RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HPCAL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000116983

Ensembl transcript IDs: ENST00000372844.8, ENST00000612703.3, ENST00000617690.2

Found 576 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTaGAGGGACGGGAGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTG +
Preference number: 1 (lower is better)
Translates to: NLCQPCALRQVSLSW*RDGRPVSLLKAGPV
Trigger: CACTGGCCCTGCCTTGAGAAGAGACACAGGTCTCCCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp GGGATGGGGAAGAGACCCCCTTTATGGGATCTGGAGCCTCAGGAATaGACAGACCCAATTTGGCCCTGTGACAGGCCTGTGGGACCACAT +
Preference number: 1 (lower is better)
Translates to: GMGKRPPLWDLEPQE*TDPIWPCDRPVGPH
Trigger: ATGTGGTCCCACAGGCCTGTCACAGGGCCAAATTGGGTCTGTCCATTCCTGAGGCTCCAGATCCCATAAAGGGGGTCTCTTCCCCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp GAGCATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTaGTCCCAGTTCCTGGCCTGGCATTGTGTGTTCACACTGCTGGGC +
Preference number: 1 (lower is better)
Translates to: EHVLGHLLFLPSARW*SQFLAWHCVFTLLG
Trigger: GCCCAGCAGTGTGAACACACAATGCCAGGCCAGGAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp CAGGAGCATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATaGTGGTCCCAGTTCCTGGCCTGGCATTGTGTGTTCACACTGCTG +
Preference number: 1 (lower is better)
Translates to: QEHVLGHLLFLPSAR*WSQFLAWHCVFTLL
Trigger: CAGCAGTGTGAACACACAATGCCAGGCCAGGAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp ATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTaGTGCAGGGACGGGAGACCTGTGTCTCTTCTCAAGGCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: INLCQPCALRQVSLS*CRDGRPVSLLKAGP
Trigger: TGGCCCTGCCTTGAGAAGAGACACAGGTCTCCCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 90 bp AGAGTTTTCACCTGCAGAGAAGCAGGACAGGTGGGCACTCAGGAGTaGGGAGCATGCTGCATCTCTTTCCTGCAGATGCAATTCCCCTGC +
Preference number: 1 (lower is better)
Translates to: RVFTCREAGQVGTQE*GACCISFLQMQFPC
Trigger: GCAGGGGAATTGCATCTGCAGGAAAGAGATGCAGCATGCTCCTCACTCCTGAGTGCCCACCTGTCCTGCTTCTCTGCAGGTGAAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp ATAGCAACCCAGTGGCCTTGCTACCTCCAAGGGCCCAGTAGAGCTTaGGACCAAGCTCTATTGATCAGCATCCCCCAGAGTTTTCACCTG +
Preference number: 1 (lower is better)
Translates to: IATQWPCYLQGPSRA*DQALLISIPQSFHL
Trigger: CAGGTGAAAACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCCAAGCTCTACTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp CTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCTGGCCTaGCATTGTGTGTTCACACTGCTGGGCTGTCTGAGAATATTGGGC +
Preference number: 1 (lower is better)
Translates to: LLFLPSARWWSQFLA*HCVFTLLGCLRILG
Trigger: GCCCAATATTCTCAGACAGCCCAGCAGTGTGAACACACAATGCCAGGCCAGGAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 90 bp CAGCTAAGCCAGGCTGGTGAGCATCTATGTGTCTGTGATGCTGACTaGCCGCACAAGACATACCTAATAGCCAGTTCCTGGGAGCAATGC +
Preference number: 1 (lower is better)
Translates to: QLSQAGEHLCVCDAD*PHKTYLIASSWEQC
Trigger: GCATTGCTCCCAGGAACTGGCTATTAGGTATGTCTTGTGCGGTCAGTCAGCATCACAGACACATAGATGCTCACCAGCCTGGCTTAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 90 bp GAGGATAGCAAAAGGATAGCAACCCAGTGGTTGCAAACCAGTGGTTaGTATCCCCAGCAAGAGGATAGCAACCCAGTGGCCTTGCTACCT +
Preference number: 1 (lower is better)
Translates to: EDSKRIATQWLQTSG*YPQQEDSNPVALLP
Trigger: AGGTAGCAAGGCCACTGGGTTGCTATCCTCTTGCTGGGGATAGCAACCACTGGTTTGCAACCACTGGGTTGCTATCCTTTTGCTATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp CCCCCTTTATGGGATCTGGAGCCTCAGGAATGGACAGACCCAATTTaGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAAT +
Preference number: 1 (lower is better)
Translates to: PPLWDLEPQEWTDPI*PCDRPVGPHPIKHN
Trigger: ATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCAAATTGGGTCTGTCCATTCCTGAGGCTCCAGATCCCATAAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 90 bp AACATCCTTGAGGCATTGCTGGATAAACAACTGCTAGTTCCTGCCTaGGGATGTGAACTCCCCAGCCTCACCATATGGCTGGTCATGAGC +
Preference number: 1 (lower is better)
Translates to: NILEALLDKQLLVPA*GCELPSLTIWLVMS
Trigger: GCTCATGACCAGCCATATGGTGAGGCTGGGGAGTTCACATCCTCAGGCAGGAACTAGCAGTTGTTTATCCAGCAATGCCTCAAGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 90 bp ATTTTTGTGTCTGTGCAAGTCATACATAAATCTCTGCCAGCCTTGTaGTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGGAGACC +
Preference number: 1 (lower is better)
Translates to: IFVSVQVIHKSLPAL*FAASLSQLVQGRET
Trigger: GGTCTCCCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTATGACTTGCACAGACACAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 90 bp ATTGTCTGTATATTTTTGTGTCTGTGCAAGTCATACATAAATCTCTaGCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: IVCIFLCLCKSYINL*QPCALRQVSLSWCR
Trigger: CCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTATGACTTGCACAGACACAAAAATATACAGACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp AGCATGCCTGGCACATTTTTAGGCATTTCGTCCATAAATTATGTCTaGGTGCCTAAACAGTGGCCAGGTGAGCCTTTTCTTCTAGCTCTT +
Preference number: 1 (lower is better)
Translates to: SMPGTFLGISSINYV*VPKQWPGEPFLLAL
Trigger: AAGAGCTAGAAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAATGTGCCAGGCATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp AAGATTAATTTTTCCGGCAGTCAAAGCATGCAGCTGTATAGCTCATaGATCCAAAATTGGGAAGCAGGCATTGGAAAGCAGAACCAGCAC +
Preference number: 1 (lower is better)
Translates to: KINFSGSQSMQLYSS*IQNWEAGIGKQNQH
Trigger: GTGCTGGTTCTGCTTTCCAATGCCTGCTTCCCAATTTTGGATCCATGAGCTATACAGCTGCATGCTTTGACTGCCGGAAAAATTAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 90 bp AGACCTGATGAAGAAGCAAGATTAATTTTTCCGGCAGTCAAAGCATaGAGCTGTATAGCTCATGGATCCAAAATTGGGAAGCAGGCATTG +
Preference number: 1 (lower is better)
Translates to: RPDEEARLIFPAVKA*SCIAHGSKIGKQAL
Trigger: CAATGCCTGCTTCCCAATTTTGGATCCATGAGCTATACAGCTGCATGCTTTGACTGCCGGAAAAATTAATCTTGCTTCTTCATCAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTaGCCAGGTGAGCCTTTTCTTCTAGCTCTTTCTGATTCTGTGGCA +
Preference number: 1 (lower is better)
Translates to: FLGISSINYVWVPKQ*PGEPFLLALSDSVA
Trigger: TGCCACAGAATCAGAAAGAGCTAGAAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 90 bp TCAAGAATGATGAATAAAACATGTAAGACATTCTTGACCCCACAGTaGTCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCA +
Preference number: 1 (lower is better)
Translates to: SRMMNKTCKTFLTPQ*SLKSAQSLTQGGSS
Trigger: TGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGATCACTGTGGGGTCAAGAATGTCTTACATGTTTTATTCATCATTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGGAGTGTCCCTCCTCCTaGGAGGCCAGCCAGAGAGGT +
Preference number: 2 (lower is better)
Translates to: SLPALCFAASLSQLVQGRECPSS*EASQRG
Trigger: ACCTCTCTGGCTGGCCTCCCAGGAGGAGGGACACTC...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 90 bp CCTGGGACACCCAGGAGTATGCAGGAGCATGTCCTGGGCCACCTGTaGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PGTPRSMQEHVLGHL*FLPSARWWSQFLAW
Trigger: CCAGGCCAGGAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATGCTCCTGCATACTCCTGGGTGTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGCTCCCAGGACAGCACTaGGCTGTTAGCACAGCTGCC +
Preference number: 2 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPELPGQH*AVSTAA
Trigger: GGCAGCTGTGCTAACAGCTCAGTGCTGTCCTGGGAG...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCGAGTGTCCCTCCTCCTaGGAGGCCAGCCAGAGAGGT +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFECPSS*EASQRG
Trigger: ACCTCTCTGGCTGGCCTCCCAGGAGGAGGGACACTC...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGCCCAGAGTTTTCACCTaGAGAGAAGCAGGACAGGTG +
Preference number: 2 (lower is better)
Translates to: SLPALCFAASLSQLVQGRPRVFT*REAGQV
Trigger: CACCTGTCCTGCTTCTCTGCAGGTGAAAACTCTGGG...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGCCATCAGCAAGATGGTaGTCCCAGTTCCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEPSARW*SQFLAW
Trigger: CCAGGCCAGGAACTGGGACCACCATCTTGCTGATGG...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGCCTTCCAGCACCTTCTaGTTAGCTGAGACCCTGACG +
Preference number: 2 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEPSSTF*LAETLT
Trigger: CGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGG...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGCAATGTAACTTGCCCTaGTGTCAACCTCTGCACAGC +
Preference number: 2 (lower is better)
Translates to: SLPALCFAASLSQLVQGRQCNLP*CQPLHS
Trigger: GCTGTGCAGAGGTTGACAGCAGGGCAAGTTACATTG...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGAGTGTCCCTCCTCCTaGGAGGCCAGCCAGAGAGGT +
