Pregenerated sensors for HPDL (Homo sapiens)
Ensembl gene IDs: ENSG00000186603Ensembl transcript IDs: ENST00000334815.5, ENST00000334815.6
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACAGCGGGACACAGGGAGGACTCGAAAGTATTGGTTATGTTCTATTTCCTAGTGTCCTCAGTTCTGTGCTaGTCTCCCCAGAGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TAGHREDSKVLVMFYFLVSSVLC*SPQSCR Trigger: CCTGCAGCTCTGGGGAGACCAGCACAGAACTGAGGA...CACTAGGAAATAGAACATAACCAATACTTTCGAGTCCTCCCTGTGTCCCGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR-3UTR TCA 90 bp | CAGAAAAGCAAAGGGCTAATAATGACAGGATTTGAGGAGTGGGTGGGAGGAAATCTCTTTGGAGCCCAATaGGAGACACAGCTTCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: QKSKGLIMTGFEEWVGGNLFGAQ*ETQLLA Trigger: TGCCAGAAGCTGTGTCTCTCATTGGGCTCCAAAGAG...ATTTCCTCCCACCCACTCCTCAAATCCTGTCATTATTAGCCCTTTGCTTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR-3UTR GCA 90 bp | GAAACAATACAGAAAAGCAAAGGGCTAATAATGACAGGATTTGAGGAGTGGGTGAATGGAAGTCACACCTaGCCCCCGGAGGCAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: ETIQKSKGLIMTGFEEWVNGSHT*PPEAKP Trigger: AGGCTTTGCCTCCGGGGGGCAGGTGTGACTTCCATT...CACCCACTCCTCAAATCCTGTCATTATTAGCCCTTTGCTTTTCTGTATTGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAAGCAAAGGGCTAATAATGACAGGATTTGAGGAGTGGGTGGGAGGAAATGAGAGACACAGCTTCTaGCAGGCACTGATGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: QKSKGLIMTGFEEWVGGNERHSF*QALMKW Trigger: CCATTTCATCAGTGCCTGCCAGAAGCTGTGTCTCTC...ATTTCCTCCCACCCACTCCTCAAATCCTGTCATTATTAGCCCTTTGCTTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTACATACGGAGTGAAACAATACAGAAAAGCAAAGGGCTAATAATGACAGGAAAGCCTTTCACTAGTTaGGCCTCCTGCAGATGTTCC | + |
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Preference number: 2 (lower is better) Translates to: CYIRSETIQKSKGLIMTGKPFTS*ASCRCS Trigger: GGAACATCTGCAGGAGGCCCAACTAGTGAAAGGCTT...TCCTGTCATTATTAGCCCTTTGCTTTTCTGTATTGTTTCACTCCGTATGTAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR CAA 90 bp | GGAGGAAATAGAATCACAGCGGGACACAGGGAGGACTCGAAAGTATaGGTTATGTTCTATTTCCTAGTGTGTAATTCTTTTATTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GGNRITAGHREDSKV*VMFYFLVCNSFIVL Trigger: AAGAACAATAAAAGAATTACACACTAGGAAATAGAACATAACCAATACTTTCGAGTCCTCCCTGTGTCCCGCTGTGATTCTATTTCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR GCA 72 bp | ACTAGTTGGGCCTCCTGCAGATGTTCCTCAGTTCTGTaGTGGTCTCCCCAGAGCTGCAGGACAGCTGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TSWASCRCSSVL*WSPQSCRTAGC Trigger: GCAGCCAGCTGTCCTGCAGCTCTGGGGAGACCAGCACAGAACTGAGGAACATCTGCAGGAGGCCCAACTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR GCA 72 bp | CCCCCGGAGGCAAAGCCTTTCACTAGTTGGGCCTCCTaGAGATGTTCCTCAGTTCTGTGCTGGTCTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: PPEAKPFTSWAS*RCSSVLCWSPQ Trigger: CTGGGGAGACCAGCACAGAACTGAGGAACATCTGCAGGAGGCCCAACTAGTGAAAGGCTTTGCCTCCGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR CCA 72 bp | CCCACCTCTTTGGAGCCCAATGAGAGACACAGCTTCTaGCAGGCACTGATGAAATGGAAGTCACACCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: PTSLEPNERHSF*QALMKWKSHLP Trigger: GGGCAGGTGTGACTTCCATTTCATCAGTGCCTGCCAGAAGCTGTGTCTCTCATTGGGCTCCAAAGAGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR-3UTR CAA 90 bp | CAGAAAAGCAAAGGGCTAATAATGACAGGATTTGAGGAGTGGGTGGGAGGAAATAAAAATCCCACCTCTTaGGAGCCCAATGAGAGACAC | + |
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Preference number: 3 (lower is better) Translates to: QKSKGLIMTGFEEWVGGNKNPTS*EPNERH Trigger: GTGTCTCTCATTGGGCTCCAAAGAGGTGGGATTTTT...ATTTCCTCCCACCCACTCCTCAAATCCTGTCATTATTAGCCCTTTGCTTTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| 3UTR CAA 72 bp | AGAATCACAGCGGGACACAGGGAGGACTCGAAAGTATaGGTTATGTTCTATTTCCTAGTGTGTAATTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: RITAGHREDSKV*VMFYFLVCNSF Trigger: AAAAGAATTACACACTAGGAAATAGAACATAACCAATACTTTCGAGTCCTCCCTGTGTCCCGCTGTGATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.5 |
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| CDS CCA 90 bp | AGGTTCCGGGCTAGGGGCTGCCCGGCGGGCACGTGGAAGGCGATGTaGCACAAACGAAGGGCGGGCGCGGCCATGGCGCTCTGGACGGCG | + |
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Preference number: 5 (lower is better) Translates to: RFRARGCPAGTWKAM*HKRRAGAAMALWTA Trigger: CGCCGTCCAGAGCGCCATGGCCGCGCCCGCCCTTCGTTTGTGCCACATCGCCTTCCACGTGCCCGCCGGGCAGCCCCTAGCCCGGAACCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | AGGGCTAGCTGCCGCCAGCCGTCCACCTCCCGCGAAGCCAGGGGCTaGAAGCCGAAGAGGCGCTGCAGGTTCCGGGCTAGGGGCTGCCCG | + |
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Preference number: 5 (lower is better) Translates to: RASCRQPSTSREARG*KPKRRCRFRARGCP Trigger: CGGGCAGCCCCTAGCCCGGAACCTGCAGCGCCTCTTCGGCTTCCAGCCCCTGGCTTCGCGGGAGGTGGACGGCTGGCGGCAGCTAGCCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 90 bp | GGGAGGGACAGGCACGCTGCAGCCCAGCGCTGCCAGCTCCCGGGTTaGAGCGCCGGCGTCCGCCACGTCGAAGCACAGGTTTGTGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: GRDRHAAAQRCQLPG*SAGVRHVEAQVCGA Trigger: AGCGCCACAAACCTGTGCTTCGACGTGGCGGACGCCGGCGCTGCAACCCGGGAGCTGGCAGCGCTGGGCTGCAGCGTGCCTGTCCCTCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | AAGAGGCGCTGCAGGTTCCGGGCTAGGGGCTGCCCGGCGGGCACGTaGAAGGCGATGTGGCACAAACGAAGGGCGGGCGCGGCCATGGCG | + |
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Preference number: 5 (lower is better) Translates to: KRRCRFRARGCPAGT*KAMWHKRRAGAAMA Trigger: CGCCATGGCCGCGCCCGCCCTTCGTTTGTGCCACATCGCCTTCCACGTGCCCGCCGGGCAGCCCCTAGCCCGGAACCTGCAGCGCCTCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | CCCGGGTTGCAGCGCCGGCGTCCGCCACGTCGAAGCACAGGTTTGTaGCGCTGGGCACGGCGTGACGCGGATCCAGGCCGTACAGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: PGLQRRRPPRRSTGL*RWARRDADPGRTAA