Pregenerated sensors for HPGDS (Homo sapiens)
Ensembl gene IDs: ENSG00000163106Ensembl transcript IDs: ENST00000295256.10, ENST00000506331.1, ENST00000514774.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGGGGAAGAATGGTGTTGCTAAACCATTATGACTGCAATTCGTaGATGTTAGAACCTGTGCAAAGCAAGGTCTGCCTGTATTACATA | + |
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Preference number: 1 (lower is better) Translates to: GRGRMVLLNHYDCNS*MLEPVQSKVCLYYI Trigger: TATGTAATACAGGCAGACCTTGCTTTGCACAGGTTCTAACATGCACGAATTGCAGTCATAATGGTTTAGCAACACCATTCTTCCCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR CCA 90 bp | TATTTTCTCCAAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTaGGGTATCTACATTTTTCTCATCACAACAACTTTATTCATGTCA | + |
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Preference number: 1 (lower is better) Translates to: YFLQVCGLSSPSLDL*GIYIFLITTTLFMS Trigger: TGACATGAATAAAGTTGTTGTGATGAGAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTTGGAGAAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR TCA 90 bp | ATTCCCACAGTCAGCTCTTTTCTCGATAACTCTTTATATTCAGTTTaGATTTCATTCCAGGATTATCAGTTTTTGTTCCTTTGCTGCACT | + |
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Preference number: 1 (lower is better) Translates to: IPTVSSFLDNSLYSV*ISFQDYQFLFLCCT Trigger: AGTGCAGCAAAGGAACAAAAACTGATAATCCTGGAATGAAATTCAAACTGAATATAAAGAGTTATCGAGAAAAGAGCTGACTGTGGGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR-3UTR CCA 90 bp | GGCAATAGCAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGTGGGGAGGGAGCATGTaGATTATCTGGCAGGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: GNSNTTTHFAIYAGITDVWGGSM*IIWQAD Trigger: ATCAGCCTGCCAGATAATCCACATGCTCCCTCCCCA...CACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTGCTATTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCTCTGGCAGTCTTGGTAATTGTGGTAGCTaGAGTCCAAAACATTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: TLCYLCRNNRCAVTSGSLGNCGS*SPKHFG Trigger: CCCAAAATGTTTTGGACTTCAGCTACCACAATTACC...AAGACTGCCAGAGGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR-3UTR CCA 90 bp | AATTCATCTTTACAAGTTTCTCTGGCTGCATATCTAGAGCCTTTTGAGCCGTGTAGCATGTGGATTATCTaGCAGGCTGATGTAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: NSSLQVSLAAYLEPFEPCSMWII*QADVAV Trigger: GACAGCTACATCAGCCTGCCAGATAATCCACATGCT...ACACGGCTCAAAAGGCTCTAGATATGCAGCCAGAGAAACTTGTAAAGATGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCGTGCAAAGCAAGGTCTaGCTGTATTACATACTATTT | + |
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Preference number: 2 (lower is better) Translates to: KSVACLLLLLISGVSTFFVQSKV*LYYILF Trigger: AAATAGTATGTAATACAGGCAGACCTTGCTTTGCAC...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR-3UTR CCA 90 bp | GGCAATAGCAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGCGATATGTGAACTaGAGAGCTACTAGCAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: GNSNTTTHFAIYAGITDVQRYVN*RATSKV Trigger: AACTTTGCTAGTAGCTCTCCAGTTCACATATCGCTG...CACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTGCTATTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR TCA 72 bp | TTGGGGGAGGGGAAGAATGGTGTTGCTAAACCATTATaGCTGCAATTCGTGCATGTTAGAACCTGTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: LGEGKNGVAKPL*LQFVHVRTCAK Trigger: CTTTGCACAGGTTCTAACATGCACGAATTGCAGTCATAATGGTTTAGCAACACCATTCTTCCCCTCCCCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR TCA 72 bp | CACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTaGCCTCTGGCAGTCTTTGATAGAAGTGACTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: HFAIYAGITDVQ*PLAVFDRSDWS Trigger: TGACCAGTCACTTCTATCAAAGACTGCCAGAGGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR GCA 72 bp | AGAATGGTGTTGCTAAACCATTATGACTGCAATTCGTaGATGTTAGAACCTGTGCAAAGCAAGGTCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: RMVLLNHYDCNS*MLEPVQSKVCL Trigger: CAGGCAGACCTTGCTTTGCACAGGTTCTAACATGCACGAATTGCAGTCATAATGGTTTAGCAACACCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR CCA 72 bp | CAAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTaGGGTATCTACATTTTTCTCATCACAACAACTTTA | + |
