCTGAGGCCAGGAGGCCGGTGCTGG...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGGTGCTACCTGAGCTCTaGTCGCCAGGGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRVLPEL*SPGEGA
Trigger: AGCTCCTTCCCCTGGCGATCAGAGCTCAGGTAGCAC...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CCTTGCTCAGTACCTGACATGGAGGGTGGTCTAGGTGGGGTTTTAGAAGCCCTGGTGCTACCTGAGCTCTaGTCGCCAGGGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PCSVPDMEGGLGGVLEALVLPEL*SPGEGA
Trigger: AGCTCCTTCCCCTGGCGATCAGAGCTCAGGTAGCAC...CAGGGCTTCTAAAACCCCACCTAGACCACCCTCCATGTCAGGTACTGAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTTCAGGAGCACCAGGTTaGTGCCCTGCCACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGSGAPG*CPATGA
Trigger: TGCCCCTGTGGCAGGGCATCAACCTGGTGCTCCTGA...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGGCTCCAGCGCCTCTATaGACAGCTCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRAPAPL*TAHRAG
Trigger: CCCAGCTCTGTGAGCTGTGCATAGAGGCGCTGGAGC...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGCTCCAGCGCCTCTATaGACAGCTCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRAPAPL*TAHRAG
Trigger: CCCAGCTCTGTGAGCTGTGCATAGAGGCGCTGGAGC...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTTGTCGTCCTCTGCTGTaGTCTCGCTGGGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPCRPLL*SRWGRG
Trigger: ACCTCTACCCCAGCGAGAGCACAGCAGAGGACGACA...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGTGTCGTCCTCTGCTGTaGTCTCGCTGGGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SRHGEQWQARVAGGQDAKCRPLL*SRWGRG
Trigger: ACCTCTACCCCAGCGAGAGCACAGCAGAGGACGACA...CTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGCTATTGTTTCCTCCTaGTTTCCTCCGGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: VLCSRNTGTCTQALGGTGAIVSS*FPPVLT
Trigger: GGTGAGGACCGGAGGAAAGCAGGAGGAAACAATAGC...CCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCCTCTGCACTTGGTCCTaGAGGTGCTGGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGLCTWS*RCWGRC
Trigger: ACACCTGCCCCAGCACCTGCAGGACCAAGTGCAGAG...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CCTTGCTCAGTACCTGACATGGAGGGTGGTCTAGGTGGGGTTTTAGAAGCCCTGCCTCAGGATGGCCACTaGAGACAGGAGGCTCTCGTC +
Preference number: 4 (lower is better)
Translates to: PCSVPDMEGGLGGVLEALPQDGH*RQEALV
Trigger: GACGAGAGCCTCCTGTCTGCAGTGGCCATCCTGAGG...CAGGGCTTCTAAAACCCCACCTAGACCACCCTCCATGTCAGGTACTGAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGACCTCAGGATGGCCACTaGAGACAGGAGGCTCTCGTC +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRPQDGH*RQEALV
Trigger: GACGAGAGCCTCCTGTCTGCAGTGGCCATCCTGAGG...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGTGGAAGAGGAGCTGTTaGCACCGTTGTTTTACAAAC +
Preference number: 4 (lower is better)
Translates to: APRPPRESKSLGQGQGLEWKRSC*HRCFTN
Trigger: GTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCA...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTTCTTGGCAAGCACAGTaGAGCATCCAGACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSSWQAQ*SIQTAR
Trigger: TCTGGCCGTCTGGATGCTCCACTGTGCTTGCCAAGA...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGCTGGTGTTGACAGCCTaGATGACGTGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRLVLTA*MTCRSS
Trigger: GCTGGAGCGGCACGTCATCCAGGCTGTCAACACCAG...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGCCCCCTCCAGCCAGATaGTGCTACCTGAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SRHGEQWQARVAGGQDAKPPPAR*CYLSSD
Trigger: ATCAGAGCTCAGGTAGCACCATCTGGCTGGAGGGGG...CTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTGAAGGCACAGGGCAGTaGGGAACCAGTGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPEGTGQ*GTSVWR
Trigger: CCTCCAAACACTGGTTCCCCACTGCCCTGTGCCTTC...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTCCAGGAAGATCCTTCTaGGGCCGGAAGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGPGRSF*GRKAQG
Trigger: GCCCTGTGCCTTCCGGCCCCAGAAGGATCTTCCTGG...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTAGTTCAGCCGGTAGATaGCGCAGAGCTGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPSSAGR*RRAAAS
Trigger: TGAAGCGGCAGCTCTGCGCCATCTACCGGCTGAACT...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCAGACTGCGGCCACCTTaGCCTAGAGCAGGGGGATAC +
Preference number: 4 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGRLRPP*PRAGGY
Trigger: GTATCCCCCTGCTCTAGGCCAAGGTGGCCGCAGTCT...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTAGGAGGCTCTCGTCATaGGGAACAGTGGCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFRRLSS*GTVASK
Trigger: CTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCT...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGAGAGCTTGCTGGGTaGGCTTCCTCCACGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEERELAG*ASSTQG
Trigger: TCCCTGCGTGGAGGAAGCCCACCCAGCAAGCTCTCT...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp AGCATGAAGGGGCTGGGACTTAGCAAGGGCTTATCAGCACTGACAGAAGGGTCTGGGAAGGAGCTGGTGTaGAGTACTCCTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SMKGLGLSKGLSALTEGSGKELV*STPQGG
Trigger: CCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCC...AGACCCTTCTGTCAGTGCTGATAAGCCCTTGCTAAGTCCCAGCCCCTTCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGGGTAGGACACCATGGTaGTGTTCCTCCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRGRTPW*CSSCSS
Trigger: TGAAGAGCAGGAGGAACATCACCATGGTGTCCTACC...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTACAGATCCAGTCACCTaGGGGGATACTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFTDPVT*GDTSSL
Trigger: CAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGT...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp AGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTGCGTCACCAGCCCAAAGTaGACTTCAAACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: SLRRHGGPLEPKTDVLGCVTSPK*TSNRYL
Trigger: CAAGTACCTGTTTGAAGTGCACTTTGGGCTGGTGAC...GCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR GCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCACAGCCTGGATGACGTaGCGCTCCAGCGCCTCTATG +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPTAWMT*RSSASM
Trigger: CATAGAGGCGCTGGAGCGGCACGTCATCCAGGCTGT...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp AGCATGAAGGGGCTGGGACTTAGCAAGGGCTTATCAGCACTGACAGAAGGGTCTACAGCCTGGATGACGTaGCGCTCCAGCGCCTCTATG +
Preference number: 4 (lower is better)
Translates to: SMKGLGLSKGLSALTEGSTAWMT*RSSASM
Trigger: CATAGAGGCGCTGGAGCGGCACGTCATCCAGGCTGT...AGACCCTTCTGTCAGTGCTGATAAGCCCTTGCTAAGTCCCAGCCCCTTCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GACAGCGTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCGTGGCTAGAGTAGAATaGCAGCAGCTTGGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: DSVLCSRNTGTCTQALGGVARVE*QQLGVH
Trigger: GTGCACTCCAAGCTGCTGGCATTCTACTCTAGCCAC...GCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGACGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTCGGGGATGTTCTGGCTaGTCCGGGCCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: IERSRGLVKLDISHPAAARGCSG*SGPSAG
Trigger: CCCCGCGGAGGGCCCGGAGCAGCCAGAACATCCCCG...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCGCTATTGTTTCCTCCTaGTTTCCTCCGGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: CTQALGGTGVHWSLRQMSAIVSS*FPPVLT
Trigger: GGTGAGGACCGGAGGAAAGCAGGAGGAAACAATAGC...GGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCCCTCCAGCCAGATGGTaGTACCTGAGCTCTGATCGC +
Preference number: 4 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGPPARW*YLSSDR
Trigger: GCGATCAGAGCTCAGGTAGCACCATCTGGCTGGAGG...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGACCTTCTGCAGGTATCTaGGCGCCAGCTGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRPSAGI*APAGSE
Trigger: CTCTGATCCAGCTGGCGCGCAGATACCTGCAGAAGG...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGCATGAAGGGGCTGGGACTTAGCAAGGGCTTATCAGCACTGACAGAAGGGTCTCTGGTGTTGACAGCCTaGATGACGTGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SMKGLGLSKGLSALTEGSLVLTA*MTCRSS
Trigger: GCTGGAGCGGCACGTCATCCAGGCTGTCAACACCAG...AGACCCTTCTGTCAGTGCTGATAAGCCCTTGCTAAGTCCCAGCCCCTTCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTAGAATGCCAGCAGCTTaGAGTGCACGAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPRMPAA*SARAGR