Preference number: 2 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGECPSS*EASQRG
Trigger: ACCTCTCTGGCTGGCCTCCCAGGAGGAGGGACACTC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGAGGATAGCAACCCAGTaGTTGCAAACCAGTGGTTGC +
Preference number: 2 (lower is better)
Translates to: SLPALCFAASLSQLVQGRRIATQ*LQTSGC
Trigger: GCAACCACTGGTTTGCAACCACTGGGTTGCTATCCT...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCGTCCCTCAAAGATCTTaGTGGAGGGGAGGAAGGGCT +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFVPQRS*WRGGRA
Trigger: AGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGAC...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCCCAATTTGGCCCTGTaGCAGGCCTGTGGGACCACA +
Preference number: 2 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGPNLAL*QACGTT
Trigger: TGTGGTCCCACAGGCCTGTCACAGGGCCAAATTGGG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCAGGACCTGTCTCTTTTaGAGGGTGAGGTGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFRTCLF*RVRWSL
Trigger: GAGGGACCACCTCACCCTGCAAAAGAGACAGGTCCT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTAGGACCTGTCTCTTTTaGAGGGTGAGGTGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSRTCLF*RVRWSL
Trigger: GAGGGACCACCTCACCCTGCAAAAGAGACAGGTCCT...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCCTTCCAGCACCTTCTaGTTAGCTGAGACCCTGACG +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFPSSTF*LAETLT
Trigger: CGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGG...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGCAACCCAGTGGCCTTaGTACCTCCAAGGGCCCAGT +
Preference number: 2 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGATQWP*YLQGPS
Trigger: ACTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGCATCAGGTTGGGAGGTaGCCATGCCCCTTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGHQVGR*PCPFWP
Trigger: TGGCCAGAAGGGGCATGGCCACCTCCCAACCTGATG...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAAATGGACATTGGTTCTaGCCAAGTGGGAGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PDGWKFASQPYELPEGTRNGHWF*PSGRWG
Trigger: GCCCCACCTCCCACTTGGCCAGAACCAATGTCCATT...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTCTTAACCTCACCTCCTaGGGCAAAAGCCAACTCCCC +
Preference number: 2 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSLNLTS*GKSQLP
Trigger: GGGGAGTTGGCTTTTGCCCCAGGAGGTGAGGTTAAG...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 90 bp CCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTaGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGATGTGTCT +
Preference number: 2 (lower is better)
Translates to: PSSTFCLAETLTAGS*PHNPMSFQRAQDVS
Trigger: AGACACATCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 90 bp GTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCTGGCCTGGCATaGTGTGTTCACACTGCTGGGCTGTCTGAGAATATTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: VPSISKMVVPVPGLA*CVHTAGLSENIGPE
Trigger: CTCAGGCCCAATATTCTCAGACAGCCCAGCAGTGTGAACACACAATGCCAGGCCAGGAACTGGGACCACCATCTTGCTGATGGAAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGGCTAGATTCAGCATTTaGAGGGAAGGAACCTCACTT +
Preference number: 2 (lower is better)
Translates to: SLPALCFAASLSQLVQGRARFSI*REGTSL
Trigger: AAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGC...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAATGCCCAATGGACATTaGTTCTGGCCAAGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: PDGWKFASQPYELPEGTRMPNGH*FWPSGR
Trigger: CCTCCCACTTGGCCAGAACCAATGTCCATTGGGCAT...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 90 bp TTGTGTCTGTGCAAGTCATACATAAATCTCTGCCAGCCTTGTGCTTaGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGGAGACCTGTG +
Preference number: 2 (lower is better)
Translates to: LCLCKSYINLCQPCA*RQVSLSWCRDGRPV
Trigger: CACAGGTCTCCCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTATGACTTGCACAGACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGTCCTGCCTGAGGATGTaGACTCCCCAGCCTCACCAT +
Preference number: 2 (lower is better)
Translates to: IHKSLPALCFAASLSQLVSCLRM*TPQPHH
Trigger: ATGGTGAGGCTGGGGAGTTCACATCCTCAGGCAGGA...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCGGGATGCTTCCTCTCTaGATCTCAGCTTCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFGMLPL*ISASKS
Trigger: AGACTTGGAAGCTGAGATTCAGAGAGGAAGCATCCC...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCCCTGTGTCACCTCCTaGCTATGTGATCTTGCACAA +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFPCVTS*LCDLAQ
Trigger: TTGTGCAAGATCACATAGTCAGGAGGTGACACAGGG...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTAGGACCTGTCTCTTTTaGAGGGTGAGGTGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGRTCLF*RVRWSL
Trigger: GAGGGACCACCTCACCCTGCAAAAGAGACAGGTCCT...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGCTTAACCTCACCTCCTaGGGCAAAAGCCAACTCCCC +
Preference number: 2 (lower is better)
Translates to: LPCCQPLHSLVTEMDREELNLTS*GKSQLP
Trigger: GGGGAGTTGGCTTTTGCCCCAGGAGGTGAGGTTAAG...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGATGAGATGGGGCACATaGCAAGCCTTTGAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEMRWGT*QAFESH
Trigger: ATGGCTTTCAAAGGCTTGCCATGTGCCCCATCTCAT...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 90 bp CTGGCCTGGCATTGTGTGTTCACACTGCTGGGCTGTCTGAGAATATaGGGCCTGAGGAGCAAAAATCACCCATGGGTATGTGTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: LAWHCVFTLLGCLRI*GLRSKNHPWVCVSR
Trigger: TCTGGACACACATACCCATGGGTGATTTTTGCTCCTCAGGCCCAATATTCTCAGACAGCCCAGCAGTGTGAACACACAATGCCAGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTGTCTCTTTTGCAGGGTaGGGTGGTCCCTCAAAGATC +
Preference number: 2 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGVSFAG*GGPSKI
Trigger: GATCTTTGAGGGACCACCTCACCCTGCAAAAGAGAC...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGAAGAAAGGACTGAATaGACGCTCCAAAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGEERTE*TLQRLG
Trigger: CCCCAGCCTTTGGAGCGTTCATTCAGTCCTTTCTTC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTCACCTTCTGCTTAGCTaGGACCCTGACGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PPDYVILHKGCFLSESQLHLLLS*DPDGWK
Trigger: CTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTG...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTTCCTGCCTGAGGATGTaGACTCCCCAGCCTCACCAT +
Preference number: 2 (lower is better)
Translates to: PPDYVILHKGCFLSESQLSCLRM*TPQPHH
Trigger: ATGGTGAGGCTGGGGAGTTCACATCCTCAGGCAGGA...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGCTGCATCTCTTTCCTaGAGATGCAATTCCCCTGCC +
Preference number: 2 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGAASLS*RCNSPA
Trigger: GGCAGGGGAATTGCATCTGCAGGAAAGAGATGCAGC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCAGTTCCTGGGAGCAATaGAACATCCTTGAGGCATTG +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFSSWEQ*NILEAL
Trigger: CAATGCCTCAAGGATGTTGCATTGCTCCCAGGAACT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGAGGCAGAACACTGAGTaGTTGAAAATGTGGGGACTT +
Preference number: 2 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPERQNTE*LKMWGL
Trigger: AAGTCCCCACATTTTCAAGCACTCAGTGTTCTGCCT...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGTTTTGCAGGGTGAGGTaGTCCCTCAAAGATCTTGAT +
Preference number: 2 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEFCRVR*SLKDLD
Trigger: ATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCCCCTTTATGGGATCTaGAGCCTCAGGAATGGACAG +
Preference number: 2 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGPLYGI*SLRNGQ
Trigger: CTGTCCATTCCTGAGGCTCCAGATCCCATAAAGGGG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGGGCCCAGTAGAGCTTaGGACCAAGCTCTATTGATC +
Preference number: 2 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGGPSRA*DQALLI
Trigger: GATCAATAGAGCTTGGTCCCAAGCTCTACTGGGCCC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCCCAGCCTCACCATATaGCTGGTCATGAGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: IHKSLPALCFAASLSQLVPSLTI*LVMSKR
Trigger: CCTCTTGCTCATGACCAGCCATATGGTGAGGCTGGG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCATGAGATGGGGCACATaGCAAGCCTTTGAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFMRWGT*QAFESH
Trigger: ATGGCTTTCAAAGGCTTGCCATGTGCCCCATCTCAT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCTTCCATCAGCAAGATaGTGGTCCCAGTTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: IHKSLPALCFAASLSQLVLPSAR*WSQFLA