Trigger: AGCCGCTGTACGGCCTGGATCCGCGTCACGCCGTGCCCAGCGCCACAAACCTGTGCTTCGACGTGGCGGACGCCGGCGCTGCAACCCGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS TCA 90 bp | GCGTCCGCCACGTCGAAGCACAGGTTTGTGGCGCTGGGCACGGCGTaGCGCGGATCCAGGCCGTACAGCGGCTCTCCAGACCCTGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: ASATSKHRFVALGTA*RGSRPYSGSPDPAP Trigger: GGGCGCAGGGTCTGGAGAGCCGCTGTACGGCCTGGATCCGCGTCACGCCGTGCCCAGCGCCACAAACCTGTGCTTCGACGTGGCGGACGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 90 bp | CCCTCGTTCACCAAAAAGACCGCGTCGCCGCTGCGCAGGGCTAGCTaGCGCCAGCCGTCCACCTCCCGCGAAGCCAGGGGCTGGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: PSFTKKTASPLRRAS*RQPSTSREARGWKP Trigger: CGGCTTCCAGCCCCTGGCTTCGCGGGAGGTGGACGGCTGGCGGCAGCTAGCCCTGCGCAGCGGCGACGCGGTCTTTTTGGTGAACGAGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 90 bp | AGGGGCTGGAAGCCGAAGAGGCGCTGCAGGTTCCGGGCTAGGGGCTaGCCGGCGGGCACGTGGAAGGCGATGTGGCACAAACGAAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: RGWKPKRRCRFRARG*PAGTWKAMWHKRRA Trigger: CGCCCTTCGTTTGTGCCACATCGCCTTCCACGTGCCCGCCGGGCAGCCCCTAGCCCGGAACCTGCAGCGCCTCTTCGGCTTCCAGCCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 90 bp | CTCCAGACCCTGCGCCCTCGTTCACCAAAAAGACCGCGTCGCCGCTaGGCAGGGCTAGCTGCCGCCAGCCGTCCACCTCCCGCGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LQTLRPRSPKRPRRR*AGLAAASRPPPAKP Trigger: TGGCTTCGCGGGAGGTGGACGGCTGGCGGCAGCTAGCCCTGCGCAGCGGCGACGCGGTCTTTTTGGTGAACGAGGGCGCAGGGTCTGGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 90 bp | CACGGCGTGACGCGGATCCAGGCCGTACAGCGGCTCTCCAGACCCTaGGCCCTCGTTCACCAAAAAGACCGCGTCGCCGCTGCGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: HGVTRIQAVQRLSRP*ALVHQKDRVAAAQG Trigger: GCCCTGCGCAGCGGCGACGCGGTCTTTTTGGTGAACGAGGGCGCAGGGTCTGGAGAGCCGCTGTACGGCCTGGATCCGCGTCACGCCGTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | TTGCAGCGCCGGCGTCCGCCACGTCGAAGCACAGGTTTGTGGCGCTaGGCACGGCGTGACGCGGATCCAGGCCGTACAGCGGCTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LQRRRPPRRSTGLWR*ARRDADPGRTAALQ Trigger: CTGGAGAGCCGCTGTACGGCCTGGATCCGCGTCACGCCGTGCCCAGCGCCACAAACCTGTGCTTCGACGTGGCGGACGCCGGCGCTGCAA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 90 bp | CGGAAAGAAGTCACCCGCCGACCCCTGAGAGCTCGCGGTTCTCCCTaGAGCGCCACCCCAGCCAGGAGCAGCGTCTGGACCACCGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RKEVTRRPLRARGSP*SATPARSSVWTTGS Trigger: AGACCCGGTGGTCCAGACGCTGCTCCTGGCTGGGGTGGCGCTGCAGGGAGAACCGCGAGCTCTCAGGGGTCGGCGGGTGACTTCTTTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | GCACGTGGAAGGCGATGTGGCACAAACGAAGGGCGGGCGCGGCCATaGCGCTCTGGACGGCGACCTAGACTTGTCCTTCTGGGGCCGCTT | + |