Trigger: CCTTCCTGCTCGTGCACTCCAAGCTGCTGGCATTCT...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAGACAGGAGGCTCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGAGCTTTCCTTCACGTTaGCATCCAGGAAGATCCTTC +
Preference number: 4 (lower is better)
Translates to: ADRRLSSWGTVASKGGWRSFPSR*HPGRSF
Trigger: GAAGGATCTTCCTGGATGCCAACGTGAAGGAAAGCT...CCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAAACTTGTCCATCCTCTaGCGCAGGTCTCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRNLSIL*RRSPTR
Trigger: CCTCGTGGGAGACCTGCGCCAGAGGATGGACAAGTT...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAAGTTCAGCCGGTAGATaGCGCAGAGCTGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRSSAGR*RRAAAS
Trigger: TGAAGCGGCAGCTCTGCGCCATCTACCGGCTGAACT...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGACGTCATGGGGAACAGTaGCAAGCAAGGGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRRHGEQ*QARVAG
Trigger: TCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACG...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCAGGCAGAGGCAGCTCTaGAAGAGGAGCTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGRQRQL*KRSCCH
Trigger: GTGGCAACAGCTCCTCTTCCAGAGCTGCCTCTGCCT...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGCATGAAGGGGCTGGGACTTAGCAAGGGCTTATCAGCACTGACAGAAGGGTCTATCCTCACACCACCCTaGGACGGAGGTGCCATCGCT +
Preference number: 4 (lower is better)
Translates to: SMKGLGLSKGLSALTEGSILTPP*DGGAIA
Trigger: AGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGAT...AGACCCTTCTGTCAGTGCTGATAAGCCCTTGCTAAGTCCCAGCCCCTTCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTCAGGAACTTCTCGGTTaGAAGAGAGGGGCTGTACCC +
Preference number: 4 (lower is better)
Translates to: LVPGSILGQELLGWKRGAQELLG*KRGAVP
Trigger: GGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTG...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCTGCGGTCCACATAGATaGAGTGCACCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGCGPHR*SAPSLG
Trigger: TCCCAGGCTTGGTGCACTTCATCTATGTGGACCGCA...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTTCTTTTGACTGCAGTTaGGGGAAGGCGCCACCATCT +
Preference number: 4 (lower is better)
Translates to: LVPGSILGQELLGWKRGASFDCS*GKAPPS
Trigger: AGATGGTGGCGCCTTCCCTCAACTGCAGTCAAAAGA...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGTCCGACGAGGTCTTTTaGCTGCAGTTGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRSDEVF*LQLREG
Trigger: GCCTTCCCTCAACTGCAGTCAAAAGACCTCGTCGGA...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTAGGGCTTATCAGCACTaGCAGAAGGGTCTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFRAYQH*QKGLEA
Trigger: TGCTTCTAGACCCTTCTGTCAGTGCTGATAAGCCCT...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGAGGGCTTATCAGCACTaGCAGAAGGGTCTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRRAYQH*QKGLEA
Trigger: TGCTTCTAGACCCTTCTGTCAGTGCTGATAAGCCCT...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTGCACCACAGAAGCTTTaGAAGACATCAAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFAPQKL*KTSKAG
Trigger: CCCAGCCTTTGATGTCTTTCAAAGCTTCTGTGGTGC...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCGTAGAAGAGGACCTCTaGGCCCTCAGTGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPVEEDL*ALSGHQ
Trigger: TTGGTGGCCACTGAGGGCGCAGAGGTCCTCTTCTAC...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp ATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGGCAGGGAAGGCTCCAGCGCCTCTATaGACAGCTCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ISGVVLTILEFRLELAGKAPAPL*TAHRAG
Trigger: CCCAGCTCTGTGAGCTGTGCATAGAGGCGCTGGAGC...CTTCCCTGCCAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp ATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGGCAGGGAAGACAGCCTGGATGACGTaGCGCTCCAGCGCCTCTATG +
Preference number: 4 (lower is better)
Translates to: ISGVVLTILEFRLELAGKTAWMT*RSSASM
Trigger: CATAGAGGCGCTGGAGCGGCACGTCATCCAGGCTGT...CTTCCCTGCCAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTCCTTCTGCAGGTATCTaGGCGCCAGCTGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGPSAGI*APAGSE
Trigger: CTCTGATCCAGCTGGCGCGCAGATACCTGCAGAAGG...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TCTTTGAGCAAATTTTGGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCAAGCTGGCCGGCCTGCTaGACCAGCAGGTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLSKFWLKTKDTEGEAPASWPAC*TSRSVG
Trigger: CCCCACTGACCTGCTGGTGCAGCAGGCCGGCCAGCT...TGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GACAGCGTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCAGACGCACTTCATCTTaGCAAGCACAGTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: DSVLCSRNTGTCTQALGGRRTSS*QAQWSI
Trigger: GATGCTCCACTGTGCTTGCCAAGATGAAGTGCGTCT...GCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGACGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR CCA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTCTGCTGTGCTCTCGCTaGGGTAGAGGTCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGLLCSR*GRGPEP
Trigger: TGGTTCAGGACCTCTACCCCAGCGAGAGCACAGCAG...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTTGGGGAACCAGTGTTTaGAGGGTGTCCTCTGCTATC +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPWGTSV*RVSSAI
Trigger: GATAGCAGAGGACACCCTCCAAACACTGGTTCCCCA...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGGGCACCTCGATCATCTaGAGTTTGTACCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRGTSII*SLYPMS
Trigger: TGACATGGGGTACAAACTCCAGATGATCGAGGTGCC...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCGGAGGGTGGTCTAGGTaGGGTTTTAGAAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPGGWSR*GFRSPG
Trigger: CCCAGGGCTTCTAAAACCCCACCTAGACCACCCTCC...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGCCAGAGAGAAGGATCTaGGGCCTTGCTCAGTACCTG +
Preference number: 4 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRPERRI*GLAQYL
Trigger: CAGGTACTGAGCAAGGCCCCAGATCCTTCTCTCTGG...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCAGGCAGAGGCAGCTCTaGAAGAGGAGCTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPRQRQL*KRSCCH
Trigger: GTGGCAACAGCTCCTCTTCCAGAGCTGCCTCTGCCT...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGGAGCACCTTTTACCTaGGGTAGGAGAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LVPGSILGQELLGWKRGAGAPFT*GRRELA
Trigger: AGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCC...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGAGCACCTACCACACTaGGTAATCCTCACACCACCC +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKREHLPH*VILTPP
Trigger: GGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTC...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCAAAGACATCAAAGGCTaGGCTCCACGGCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPKDIKG*APRPPR
Trigger: CCTTGGCGGCCGTGGAGCCCAGCCTTTGATGTCTTT...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCGATCCTGTGCTGCAGTaGACGCTGACTTTCGCCACG +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPDPVLQ*TLTFAT
Trigger: CGTGGCGAAAGTCAGCGTCCACTGCAGCACAGGATC...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGTCTTTTGACTGCAGTTaGGGGAAGGCGCCACCATCT +
Preference number: 4 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRSFDCS*GKAPPS
Trigger: AGATGGTGGCGCCTTCCCTCAACTGCAGTCAAAAGA...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTGCACCACAGAAGCTTTaGAAGACATCAAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPAPQKL*KTSKAG
Trigger: CCCAGCCTTTGATGTCTTTCAAAGCTTCTGTGGTGC...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CCTTGCTCAGTACCTGACATGGAGGGTGGTCTAGGTGGGGTTTTAGAAGCCCTGACAGATCCAGTCACCTaGGGGGATACTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: PCSVPDMEGGLGGVLEALTDPVT*GDTSSL
Trigger: CAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGT...CAGGGCTTCTAAAACCCCACCTAGACCACCCTCCATGTCAGGTACTGAGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GCTTTAGGGATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGACAGATGTCCTGGGCTaGCTGTCGCTCGCAGCTAGC +
Preference number: 4 (lower is better)
Translates to: ALGISGVVLTILEFRLELTDVLG*LSLAAS