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Preference number: 3 (lower is better) Translates to: QVCGLSSPSLDL*GIYIFLITTTL Trigger: TAAAGTTGTTGTGATGAGAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| 3UTR CCA 72 bp | GATGTACATAGGTTATTTACACAGCGATATGTGAACTaGAGAGCTACTAGCAAAGTTTGTGTTTTATGCAAT | + |
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Preference number: 3 (lower is better) Translates to: DVHRLFTQRYVN*RATSKVCVLCN Trigger: ATTGCATAAAACACAAACTTTGCTAGTAGCTCTCCAGTTCACATATCGCTGTGTAAATAACCTATGTACATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | ACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCTCTGGCAGTCTTTGGGGAGGGAGCATGTaGATTATCTGGCAGGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: TLCYLCRNNRCAVTSGSLWGGSM*IIWQAD Trigger: ATCAGCCTGCCAGATAATCCACATGCTCCCTCCCCA...AAGACTGCCAGAGGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | ACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCTCTGGCAGTCTTCTCCCAGTAGAAGTCTaGCCAAGTTACAGAGTTACC | + |
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Preference number: 4 (lower is better) Translates to: TLCYLCRNNRCAVTSGSLLPVEV*PSYRVT Trigger: GGTAACTCTGTAACTTGGGCAGACTTCTACTGGGAG...AAGACTGCCAGAGGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCACGGCAGGAATGGCTTaGACTTTCTTCCGTAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFTAGMA*TFFRKV Trigger: GACTTTACGGAAGAAAGTCCAAGCCATTCCTGCCGT...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | ACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCTCTGGCAGTCTTGGATCAGCTAGAGTTTaGTTTGGGGCCTTCGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: TLCYLCRNNRCAVTSGSLGSARV*FGAFVL Trigger: TAAAACGAAGGCCCCAAACCAAACTCTAGCTGATCC...AAGACTGCCAGAGGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCAGCATGTGGATTATCTaGCAGGCTGATGTAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFSMWII*QADVAV Trigger: GACAGCTACATCAGCCTGCCAGATAATCCACATGCT...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | ACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCTCTGGCAGTCTTTTTTCTCCAAGTCTGTaGCTTGTCTTCTCCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TLCYLCRNNRCAVTSGSLFSPSL*LVFSFS Trigger: AGAGAAGGAGAAGACAAGCCACAGACTTGGAGAAAA...AAGACTGCCAGAGGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR TCA 90 bp | CAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCATGGGAGAGTTGATTTaGTTTCAGGCCAGTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QYNYTLCYLCRNNRCAVTMGELI*FQASQL Trigger: AAGCTGACTGGCCTGAAATCAAATCAACTCTCCCAT...GGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR TCA 90 bp | AATTCATCTTTACAAGTTTCTCTGGCTGCATATCTAGAGCCTTTTGAGCCGTGTATTGCTAGGCTCTGGTaGAGAGTAAGTCCATCAACT | + |