Trigger: GGCCAGGAACTGGGACCACCATCTTGCTGATGGAAG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGGGCACTCAGGAGTaGGGAGCATGCTGCATCTCT +
Preference number: 2 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLVGTQE*GACCIS
Trigger: AGAGATGCAGCATGCTCCTCACTCCTGAGTGCCCAC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGCCCTGTGTCACCTCCTaGCTATGTGATCTTGCACAA +
Preference number: 2 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGPCVTS*LCDLAQ
Trigger: TTGTGCAAGATCACATAGTCAGGAGGTGACACAGGG...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCAAAGACAATGCAGGATaGTTCGAGGGTTCTGAGTCA +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFKDNAG*FEGSES
Trigger: TGACTCAGAACCCTCGAAGCATCCTGCATTGTCTTT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCTCCCCTATGCCCAATaGACATTGGTTCTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: IHKSLPALCFAASLSQLVLPYAQ*TLVLAK
Trigger: CTTGGCCAGAACCAATGTCCATTGGGCATAGGGGAG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCAGCAAAAATCACCCATaGGTATGTGTGTCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFSKNHP*VCVSRS
Trigger: GCTTCTGGACACACATACCCATGGGTGATTTTTGCT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCCCCAATTTGGCCCTGTaGCAGGCCTGTGGGACCACA +
Preference number: 2 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIPNLAL*QACGTT
Trigger: TGTGGTCCCACAGGCCTGTCACAGGGCCAAATTGGG...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGAAGAAAGGACTGAATaGACGCTCCAAAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PPDYVILHKGCFLSESQLEERTE*TLQRLG
Trigger: CCCCAGCCTTTGGAGCGTTCATTCAGTCCTTTCTTC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGCTTTTTCCTGTCCCTaGAGTCAGCACCCAACCGGA +
Preference number: 2 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLAFSCP*SQHPTG
Trigger: TCCGGTTGGGTGCTGACTTCAGGGACAGGAAAAAGC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCTGATTCTGTGGCAGTaGAGGAACAAGTCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGLILWQ*RNKSSS
Trigger: AGAACTGGACTTGTTCCTTCACTGCCACAGAATCAG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGGGACCAAGCTCTATTaGTCAGCATCCCCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: PPDYVILHKGCFLSESQLGTKLY*SASPRV
Trigger: AACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGAAGCCAACTCCCCTATaGCCAATGGACATTGGTTCT +
Preference number: 2 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEKPTPL*PMDIGS
Trigger: AGAACCAATGTCCATTGGGCATAGGGGAGTTGGCTT...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCCATCAGGTTGGGAGGTaGCCATGCCCCTTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIHQVGR*PCPFWP
Trigger: TGGCCAGAAGGGGCATGGCCACCTCCCAACCTGATG...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCATTGGTTCTGGCCAAGTaGGAGGTGGGGCTAGAAGAC +
Preference number: 2 (lower is better)
Translates to: ADLRFGVRKSLSNRACLALVLAK*EVGLED
Trigger: GTCTTCTAGCCCCACCTCCCACTTGGCCAGAACCAA...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCAAATGGACATTGGTTCTaGCCAAGTGGGAGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: ADLRFGVRKSLSNRACLANGHWF*PSGRWG
Trigger: GCCCCACCTCCCACTTGGCCAGAACCAATGTCCATT...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGTGGGTGCCTAAACAGTaGCCAGGTGAGCCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: IHKSLPALCFAASLSQLVWVPKQ*PGEPFL
Trigger: AAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCA...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCTCCATAAATTATGTCTaGGTGCCTAAACAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFSINYV*VPKQWP
Trigger: TGGCCACTGTTTAGGCACCCAGACATAATTTATGGA...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGGGCCCAGTAGAGCTTaGGACCAAGCTCTATTGATC +
Preference number: 2 (lower is better)
Translates to: PPDYVILHKGCFLSESQLGPSRA*DQALLI
Trigger: GATCAATAGAGCTTGGTCCCAAGCTCTACTGGGCCC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAAGGATAGCAACCCAGTaGCCTTGCTACCTCCAAGGG +
Preference number: 2 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLRIATQ*PCYLQG
Trigger: CCCTTGGAGGTAGCAAGGCCACTGGGTTGCTATCCT...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCTCAAACACGCCTTCATaGGTAGGCATGTTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFSNTPS*VGMFLL
Trigger: TAAGAGAAACATGCCTACCCATGAAGGCGTGTTTGA...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCCATCAGCAAGATGGTaGTCCCAGTTCCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLPSARW*SQFLAW
Trigger: CCAGGCCAGGAACTGGGACCACCATCTTGCTGATGG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTCTCTTTTGCAGGGTaGGGTGGTCCCTCAAAGATC +
Preference number: 2 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLVSFAG*GGPSKI
Trigger: GATCTTTGAGGGACCACCTCACCCTGCAAAAGAGAC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTCCCAATTTGGCCCTGTaGCAGGCCTGTGGGACCACA +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIPNLAL*QACGTT
Trigger: TGTGGTCCCACAGGCCTGTCACAGGGCCAAATTGGG...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGGCTTTTTCCTGTCCCTaGAGTCAGCACCCAACCGGA +
Preference number: 2 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMAFSCP*SQHPTG
Trigger: TCCGGTTGGGTGCTGACTTCAGGGACAGGAAAAAGC...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGGCTTTTTCCTGTCCCTaGAGTCAGCACCCAACCGGA +
Preference number: 2 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLAFSCP*SQHPTG
Trigger: TCCGGTTGGGTGCTGACTTCAGGGACAGGAAAAAGC...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGAGTGGGCACTCAGGAGTaGGGAGCATGCTGCATCTCT +
Preference number: 2 (lower is better)
Translates to: RFSICREGTSLSEKLFTRVGTQE*GACCIS
Trigger: AGAGATGCAGCATGCTCCTCACTCCTGAGTGCCCAC...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGACTGCTAGTTCCTGCCTaGGGATGTGAACTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: RFSICREGTSLSEKLFTRLLVPA*GCELPS
Trigger: GCTGGGGAGTTCACATCCTCAGGCAGGAACTAGCAG...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGTCTGTGATGCTGACTaGCCGCACAAGACATACCTA +
Preference number: 2 (lower is better)
Translates to: PPDYVILHKGCFLSESQLVCDAD*PHKTYL
Trigger: TAGGTATGTCTTGTGCGGTCAGTCAGCATCACAGAC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTCTCCCAGGACAGCACTaGGCTGTTAGCACAGCTGCC +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGILPGQH*AVSTAA
Trigger: GGCAGCTGTGCTAACAGCTCAGTGCTGTCCTGGGAG...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGAAGCCAACTCCCCTATaGCCAATGGACATTGGTTCT +
Preference number: 2 (lower is better)
Translates to: IHKSLPALCFAASLSQLVKPTPL*PMDIGS
Trigger: AGAACCAATGTCCATTGGGCATAGGGGAGTTGGCTT...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGGAAATCAACTGTCACTaGACGTCAAAGGTAATTTCT +
Preference number: 2 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEEINCH*TSKVIS
Trigger: AGAAATTACCTTTGACGTGCAGTGACAGTTGATTTC...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGCTAGATTCAGCATTTaGAGGGAAGGAACCTCACTT +
Preference number: 2 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGARFSI*REGTSL
Trigger: AAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTAAAGACAATGCAGGATaGTTCGAGGGTTCTGAGTCA +
Preference number: 2 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGKDNAG*FEGSES
Trigger: TGACTCAGAACCCTCGAAGCATCCTGCATTGTCTTT...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCACCCCTTTATGGGATCTaGAGCCTCAGGAATGGACAG +
Preference number: 2 (lower is better)
Translates to: ADLRFGVRKSLSNRACLAPLYGI*SLRNGQ
Trigger: CTGTCCATTCCTGAGGCTCCAGATCCCATAAAGGGG...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCAGAACCAGCACACTTaGAAGATGTTGAACTACCTG +
Preference number: 2 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGQNQHT*KMLNYL
Trigger: CAGGTAGTTCAACATCTTCCAAGTGTGCTGGTTCTG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGTGGTTGCAAACCAGTaGTTGCTATCCCCAGCAAGA +
Preference number: 2 (lower is better)
Translates to: PPDYVILHKGCFLSESQLVVANQ*LLSPAR
Trigger: TCTTGCTGGGGATAGCAACCACTGGTTTGCAACCAC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGCCCAGCCTCACCATATaGCTGGTCATGAGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMPSLTI*LVMSKR
Trigger: CCTCTTGCTCATGACCAGCCATATGGTGAGGCTGGG...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTTCCTGCCTGAGGATGTaGACTCCCCAGCCTCACCAT +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGISCLRM*TPQPHH