Trigger: GCTAGCTGCGAGCGACAGGCAGCCCAGGACATCTGT...CAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGATCCCTAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR GCA 90 bp TCTTTGAGCAAATTTTGGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCAGGTGTGGGCCTCCCCTaGTGGGGGCTGTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SLSKFWLKTKDTEGEAPAGVGLP*WGLWSE
Trigger: TTCTGACCACAGCCCCCAGCAGGGGAGGCCCACACC...TGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGGGAATAGAAGAAACTTaGCAGGAGGTGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRGIEET*QEVQRG
Trigger: TCCTCTCTGCACCTCCTGGCAAGTTTCTTCTATTCC...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCTCTTGGCAAGCACAGTaGAGCATCCAGACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPSWQAQ*SIQTAR
Trigger: TCTGGCCGTCTGGATGCTCCACTGTGCTTGCCAAGA...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAGCTTTAGGGATCAGTaGAGTGGTCTTAACAATCCT +
Preference number: 4 (lower is better)
Translates to: EHGYLHSSLRRHGGPLEPSFRDQ*SGLNNP
Trigger: AGGATTGTTAAGACCACTCCACTGATCCCTAAAGCT...AGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCTATCTGCGCGCCAGCTaGATCAGAGACCAGACCTTA +
Preference number: 4 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGYLRAS*IRDQTL
Trigger: TAAGGTCTGGTCTCTGATCCAGCTGGCGCGCAGATA...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTCCTGACAGCCTCGGTTaGGCGGTTCTTGCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGPDSLG*AVLAVV
Trigger: TACTACAGCAAGAACCGCCCAACCGAGGCTGTCAGG...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCTTGCTCAGTACCTGACATGGAGGGTGGTCTAGGTGGGGTTTTAGAAGCCCTGGGAGCACCTTTTACCTaGGGTAGGAGAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PCSVPDMEGGLGGVLEALGAPFT*GRRELA
Trigger: AGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCC...CAGGGCTTCTAAAACCCCACCTAGACCACCCTCCATGTCAGGTACTGAGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCTTGCTCAGTACCTGACATGGAGGGTGGTCTAGGTGGGGTTTTAGAAGCCCTGGGTGCAGAGAGGAAGTaGCAGCGCTGGAATTCAAAC +
Preference number: 4 (lower is better)
Translates to: PCSVPDMEGGLGGVLEALGAERK*QRWNSN
Trigger: GTTTGAATTCCAGCGCTGCCACTTCCTCTCTGCACC...CAGGGCTTCTAAAACCCCACCTAGACCACCCTCCATGTCAGGTACTGAGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GCAGACAGGAGGCTCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGGAAGCACTAGCATGTTaGGCTTCAGTGATAACAATG +
Preference number: 4 (lower is better)
Translates to: ADRRLSSWGTVASKGGWREALAC*ASVITM
Trigger: CATTGTTATCACTGAAGCCCAACATGCTAGTGCTTC...CCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGAGCCTCCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGCATGAAGGGGCTGGGACTTAGCAAGGGCTTATCAGCACTGACAGAAGGGTCTCAGGAACTTCTCGGTTaGAAGAGAGGGGCTGTACCC +
Preference number: 4 (lower is better)
Translates to: SMKGLGLSKGLSALTEGSQELLG*KRGAVP
Trigger: GGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTG...AGACCCTTCTGTCAGTGCTGATAAGCCCTTGCTAAGTCCCAGCCCCTTCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCTCCCTGGGTCCATTCTaGGACAGGAACTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGSLGPF*DRNFSV
Trigger: AACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGA...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp TGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCCATTCTCCAAACAGGTaGAGGACATACAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CTQALGGTGVHWSLRQMSHSPNR*RTYRKL
Trigger: CAACTTCCTGTATGTCCTTCACCTGTTTGGAGAATG...GGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR TCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGACTTCAAACAGGTACTTaGGCACATACAGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRLQTGT*AHTASA
Trigger: GGCGGAAGCTGTATGTGCTCAAGTACCTGTTTGAAG...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAAGTTGGGCCCGTGGAGTaGGGGCTCCAGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEEVGPVE*GLQACC
Trigger: GCAGCAGGCCTGGAGCCCTCACTCCACGGGCCCAAC...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACGCAGCTCGTAGCACCTaGCAGCCTCGGTTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHAARST*QPRLGG
Trigger: ACCGCCCAACCGAGGCTGTCAGGTGCTACGAGCTGC...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp GCTTTAGGGATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGGTAGAAGAGGACCTCTaGGCCCTCAGTGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: ALGISGVVLTILEFRLELVEEDL*ALSGHQ
Trigger: TTGGTGGCCACTGAGGGCGCAGAGGTCCTCTTCTAC...CAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGATCCCTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR GCA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTCACCAGCCCAAAGTaGACTTCAAACAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LVPGSILGQELLGWKRGAVTSPK*TSNRYL
Trigger: CAAGTACCTGTTTGAAGTGCACTTTGGGCTGGTGAC...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGTGGCTAGAGTAGAATaGCAGCAGCTTGGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGVARVE*QQLGVH
Trigger: GTGCACTCCAAGCTGCTGGCATTCTACTCTAGCCAC...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTCAGCCAGCGGCCCCTTaGCCAACTCCGACGAGGTCT +
Preference number: 4 (lower is better)
Translates to: IERSRGLVKLDISHPAAAQPAAP*PTPTRS
Trigger: AGACCTCGTCGGAGTTGGGCAAGGGGCCGCTGGCTG...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp ATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGGCAGGGAAGAGAATGCCAGCAGCTTaGAGTGCACGAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ISGVVLTILEFRLELAGKRMPAA*SARAGR
Trigger: CCTTCCTGCTCGTGCACTCCAAGCTGCTGGCATTCT...CTTCCCTGCCAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAAGGAAGTGGCAGCGCTaGAATTCAAACCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRRKWQR*NSNPGK
Trigger: TTTGCCTGGGTTTGAATTCCAGCGCTGCCACTTCCT...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCGGTGCAGAGAGGAAGTaGCAGCGCTGGAATTCAAAC +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPGAERK*QRWNSN
Trigger: GTTTGAATTCCAGCGCTGCCACTTCCTCTCTGCACC...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp TCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGCATTCTCCAAACAGGTaGAGGACATACAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SRHGEQWQARVAGGQDAKHSPNR*RTYRKL
Trigger: CAACTTCCTGTATGTCCTTCACCTGTTTGGAGAATG...CTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp ATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGGCAGGGAAGGGTCTTAACAATCCTTaGGTTCAGGCTGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ISGVVLTILEFRLELAGKGLNNP*VQAGAG
Trigger: GCCAGCTCCAGCCTGAACTCAAGGATTGTTAAGACC...CTTCCCTGCCAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCGTGCCCCTCGATTCTTaGCAAACTTGTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPVPLDS*QTCPSS
Trigger: AGAGGATGGACAAGTTTGTCAAGAATCGAGGGGCAC...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAATGCACGGGGATGTTCTaGCTGCTCCGGGCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEECTGMF*LLRALR
Trigger: GCGGAGGGCCCGGAGCAGCCAGAACATCCCCGTGCA...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAAGCTTTCCTTCACGTTaGCATCCAGGAAGATCCTTC +
Preference number: 4 (lower is better)
Translates to: GSLVPGSILGQELLGWKRSFPSR*HPGRSF
Trigger: GAAGGATCTTCCTGGATGCCAACGTGAAGGAAAGCT...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCCTCACTGCCACCTTCTCAGGGTTTAGACCAACATGTGGGTTCTAGTTCCCCCGGCACCTCGATCATCTaGAGTTTGTACCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: SSLPPSQGLDQHVGSSSPGTSII*SLYPMS
Trigger: TGACATGGGGTACAAACTCCAGATGATCGAGGTGCC...GGGGGAACTAGAACCCACATGTTGGTCTAAACCCTGAGAAGGTGGCAGTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCTTTGAGCAAATTTTGGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCAGCCCTATCCTCAGGATaGCCACTGCAGACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLSKFWLKTKDTEGEAPAALSSG*PLQTGG
Trigger: GCCTCCTGTCTGCAGTGGCCATCCTGAGGATAGGGC...TGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCTTTGAGCAAATTTTGGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCAATCCTCACACCACCCTaGGACGGAGGTGCCATCGCT +
Preference number: 4 (lower is better)
Translates to: SLSKFWLKTKDTEGEAPAILTPP*DGGAIA
Trigger: AGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGAT...TGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTGAAGCACTAGCATGTTaGGCTTCAGTGATAACAATG +