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Preference number: 4 (lower is better) Translates to: NSSLQVSLAAYLEPFEPCIARLW*RVSPST Trigger: AGTTGATGGACTTACTCTTCACCAGAGCCTAGCAAT...ACACGGCTCAAAAGGCTCTAGATATGCAGCCAGAGAAACTTGTAAAGATGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR TCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCTGCCCAAGGAAAACATaGCATGAAATCATCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFCPRKT*HEIIQS Trigger: ACTCTGGATGATTTCATGTCATGTTTTCCTTGGGCA...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR TCA 90 bp | CTAAACCATTATGACTGCAATTCGTGCATGTTAGAACCTGTGCAAAGCAAGGTCGGTAATTGTGGTAGCTaGAGTCCAAAACATTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LNHYDCNSCMLEPVQSKVGNCGS*SPKHFG Trigger: CCCAAAATGTTTTGGACTTCAGCTACCACAATTACC...GACCTTGCTTTGCACAGGTTCTAACATGCACGAATTGCAGTCATAATGGTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | CTAAACCATTATGACTGCAATTCGTGCATGTTAGAACCTGTGCAAAGCAAGGTCCCAAAAGTGTGGTACTaGAAATCTCCCAGTAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LNHYDCNSCMLEPVQSKVPKVWY*KSPSRS Trigger: ACTTCTACTGGGAGATTTGCAGTACCACACTTTTGG...GACCTTGCTTTGCACAGGTTCTAACATGCACGAATTGCAGTCATAATGGTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | CTAAACCATTATGACTGCAATTCGTGCATGTTAGAACCTGTGCAAAGCAAGGTCCAGCGATATGTGAACTaGAGAGCTACTAGCAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: LNHYDCNSCMLEPVQSKVQRYVN*RATSKV Trigger: AACTTTGCTAGTAGCTCTCCAGTTCACATATCGCTG...GACCTTGCTTTGCACAGGTTCTAACATGCACGAATTGCAGTCATAATGGTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR TCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCAAGGAAAACATGACATaGAATCATCCAGAGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFKENMT*NHPECP Trigger: TGGACACTCTGGATGATTTCATGTCATGTTTTCCTT...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR TCA 90 bp | GGCAATAGCAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGAAGTCTTGCATAAGATaGGGCGCATTATACGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GNSNTTTHFAIYAGITDVKSCIR*GALYVS Trigger: GCTCACGTATAATGCGCCTCATCTTATGCAAGACTT...CACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTGCTATTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCTGTAGTTTGGCATGGTaGAATTCTGTGTTATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFCSLAW*NSVLCL Trigger: GAGACATAACACAGAATTGCACCATGCCAAACTACA...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCGCTTGTTCTATTCTGTaGTCTTCATACTGTATGTCC | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFACSIL*SSYCMS Trigger: GGACATACAGTATGAAGACCACAGAATAGAACAAGC...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCCCTTCTCTTGATCTCTaGGGTATCTACATTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFPSLDL*GIYIFL Trigger: GAGAAAAATGTAGATACCCCAGAGATCAAGAGAAGG...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCAGCTCATTGAACATCTaGTCTTTCACATCTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFSSLNI*SFTSCF Trigger: AAAGCAAGATGTGAAAGAGCAGATGTTCAATGAGCT...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | GTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCTCATCAGTTTGTAGTTTGGCATaGTGCAATTCTGTGTTATGT | + |
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Preference number: 4 (lower is better) Translates to: VACLLLLLISGVSTFFSSVCSLA*CNSVLC Trigger: ACATAACACAGAATTGCACCATGCCAAACTACAAAC...TGATGAGAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | ACTGGAGAGCTACTAGCAAAGTTTGTGTTTTATGCAATTACAGGTAATTGTGGTATGTGCAGTGACCTCTaGCAGTCTTTGATAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: TGELLAKFVFYAITGNCGMCSDL*QSLIEV Trigger: CACTTCTATCAAAGACTGCCAGAGGTCACTGCACAT...ACCACAATTACCTGTAATTGCATAAAACACAAACTTTGCTAGTAGCTCTCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR TCA 90 bp | CAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCACAATAGCATCAACATaGCATTGTTCCATTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: QYNYTLCYLCRNNRCAVTTIAST*HCSISV Trigger: CACAGAAATGGAACAATGTCATGTTGATGCTATTGT...GGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | ACTGGAGAGCTACTAGCAAAGTTTGTGTTTTATGCAATTACAGGTAATTGTGGTTGCTCTTTCACATCTTaGTTTTTCTCTGCCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: TGELLAKFVFYAITGNCGCSFTS*FFSAQG Trigger: TCCTTGGGCAGAGAAAAAGCAAGATGTGAAAGAGCA...ACCACAATTACCTGTAATTGCATAAAACACAAACTTTGCTAGTAGCTCTCCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | AATTCATCTTTACAAGTTTCTCTGGCTGCATATCTAGAGCCTTTTGAGCCGTGTGTGCAAAGCAAGGTCTaGCTGTATTACATACTATTT | + |