Trigger: ATGGTGAGGCTGGGGAGTTCACATCCTCAGGCAGGA...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTCTGCTAGTTCCTGCCTaGGGATGTGAACTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGILLVPA*GCELPS
Trigger: GCTGGGGAGTTCACATCCTCAGGCAGGAACTAGCAG...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCCCTTCCAGCACCTTCTaGTTAGCTGAGACCCTGACG +
Preference number: 2 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIPSSTF*LAETLT
Trigger: CGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGG...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGTCAGCAATCATTTCCTaGTCCCACCCTGGGCTGACA +
Preference number: 2 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLSAIIS*SHPGLT
Trigger: TGTCAGCCCAGGGTGGGAGCAGGAAATGATTGCTGA...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTTTGGTTCTGGCCAAGTaGGAGGTGGGGCTAGAAGAC +
Preference number: 2 (lower is better)
Translates to: FLGISSINYVWVPKQWPGLVLAK*EVGLED
Trigger: GTCTTCTAGCCCCACCTCCCACTTGGCCAGAACCAA...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCTTGGTTCTGGCCAAGTaGGAGGTGGGGCTAGAAGAC +
Preference number: 2 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVILVLAK*EVGLED
Trigger: GTCTTCTAGCCCCACCTCCCACTTGGCCAGAACCAA...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAAAGAGACCCCCTTTATaGGATCTGGAGCCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLKRPPL*DLEPQE
Trigger: TTCCTGAGGCTCCAGATCCCATAAAGGGGGTCTCTT...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCATGGGTGCCTAAACAGTaGCCAGGTGAGCCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: ADLRFGVRKSLSNRACLAWVPKQ*PGEPFL
Trigger: AAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCA...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCTAATAGCCAGTTCCTaGGAGCAATGCAACATCCTT +
Preference number: 2 (lower is better)
Translates to: IHKSLPALCFAASLSQLVLIASS*EQCNIL
Trigger: AAGGATGTTGCATTGCTCCCAGGAACTGGCTATTAG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTCAAGTCTCTCTCAGCTaGTGCAGGGACGGGAGACCT +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIQVSLS*CRDGRP
Trigger: AGGTCTCCCGTCCCTGCACCAGCTGAGAGAGACTTG...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTTCTTCTAGCTCTTTCTaGTTCTGTGGCAGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: PPDYVILHKGCFLSESQLSSSSF*FCGSEG
Trigger: TCCTTCACTGCCACAGAATCAGAAAGAGCTAGAAGA...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGTCTAGAGAAAAGAAGTaGAAATCCTCACCTCCATGG +
Preference number: 2 (lower is better)
Translates to: IHKSLPALCFAASLSQLVSREKK*KSSPPW
Trigger: CCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGA...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCCCTGTGTCACCTCCTaGCTATGTGATCTTGCACAA +
Preference number: 2 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLPCVTS*LCDLAQ
Trigger: TTGTGCAAGATCACATAGTCAGGAGGTGACACAGGG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGCCGGCAGTCAAAGCATaGAGCTGTATAGCTCATGGA +
Preference number: 2 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMPAVKA*SCIAHG
Trigger: TCCATGAGCTATACAGCTGCATGCTTTGACTGCCGG...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCCTCCCCTATGCCCAATaGACATTGGTTCTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVILPYAQ*TLVLAK
Trigger: CTTGGCCAGAACCAATGTCCATTGGGCATAGGGGAG...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTCCCCTTTATGGGATCTaGAGCCTCAGGAATGGACAG +
Preference number: 2 (lower is better)
Translates to: FLGISSINYVWVPKQWPGPLYGI*SLRNGQ
Trigger: CTGTCCATTCCTGAGGCTCCAGATCCCATAAAGGGG...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTCAGAACCAGCACACTTaGAAGATGTTGAACTACCTG +
Preference number: 2 (lower is better)
Translates to: PPDYVILHKGCFLSESQLQNQHT*KMLNYL
Trigger: CAGGTAGTTCAACATCTTCCAAGTGTGCTGGTTCTG...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGTCAAACACGCCTTCATaGGTAGGCATGTTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: IHKSLPALCFAASLSQLVSNTPS*VGMFLL
Trigger: TAAGAGAAACATGCCTACCCATGAAGGCGTGTTTGA...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGTCAAAGGTAATTTCTaGTCACAAGTACAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGVKGNF*SQVQEK
Trigger: TTTCTCCTGTACTTGTGATCAGAAATTACCTTTGAC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTGGGACCAAGCTCTATTaGTCAGCATCCCCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIGTKLY*SASPRV
Trigger: AACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCC...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTACAGAACCAGCACACTTaGAAGATGTTGAACTACCTG +
Preference number: 2 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLQNQHT*KMLNYL
Trigger: CAGGTAGTTCAACATCTTCCAAGTGTGCTGGTTCTG...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGGAGTGCTTGAAAATGTaGGGACTTCAACCAAGCTCC +
Preference number: 2 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLECLKM*GLQPSS
Trigger: GGAGCTTGGTTGAAGTCCCCACATTTTCAAGCACTC...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAGTCCCTCAAAGATCTTaGTGGAGGGGAGGAAGGGCT +
Preference number: 2 (lower is better)
Translates to: SETKPNPETNYQDTEYTLVPQRS*WRGGRA
Trigger: AGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGAC...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGTCTTCTAGCTCTTTCTaGTTCTGTGGCAGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLSSSSF*FCGSEG
Trigger: TCCTTCACTGCCACAGAATCAGAAAGAGCTAGAAGA...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCAGATTCTGGGACCTTaGAATTCACAGAGTTGTTGC +
Preference number: 2 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLQILGP*NSQSCC
Trigger: GCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAAATGGACATTGGTTCTaGCCAAGTGGGAGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: SETKPNPETNYQDTEYTLNGHWF*PSGRWG
Trigger: GCCCCACCTCCCACTTGGCCAGAACCAATGTCCATT...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTAAGAGACCCCCTTTATaGGATCTGGAGCCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIKRPPL*DLEPQE
Trigger: TTCCTGAGGCTCCAGATCCCATAAAGGGGGTCTCTT...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTTGGGTGCCTAAACAGTaGCCAGGTGAGCCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIWVPKQ*PGEPFL
Trigger: AAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCA...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTGTGGTTGCAAACCAGTaGTTGCTATCCCCAGCAAGA +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIVVANQ*LLSPAR
Trigger: TCTTGCTGGGGATAGCAACCACTGGTTTGCAACCAC...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAGTCTCTTTTGCAGGGTaGGGTGGTCCCTCAAAGATC +
Preference number: 2 (lower is better)
Translates to: SETKPNPETNYQDTEYTLVSFAG*GGPSKI
Trigger: GATCTTTGAGGGACCACCTCACCCTGCAAAAGAGAC...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGATTTTGCAGGGTGAGGTaGTCCCTCAAAGATCTTGAT +
Preference number: 2 (lower is better)
Translates to: RFSICREGTSLSEKLFTRFCRVR*SLKDLD
Trigger: ATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAATGCCCAATGGACATTaGTTCTGGCCAAGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SETKPNPETNYQDTEYTLMPNGH*FWPSGR
Trigger: CCTCCCACTTGGCCAGAACCAATGTCCATTGGGCAT...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTACTCCCCTATGCCCAATaGACATTGGTTCTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: SETKPNPETNYQDTEYTLLPYAQ*TLVLAK
Trigger: CTTGGCCAGAACCAATGTCCATTGGGCATAGGGGAG...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGTCCATAAATTATGTCTaGGTGCCTAAACAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLSINYV*VPKQWP
Trigger: TGGCCACTGTTTAGGCACCCAGACATAATTTATGGA...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGTCATGGATCCAAAATTaGGAAGCAGGCATTGGAAAG +
Preference number: 2 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMSWIQN*EAGIGK
Trigger: CTTTCCAATGCCTGCTTCCCAATTTTGGATCCATGA...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTGTGTGTCCAGAAGCCTaGAGTAATCAAACACGCCTT +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIVCPEA*SNQTRL
Trigger: AAGGCGTGTTTGATTACTCCAGGCTTCTGGACACAC...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 90 bp AAGCTTTTTAGCAGGAAGCCTATAAAGGATGAATATCAATGTAACTaGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGAC +
Preference number: 2 (lower is better)
Translates to: KLFSRKPIKDEYQCN*PCCQPLHSLVTEMD
Trigger: GTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAAGTTACATTGATATTCATCCTTTATAGGCTTCCTGCTAAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR GCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGAAATCAACTGTCACTaGACGTCAAAGGTAATTTCT +