Preference number: 4 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSEALAC*ASVITM
Trigger: CATTGTTATCACTGAAGCCCAACATGCTAGTGCTTC...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp GCTTTAGGGATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGTCCTTTCGGATAAGATaGCCGTCCACAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: ALGISGVVLTILEFRLELSFRIR*PSTVTS
Trigger: GCTGGTGACTGTGGACGGTCATCTTATCCGAAAGGA...CAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGATCCCTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR TCA 90 bp GCTTTAGGGATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGGGTCTTAACAATCCTTaGGTTCAGGCTGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALGISGVVLTILEFRLELGLNNP*VQAGAG
Trigger: GCCAGCTCCAGCCTGAACTCAAGGATTGTTAAGACC...CAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGATCCCTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR TCA 90 bp TCTTTGAGCAAATTTTGGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCATCAGCTTCTCCCGCATaGGCCTCTGCACTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLSKFWLKTKDTEGEAPASASPA*ASALGP
Trigger: AGGACCAAGTGCAGAGGCTCATGCGGGAGAAGCTGA...TGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAAGGGCTCCAGGCCTGCTaGACGGGGATGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEEGLQAC*TGMFWL
Trigger: CAGCCAGAACATCCCCGTGCAGCAGGCCTGGAGCCC...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACCTCTGCACTTGGTCCTaGAGGTGCTGGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHLCTWS*RCWGRC
Trigger: ACACCTGCCCCAGCACCTGCAGGACCAAGTGCAGAG...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp AGCATGAAGGGGCTGGGACTTAGCAAGGGCTTATCAGCACTGACAGAAGGGTCTGGAATAGAAGAAACTTaGCAGGAGGTGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SMKGLGLSKGLSALTEGSGIEET*QEVQRG
Trigger: TCCTCTCTGCACCTCCTGGCAAGTTTCTTCTATTCC...AGACCCTTCTGTCAGTGCTGATAAGCCCTTGCTAAGTCCCAGCCCCTTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACCCTCTGCGCCCTCAGTaGCCACCAAGACGCACTTCA +
Preference number: 4 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHPLRPQ*PPRRTS
Trigger: TGAAGTGCGTCTTGGTGGCCACTGAGGGCGCAGAGG...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCTTTGAGCAAATTTTGGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCAGAAGGCACAGGGCAGTaGGGAACCAGTGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLSKFWLKTKDTEGEAPAEGTGQ*GTSVWR
Trigger: CCTCCAAACACTGGTTCCCCACTGCCCTGTGCCTTC...TGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TCTTTGAGCAAATTTTGGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCAAACTTGTCCATCCTCTaGCGCAGGTCTCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: SLSKFWLKTKDTEGEAPANLSIL*RRSPTR
Trigger: CCTCGTGGGAGACCTGCGCCAGAGGATGGACAAGTT...TGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACCAGCACCGGCCTCCTaGCCTCAGAGGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEEPAPAS*PQRSRH
Trigger: GTGTCTGCTCCTCTGAGGCCAGGAGGCCGGTGCTGG...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp AGCATGAAGGGGCTGGGACTTAGCAAGGGCTTATCAGCACTGACAGAAGGGTCTCATTCTCCAAACAGGTaGAGGACATACAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SMKGLGLSKGLSALTEGSHSPNR*RTYRKL
Trigger: CAACTTCCTGTATGTCCTTCACCTGTTTGGAGAATG...AGACCCTTCTGTCAGTGCTGATAAGCCCTTGCTAAGTCCCAGCCCCTTCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGCAGCTCGTAGCACCTaGCAGCCTCGGTTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEAARST*QPRLGG
Trigger: ACCGCCCAACCGAGGCTGTCAGGTGCTACGAGCTGC...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACAGGGGTCCTGAACAGTaGTGGGCTCAGGGGATTGGA +
Preference number: 4 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHRGPEQ*WAQGIG
Trigger: TCCAATCCCCTGAGCCCACCACTGTTCAGGACCCCT...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGCATGCCGATAGGCACTaGGTCGTCGGAGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEHADRH*VVGEDG
Trigger: CCCGTCCTCTCCGACGACTCAGTGCCTATCGGCATG...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGCCACCCTGGGCACTCTaGCCTATCCTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEPPWAL*PILRMA
Trigger: GGCCATCCTGAGGATAGGGCAGAGTGCCCAGGGTGG...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGGCGAGGCTCCTGCATaGACAGCACACGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEGEAPA*TAHGHL
Trigger: CAGATGGCCGTGTGCTGTGCATGCAGGAGCCTCGCC...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTAGAATGCCAGCAGCTTaGAGTGCACGAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: IERSRGLVKLDISHPAAARMPAA*SARAGR
Trigger: CCTTCCTGCTCGTGCACTCCAAGCTGCTGGCATTCT...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACCCTGACAGCCTCGGTTaGGCGGTTCTTGCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHPDSLG*AVLAVV
Trigger: TACTACAGCAAGAACCGCCCAACCGAGGCTGTCAGG...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAAAGAGAGCTTGCTGGGTaGGCTTCCTCCACGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEERELAG*ASSTQG
Trigger: TCCCTGCGTGGAGGAAGCCCACCCAGCAAGCTCTCT...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACTCCTTTCGGATAAGATaGCCGTCCACAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHSFRIR*PSTVTS
Trigger: GCTGGTGACTGTGGACGGTCATCTTATCCGAAAGGA...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTGGTAGGACACCATGGTaGTGTTCCTCCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: IERSRGLVKLDISHPAAAGRTPW*CSSCSS
Trigger: TGAAGAGCAGGAGGAACATCACCATGGTGTCCTACC...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGCCAGCAGCTTGGAGTaGACGAGCAGGAAGGCATGC +
Preference number: 4 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEASSLE*TSRKAC
Trigger: GCATGCCTTCCTGCTCGTGCACTCCAAGCTGCTGGC...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp CCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAACACGTGGCTAGAGTAGAATaGCAGCAGCTTGGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: PQSTLFIAIPSDDVKEEHVARVE*QQLGVH
Trigger: GTGCACTCCAAGCTGCTGGCATTCTACTCTAGCCAC...GTGTTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp ATCAGTGGAGTGGTCTTAACAATCCTTGAGTTCAGGCTGGAGCTGGCAGGGAAGAGCTTTAGGGATCAGTaGAGTGGTCTTAACAATCCT +
Preference number: 4 (lower is better)
Translates to: ISGVVLTILEFRLELAGKSFRDQ*SGLNNP
Trigger: AGGATTGTTAAGACCACTCCACTGATCCCTAAAGCT...CTTCCCTGCCAGCTCCAGCCTGAACTCAAGGATTGTTAAGACCACTCCACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAAGATCCTGTGCTGCAGTaGACGCTGACTTTCGCCACG +
Preference number: 4 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEEDPVLQ*TLTFAT
Trigger: CGTGGCGAAAGTCAGCGTCCACTGCAGCACAGGATC...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTGTGCCCCTCGATTCTTaGCAAACTTGTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: IERSRGLVKLDISHPAAAVPLDS*QTCPSS
Trigger: AGAGGATGGACAAGTTTGTCAAGAATCGAGGGGCAC...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGTCAGCTTCTCCCGCATaGGCCTCTGCACTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKESASPA*ASALGP
Trigger: AGGACCAAGTGCAGAGGCTCATGCGGGAGAAGCTGA...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTAGACGCACTTCATCTTaGCAAGCACAGTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: IERSRGLVKLDISHPAAARRTSS*QAQWSI
Trigger: GATGCTCCACTGTGCTTGCCAAGATGAAGTGCGTCT...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGCCAGGGGAAGGAGCTaGTGTGAAGTACTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEARGRS*CEVLLR
Trigger: CCTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGC...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAATCCTTTCGGATAAGATaGCCGTCCACAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEESFRIR*PSTVTS
Trigger: GCTGGTGACTGTGGACGGTCATCTTATCCGAAAGGA...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGCAGCATCCCTGGTCCTaGAAATGCTCACTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEQHPWS*KCSLPG
Trigger: TCCCGGAAGTGAGCATTTGCAGGACCAGGGATGCTG...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325103.10
CDS-3UTR GCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTGCTCTGAATCTCCTGTaGCCCTCGATTCTTGACAAA +
Preference number: 4 (lower is better)
Translates to: IERSRGLVKLDISHPAAAALNLL*PSILDK