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Preference number: 5 (lower is better) Translates to: ARGRRCGTNEGRARP*RSGRRPRLVLLGPL Trigger: AAGCGGCCCCAGAAGGACAAGTCTAGGTCGCCGTCCAGAGCGCCATGGCCGCGCCCGCCCTTCGTTTGTGCCACATCGCCTTCCACGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 90 bp | CCCTCAGTGGCCTCCACAATGTTAGGCGTATACAGCCCCACGTGCTaGAGGCCTGGCCCCTTGTGCCGGGCCAGGAACTGCTCCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: PSVASTMLGVYSPTC*RPGPLCRARNCSTW Trigger: CCAGGTGGAGCAGTTCCTGGCCCGGCACAAGGGGCCAGGCCTGCAGCACGTGGGGCTGTATACGCCTAACATTGTGGAGGCCACTGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | GGGCGCGGCCATGGCGCTCTGGACGGCGACCTAGACTTGTCCTTCTaGGGCCGCTTACTTGTGGTTGGGGACTTCGGGGCTCTCAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: GRGHGALDGDLDLSF*GRLLVVGDFGALSP Trigger: AGGACTGAGAGCCCCGAAGTCCCCAACCACAAGTAAGCGGCCCCAGAAGGACAAGTCTAGGTCGCCGTCCAGAGCGCCATGGCCGCGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | GGCCTCCACAATGTTAGGCGTATACAGCCCCACGTGCTGCAGGCCTaGCCCCTTGTGCCGGGCCAGGAACTGCTCCACCTGGTCCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: GLHNVRRIQPHVLQA*PLVPGQELLHLVLS Trigger: CGACAGGACCAGGTGGAGCAGTTCCTGGCCCGGCACAAGGGGCCAGGCCTGCAGCACGTGGGGCTGTATACGCCTAACATTGTGGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | CAGATGAGGCTCGTGCCCTGCAGCTCGGATCTGCCTCTCCTTTCCTaGCTGCTGGTAGTATGCCCCAGGGGGAGCCAGGAACTGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: QMRLVPCSSDLPLLS*LLVVCPRGSQELAS Trigger: GGAGGCCAGTTCCTGGCTCCCCCTGGGGCATACTACCAGCAGCCAGGAAAGGAGAGGCAGATCCGAGCTGCAGGGCACGAGCCTCATCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 90 bp | GACTCAGCCAGAACAAGAGTGGGGACAATGCTGCCCGGCTGGGCCTaGAGGGCTGTAAGCCTCAGTCCCCCAAGCCCAAACCCTGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: DSARTRVGTMLPGWA*RAVSLSPPSPNPAV Trigger: GACAGCAGGGTTTGGGCTTGGGGGACTGAGGCTTACAGCCCTGCAGGCCCAGCCGGGCAGCATTGTCCCCACTCTTGTTCTGGCTGAGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 90 bp | TCCTCAGTTCTGTGCTGGTCTCCCCAGAGCTGCAGGACAGCTGGCTaGACCCAGCCCTGGGCATCCTTAGGCTTCCTGGCTCCTGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SSVLCWSPQSCRTAG*TQPWASLGFLAPGR Trigger: TCTGCCAGGAGCCAGGAAGCCTAAGGATGCCCAGGGCTGGGTGCAGCCAGCTGTCCTGCAGCTCTGGGGAGACCAGCACAGAACTGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | GGAAGGGACTCAGCCAGAACAAGAGTGGGGACAATGCTGCCCGGCTaGGCCTGCAGGGCTGTAAGCCTCAGTCCCCCAAGCCCAAACCCT | + |
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Preference number: 5 (lower is better) Translates to: GRDSARTRVGTMLPG*ACRAVSLSPPSPNP Trigger: AGGGTTTGGGCTTGGGGGACTGAGGCTTACAGCCCTGCAGGCCCAGCCGGGCAGCATTGTCCCCACTCTTGTTCTGGCTGAGTCCCTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | GGACGGCGACCTAGACTTGTCCTTCTGGGGCCGCTTACTTGTGGTTaGGGACTTCGGGGCTCTCAGTCCTGGGCTGATCGTCCGGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GRRPRLVLLGPLTCG*GLRGSQSWADRPEL Trigger: CAACTCCGGACGATCAGCCCAGGACTGAGAGCCCCGAAGTCCCCAACCACAAGTAAGCGGCCCCAGAAGGACAAGTCTAGGTCGCCGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 90 bp | CCCAAACCCTGCTGTCATTTCGAGGCCCAGCTCGGGATCCTCACCTaGGCTCAGCGGCAAGTGGCAAAAGCCCAGGCAGTCGTGGAACCA | + |