Preference number: 2 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLEINCH*TSKVIS
Trigger: AGAAATTACCTTTGACGTGCAGTGACAGTTGATTTC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTCTAATAGCCAGTTCCTaGGAGCAATGCAACATCCTT +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGILIASS*EQCNIL
Trigger: AAGGATGTTGCATTGCTCCCAGGAACTGGCTATTAG...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTTCATGGATCCAAAATTaGGAAGCAGGCATTGGAAAG +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGISWIQN*EAGIGK
Trigger: CTTTCCAATGCCTGCTTCCCAATTTTGGATCCATGA...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTATTTTGCAGGGTGAGGTaGTCCCTCAAAGATCTTGAT +
Preference number: 2 (lower is better)
Translates to: SETKPNPETNYQDTEYTLFCRVR*SLKDLD
Trigger: ATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR TCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTGTCAAAGGTAATTTCTaGTCACAAGTACAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIVKGNF*SQVQEK
Trigger: TTTCTCCTGTACTTGTGATCAGAAATTACCTTTGAC...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 72 bp ACGGGAGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTaGTCTACCACAGTGCTCCTGAGCACACAGTCCCTG +
Preference number: 3 (lower is better)
Translates to: TGDLCLFSRQGQ*STTVLLSTQSL
Trigger: CAGGGACTGTGTGCTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCTCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp CCTTTCTACTGCTGCTTAGAAGGCCCTGGGCCTGACTaGCCTCCACCAAGCAGGAAGGGCTATACACCCTGG +
Preference number: 3 (lower is better)
Translates to: PFYCCLEGPGPD*PPPSRKGYTPW
Trigger: CCAGGGTGTATAGCCCTTCCTGCTTGGTGGAGGCCAGTCAGGCCCAGGGCCTTCTAAGCAGCAGTAGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGAGAGAGGTCATCAGGTaGGGAGGTGGCCATGCCCCT +
Preference number: 3 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEREVIR*GGGHAP
Trigger: AGGGGCATGGCCACCTCCCAACCTGATGACCTCTCT...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 72 bp GCTATCCCCAGCAAGAGGATAGCAACCCAGTGGCCTTaGTACCTCCAAGGGCCCAGTAGAGCTTGGGACCAA +
Preference number: 3 (lower is better)
Translates to: AIPSKRIATQWP*YLQGPSRAWDQ
Trigger: TTGGTCCCAAGCTCTACTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGCTATCCTCTTGCTGGGGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp GTGGTTGCTATCCCCAGCAAGAGGATAGCAACCCAGTaGCCTTGCTACCTCCAAGGGCCCAGTAGAGCTTGG +
Preference number: 3 (lower is better)
Translates to: VVAIPSKRIATQ*PCYLQGPSRAW
Trigger: CCAAGCTCTACTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGCTATCCTCTTGCTGGGGATAGCAACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp TGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTaGTGCAGGGACGGGAGACCTGTGTCTCTTCTCAAG +
Preference number: 3 (lower is better)
Translates to: CQPCALRQVSLS*CRDGRPVSLLK
Trigger: CTTGAGAAGAGACACAGGTCTCCCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTAGAGAGGTCATCAGGTaGGGAGGTGGCCATGCCCCT +
Preference number: 3 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLREVIR*GGGHAP
Trigger: AGGGGCATGGCCACCTCCCAACCTGATGACCTCTCT...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGAGCAACCCAGTGGCCTaGCTACCTCCAAGGGCCCAG +
Preference number: 3 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGSNPVA*LPPRAQ
Trigger: CTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGCT...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp GGGTACTGGAGGACCTGTCTCTTTTGCAGGGTGAGGTaGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GYWRTCLFCRVR*SLKDLDGGEEG
Trigger: CCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAAGAGACAGGTCCTCCAGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp CCCCCAGAGTTTTCACCTGCAGAGAAGCAGGACAGGTaGGCACTCAGGAGTGAGGAGCATGCTGCATCTCTT +
Preference number: 3 (lower is better)
Translates to: PPEFSPAEKQDR*ALRSEEHAASL
Trigger: AAGAGATGCAGCATGCTCCTCACTCCTGAGTGCCCACCTGTCCTGCTTCTCTGCAGGTGAAAACTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp CAGTGGCCTTGCTACCTCCAAGGGCCCAGTAGAGCTTaGGACCAAGCTCTATTGATCAGCATCCCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: QWPCYLQGPSRA*DQALLISIPQS
Trigger: ACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCCAAGCTCTACTGGGCCCTTGGAGGTAGCAAGGCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp GTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATaGTGGTCCCAGTTCCTGGCCTGGCATTGTGTGTTC +
Preference number: 3 (lower is better)
Translates to: VLGHLLFLPSAR*WSQFLAWHCVF
Trigger: GAACACACAATGCCAGGCCAGGAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGAATCCTCTTAGAGCCTaGGTTCAAGTCTTAGCCCTG +
Preference number: 3 (lower is better)
Translates to: SLPALCFAASLSQLVQGRNPLRA*VQVLAL
Trigger: CAGGGCTAAGACTTGAACCAAGGCTCTAAGAGGATT...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 72 bp AGACAGGGTACTGGAGGACCTGTCTCTTTTGCAGGGTaGGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: RQGTGGPVSFAG*GGPSKILMEGR
Trigger: CCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAAGAGACAGGTCCTCCAGTACCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGCAGAACACTGAGTGCTaGAAAATGTGGGGACTTCAA +
Preference number: 3 (lower is better)
Translates to: SLPALCFAASLSQLVQGRQNTEC*KMWGLQ
Trigger: TTGAAGTCCCCACATTTTCAAGCACTCAGTGTTCTG...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGAATCCTCTTAGAGCCTaGGTTCAAGTCTTAGCCCTG +
Preference number: 3 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPENPLRA*VQVLAL
Trigger: CAGGGCTAAGACTTGAACCAAGGCTCTAAGAGGATT...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 72 bp GAGGCATTGCTGGATAAACAACTGCTAGTTCCTGCCTaGGGATGTGAACTCCCCAGCCTCACCATATGGCTG +
Preference number: 3 (lower is better)
Translates to: EALLDKQLLVPA*GCELPSLTIWL
Trigger: CAGCCATATGGTGAGGCTGGGGAGTTCACATCCTCAGGCAGGAACTAGCAGTTGTTTATCCAGCAATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 72 bp AAAAGGATAGCAACCCAGTGGTTGCAAACCAGTGGTTaGTATCCCCAGCAAGAGGATAGCAACCCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: KRIATQWLQTSG*YPQQEDSNPVA
Trigger: GGCCACTGGGTTGCTATCCTCTTGCTGGGGATAGCAACCACTGGTTTGCAACCACTGGGTTGCTATCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp GGTAGAGTAGAAGGGATGGGGAAGAGACCCCCTTTATaGGATCTGGAGCCTCAGGAATGGACAGACCCAATT +
Preference number: 3 (lower is better)
Translates to: GRVEGMGKRPPL*DLEPQEWTDPI
Trigger: AATTGGGTCTGTCCATTCCTGAGGCTCCAGATCCCATAAAGGGGGTCTCTTCCCCATCCCTTCTACTCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGTATGCCCAATGGACATaGGTTCTGGCCAAGTGGGAG +
Preference number: 3 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEYAQWT*VLAKWE
Trigger: CTCCCACTTGGCCAGAACCAATGTCCATTGGGCATA...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTTATGCCCAATGGACATaGGTTCTGGCCAAGTGGGAG +
Preference number: 3 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGYAQWT*VLAKWE
Trigger: CTCCCACTTGGCCAGAACCAATGTCCATTGGGCATA...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCTGACGGCTGGAAGTTaGCCTCACAACCCTATGAGC +
Preference number: 3 (lower is better)
Translates to: IHKSLPALCFAASLSQLVLTAGS*PHNPMS
Trigger: GCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTGGGACCAAGCTCTATaGATCAGCATCCCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGWDQAL*ISIPQS
Trigger: ACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCCA...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGGTCCCTCAAAGATCTaGATGGAGGGGAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLGPSKI*MEGRKG
Trigger: GCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCAGCAATGCAACATCCTaGAGGCATTGCTGGATAAAC +
Preference number: 3 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFSNATS*RHCWIN
Trigger: GTTTATCCAGCAATGCCTCAAGGATGTTGCATTGCT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 72 bp CAGGCTGGTGAGCATCTATGTGTCTGTGATGCTGACTaGCCGCACAAGACATACCTAATAGCCAGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: QAGEHLCVCDAD*PHKTYLIASSW
Trigger: CCAGGAACTGGCTATTAGGTATGTCTTGTGCGGTCAGTCAGCATCACAGACACATAGATGCTCACCAGCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 72 bp TCTGTGCAAGTCATACATAAATCTCTGCCAGCCTTGTaGTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGA +
Preference number: 3 (lower is better)
Translates to: SVQVIHKSLPAL*FAASLSQLVQG
Trigger: TCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTATGACTTGCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTAGAGAGGTCATCAGGTaGGGAGGTGGCCATGCCCCT +