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Preference number: 4 (lower is better) Translates to: NSSLQVSLAAYLEPFEPCVQSKV*LYYILF Trigger: AAATAGTATGTAATACAGGCAGACCTTGCTTTGCAC...ACACGGCTCAAAAGGCTCTAGATATGCAGCCAGAGAAACTTGTAAAGATGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCTACAACTACACACTTTaGTATCTATGCAGGAATAAC | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFYNYTL*YLCRNN Trigger: GTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTA...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | AAGTCTGTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCCAGTTTTTGTTCCTTTaGTGCACTTTCATCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: KSVACLLLLLISGVSTFFQFLFL*CTFIFV Trigger: AACAAAGATGAAAGTGCAGCAAAGGAACAAAAACTG...GAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | AATTCATCTTTACAAGTTTCTCTGGCTGCATATCTAGAGCCTTTTGAGCCGTGTGTAACGAATAATTTCTaGTCTCCCCCTCATATTAAA | + |
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Preference number: 4 (lower is better) Translates to: NSSLQVSLAAYLEPFEPCVTNNF*SPPHIK Trigger: TTTAATATGAGGGGGAGAGCAGAAATTATTCGTTAC...ACACGGCTCAAAAGGCTCTAGATATGCAGCCAGAGAAACTTGTAAAGATGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | ACTGGAGAGCTACTAGCAAAGTTTGTGTTTTATGCAATTACAGGTAATTGTGGTAGTGAGTTTGTAGTTTaGCATGGTGCAATTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TGELLAKFVFYAITGNCGSEFVV*HGAILC Trigger: ACACAGAATTGCACCATGCCAAACTACAAACTCACT...ACCACAATTACCTGTAATTGCATAAAACACAAACTTTGCTAGTAGCTCTCCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CCA 90 bp | GGCAATAGCAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGCATCAACTTCCAAAATaGGGATTTTTCCAAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: GNSNTTTHFAIYAGITDVHQLPK*GFFQMG Trigger: TCCCATTTGGAAAAATCCCCATTTTGGAAGTTGATG...CACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTGCTATTGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR GCA 90 bp | ACTGGAGAGCTACTAGCAAAGTTTGTGTTTTATGCAATTACAGGTAATTGTGGTTTTTTGTTCCTTTGCTaGACTTTCATCTTTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: TGELLAKFVFYAITGNCGFLFLC*TFIFVG Trigger: CCCAACAAAGATGAAAGTGCAGCAAAGGAACAAAAA...ACCACAATTACCTGTAATTGCATAAAACACAAACTTTGCTAGTAGCTCTCCAGT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS CCA 90 bp | GTTTGGGGCCTTCGTTTTATCCAGTTAGCGACGGCAGGAATGGCTTaGACTTTCTTCCGTAAAGTCACCAGCCTTGGATGGTTGTCTAAC | + |
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Preference number: 5 (lower is better) Translates to: VWGLRFIQLATAGMA*TFFRKVTSLGWLSN Trigger: GTTAGACAACCATCCAAGGCTGGTGACTTTACGGAAGAAAGTCCAAGCCATTCCTGCCGTCGCTAACTGGATAAAACGAAGGCCCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | CAGGCTGATGTAGCTGTCTTATCTGATGAGAGAGATGCCCCCGAGAAAAACAAACTCCAAGTCTGTGGCTaGTCTTCTCCTTCTCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: QADVAVLSDERDAPEKNKLQVCG*SSPSLD Trigger: ATCAAGAGAAGGAGAAGACAAGCCACAGACTTGGAG...TTTGTTTTTCTCGGGGGCATCTCTCTCATCAGATAAGACAGCTACATCAGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | GTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCTCATCAGTAAAGTCACCAGCCTaGGATGGTTGTCTAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: VACLLLLLISGVSTFFSSVKSPA*DGCLTG Trigger: ACCTGTTAGACAACCATCCAAGGCTGGTGACTTTAC...TGATGAGAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | ACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCTCTGGCAGTCTTTCAAATATCTTGCTATaGCTAGGCTCTGGTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: TLCYLCRNNRCAVTSGSLSNILL*LGSGEE Trigger: CTCTTCACCAGAGCCTAGCAATAGCAAGATATTTGA...AAGACTGCCAGAGGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | CTAAACCATTATGACTGCAATTCGTGCATGTTAGAACCTGTGCAAAGCAAGGTCTACGTGAGCAGCTCATaGAACATCTGCTCTTTCACA | + |