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Preference number: 5 (lower is better) Translates to: PKPCCHFEAQLGILT*AQRQVAKAQAVVEP Trigger: TGGTTCCACGACTGCCTGGGCTTTTGCCACTTGCCGCTGAGCCCAGGTGAGGATCCCGAGCTGGGCCTCGAAATGACAGCAGGGTTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS TCA 90 bp | CCTGGCTCCTGGCAGATTGCTCCTGTACGGACTGCCACAGAGCTCTaGTGTTGCCCTGACCAAAGCCAGTGGCCCCCTGCCTCTGAATCA | + |
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Preference number: 5 (lower is better) Translates to: PGSWQIAPVRTATEL*CCPDQSQWPPASES Trigger: TGATTCAGAGGCAGGGGGCCACTGGCTTTGGTCAGGGCAACATCAGAGCTCTGTGGCAGTCCGTACAGGAGCAATCTGCCAGGAGCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS TCA 90 bp | TTGCCTTTATCACCATCTAGCAGGATCCCCTGTCGAGCAAGCAGATaGGGCTCGTGCCCTGCAGCTCGGATCTGCCTCTCCTTTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LPLSPSSRIPCRASR*GSCPAARICLSFPG Trigger: GCCAGGAAAGGAGAGGCAGATCCGAGCTGCAGGGCACGAGCCTCATCTGCTTGCTCGACAGGGGATCCTGCTAGATGGTGATAAAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS TCA 90 bp | TCCAGGAAGAAAGTGTCCTCAGTAAAAAGGGACTTGGTGAAGACCTaGAGCAGAAACTTGCCTTTATCACCATCTAGCAGGATCCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: SRKKVSSVKRDLVKT*SRNLPLSPSSRIPC Trigger: ACAGGGGATCCTGCTAGATGGTGATAAAGGCAAGTTTCTGCTTCAGGTCTTCACCAAGTCCCTTTTTACTGAGGACACTTTCTTCCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS TCA 72 bp | CGGGGGTGCAGGCCAAGGTCAGGTGGTCCACGCGGCTaGCCCACCCGGGGCCAGGCGCAGAGGACACGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RGCRPRSGGPRG*PTRGQAQRTRA Trigger: GGCCCGTGTCCTCTGCGCCTGGCCCCGGGTGGGTCAGCCGCGTGGACCACCTGACCTTGGCCTGCACCCCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | GCTAGGGGCTGCCCGGCGGGCACGTGGAAGGCGATGTaGCACAAACGAAGGGCGGGCGCGGCCATGGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: ARGCPAGTWKAM*HKRRAGAAMAL Trigger: GAGCGCCATGGCCGCGCCCGCCCTTCGTTTGTGCCACATCGCCTTCCACGTGCCCGCCGGGCAGCCCCTAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CAA 90 bp | GCTCCCGGGTTGCAGCGCCGGCGTCCGCCACGTCGAAGCACAGGTTaGTGGCGCTGGGCACGGCGTGACGCGGATCCAGGCCGTACAGCG | + |
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Preference number: 6 (lower is better) Translates to: APGLQRRRPPRRSTG*WRWARRDADPGRTA Trigger: CGCTGTACGGCCTGGATCCGCGTCACGCCGTGCCCAGCGCCACAAACCTGTGCTTCGACGTGGCGGACGCCGGCGCTGCAACCCGGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 72 bp | GTCACCCGCCGACCCCTGAGAGCTCGCGGTTCTCCCTaGAGCGCCACCCCAGCCAGGAGCAGCGTCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: VTRRPLRARGSP*SATPARSSVWT Trigger: GGTCCAGACGCTGCTCCTGGCTGGGGTGGCGCTGCAGGGAGAACCGCGAGCTCTCAGGGGTCGGCGGGTGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 72 bp | ACCAAAAAGACCGCGTCGCCGCTGCGCAGGGCTAGCTaGCGCCAGCCGTCCACCTCCCGCGAAGCCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: TKKTASPLRRAS*RQPSTSREARG Trigger: GCCCCTGGCTTCGCGGGAGGTGGACGGCTGGCGGCAGCTAGCCCTGCGCAGCGGCGACGCGGTCTTTTTGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | TGCAGGTTCCGGGCTAGGGGCTGCCCGGCGGGCACGTaGAAGGCGATGTGGCACAAACGAAGGGCGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: CRFRARGCPAGT*KAMWHKRRAGA Trigger: CGCGCCCGCCCTTCGTTTGTGCCACATCGCCTTCCACGTGCCCGCCGGGCAGCCCCTAGCCCGGAACCTGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | TGCCGCCAGCCGTCCACCTCCCGCGAAGCCAGGGGCTaGAAGCCGAAGAGGCGCTGCAGGTTCCGGGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: CRQPSTSREARG*KPKRRCRFRAR Trigger: CCTAGCCCGGAACCTGCAGCGCCTCTTCGGCTTCCAGCCCCTGGCTTCGCGGGAGGTGGACGGCTGGCGGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | CAGCGCCGGCGTCCGCCACGTCGAAGCACAGGTTTGTaGCGCTGGGCACGGCGTGACGCGGATCCAGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: QRRRPPRRSTGL*RWARRDADPGR Trigger: ACGGCCTGGATCCGCGTCACGCCGTGCCCAGCGCCACAAACCTGTGCTTCGACGTGGCGGACGCCGGCGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 72 bp | CTGCGCCCTCGTTCACCAAAAAGACCGCGTCGCCGCTaGGCAGGGCTAGCTGCCGCCAGCCGTCCACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LRPRSPKRPRRR*AGLAAASRPPP Trigger: GGGAGGTGGACGGCTGGCGGCAGCTAGCCCTGCGCAGCGGCGACGCGGTCTTTTTGGTGAACGAGGGCGCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | CGGCGTCCGCCACGTCGAAGCACAGGTTTGTGGCGCTaGGCACGGCGTGACGCGGATCCAGGCCGTACAGCG | + |
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Preference number: 6 (lower is better) Translates to: RRPPRRSTGLWR*ARRDADPGRTA Trigger: CGCTGTACGGCCTGGATCCGCGTCACGCCGTGCCCAGCGCCACAAACCTGTGCTTCGACGTGGCGGACGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CAA 72 bp | TTGCAGCGCCGGCGTCCGCCACGTCGAAGCACAGGTTaGTGGCGCTGGGCACGGCGTGACGCGGATCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LQRRRPPRRSTG*WRWARRDADPG Trigger: GCCTGGATCCGCGTCACGCCGTGCCCAGCGCCACAAACCTGTGCTTCGACGTGGCGGACGCCGGCGCTGCAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | CCTGGCCCCTTGTGCCGGGCCAGGAACTGCTCCACCTaGTCCTGTCGTGTCGTCGCCCCCGGAAGGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: PGPLCRARNCST*SCRVVAPGRDS Trigger: TGAGTCCCTTCCGGGGGCGACGACACGACAGGACCAGGTGGAGCAGTTCCTGGCCCGGCACAAGGGGCCAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 72 bp | AAGCCGAAGAGGCGCTGCAGGTTCCGGGCTAGGGGCTaGCCGGCGGGCACGTGGAAGGCGATGTGGCACAAA | + |
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Preference number: 6 (lower is better) Translates to: KPKRRCRFRARG*PAGTWKAMWHK Trigger: TTTGTGCCACATCGCCTTCCACGTGCCCGCCGGGCAGCCCCTAGCCCGGAACCTGCAGCGCCTCTTCGGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | TCGTCGCCCCCGGAAGGGACTCAGCCAGAACAAGAGTaGGGACAATGCTGCCCGGCTGGGCCTGCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSPPEGTQPEQE*GQCCPAGPAGL Trigger: CAGCCCTGCAGGCCCAGCCGGGCAGCATTGTCCCCACTCTTGTTCTGGCTGAGTCCCTTCCGGGGGCGACGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CAA 72 bp | GGCGTATACAGCCCCACGTGCTGCAGGCCTGGCCCCTaGTGCCGGGCCAGGAACTGCTCCACCTGGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GVYSPTCCRPGP*CRARNCSTWSC Trigger: ACAGGACCAGGTGGAGCAGTTCCTGGCCCGGCACAAGGGGCCAGGCCTGCAGCACGTGGGGCTGTATACGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS TCA 72 bp | ACGTCGAAGCACAGGTTTGTGGCGCTGGGCACGGCGTaGCGCGGATCCAGGCCGTACAGCGGCTCTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: TSKHRFVALGTA*RGSRPYSGSPD Trigger: GTCTGGAGAGCCGCTGTACGGCCTGGATCCGCGTCACGCCGTGCCCAGCGCCACAAACCTGTGCTTCGACGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 72 bp | ACGCGGATCCAGGCCGTACAGCGGCTCTCCAGACCCTaGGCCCTCGTTCACCAAAAAGACCGCGTCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: TRIQAVQRLSRP*ALVHQKDRVAA Trigger: AGCGGCGACGCGGTCTTTTTGGTGAACGAGGGCGCAGGGTCTGGAGAGCCGCTGTACGGCCTGGATCCGCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CAA 72 bp | GGGCGCGGCCATGGCGCTCTGGACGGCGACCTAGACTaGTCCTTCTGGGGCCGCTTACTTGTGGTTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GRGHGALDGDLD*SFWGRLLVVGD Trigger: GTCCCCAACCACAAGTAAGCGGCCCCAGAAGGACAAGTCTAGGTCGCCGTCCAGAGCGCCATGGCCGCGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS TCA 72 bp | TCGCTTTCTTCCGGAAAGAAGTCACCCGCCGACCCCTaGGAGCTCGCGGTTCTCCCTGCAGCGCCACCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLSSGKKSPADP*ELAVLPAAPPQ Trigger: CTGGGGTGGCGCTGCAGGGAGAACCGCGAGCTCTCAGGGGTCGGCGGGTGACTTCTTTCCGGAAGAAAGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 72 bp | GCCTCCACAATGTTAGGCGTATACAGCCCCACGTGCTaGAGGCCTGGCCCCTTGTGCCGGGCCAGGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: ASTMLGVYSPTC*RPGPLCRARNC Trigger: GCAGTTCCTGGCCCGGCACAAGGGGCCAGGCCTGCAGCACGTGGGGCTGTATACGCCTAACATTGTGGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | AGGCGATGTGGCACAAACGAAGGGCGGGCGCGGCCATaGCGCTCTGGACGGCGACCTAGACTTGTCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RRCGTNEGRARP*RSGRRPRLVLL Trigger: CAGAAGGACAAGTCTAGGTCGCCGTCCAGAGCGCCATGGCCGCGCCCGCCCTTCGTTTGTGCCACATCGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | TCAGCCAGAACAAGAGTGGGGACAATGCTGCCCGGCTaGGCCTGCAGGGCTGTAAGCCTCAGTCCCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SARTRVGTMLPG*ACRAVSLSPPS Trigger: GCTTGGGGGACTGAGGCTTACAGCCCTGCAGGCCCAGCCGGGCAGCATTGTCCCCACTCTTGTTCTGGCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | AATGTTAGGCGTATACAGCCCCACGTGCTGCAGGCCTaGCCCCTTGTGCCGGGCCAGGAACTGCTCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: NVRRIQPHVLQA*PLVPGQELLHL Trigger: CAGGTGGAGCAGTTCCTGGCCCGGCACAAGGGGCCAGGCCTGCAGCACGTGGGGCTGTATACGCCTAACATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CAA 90 bp | ACAATGTTAGGCGTATACAGCCCCACGTGCTGCAGGCCTGGCCCCTaGTGCCGGGCCAGGAACTGCTCCACCTGGTCCTGTCGTGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: TMLGVYSPTCCRPGP*CRARNCSTWSCRVV Trigger: GACGACACGACAGGACCAGGTGGAGCAGTTCCTGGCCCGGCACAAGGGGCCAGGCCTGCAGCACGTGGGGCTGTATACGCCTAACATTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 72 bp | CAGGGCTGTAAGCCTCAGTCCCCCAAGCCCAAACCCTaGTGTCATTTCGAGGCCCAGCTCGGGATCCTCACC | + |