Preference number: 3 (lower is better)
Translates to: FLGISSINYVWVPKQWPGREVIR*GGGHAP
Trigger: AGGGGCATGGCCACCTCCCAACCTGATGACCTCTCT...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGATAGCAACCCAGTGGTaGCAAACCAGTGGTTGCTAT +
Preference number: 3 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGIATQW*QTSGCY
Trigger: ATAGCAACCACTGGTTTGCAACCACTGGGTTGCTAT...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCAACATCCTTGAGGCATaGCTGGATAAACAACTGCTA +
Preference number: 3 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFNILEA*LDKQLL
Trigger: TAGCAGTTGTTTATCCAGCAATGCCTCAAGGATGTT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 72 bp TTAGTGAAGATGATGGTGGGTAAAGACAATGCAGGATaGTTCGAGGGTTCTGAGTCAGAGGACTCCCAGGAC +
Preference number: 3 (lower is better)
Translates to: LVKMMVGKDNAG*FEGSESEDSQD
Trigger: GTCCTGGGAGTCCTCTGACTCAGAACCCTCGAAGCATCCTGCATTGTCTTTACCCACCATCATCTTCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTGAATATCAATGTAACTaGCCCTGCTGTCAACCTCTG +
Preference number: 3 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGEYQCN*PCCQPL
Trigger: CAGAGGTTGACAGCAGGGCAAGTTACATTGATATTC...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 72 bp GTTCAAGTCTTAGCCCTGTGTCACCTCCTGACTATGTaGTCTTGCACAAGGGATGCTTCCTCTCTGAATCTC +
Preference number: 3 (lower is better)
Translates to: VQVLALCHLLTM*SCTRDASSLNL
Trigger: GAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGGTGACACAGGGCTAAGACTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGTATGCCCAATGGACATaGGTTCTGGCCAAGTGGGAG +
Preference number: 3 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLYAQWT*VLAKWE
Trigger: CTCCCACTTGGCCAGAACCAATGTCCATTGGGCATA...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCTCATGGATCCAAAATaGGGAAGCAGGCATTGGAAA +
Preference number: 3 (lower is better)
Translates to: IHKSLPALCFAASLSQLVLMDPK*GSRHWK
Trigger: TTTCCAATGCCTGCTTCCCAATTTTGGATCCATGAG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGGAATATCAATGTAACTaGCCCTGCTGTCAACCTCTG +
Preference number: 3 (lower is better)
Translates to: IHKSLPALCFAASLSQLVEYQCN*PCCQPL
Trigger: CAGAGGTTGACAGCAGGGCAAGTTACATTGATATTC...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 72 bp GTTAGCACAGCTGCCAGAGGCAGAACACTGAGTGCTTaGAAATGTGGGGACTTCAACCAAGCTCCTATTTTT +
Preference number: 3 (lower is better)
Translates to: VSTAARGRTLSA*KCGDFNQAPIF
Trigger: AAAAATAGGAGCTTGGTTGAAGTCCCCACATTTTCAAGCACTCAGTGTTCTGCCTCTGGCAGCTGTGCTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR-3UTR CAA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAGGTCCCTCAAAGATCTaGATGGAGGGGAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: SETKPNPETNYQDTEYTLGPSKI*MEGRKG
Trigger: GCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACC...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 72 bp CACAAGACATACCTAATAGCCAGTTCCTGGGAGCAATaGAACATCCTTGAGGCATTGCTGGATAAACAACTG +
Preference number: 3 (lower is better)
Translates to: HKTYLIASSWEQ*NILEALLDKQL
Trigger: CAGTTGTTTATCCAGCAATGCCTCAAGGATGTTGCATTGCTCCCAGGAACTGGCTATTAGGTATGTCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp ATCCTCACCTCCATGGGATGTGAGTATAGAATGAGATaGGGCACATGGCAAGCCTTTGAAAGCCATGAAATT +
Preference number: 3 (lower is better)
Translates to: ILTSMGCEYRMR*GTWQAFESHEI
Trigger: AATTTCATGGCTTTCAAAGGCTTGCCATGTGCCCCATCTCATTCTATACTCACATCCCATGGAGGTGAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp GGCACATTTTTAGGCATTTCGTCCATAAATTATGTCTaGGTGCCTAAACAGTGGCCAGGTGAGCCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: GTFLGISSINYV*VPKQWPGEPFL
Trigger: AAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAATGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR TCA 72 bp ATGAATAAAACATGTAAGACATTCTTGACCCCACAGTaGTCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGT +
Preference number: 3 (lower is better)
Translates to: MNKTCKTFLTPQ*SLKSAQSLTQG
Trigger: ACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGATCACTGTGGGGTCAAGAATGTCTTACATGTTTTATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 72 bp GAAGAAGCAAGATTAATTTTTCCGGCAGTCAAAGCATaGAGCTGTATAGCTCATGGATCCAAAATTGGGAAG +
Preference number: 3 (lower is better)
Translates to: EEARLIFPAVKA*SCIAHGSKIGK
Trigger: CTTCCCAATTTTGGATCCATGAGCTATACAGCTGCATGCTTTGACTGCCGGAAAAATTAATCTTGCTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR GCA 72 bp AGGGTAGAGTATGTGAGAAGGCAGATTCTGGGACCTTaGAATTCACAGAGTTGTTGCAATAAGATTGGAATT +
Preference number: 3 (lower is better)
Translates to: RVEYVRRQILGP*NSQSCCNKIGI
Trigger: AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCTTCTCACATACTCTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CCA 72 bp GTGATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTaGATCTTCAGGAAATATTTGTTGCTTCAATACATT +
Preference number: 3 (lower is better)
Translates to: VISKVSSKPHPG*IFRKYLLLQYI
Trigger: AATGTATTGAAGCAACAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCGCGGGCCGGCAGCTGTaGTCTCCAAGGTCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIRLGGGHAAGRQL*SPRSAP
Trigger: CGGCGCAGACCTTGGAGAGCACAGCTGCCGGCCCGC...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 72 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTaGGGAGGTGGCCATGCCCCTTCTGGCCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIR*GGGHAPSGQGP
Trigger: GGGTCCCTGGCCAGAAGGGGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCCCCAATTTGGCCCTGTaGCAGGCCTGTGGGACCACA +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIRLGGGHAPNLAL*QACGTT
Trigger: TGTGGTCCCACAGGCCTGTCACAGGGCCAAATTGGG...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGGCGGGCCGGCAGCTGTaGTCTCCAAGGTCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEAGRQL*SPRSAP
Trigger: CGGCGCAGACCTTGGAGAGCACAGCTGCCGGCCCGC...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGACGGTCGCCGGGTCGCTaGATGGCTCCGAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRRSPGR*MAPSLG
Trigger: GCCGAGGCTCGGAGCCATCCAGCGACCCGGCGACCG...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCAGGATAGCAACCCAGTaGCCTTGCTACCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIRLGGGHARIATQ*PCYLQG
Trigger: CCCTTGGAGGTAGCAAGGCCACTGGGTTGCTATCCT...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTGCATCTCCAGGCGCGTaGTGCGCCCGTCGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLASPGA*CARRRP
Trigger: TGGACGGCGACGGGCGCATCACGCGCCTGGAGATGC...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGCTCCCAGGACAGCACTaGGCTGTTAGCACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRLPGQH*AVSTAA
Trigger: GGCAGCTGTGCTAACAGCTCAGTGCTGTCCTGGGAG...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGGTGCTCTCCAAGGTCTaGGCCGGAGCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEVLSKV*AGAAFQ
Trigger: CTGGAAGGCGGCTCCGGCGCAGACCTTGGAGAGCAC...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGGCAACCCAGTGGCCTTaGTACCTCCAAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRATQWP*YLQGPS
Trigger: ACTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGC...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGCGGTCGCCGGGTCGCTaGATGGCTCCGAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREERSPGR*MAPSLG
Trigger: GCCGAGGCTCGGAGCCATCCAGCGACCCGGCGACCG...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCTCAGCTCCTGCTCGCTaGACTCAGTGTTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIRLGGGHASAPAR*TQCSEQ
Trigger: TTGTTCAGAACACTGAGTTCAGCGAGCAGGAGCTGA...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTCACGCTGCTGGGGCGTaGGCCCGTCCTGGTTCATGC +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLHAAGA*ARPGSC
Trigger: GCATGAACCAGGACGGGCTCACGCCCCAGCAGCGTG...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCGTCTGTGATGCTGACTaGCCGCACAAGACATACCTA +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIRLGGGHAVCDAD*PHKTYL
Trigger: TAGGTATGTCTTGTGCGGTCAGTCAGCATCACAGAC...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCGGGATGCTTCCTCTCTaGATCTCAGCTTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIRLGGGHAGMLPL*ISASKS
Trigger: AGACTTGGAAGCTGAGATTCAGAGAGGAAGCATCCC...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAGTGCTCTCCAAGGTCTaGGCCGGAGCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRVLSKV*AGAAFQ
Trigger: CTGGAAGGCGGCTCCGGCGCAGACCTTGGAGAGCAC...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGTCAAGGCAGGGCCAGTaGTCTACCACAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRSRQGQ*STTVLL
