Pregenerated sensors for HPR (Homo sapiens)
Ensembl gene IDs: ENSG00000261701Ensembl transcript IDs: ENST00000649683.1
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGGTGATCAAAGACCCTTTCCCGGAGGACAATGTTTTCCCTGTATaGGCCACCAAATTTGTTGGAAACAAATGCTCGGTGCTCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: EVIKDPFPEDNVFPV*ATKFVGNKCSVLIL Trigger: CAAGATGAGCACCGAGCATTTGTTTCCAACAAATTTGGTGGCCCATACAGGGAAAACATTGTCCTCCGGGAAAGGGTCTTTGATCACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649683.1 |
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| CDS CAA 90 bp | ACCCTTTCCCGGAGGACAATGTTTTCCCTGTATGGGCCACCAAATTaGTTGGAAACAAATGCTCGGTGCTCATCTTGGTTGGTCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TLSRRTMFSLYGPPN*LETNARCSSWLVLP Trigger: AGGCAAGACCAACCAAGATGAGCACCGAGCATTTGTTTCCAACAAATTTGGTGGCCCATACAGGGAAAACATTGTCCTCCGGGAAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649683.1 |
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| CDS CCA 72 bp | AAAGACCCTTTCCCGGAGGACAATGTTTTCCCTGTATaGGCCACCAAATTTGTTGGAAACAAATGCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: KDPFPEDNVFPV*ATKFVGNKCSV Trigger: CACCGAGCATTTGTTTCCAACAAATTTGGTGGCCCATACAGGGAAAACATTGTCCTCCGGGAAAGGGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649683.1 |
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| CDS CAA 72 bp | CGGAGGACAATGTTTTCCCTGTATGGGCCACCAAATTaGTTGGAAACAAATGCTCGGTGCTCATCTTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRTMFSLYGPPN*LETNARCSSWL Trigger: CAACCAAGATGAGCACCGAGCATTTGTTTCCAACAAATTTGGTGGCCCATACAGGGAAAACATTGTCCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649683.1 |
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| CDS CCA 72 bp | GGACAATGTTTTCCCTGTATGGGCCACCAAATTTGTTaGAAACAAATGCTCGGTGCTCATCTTGGTTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GQCFPCMGHQIC*KQMLGAHLGWS Trigger: AGACCAACCAAGATGAGCACCGAGCATTTGTTTCCAACAAATTTGGTGGCCCATACAGGGAAAACATTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649683.1 |
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| CDS CAA 72 bp | AGGACAATGTTTTCCCTGTATGGGCCACCAAATTTGTaGGAAACAAATGCTCGGTGCTCATCTTGGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RTMFSLYGPPNL*ETNARCSSWLV Trigger: GACCAACCAAGATGAGCACCGAGCATTTGTTTCCAACAAATTTGGTGGCCCATACAGGGAAAACATTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649683.1 |
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