Trigger: TTTGTCAAGAATCGAGGGGCACAGGAGATTCAGAGC...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR TCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTATGACCAACATTTATTaGGCACCTACCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: IERSRGLVKLDISHPAAAMTNIY*APTTLG
Trigger: ACCCAGTGTGGTAGGTGCTCAATAAATGTTGGTCAT...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTTGGAAGAGGAGCTGTTaGCACCGTTGTTTTACAAAC +
Preference number: 4 (lower is better)
Translates to: IERSRGLVKLDISHPAAAWKRSC*HRCFTN
Trigger: GTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCA...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CCA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAAAGGAAGTGGCAGCGCTaGAATTCAAACCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEERKWQR*NSNPGK
Trigger: TTTGCCTGGGTTTGAATTCCAGCGCTGCCACTTCCT...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR GCA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGCTCTGAATCTCCTGTaGCCCTCGATTCTTGACAAA +
Preference number: 4 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKEALNLL*PSILDK
Trigger: TTTGTCAAGAATCGAGGGGCACAGGAGATTCAGAGC...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS GCA 90 bp GGGATACGGGAGGCCTCCCAGAGGCGCCGGGCCAGCTGGCCGGCCTaGTGCACCAGCAGGTCAGTGGGGATGACAGACAGGTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GIREASQRRRASWPA*CTSRSVGMTDRCRA
Trigger: GGCCCTGCACCTGTCTGTCATCCCCACTGACCTGCTGGTGCAGCAGGCCGGCCAGCTGGCCCGGCGCCTCTGGGAGGCCTCCCGTATCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000467246.5
CDS GCA 90 bp ATACGGGAGGCCTCCCAGAGGCGCCGGGCCAGCTGGCCGGCCTGCTaGACCAGCAGGTCAGTGGGGATGACAGACAGGTGCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: IREASQRRRASWPAC*TSRSVGMTDRCRAS
Trigger: GCTGGCCCTGCACCTGTCTGTCATCCCCACTGACCTGCTGGTGCAGCAGGCCGGCCAGCTGGCCCGGCGCCTCTGGGAGGCCTCCCGTAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000467246.5
CDS TCA 90 bp CCTCTGCTGTGCTCTCGCTGGGGTAGAGGTCCTGAACCAGGAGGATaGGGGCAAGCAGGTCGGCCGGGCGCAGGGAGCTGGCACTGTGGC +
Preference number: 5 (lower is better)
Translates to: PLLCSRWGRGPEPGG*GQAGRPGAGSWHCG
Trigger: GCCACAGTGCCAGCTCCCTGCGCCCGGCCGACCTGCTTGCCCTCATCCTCCTGGTTCAGGACCTCTACCCCAGCGAGAGCACAGCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000325103.10
ENST00000338546.9
ENST00000359632.7
ENST00000361490.9
ENST00000414009.1
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
ENST00000480020.5
ENST00000498219.5
CDS CCA 90 bp GGGAGGCCCCGGGCTCCGGCCCTTCCTTCAGCTTCTTCTCCAGCATaGAGAAGCCATCCATCAGCTGGGACAGAACCAGGGCCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: GRPRAPALPSASSPA*RSHPSAGTEPGPGA
Trigger: CGCCCCTGGCCCTGGTTCTGTCCCAGCTGATGGATGGCTTCTCCATGCTGGAGAAGAAGCTGAAGGAAGGGCCGGAGCCCGGGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
ENST00000497527.1
CDS CCA 90 bp TTGACAAACTTGTCCATCCTCTGGCGCAGGTCTCCCACGAGGGGCTaGGAGCGCAGGGAGGCCCCGGGCTCCGGCCCTTCCTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LTNLSILWRRSPTRG*ERREAPGSGPSFSF
Trigger: GAAGCTGAAGGAAGGGCCGGAGCCCGGGGCCTCCCTGCGCTCCCAGCCCCTCGTGGGAGACCTGCGCCAGAGGATGGACAAGTTTGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
ENST00000497527.1
CDS-3UTR CAA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACGTCAGGAGCACCAGGTaGATGCCCTGCCACAGGGGC +
Preference number: 5 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHVRSTR*MPCHRG
Trigger: GCCCCTGTGGCAGGGCATCAACCTGGTGCTCCTGAC...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACCATGAGCCTCTGCACTaGGTCCTGCAGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHHEPLH*VLQVLG
Trigger: CCCCAGCACCTGCAGGACCAAGTGCAGAGGCTCATG...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS TCA 90 bp GCTCTCACCTCCGAAGGAAGGAAAGGGCACAGCCGAGAAGCTCCGTaGGTGCCAGGGGCCTCTCCTAGTACCCGGGCACTGCCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: ALTSEGRKGHSREAP*VPGASPSTRALPWL
Trigger: GAGCCAAGGCAGTGCCCGGGTACTAGGAGAGGCCCCTGGCACTCACGGAGCTTCTCGGCTGTGCCCTTTCCTTCCTTCGGAGGTGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CCA 90 bp GGCCTCCCCTGCTGGGGGCTGTGGTCAGAAAGTTCAGCCGGTAGATaGCGCAGAGCTGCCGCTTCAGCTTCCCACATGCCTGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GLPCWGLWSESSAGR*RRAAASASHMPGAA
Trigger: AGCTGCTCCAGGCATGTGGGAAGCTGAAGCGGCAGCTCTGCGCCATCTACCGGCTGAACTTTCTGACCACAGCCCCCAGCAGGGGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
CDS-3UTR CAA 90 bp GACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTGCAGCCAGCGGCCCCTaGCCCAACTCCGACGAGGTC +
Preference number: 5 (lower is better)
Translates to: DRNFSVGREGLYPSGGGSAASGP*PNSDEV
Trigger: GACCTCGTCGGAGTTGGGCAAGGGGCCGCTGGCTGC...AGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS GCA 90 bp TCACCTCCGAAGGAAGGAAAGGGCACAGCCGAGAAGCTCCGTGAGTaGCAGGGGCCTCTCCTAGTACCCGGGCACTGCCTTGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SPPKEGKGTAEKLRE*QGPLLVPGHCLGSE
Trigger: CTCTGAGCCAAGGCAGTGCCCGGGTACTAGGAGAGGCCCCTGGCACTCACGGAGCTTCTCGGCTGTGCCCTTTCCTTCCTTCGGAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS-3UTR CAA 90 bp GTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGCGCTCGGGGCTGGTGTaGACAGCCTGGATGACGTGC +
Preference number: 5 (lower is better)
Translates to: VLCSRNTGTCTQALGGTGRSGLV*TAWMTC
Trigger: GCACGTCATCCAGGCTGTCAACACCAGCCCCGAGCG...CCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS-3UTR CAA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTCGCTCGGGGCTGGTGTaGACAGCCTGGATGACGTGC +
Preference number: 5 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFRSGLV*TAWMTC
Trigger: GCACGTCATCCAGGCTGTCAACACCAGCCCCGAGCG...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp GGAACACAGATCCAGTCACCTGAGGGGATACTTCCTCACTGCCACCTTCTCAGGGCAGCCAGCGGCCCCTaGCCCAACTCCGACGAGGTC +
Preference number: 5 (lower is better)
Translates to: GTQIQSPEGILPHCHLLRAASGP*PNSDEV
Trigger: GACCTCGTCGGAGTTGGGCAAGGGGCCGCTGGCTGC...CCTGAGAAGGTGGCAGTGAGGAAGTATCCCCTCAGGTGACTGGATCTGTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGGACCAGACCTTAGTTTaGACAAAGGCAGCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: APRPPRESKSLGQGQGLEDQTLV*TKAASG
Trigger: GCCGCTGGCTGCCTTTGTCAAAACTAAGGTCTGGTC...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS GCA 90 bp CCTGGGGAAAAGACAGCAAGCATCACCACTCTCCCAGCCTTGGTCTaGCTGGGCAGCTCTCACCTCCGAAGGAAGGAAAGGGCACAGCCG +
Preference number: 5 (lower is better)
Translates to: PGEKTASITTLPALV*LGSSHLRRKERAQP
Trigger: CGGCTGTGCCCTTTCCTTCCTTCGGAGGTGAGAGCTGCCCAGGCAGACCAAGGCTGGGAGAGTGGTGATGCTTGCTGTCTTTTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CCA 90 bp AACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGGTCCACTaGAGCCTAAGACAGATGTCCTGGGCTGCCTGTCGCTCGCAGCTA +
Preference number: 5 (lower is better)
Translates to: NTGTCTQALGGTGVH*SLRQMSWAACRSQL
Trigger: TAGCTGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS CCA 90 bp GGGGGCAGTAGCTTTCCTTCACGTTGGCATCCAGGAAGATCCTTCTaGGGCCGGAAGGCACAGGGCAGTGGGGAACCAGTGTTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GGSSFPSRWHPGRSF*GRKAQGSGEPVFGG
Trigger: CCCTCCAAACACTGGTTCCCCACTGCCCTGTGCCTTCCGGCCCCAGAAGGATCTTCCTGGATGCCAACGTGAAGGAAAGCTACTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000497527.1
CDS-3UTR CAA 90 bp GCAAAGGAGCACCTTTTACCTGGGGTAGGAGAGAGCTTGCTGGGTGGGCTTCCTGTCAGGAGCACCAGGTaGATGCCCTGCCACAGGGGC +
Preference number: 5 (lower is better)
Translates to: AKEHLLPGVGESLLGGLPVRSTR*MPCHRG
Trigger: GCCCCTGTGGCAGGGCATCAACCTGGTGCTCCTGAC...AGGAAGCCCACCCAGCAAGCTCTCTCCTACCCCAGGTAAAAGGTGCTCCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGCGATTCTTGACAAACTaGTCCATCCTCTGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: APRPPRESKSLGQGQGLERFLTN*SILWRR
Trigger: CCTGCGCCAGAGGATGGACAAGTTTGTCAAGAATCG...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp GCTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGGATCCGGGCTCACTTTaGGAGAAAGCCTTGGCCTTA +
Preference number: 5 (lower is better)
Translates to: APRPPRESKSLGQGQGLEDPGSL*EKALAL
Trigger: TAAGGCCAAGGCTTTCTCCAAAAGTGAGCCCGGATC...CTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS TCA 90 bp TCCGGTCCTCACCTGAGCTCTGATCGCCAGGGGAAGGAGCTGGTGTaGAGTACTCCTCAGGGAGGGAGAAGCTGTCTGTCTCCGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SGPHLSSDRQGKELV*STPQGGRSCLSPSL