Trigger: CAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGA...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTGGTGGGCTCTTCAGTTaGTGCCGCCTGAGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSGGLFS*CRLRPV
Trigger: GACCGGCCTCAGGCGGCAGCAACTGAAGAGCCCACC...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGATTGTCCACACGCTGCTaGGGCGTGAGCCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRLSTRC*GVSPSW
Trigger: CCAGGACGGGCTCACGCCCCAGCAGCGTGTGGACAA...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGCAAGTCTCTCTCAGCTaGTGCAGGGACGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRQVSLS*CRDGRP
Trigger: AGGTCTCCCGTCCCTGCACCAGCTGAGAGAGACTTG...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGCACGCTGCTGGGGCGTaGGCCCGTCCTGGTTCATGC +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEHAAGA*ARPGSC
Trigger: GCATGAACCAGGACGGGCTCACGCCCCAGCAGCGTG...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTGTGCTCTCCAAGGTCTaGGCCGGAGCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLVLSKV*AGAAFQ
Trigger: CTGGAAGGCGGCTCCGGCGCAGACCTTGGAGAGCAC...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGGTCTCTCTCAGCTGGTaGAGGGACGGGAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEVSLSW*RDGRPV
Trigger: CACAGGTCTCCCGTCCCTGCACCAGCTGAGAGAGAC...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTGGCAGGCCCAGTCCTaGCCCCACACTCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSWQAQS*PHTLAK
Trigger: CTTTGCCAGAGTGTGGGGGCAGGACTGGGCCTGCCA...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCGGGCCAGCTTGCTGTTaGTCTTCCCCATGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIGPACC*SSPWRG
Trigger: GCCCCGCCATGGGGAAGACCAACAGCAAGCTGGCCC...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGTGCAGGAGCATGTCCTaGGCCACCTGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRCRSMS*ATCCSF
Trigger: GAAGGAACAACAGGTGGCCCAGGACATGCTCCTGCA...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTCTCCTGCCCAGGGGTaGGCTCTTCAGTTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSSPAQG*ALQLLP
Trigger: CGGCAGCAACTGAAGAGCCCACCCCTGGGCAGGAGA...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS-3UTR TCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCACGCTGCTGGGGCGTaGGCCCGTCCTGGTTCATGC +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVHAAGA*ARPGSC
Trigger: GCATGAACCAGGACGGGCTCACGCCCCAGCAGCGTG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGGAAGAAAGGACTGAATaGACGCTCCAAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGREERTE*TLQRLG
Trigger: CCCCAGCCTTTGGAGCGTTCATTCAGTCCTTTCTTC...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGAGCAGCAAAAACTGCTaGGAGTGGCAGCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRSSKNC*EWQLRT
Trigger: AGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTGCT...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGGTGGGCACTCAGGAGTaGGGAGCATGCTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEVGTQE*GACCIS
Trigger: AGAGATGCAGCATGCTCCTCACTCCTGAGTGCCCAC...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTATCAGTTGCTGCCGCCTaGGGCCGGTCGCCGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLSVAAA*GRSPGR
Trigger: GCGACCCGGCGACCGGCCTCAGGCGGCAGCAACTGA...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCAAGGTGCGGAAAGCGTaGTGCGCGAACTTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFKVRKA*CANLEA
Trigger: CGCCTCCAAGTTCGCGCAGCACGCTTTCCGCACCTT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR GCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCATCTTGTCCACACGCTaGTGGGGCGTGAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIILSTR*WGVSPS
Trigger: GGACGGGCTCACGCCCCAGCAGCGTGTGGACAAGAT...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGTCAAGGCAGGGCCAGTaGTCTACCACAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPESRQGQ*STTVLL
Trigger: CAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGA...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAGTCTCTCTCAGCTGGTaGAGGGACGGGAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRVSLSW*RDGRPV
Trigger: CACAGGTCTCCCGTCCCTGCACCAGCTGAGAGAGAC...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTTGTTGGTCTTCCCCATaGCGGGGCCTGAGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGCWSSP*RGLRPV
Trigger: GACCGGCCTCAGGCCCCGCCATGGGGAAGACCAACA...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000612703.3
CDS-3UTR CCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTTGTCCACACGCTGCTaGGGCGTGAGCCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGLSTRC*GVSPSW
Trigger: CCAGGACGGGCTCACGCCCCAGCAGCGTGTGGACAA...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCGAGTGTCCCTCCTCCTaGGAGGCCAGCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIECPSS*EASQRG
Trigger: ACCTCTCTGGCTGGCCTCCCAGGAGGAGGGACACTC...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCAGCAAAAATCACCCATaGGTATGTGTGTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIRLGGGHASKNHP*VCVSRS
Trigger: GCTTCTGGACACACATACCCATGGGTGATTTTTGCT...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCAAGCCTCACCCAGGGTaGATCTTCAGGAAATATTTG +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIRLGGGHAKPHPG*IFRKYL
Trigger: CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTT...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCCGACAGGGCGCAGATaGACTCCCGGAAGTCGATGG +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGPTGRR*TPGSRW
Trigger: CCATCGACTTCCGGGAGTTCATCTGCGCCCTGTCGG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR TCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGCCGACAGGGCGCAGATaGACTCCCGGAAGTCGATGG +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGPTGRR*TPGSRW
Trigger: CCATCGACTTCCGGGAGTTCATCTGCGCCCTGTCGG...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR TCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTCACCTTCTGCTTAGCTaGGACCCTGACGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSHLLLS*DPDGWK
Trigger: CTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTG...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCTCCTGCCTGAGGATGTaGACTCCCCAGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFSCLRM*TPQPHH
Trigger: ATGGTGAGGCTGGGGAGTTCACATCCTCAGGCAGGA...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGACCAGCTTCTACTTCTaGATGTCACACTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRTSFYF*MSHCSS
Trigger: GCTGCTGCAGTGTGACATGCAGAAGTAGAAGCTGGT...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGGCCAGCCTTGTGCTTTaGGGCAAGTCTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEASLVL*GKSLSA
Trigger: AGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGC...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCGGCGTGAGCCCGTCCTaGTTCATGCGCATCATGATC +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFGVSPS*FMRIMI
Trigger: GATCATGATGCGCATGAACCAGGACGGGCTCACGCC...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGAAGAGACCCCCTTTATaGGATCTGGAGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRKRPPL*DLEPQE
Trigger: TTCCTGAGGCTCCAGATCCCATAAAGGGGGTCTCTT...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTCCATCAGCAAGATGGTaGTCCCAGTTCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSPSARW*SQFLAW
Trigger: CCAGGCCAGGAACTGGGACCACCATCTTGCTGATGG...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGCTTCCATCAGCAAGATaGTGGTCCCAGTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPELPSAR*WSQFLA
Trigger: GGCCAGGAACTGGGACCACCATCTTGCTGATGGAAG...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCCTGAAAGGACTAAAGTaGCCATCTGAAGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: PPPGRPAREVIRLGGGHALKGLK*PSEVAF
Trigger: AAAGGCTACTTCAGATGGCCACTTTAGTCCTTTCAG...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGAAGGGCTATACACCCTaGCAGGCCCAGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGKGYTP*QAQSCP
Trigger: GGGGCAGGACTGGGCCTGCCAGGGTGTATAGCCCTT...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTGAAACTCCTCCAGGTTaGGGATGCCGCTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGETPPG*GCRWGS
Trigger: ACTGCCCCAGCGGCATCCTCAACCTGGAGGAGTTTC...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGCGTAGGGGAAGAACTTaGTGTAGAGCTGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRRRGRT*CRAAET