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Preference number: 6 (lower is better) Translates to: QGCKPQSPKPKP*CHFEAQLGILT Trigger: GGTGAGGATCCCGAGCTGGGCCTCGAAATGACAGCAGGGTTTGGGCTTGGGGGACTGAGGCTTACAGCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 72 bp | AGAACAAGAGTGGGGACAATGCTGCCCGGCTGGGCCTaGAGGGCTGTAAGCCTCAGTCCCCCAAGCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: RTRVGTMLPGWA*RAVSLSPPSPN Trigger: GTTTGGGCTTGGGGGACTGAGGCTTACAGCCCTGCAGGCCCAGCCGGGCAGCATTGTCCCCACTCTTGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS GCA 72 bp | GATCCCCTGTCGAGCAAGCAGATGAGGCTCGTGCCCTaGAGCTCGGATCTGCCTCTCCTTTCCTGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: DPLSSKQMRLVP*SSDLPLLSWLL Trigger: CAGCAGCCAGGAAAGGAGAGGCAGATCCGAGCTGCAGGGCACGAGCCTCATCTGCTTGCTCGACAGGGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | CATGGCGCTCTGGACGGCGACCTAGACTTGTCCTTCTaGGGCCGCTTACTTGTGGTTGGGGACTTCGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HGALDGDLDLSF*GRLLVVGDFGA Trigger: AGCCCCGAAGTCCCCAACCACAAGTAAGCGGCCCCAGAAGGACAAGTCTAGGTCGCCGTCCAGAGCGCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | TGCTGTCATTTCGAGGCCCAGCTCGGGATCCTCACCTaGGCTCAGCGGCAAGTGGCAAAAGCCCAGGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: CCHFEAQLGILT*AQRQVAKAQAV Trigger: GACTGCCTGGGCTTTTGCCACTTGCCGCTGAGCCCAGGTGAGGATCCCGAGCTGGGCCTCGAAATGACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS TCA 72 bp | TCACCATCTAGCAGGATCCCCTGTCGAGCAAGCAGATaGGGCTCGTGCCCTGCAGCTCGGATCTGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPSSRIPCRASR*GSCPAARICLS Trigger: GGAGAGGCAGATCCGAGCTGCAGGGCACGAGCCTCATCTGCTTGCTCGACAGGGGATCCTGCTAGATGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS TCA 72 bp | TGGCAGATTGCTCCTGTACGGACTGCCACAGAGCTCTaGTGTTGCCCTGACCAAAGCCAGTGGCCCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: WQIAPVRTATEL*CCPDQSQWPPA Trigger: GGCAGGGGGCCACTGGCTTTGGTCAGGGCAACATCAGAGCTCTGTGGCAGTCCGTACAGGAGCAATCTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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| CDS CCA 72 bp | CCTAGACTTGTCCTTCTGGGGCCGCTTACTTGTGGTTaGGGACTTCGGGGCTCTCAGTCCTGGGCTGATCGT | + |
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Preference number: 6 (lower is better) Translates to: PRLVLLGPLTCG*GLRGSQSWADR Trigger: ACGATCAGCCCAGGACTGAGAGCCCCGAAGTCCCCAACCACAAGTAAGCGGCCCCAGAAGGACAAGTCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334815.6 |
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