Trigger: CAGAGACGGAGACAGACAGCTTCTCCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGCGATCAGAGCTCAGGTGAGGACCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS GCA 90 bp AGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTaGCTGTCGCTCGCAGCTAGCTATTGTTTCCTCCTGCTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RRHGGPLEPKTDVLG*LSLAASYCFLLLSS
Trigger: GGAGGAAAGCAGGAGGAAACAATAGCTAGCTGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS CCA 90 bp AGACAGGTGCAGGGCCAGCAGCTCGTAGCACCTGACAGCCTCGGTTaGGCGGTTCTTGCTGTAGTAGCGCAGGAGCTTCCTGTAGTAGTC +
Preference number: 5 (lower is better)
Translates to: RQVQGQQLVAPDSLG*AVLAVVAQELPVVV
Trigger: GACTACTACAGGAAGCTCCTGCGCTACTACAGCAAGAACCGCCCAACCGAGGCTGTCAGGTGCTACGAGCTGCTGGCCCTGCACCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000467246.5
CDS-3UTR CAA 90 bp GGAAGAGAGGGGCTGTACCCCTCGGGTGGTGGTTCTCAATCCAGGGCGCACCACCGATTCTTGACAAACTaGTCCATCCTCTGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: GREGLYPSGGGSQSRAHHRFLTN*SILWRR
Trigger: CCTGCGCCAGAGGATGGACAAGTTTGTCAAGAATCG...GTGGTGCGCCCTGGATTGAGAACCACCACCCGAGGGGTACAGCCCCTCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACTGTGCCCCTCGATTCTaGACAAACTTGTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHCAPRF*TNLSIL
Trigger: GAGGATGGACAAGTTTGTCAAGAATCGAGGGGCACA...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS CCA 90 bp GCCTTAGGAGGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTaGGCTGCCTGTCGCTCGCAGCTAGCTATTGTTTCCTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: ALGGTGVHWSLRQMS*AACRSQLAIVSSCF
Trigger: AAAGCAGGAGGAAACAATAGCTAGCTGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCCTCCTAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS CCA 90 bp GGGAAAAGACAGCAAGCATCACCACTCTCCCAGCCTTGGTCTGCCTaGGCAGCTCTCACCTCCGAAGGAAGGAAAGGGCACAGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: GKRQQASPLSQPWSA*AALTSEGRKGHSRE
Trigger: TTCTCGGCTGTGCCCTTTCCTTCCTTCGGAGGTGAGAGCTGCCCAGGCAGACCAAGGCTGGGAGAGTGGTGATGCTTGCTGTCTTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CCA 90 bp CCCTTCTGCAGGTATCTGCGCGCCAGCTGGATCAGAGACCAGACCTaGGGAAAAGACAGCAAGCATCACCACTCTCCCAGCCTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: PFCRYLRASWIRDQT*GKDSKHHHSPSLGL
Trigger: CAGACCAAGGCTGGGAGAGTGGTGATGCTTGCTGTCTTTTCCCCAGGTCTGGTCTCTGATCCAGCTGGCGCGCAGATACCTGCAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS-3UTR CAA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGGCTCTCAGGGTCTCTaGTCCCTGGGTCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: LVPGSILGQELLGWKRGAGSQGL*SLGPFW
Trigger: CCAGAATGGACCCAGGGACAAGAGACCCTGAGAGCC...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS TCA 90 bp AGATGGTGCTACCTGAGCTCTGATCGCCAGGGGAAGGAGCTGGTGTaGAGTACTCCTCAGGGAGGGAGAAGCTGTCTGTCTCCGTCTCTG +
Preference number: 5 (lower is better)
Translates to: RWCYLSSDRQGKELV*STPQGGRSCLSPSL
Trigger: CAGAGACGGAGACAGACAGCTTCTCCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGCGATCAGAGCTCAGGTAGCACCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS TCA 90 bp TCCGGTCCTCACCTGAGCTCTGATCGCCAGGGGAAGGAGCTGGTGTaGAGTACTCCTCAGGGAGGGAGAAGCTGTCTGTCTCCTGAATGT +
Preference number: 5 (lower is better)
Translates to: SGPHLSSDRQGKELV*STPQGGRSCLSPEC
Trigger: ACATTCAGGAGACAGACAGCTTCTCCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGCGATCAGAGCTCAGGTGAGGACCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414009.1
CDS TCA 90 bp GCAGCGTCACCTGTAGTAGTCTCCTCCCAGCATGCCGATAGGCACTaGGTCGTCGGAGAGGACGGGCACCTCGATCATCTGGAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: AASPVVVSSQHADRH*VVGEDGHLDHLEFV
Trigger: TACAAACTCCAGATGATCGAGGTGCCCGTCCTCTCCGACGACTCAGTGCCTATCGGCATGCTGGGAGGAGACTACTACAGGTGACGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CCA 90 bp ACAGGAAGTAGGAGCAGTAGAAATCCCCCTCCTGGAACAGCAGCGTaGTGTAGCCCTTCTGCAGGTATCTGCGCGCCAGCTGGATCAGAG +
Preference number: 5 (lower is better)
Translates to: TGSRSSRNPPPGTAA*CSPSAGICAPAGSE
Trigger: CTCTGATCCAGCTGGCGCGCAGATACCTGCAGAAGGGCTACACCACGCTGCTGTTCCAGGAGGGGGATTTCTACTGCTCCTACTTCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000462743.1
ENST00000467246.5
CDS CCA 90 bp TTCTTGCCCTCATTTAGTCCAGAGAGGACTGGTGGGGTGTGGGGGTaGGGTCACCGAGCTCAGAGCATCAAGAGGCCAACCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: FLPSFSPERTGGVWG*GHRAQSIKRPTSSS
Trigger: GGAAGAAGAGGTTGGCCTCTTGATGCTCTGAGCTCGGTGACCCCACCCCCACACCCCACCAGTCCTCTCTGGACTAAATGAGGGCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465957.1
CDS-3UTR CAA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCGGCTCTCAGGGTCTCTaGTCCCTGGGTCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGGSQGL*SLGPFW
Trigger: CCAGAATGGACCCAGGGACAAGAGACCCTGAGAGCC...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS TCA 90 bp TCGCAGCTAGCTATTGTTTCCTCCTGCTTTCCTCCGGTCCTCACCTaGGCTCTGATCGCCAGGGGAAGGAGCTGGTGTGAAGTACTCCTC +
Preference number: 5 (lower is better)
Translates to: SQLAIVSSCFPPVLT*ALIARGRSWCEVLL
Trigger: GAGGAGTACTTCACACCAGCTCCTTCCCCTGGCGATCAGAGCTCAGGTGAGGACCGGAGGAAAGCAGGAGGAAACAATAGCTAGCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS TCA 90 bp CAGGAGCTTCCTGTAGTAGTCTCCTCCCAGCATGCCGATAGGCACTaGGTCGTCGGAGAGGACGGGCACCTCGATCATCTGGAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: QELPVVVSSQHADRH*VVGEDGHLDHLEFV
Trigger: TACAAACTCCAGATGATCGAGGTGCCCGTCCTCTCCGACGACTCAGTGCCTATCGGCATGCTGGGAGGAGACTACTACAGGAAGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000467246.5
CDS-3UTR CAA 90 bp TCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGTGGGGAACCAGTGTTaGGAGGGTGTCCTCTGCTAT +
Preference number: 5 (lower is better)
Translates to: SRHGEQWQARVAGGQDAKVGNQC*EGVLCY
Trigger: ATAGCAGAGGACACCCTCCAAACACTGGTTCCCCAC...CTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGGAGCTGTTGCCACCGTaGTTTTACAAACAGGACCCC +
Preference number: 5 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRELLPP*FYKQDP
Trigger: GGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTC...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp CCTGTGCTGCAGTGGACGCTGACTTTCGCCACGCCGTCCTCTCTGGCCCAGCACAATCCACGCTTTTCATaGCCATTCCATCAGATGATG +
Preference number: 5 (lower is better)
Translates to: PVLQWTLTFATPSSLAQHNPRFS*PFHQMM
Trigger: CATCATCTGATGGAATGGCAATGAAAAGCGTGGATT...GTGCTGGGCCAGAGAGGACGGCGTGGCGAAAGTCAGCGTCCACTGCAGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS TCA 90 bp AGATGGTGCTACCTGAGCTCTGATCGCCAGGGGAAGGAGCTGGTGTaGAGTACTCCTCAGGGAGGGAGAAGCTGTCTGTCTCCTGAATGT +
Preference number: 5 (lower is better)
Translates to: RWCYLSSDRQGKELV*STPQGGRSCLSPEC
Trigger: ACATTCAGGAGACAGACAGCTTCTCCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGCGATCAGAGCTCAGGTAGCACCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359632.7
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
ENST00000498219.5
CDS-3UTR CAA 90 bp GTCCTGTGCTCTAGGAACACGGGTACCTGCACTCAAGCCTTAGGAGGCACGGGGACTTCAAACAGGTACTaGAGCACATACAGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: VLCSRNTGTCTQALGGTGTSNRY*STYSFR
Trigger: GCGGAAGCTGTATGTGCTCAAGTACCTGTTTGAAGT...CCCCGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338546.9
CDS-3UTR CAA 90 bp CCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGCCATCGCTTTCTTTTGGAGAAAGCCTaGGCCTTAAACTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PTTLGNPHTTLGRRCHRFLLEKA*ALNSSQ
Trigger: CTGGCTGGAGTTTAAGGCCAAGGCTTTCTCCAAAAG...AAAGCGATGGCACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp AGCTCTGGAAGAGGAGCTGTTGCCACCGTTGTTTTACAAACAGGACCCCTGGGCCTCCGACGAGGTCTTTaGACTGCAGTTGAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SSGRGAVATVVLQTGPLGLRRGL*TAVEGR
Trigger: CCTTCCCTCAACTGCAGTCAAAAGACCTCGTCGGAG...GCCCAGGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGACCAGACCTTAGTTTaGACAAAGGCAGCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: GSLVPGSILGQELLGWKRDQTLV*TKAASG
Trigger: GCCGCTGGCTGCCTTTGTCAAAACTAAGGTCTGGTC...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTGAGCTGTTGCCACCGTaGTTTTACAAACAGGACCCC +