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Preference number: 5 (lower is better) Translates to: LNHYDCNSCMLEPVQSKVYVSSS*NICSFT Trigger: TGTGAAAGAGCAGATGTTCAATGAGCTGCTCACGTA...GACCTTGCTTTGCACAGGTTCTAACATGCACGAATTGCAGTCATAATGGTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | GGCAATAGCAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGACCAGCCTTGGATGGTaGTCTAACAGGTCAGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: GNSNTTTHFAIYAGITDVTSLGW*SNRSGL Trigger: TAAGCCTGACCTGTTAGACAACCATCCAAGGCTGGT...CACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTGCTATTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | CAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCCAGCTAGAGTTTGGTTaGGGGCCTTCGTTTTATCCA | + |
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Preference number: 5 (lower is better) Translates to: QYNYTLCYLCRNNRCAVTQLEFG*GPSFYP Trigger: TGGATAAAACGAAGGCCCCAAACCAAACTCTAGCTG...GGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | GTGGCTTGTCTTCTCCTTCTCTTGATCTCTGGGGTATCTACATTTTTCTCATCAATATGTGTCCAAGTCTaGCATAAGATGAGGCGCATT | + |
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Preference number: 5 (lower is better) Translates to: VACLLLLLISGVSTFFSSICVQV*HKMRRI Trigger: AATGCGCCTCATCTTATGCAAGACTTGGACACATAT...TGATGAGAAAAATGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | AATTCATCTTTACAAGTTTCTCTGGCTGCATATCTAGAGCCTTTTGAGCCGTGTCCGAGAAAAACAAACTaGAAGGCAACATGGATCAGC | + |
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Preference number: 5 (lower is better) Translates to: NSSLQVSLAAYLEPFEPCPRKTN*KATWIS Trigger: GCTGATCCATGTTGCCTTCAAGTTTGTTTTTCTCGG...ACACGGCTCAAAAGGCTCTAGATATGCAGCCAGAGAAACTTGTAAAGATGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | CAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCAGGGGAAGAATGGTGTaGCTAAACCATTATGACTGC | + |
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Preference number: 5 (lower is better) Translates to: QYNYTLCYLCRNNRCAVTRGRMV*LNHYDC Trigger: GCAGTCATAATGGTTTAGCAACACCATTCTTCCCCT...GGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | CTAAACCATTATGACTGCAATTCGTGCATGTTAGAACCTGTGCAAAGCAAGGTCAGCATCAACATGACATaGTTCCATTTCTGTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: LNHYDCNSCMLEPVQSKVSINMT*FHFCVS Trigger: GGAAACACAGAAATGGAACAATGTCATGTTGATGCT...GACCTTGCTTTGCACAGGTTCTAACATGCACGAATTGCAGTCATAATGGTTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | ACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCTCTGGCAGTCTTTCAGTTTTTGTTCCTTaGCTGCACTTTCATCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: TLCYLCRNNRCAVTSGSLSVFVP*LHFHLC Trigger: ACAAAGATGAAAGTGCAGCAAAGGAACAAAAACTGA...AAGACTGCCAGAGGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | ACTGGAGAGCTACTAGCAAAGTTTGTGTTTTATGCAATTACAGGTAATTGTGGTAATGGGAGAGTTGATTaGATTTCAGGCCAGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TGELLAKFVFYAITGNCGNGRVD*ISGQSA Trigger: AGCTGACTGGCCTGAAATCAAATCAACTCTCCCATT...ACCACAATTACCTGTAATTGCATAAAACACAAACTTTGCTAGTAGCTCTCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | CAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCTTTTGGTCAAATATCTaGCTATTGCTAGGCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: QYNYTLCYLCRNNRCAVTFWSNI*LLLGSG