Preference number: 5 (lower is better)
Translates to: LVPGSILGQELLGWKRGAELLPP*FYKQDP
Trigger: GGGGTCCTGTTTGTAAAACAACGGTGGCAACAGCTC...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp CTCCACGGCCGCCAAGGGAATCCAAATCTCTGGGCCAGGGCCAGGGGCTTGAGAAGAAGCACTAGCATGTaGGGCTTCAGTGATAACAAT +
Preference number: 5 (lower is better)
Translates to: LHGRQGNPNLWARARGLRRSTSM*GFSDNN
Trigger: ATTGTTATCACTGAAGCCCAACATGCTAGTGCTTCT...TCTCAAGCCCCTGGCCCTGGCCCAGAGATTTGGATTCCCTTGGCGGCCGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTGTGGGGAACCAGTGTTaGGAGGGTGTCCTCTGCTAT +
Preference number: 5 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGVGNQC*EGVLCY
Trigger: ATAGCAGAGGACACCCTCCAAACACTGGTTCCCCAC...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGCTTTTGGAGAAAGCCTaGGCCTTAAACTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SRHGEQWQARVAGGQDAKLLEKA*ALNSSQ
Trigger: CTGGCTGGAGTTTAAGGCCAAGGCTTTCTCCAAAAG...CTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTCTCCGACGAGGTCTTTaGACTGCAGTTGAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGLRRGL*TAVEGR
Trigger: CCTTCCCTCAACTGCAGTCAAAAGACCTCGTCGGAG...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGCGCACCACAGAAGCTTaGAAAGACATCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SRHGEQWQARVAGGQDAKRTTEA*KDIKGW
Trigger: CCAGCCTTTGATGTCTTTCAAAGCTTCTGTGGTGCG...CTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp CTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGGGGCTCGCACCACAGAAGCTTaGAAAGACATCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LVPGSILGQELLGWKRGARTTEA*KDIKGW
Trigger: CCAGCCTTTGATGTCTTTCAAAGCTTCTGTGGTGCG...AGCCCCTCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TCTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGACTTCAAACAGGTACTaGAGCACATACAGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: SRHGEQWQARVAGGQDAKTSNRY*STYSFR
Trigger: GCGGAAGCTGTATGTGCTCAAGTACCTGTTTGAAGT...CTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS TCA 90 bp GGACAGAGGGGACCAGCTTTGAAGACTCACTCCTTTCGGATAAGATaGCCGTCCACAGTCACCAGCCCAAAGTGCACTTCAAACAGGTAC +
Preference number: 5 (lower is better)
Translates to: GQRGPALKTHSFRIR*PSTVTSPKCTSNRY
Trigger: GTACCTGTTTGAAGTGCACTTTGGGCTGGTGACTGTGGACGGTCATCTTATCCGAAAGGAGTGAGTCTTCAAAGCTGGTCCCCTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474873.5
CDS-3UTR CAA 90 bp GGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGACTGGAAGAGGAGCTGTaGCCACCGTTGTTTTACAAA +
Preference number: 5 (lower is better)
Translates to: GSLVPGSILGQELLGWKRLEEEL*PPLFYK
Trigger: TTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAG...TCTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp CTCGTCATGGGGAACAGTGGCAAGCAAGGGTGGCTGGAGGACAGGATGCAAAGGAATCCACGCTTTTCATaGCCATTCCATCAGATGATG +
Preference number: 5 (lower is better)
Translates to: LVMGNSGKQGWLEDRMQRNPRFS*PFHQMM
Trigger: CATCATCTGATGGAATGGCAATGAAAAGCGTGGATT...CCTTTGCATCCTGTCCTCCAGCCACCCTTGCTTGCCACTGTTCCCCATGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TTTATTGAGCACCTACCACACTGGGTAATCCTCACACCACCCTGGGACGGAGGTACTTCAAACAGGTACTaGAGCACATACAGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: FIEHLPHWVILTPPWDGGTSNRY*STYSFR
Trigger: GCGGAAGCTGTATGTGCTCAAGTACCTGTTTGAAGT...ACCTCCGTCCCAGGGTGGTGTGAGGATTACCCAGTGTGGTAGGTGCTCAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp AGGGTCTCTTGTCCCTGGGTCCATTCTGGGACAGGAACTTCTCGGTTGGAAGAGAGAAGCACTAGCATGTaGGGCTTCAGTGATAACAAT +
Preference number: 5 (lower is better)
Translates to: RVSCPWVHSGTGTSRLEERSTSM*GFSDNN
Trigger: ATTGTTATCACTGAAGCCCAACATGCTAGTGCTTCT...CTCTTCCAACCGAGAAGTTCCTGTCCCAGAATGGACCCAGGGACAAGAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp ATAGAAAGATCAAGGGGACTGGTTAAACTAGACATATCACATCCAGCCGCTGCTACAGGAACTTCTCGGTaGGAAGAGAGGGGCTGTACC +
Preference number: 5 (lower is better)
Translates to: IERSRGLVKLDISHPAAATGTSR*EERGCT
Trigger: GGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGT...AGCAGCGGCTGGATGTGATATGTCTAGTTTAACCAGTCCCCTTGATCTTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TCTTTGAGCAAATTTTGGCTCAAGACTAAAGACACAGAAGGCGAGGCTCCTGCATCGATCATCTGGAGTTaGTACCCCATGTCATTCTCG +
Preference number: 5 (lower is better)
Translates to: SLSKFWLKTKDTEGEAPASIIWS*YPMSFS
Trigger: CGAGAATGACATGGGGTACAAACTCCAGATGATCGA...TGCAGGAGCCTCGCCTTCTGTGTCTTTAGTCTTGAGCCAAAATTTGCTCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAAACAGGAACTTCTCGGTaGGAAGAGAGGGGCTGTACC +
Preference number: 5 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEETGTSR*EERGCT
Trigger: GGTACAGCCCCTCTCTTCCAACCGAGAAGTTCCTGT...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGGAATGTGCCCCTCGATTCTaGACAAACTTGTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: FPQSTLFIAIPSDDVKEECAPRF*TNLSIL
Trigger: GAGGATGGACAAGTTTGTCAAGAATCGAGGGGCACA...TTCCTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS-3UTR CAA 90 bp TATTTTCCACAATCCACGCTTTTCATTGCCATTCCATCAGATGATGTTAAGGAGCTGGAAGAGGAGCTGTaGCCACCGTTGTTTTACAAA +
Preference number: 5 (lower is better)
Translates to: YFPQSTLFIAIPSDDVKELEEEL*PPLFYK
Trigger: TTTGTAAAACAACGGTGGCAACAGCTCCTCTTCCAG...CTCCTTAACATCATCTGATGGAATGGCAATGAAAAGCGTGGATTGTGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325103.10
ENST00000361490.9
CDS CCA 72 bp TTGTCCATCCTCTGGCGCAGGTCTCCCACGAGGGGCTaGGAGCGCAGGGAGGCCCCGGGCTCCGGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: LSILWRRSPTRG*ERREAPGSGPS
Trigger: GGAAGGGCCGGAGCCCGGGGCCTCCCTGCGCTCCCAGCCCCTCGTGGGAGACCTGCGCCAGAGGATGGACAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
ENST00000497527.1
CDS GCA 72 bp GCCTCCCAGAGGCGCCGGGCCAGCTGGCCGGCCTGCTaGACCAGCAGGTCAGTGGGGATGACAGACAGGTGC +
Preference number: 6 (lower is better)
Translates to: ASQRRRASWPAC*TSRSVGMTDRC
Trigger: GCACCTGTCTGTCATCCCCACTGACCTGCTGGTGCAGCAGGCCGGCCAGCTGGCCCGGCGCCTCTGGGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000467246.5
CDS CCA 72 bp TCCTCGCCTCCCCGCTCGGGGCTGGTGTTGACAGCCTaGATGACGTGCCGCTCCAGCGCCTCTATGCACAGC +
Preference number: 6 (lower is better)
Translates to: SSPPRSGLVLTA*MTCRSSASMHS
Trigger: GCTGTGCATAGAGGCGCTGGAGCGGCACGTCATCCAGGCTGTCAACACCAGCCCCGAGCGGGGAGGCGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325103.10
ENST00000338546.9
ENST00000359632.7
ENST00000361490.9
ENST00000414009.1
ENST00000467246.5
ENST00000478087.5
ENST00000480020.5
CDS GCA 72 bp CCCCGCTCGGGGCTGGTGTTGACAGCCTGGATGACGTaGCGCTCCAGCGCCTCTATGCACAGCTCACAGAGC +
Preference number: 6 (lower is better)
Translates to: PRSGLVLTAWMT*RSSASMHSSQS
Trigger: GCTCTGTGAGCTGTGCATAGAGGCGCTGGAGCGGCACGTCATCCAGGCTGTCAACACCAGCCCCGAGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325103.10
ENST00000338546.9
ENST00000359632.7
ENST00000361490.9
ENST00000414009.1
ENST00000467246.5
ENST00000478087.5
ENST00000480020.5
CDS TCA 72 bp GAATCAGTCGCTCCAGGGCCTGACAGCTTCAAGTCCTaGGGACTCCCGCGCCCAGTAGTCACCTCCACGGCG +
Preference number: 6 (lower is better)
Translates to: ESVAPGPDSFKS*GLPRPVVTSTA
Trigger: CGCCGTGGAGGTGACTACTGGGCGCGGGAGTCCTCAGGACTTGAAGCTGTCAGGCCCTGGAGCGACTGATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467246.5
ENST00000478087.5
CDS GCA 72 bp CCCTCCGCGGGGAAGGCTGAATGTCGTCCTCTGCTGTaGTCTCGCTGGGGTAGAGGTCCTGAACCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: PSAGKAECRPLL*SRWGRGPEPGG
Trigger: TCCTCCTGGTTCAGGACCTCTACCCCAGCGAGAGCACAGCAGAGGACGACATTCAGCCTTCCCCGCGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000338546.9
ENST00000361490.9
CDS CCA 72 bp TGGAGGACAGGATGCAAAGGCAGACTGCGGCCACCTTaGCCTAGAGCAGGGGGATACGGGAGGCCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: WRTGCKGRLRPP*PRAGGYGRPPR
Trigger: TCTGGGAGGCCTCCCGTATCCCCCTGCTCTAGGCCAAGGTGGCCGCAGTCTGCCTTTGCATCCTGTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000467246.5
CDS GCA 72 bp AAGGAAGGAAAGGGCACAGCCGAGAAGCTCCGTGAGTaGCAGGGGCCTCTCCTAGTACCCGGGCACTGCCTT +
Preference number: 6 (lower is better)
Translates to: KEGKGTAEKLRE*QGPLLVPGHCL