Trigger: ACCAGAGCCTAGCAATAGCAAGATATTTGACCAAAA...GGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | CAATACAACTACACACTTTGCTATCTATGCAGGAATAACAGATGTGCAGTGACCCAGGATTATCAGTTTTaGTTCCTTTGCTGCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: QYNYTLCYLCRNNRCAVTQDYQF*FLCCTF Trigger: GAAAGTGCAGCAAAGGAACAAAAACTGATAATCCTG...GGTCACTGCACATCTGTTATTCCTGCATAGATAGCAAAGTGTGTAGTTGTATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS-3UTR CAA 90 bp | ACTGGAGAGCTACTAGCAAAGTTTGTGTTTTATGCAATTACAGGTAATTGTGGTTGTCTTCTCCTTCTCTaGATCTCTGGGGTATCTACA | + |
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Preference number: 5 (lower is better) Translates to: TGELLAKFVFYAITGNCGCLLLL*ISGVST Trigger: TGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACA...ACCACAATTACCTGTAATTGCATAAAACACAAACTTTGCTAGTAGCTCTCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS GCA 90 bp | CCTGGCAAATTCTGTTCTTCTAACGTGCATTTCCAGAGCTTCAGGTaGACCAATGTTTGTGTATATGCAGAGTCAAATAAAACTCTTATA | + |
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Preference number: 5 (lower is better) Translates to: PGKFCSSNVHFQSFR*TNVCVYAESNKTLI Trigger: TATAAGAGTTTTATTTGACTCTGCATATACACAAACATTGGTGCACCTGAAGCTCTGGAAATGCACGTTAGAAGAACAGAATTTGCCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514774.1 |
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| CDS TCA 90 bp | AAACATGACATGAAATCATCCAGAGTGTCCACAATAGCATCAACATaGCATTGTTCCATTTCTGTGTTTCCAGCCAAATCTGTGTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: KHDMKSSRVSTIAST*HCSISVFPAKSVFL Trigger: CAAAAACACAGATTTGGCTGGAAACACAGAAATGGAACAATGTCATGTTGATGCTATTGTGGACACTCTGGATGATTTCATGTCATGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000295256.10 ENST00000514774.1 |
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| CDS GCA 72 bp | GCATGGTGCAATTCTGTGTTATGTCTCTCGGGAGTCTaGAGTGTCTTGTATCCCTGGGTATGTGACTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: AWCNSVLCLSGV*SVLYPWVCDCA Trigger: GGCACAGTCACATACCCAGGGATACAAGACACTGCAGACTCCCGAGAGACATAACACAGAATTGCACCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506331.1 ENST00000514774.1 |
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| CDS CCA 72 bp | CTTCGTTTTATCCAGTTAGCGACGGCAGGAATGGCTTaGACTTTCTTCCGTAAAGTCACCAGCCTTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: LRFIQLATAGMA*TFFRKVTSLGW Trigger: CCATCCAAGGCTGGTGACTTTACGGAAGAAAGTCCAAGCCATTCCTGCCGTCGCTAACTGGATAAAACGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS CAA 72 bp | AAACTTGAAGGCAACATGGATCAGCTAGAGTTTGGTTaGGGGCCTTCGTTTTATCCAGTTAGCGACGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KLEGNMDQLEFG*GPSFYPVSDGR Trigger: CCTGCCGTCGCTAACTGGATAAAACGAAGGCCCCAAACCAAACTCTAGCTGATCCATGTTGCCTTCAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295256.10 |
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| CDS CCA 72 bp | TCTCCCCCTCATATTAAAATAAGTGAGTTTGTAGTTTaGCATGGTGCAATTCTGTGTTATGTCTCTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SPPHIKISEFVV*HGAILCYVSRE Trigger: CTCCCGAGAGACATAACACAGAATTGCACCATGCCAAACTACAAACTCACTTATTTTAATATGAGGGGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000295256.10 ENST00000506331.1 ENST00000514774.1 |
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| CDS CAA 72 bp | ATCATCCAGAGTGTCCACAATAGCATCAACATGACATaGTTCCATTTCTGTGTTTCCAGCCAAATCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: IIQSVHNSINMT*FHFCVSSQICV Trigger: AACACAGATTTGGCTGGAAACACAGAAATGGAACAATGTCATGTTGATGCTATTGTGGACACTCTGGATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295256.10 ENST00000514774.1 |
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