Trigger: AAGGCAGTGCCCGGGTACTAGGAGAGGCCCCTGGCACTCACGGAGCTTCTCGGCTGTGCCCTTTCCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CCA 72 bp TGTGCCCCTCGATTCTTGACAAACTTGTCCATCCTCTaGCGCAGGTCTCCCACGAGGGGCTGGGAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: CAPRFLTNLSIL*RRSPTRGWERR
Trigger: CCTGCGCTCCCAGCCCCTCGTGGGAGACCTGCGCCAGAGGATGGACAAGTTTGTCAAGAATCGAGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
ENST00000497527.1
CDS CCA 72 bp CAGGGCCAGCAGCTCGTAGCACCTGACAGCCTCGGTTaGGCGGTTCTTGCTGTAGTAGCGCAGGAGCTTCCT +
Preference number: 6 (lower is better)
Translates to: QGQQLVAPDSLG*AVLAVVAQELP
Trigger: AGGAAGCTCCTGCGCTACTACAGCAAGAACCGCCCAACCGAGGCTGTCAGGTGCTACGAGCTGCTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000467246.5
CDS TCA 72 bp CCTTGCCCAACTCCGACGAGGTCTTTTGACTGCAGTTaGGGGAAGGCGCCACCATCTGCCCAGTGGTGCGGT +
Preference number: 6 (lower is better)
Translates to: PCPTPTRSFDCS*GKAPPSAQWCG
Trigger: ACCGCACCACTGGGCAGATGGTGGCGCCTTCCCTCAACTGCAGTCAAAAGACCTCGTCGGAGTTGGGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000467246.5
CDS GCA 72 bp GGAACAGCAGCGTGGTGTAGCCCTTCTGCAGGTATCTaGGCGCCAGCTGGATCAGAGACCAGACCTGGGGAA +
Preference number: 6 (lower is better)
Translates to: GTAAWCSPSAGI*APAGSETRPGE
Trigger: TTCCCCAGGTCTGGTCTCTGATCCAGCTGGCGCGCAGATACCTGCAGAAGGGCTACACCACGCTGCTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CCA 72 bp GGCACGGGGGTCCACTGGAGCCTAAGACAGATGTCCTaGGCTGCCTGTCGCTCGCAGCTAGCTATTGTTTCC +
Preference number: 6 (lower is better)
Translates to: GTGVHWSLRQMS*AACRSQLAIVS
Trigger: GGAAACAATAGCTAGCTGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCCGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS CCA 72 bp TGCTGGGGGCTGTGGTCAGAAAGTTCAGCCGGTAGATaGCGCAGAGCTGCCGCTTCAGCTTCCCACATGCCT +
Preference number: 6 (lower is better)
Translates to: CWGLWSESSAGR*RRAAASASHMP
Trigger: AGGCATGTGGGAAGCTGAAGCGGCAGCTCTGCGCCATCTACCGGCTGAACTTTCTGACCACAGCCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
CDS CCA 72 bp CAGCAAGCATCACCACTCTCCCAGCCTTGGTCTGCCTaGGCAGCTCTCACCTCCGAAGGAAGGAAAGGGCAC +
Preference number: 6 (lower is better)
Translates to: QQASPLSQPWSA*AALTSEGRKGH
Trigger: GTGCCCTTTCCTTCCTTCGGAGGTGAGAGCTGCCCAGGCAGACCAAGGCTGGGAGAGTGGTGATGCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS TCA 72 bp CCTGTAGTAGTCTCCTCCCAGCATGCCGATAGGCACTaGGTCGTCGGAGAGGACGGGCACCTCGATCATCTG +
Preference number: 6 (lower is better)
Translates to: PVVVSSQHADRH*VVGEDGHLDHL
Trigger: CAGATGATCGAGGTGCCCGTCCTCTCCGACGACTCAGTGCCTATCGGCATGCTGGGAGGAGACTACTACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000462743.1
ENST00000467246.5
CDS GCA 72 bp GGGGGTCCACTGGAGCCTAAGACAGATGTCCTGGGCTaGCTGTCGCTCGCAGCTAGCTATTGTTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: GGPLEPKTDVLG*LSLAASYCFLL
Trigger: CAGGAGGAAACAATAGCTAGCTGCGAGCGACAGGCAGCCCAGGACATCTGTCTTAGGCTCCAGTGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS CCA 72 bp AGCTTTCCTTCACGTTGGCATCCAGGAAGATCCTTCTaGGGCCGGAAGGCACAGGGCAGTGGGGAACCAGTG +
Preference number: 6 (lower is better)
Translates to: SFPSRWHPGRSF*GRKAQGSGEPV
Trigger: CACTGGTTCCCCACTGCCCTGTGCCTTCCGGCCCCAGAAGGATCTTCCTGGATGCCAACGTGAAGGAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000497527.1
CDS CCA 72 bp AGGAGCAGTAGAAATCCCCCTCCTGGAACAGCAGCGTaGTGTAGCCCTTCTGCAGGTATCTGCGCGCCAGCT +
Preference number: 6 (lower is better)
Translates to: RSSRNPPPGTAA*CSPSAGICAPA
Trigger: AGCTGGCGCGCAGATACCTGCAGAAGGGCTACACCACGCTGCTGTTCCAGGAGGGGGATTTCTACTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000462743.1
ENST00000467246.5
CDS CCA 72 bp GGGAAAAGACAGCAAGCATCACCACTCTCCCAGCCTTaGTCTGCCTGGGCAGCTCTCACCTCCGAAGGAAGG +
Preference number: 6 (lower is better)
Translates to: GKRQQASPLSQP*SAWAALTSEGR
Trigger: CCTTCCTTCGGAGGTGAGAGCTGCCCAGGCAGACCAAGGCTGGGAGAGTGGTGATGCTTGCTGTCTTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CAA 72 bp GCCTGGAGCAGCTCCCAGGAGGATCCGGGCTCACTTTaGGAGAAAGCCTTGGCCTTAAACTCCAGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: AWSSSQEDPGSL*EKALALNSSQV
Trigger: CACCTGGCTGGAGTTTAAGGCCAAGGCTTTCTCCAAAAGTGAGCCCGGATCCTCCTGGGAGCTGCTCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
CDS CAA 72 bp GGGGAAAAGACAGCAAGCATCACCACTCTCCCAGCCTaGGTCTGCCTGGGCAGCTCTCACCTCCGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: GEKTASITTLPA*VCLGSSHLRRK
Trigger: CTTCCTTCGGAGGTGAGAGCTGCCCAGGCAGACCAAGGCTGGGAGAGTGGTGATGCTTGCTGTCTTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS TCA 72 bp GCGCCACCATCTGCCCAGTGGTGCGGTCCACATAGATaGAGTGCACCAAGCCTGGGAAGTCTTCTAGGTAGG +
Preference number: 6 (lower is better)
Translates to: APPSAQWCGPHR*SAPSLGSLLGR
Trigger: CCTACCTAGAAGACTTCCCAGGCTTGGTGCACTTCATCTATGTGGACCGCACCACTGGGCAGATGGTGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000467246.5
CDS CCA 72 bp AGGTATCTGCGCGCCAGCTGGATCAGAGACCAGACCTaGGGAAAAGACAGCAAGCATCACCACTCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: RYLRASWIRDQT*GKDSKHHHSPS
Trigger: GCTGGGAGAGTGGTGATGCTTGCTGTCTTTTCCCCAGGTCTGGTCTCTGATCCAGCTGGCGCGCAGATACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CCA 72 bp GGGCCGGAAGGCACAGGGCAGTGGGGAACCAGTGTTTaGAGGGTGTCCTCTGCTATCTACAGAGGAAGAAGA +
Preference number: 6 (lower is better)
Translates to: GPEGTGQWGTSV*RVSSAIYRGRR
Trigger: TCTTCTTCCTCTGTAGATAGCAGAGGACACCCTCCAAACACTGGTTCCCCACTGCCCTGTGCCTTCCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497527.1
CDS TCA 72 bp GCTATTGTTTCCTCCTGCTTTCCTCCGGTCCTCACCTaGGCTCTGATCGCCAGGGGAAGGAGCTGGTGTGAA +
Preference number: 6 (lower is better)
Translates to: AIVSSCFPPVLT*ALIARGRSWCE
Trigger: TTCACACCAGCTCCTTCCCCTGGCGATCAGAGCTCAGGTGAGGACCGGAGGAAAGCAGGAGGAAACAATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338546.9
ENST00000414009.1
CDS TCA 72 bp GCCAGGTGCTCTGAATCTCCTGTGCCCCTCGATTCTTaGCAAACTTGTCCATCCTCTGGCGCAGGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: ARCSESPVPLDS*QTCPSSGAGLP
Trigger: TGGGAGACCTGCGCCAGAGGATGGACAAGTTTGTCAAGAATCGAGGGGCACAGGAGATTCAGAGCACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325103.10
ENST00000359632.7
ENST00000361490.9
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
ENST00000497527.1
CDS GCA 72 bp AGAAGCTGTCTGTCTCCTGAATGTCGTCCTCTGCTGTaGTCTCGCTGGGGTAGAGGTCCTGAACCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: RSCLSPECRPLL*SRWGRGPEPGG
Trigger: TCCTCCTGGTTCAGGACCTCTACCCCAGCGAGAGCACAGCAGAGGACGACATTCAGGAGACAGACAGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359632.7
ENST00000414009.1
ENST00000467246.5
ENST00000470095.5
ENST00000478087.5
ENST00000498219.5
CDS CCA 72 bp ACTGAGTCGTCGGAGAGGACGGGCACCTCGATCATCTaGAGTTTGTACCCCATGTCATTCTCGAACCACAGG +
Preference number: 6 (lower is better)
Translates to: TESSERTGTSII*SLYPMSFSNHR
Trigger: CCTGTGGTTCGAGAATGACATGGGGTACAAACTCCAGATGATCGAGGTGCCCGTCCTCTCCGACGACTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325103.10
ENST00000361490.9
ENST00000462743.1
ENST00000467246.5
CDS CCA 72 bp GTGCCAGGGGCCTCTCCTAGTACCCGGGCACTGCCTTaGCTCAGAGCAGGAGGCTCAACAATAAATCATTAT +
Preference number: 6 (lower is better)
Translates to: VPGASPSTRALP*LRAGGSTINHY
Trigger: ATAATGATTTATTGTTGAGCCTCCTGCTCTGAGCCAAGGCAGTGCCCGGGTACTAGGAGAGGCCCCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CAA 72 bp GGTCTCAAATCCCTGAGCTCAAGCAACTGGCCCACCTaGGCTTCCCAAAGTGTTGTGATTACAGGCGTGAGC +
Preference number: 6 (lower is better)
Translates to: GLKSLSSSNWPT*ASQSVVITGVS
Trigger: GCTCACGCCTGTAATCACAACACTTTGGGAAGCCAAGGTGGGCCAGTTGCTTGAGCTCAGGGATTTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465957.1
CDS CAA 72 bp TTGGCTCAGAGCAGGAGGCTCAACAATAAATCATTATaGGATGGATGGACTACCCTCCAGTTAGCGTGGGGG +
Preference number: 6 (lower is better)
Translates to: LAQSRRLNNKSL*DGWTTLQLAWG
Trigger: CCCCCACGCTAACTGGAGGGTAGTCCATCCATCCAATAATGATTTATTGTTGAGCCTCCTGCTCTGAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462743.1
CDS CAA 72 bp AAGTTCTTCTGTTACGTGATAAAATTCGACTTCTTCTaGCCCTCATTTAGTCCAGAGAGGACTGGTGGGGTG +
Preference number: 6 (lower is better)
Translates to: KFFCYVIKFDFF*PSFSPERTGGV
Trigger: CACCCCACCAGTCCTCTCTGGACTAAATGAGGGCAAGAAGAAGTCGAATTTTATCACGTAACAGAAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465957.1