Trigger: AGTTTCAGCAGCTCTACATCAAGTTCTTCCCCTACG...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR TCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCGCTTTTTCCTGTCCCTaGAGTCAGCACCCAACCGGA +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFAFSCP*SQHPTG
Trigger: TCCGGTTGGGTGCTGACTTCAGGGACAGGAAAAAGC...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTCCTTCCAGCACCTTCTaGTTAGCTGAGACCCTGACG +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSPSSTF*LAETLT
Trigger: CGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGG...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCTCTCTTTCCTGCAGATaGAATTCCCCTGCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRISLSCR*NSPAPG
Trigger: GCCCGGGGCAGGGGAATTGCATCTGCAGGAAAGAGA...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTGTCAGCTTACTACCCTaGCTGGAGACCCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSVSLLP*LETPAS
Trigger: AGAAGCTGGGGTCTCCAGGCAGGGTAGTAAGCTGAC...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAGTCAGCTTACTACCCTaGCTGGAGACCCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRVSLLP*LETPAS
Trigger: AGAAGCTGGGGTCTCCAGGCAGGGTAGTAAGCTGAC...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTGAAGGCGACACTATTTaGATAAGCCCCGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSEGDTI*ISPAPS
Trigger: GGATGGGGCGGGGCTTATGCAAATAGTGTCGCCTTC...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGACGGTCGCCGGGTCGCTaGATGGCTCCGAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRRSPGR*MAPSLG
Trigger: GCCGAGGCTCGGAGCCATCCAGCGACCCGGCGACCG...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGCAGCAACACAATGGATaGGTCACTCTTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEQQHNG*VTLGCL
Trigger: GAGGCAGCCAAGAGTGACCCATCCATTGTGTTGCTG...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGCATCAGGTTGGGAGGTaGCCATGCCCCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEHQVGR*PCPFWP
Trigger: TGGCCAGAAGGGGCATGGCCACCTCCCAACCTGATG...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGATTGGTTCTGGCCAAGTaGGAGGTGGGGCTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRLVLAK*EVGLED
Trigger: GTCTTCTAGCCCCACCTCCCACTTGGCCAGAACCAA...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGACTTAACCTCACCTCCTaGGGCAAAAGCCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRLNLTS*GKSQLP
Trigger: GGGGAGTTGGCTTTTGCCCCAGGAGGTGAGGTTAAG...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCTTAACCTCACCTCCTaGGGCAAAAGCCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFLNLTS*GKSQLP
Trigger: GGGGAGTTGGCTTTTGCCCCAGGAGGTGAGGTTAAG...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCTTCCATCAGCAAGATaGTGGTCCCAGTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFLPSAR*WSQFLA
Trigger: GGCCAGGAACTGGGACCACCATCTTGCTGATGGAAG...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCGCATCTCCAGGCGCGTaGTGCGCCCGTCGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIASPGA*CARRRP
Trigger: TGGACGGCGACGGGCGCATCACGCGCCTGGAGATGC...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGTCTTCTAGCTCTTTCTaGTTCTGTGGCAGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRSSSSF*FCGSEG
Trigger: TCCTTCACTGCCACAGAATCAGAAAGAGCTAGAAGA...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTGTGGGCACTCAGGAGTaGGGAGCATGCTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGVGTQE*GACCIS
Trigger: AGAGATGCAGCATGCTCCTCACTCCTGAGTGCCCAC...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTTCCTGCCTGAGGATGTaGACTCCCCAGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGSCLRM*TPQPHH
Trigger: ATGGTGAGGCTGGGGAGTTCACATCCTCAGGCAGGA...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGTCCTGCCTGAGGATGTaGACTCCCCAGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREESCLRM*TPQPHH
Trigger: ATGGTGAGGCTGGGGAGTTCACATCCTCAGGCAGGA...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCTGCTAGTTCCTGCCTaGGGATGTGAACTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGLLVPA*GCELPS
Trigger: GCTGGGGAGTTCACATCCTCAGGCAGGAACTAGCAG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTATCTTGTCCACACGCTaGTGGGGCGTGAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLILSTR*WGVSPS
Trigger: GGACGGGCTCACGCCCCAGCAGCGTGTGGACAAGAT...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCCCTTCCAGCACCTTCTaGTTAGCTGAGACCCTGACG +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIPSSTF*LAETLT
Trigger: CGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGG...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCGCTGCATCTCTTTCCTaGAGATGCAATTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFAASLS*RCNSPA
Trigger: GGCAGGGGAATTGCATCTGCAGGAAAGAGATGCAGC...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGAAAGACAATGCAGGATaGTTCGAGGGTTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRKDNAG*FEGSES
Trigger: TGACTCAGAACCCTCGAAGCATCCTGCATTGTCTTT...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTCTCTGCCAGCCTTGTaGTTTGCGGCAAGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSSLPAL*FAASLS
Trigger: AGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGATCTCTGCCAGCCTTGTaGTTTGCGGCAAGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRSLPAL*FAASLS
Trigger: AGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCGTCAGCTTACTACCCTaGCTGGAGACCCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIVSLLP*LETPAS
Trigger: AGAAGCTGGGGTCTCCAGGCAGGGTAGTAAGCTGAC...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTTGGCAGGCCCAGTCCTaGCCCCACACTCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLWQAQS*PHTLAK
Trigger: CTTTGCCAGAGTGTGGGGGCAGGACTGGGCCTGCCA...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTGAAGGCGACACTATTTaGATAAGCCCCGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLEGDTI*ISPAPS
Trigger: GGATGGGGCGGGGCTTATGCAAATAGTGTCGCCTTC...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGGGGCTCTTCAGTTGCTaGCGCCTGAGGCCGGTCGCC +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLGLFSC*RLRPVA
Trigger: GGCGACCGGCCTCAGGCGGCAGCAACTGAAGAGCCC...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAATAAGTAGGCGGCTCTaGCTCCTTCTCTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRISRRL*LLLCTH
Trigger: ATGGGTGCAGAGAAGGAGGCAGAGCCGCCTACTTAT...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS-3UTR CCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGGGCCAGCTTGCTGTTaGTCTTCCCCATGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLGPACC*SSPWRG
Trigger: GCCCCGCCATGGGGAAGACCAACAGCAAGCTGGCCC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGGGCGTGAGCCCGTCCTaGTTCATGCGCATCATGATC +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEGVSPS*FMRIMI
Trigger: GATCATGATGCGCATGAACCAGGACGGGCTCACGCC...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCAGCAACACAATGGATaGGTCACTCTTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFQQHNG*VTLGCL
Trigger: GAGGCAGCCAAGAGTGACCCATCCATTGTGTTGCTG...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCATCAGGTTGGGAGGTaGCCATGCCCCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVHQVGR*PCPFWP
Trigger: TGGCCAGAAGGGGCATGGCCACCTCCCAACCTGATG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGACTCCCCTATGCCCAATaGACATTGGTTCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRLPYAQ*TLVLAK
Trigger: CTTGGCCAGAACCAATGTCCATTGGGCATAGGGGAG...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTCCCAGCCTCACCATATaGCTGGTCATGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLPSLTI*LVMSKR
Trigger: CCTCTTGCTCATGACCAGCCATATGGTGAGGCTGGG...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCCCCAGCCTCACCATATaGCTGGTCATGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIPSLTI*LVMSKR
Trigger: CCTCTTGCTCATGACCAGCCATATGGTGAGGCTGGG...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCTGCAGGAGCATGTCCTaGGCCACCTGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRICRSMS*ATCCSF
Trigger: GAAGGAACAACAGGTGGCCCAGGACATGCTCCTGCA...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGGCCCTGGGCCTGACTaGCCTCCACCAAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLGPGPD*PPPSRK
Trigger: CTTCCTGCTTGGTGGAGGCCAGTCAGGCCCAGGGCC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGAGGGCCTGGACTGAGGTaGGGGGTCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRGPGLR*GVSCPG
Trigger: CCCTGGGCAGGAGACCCCCCACCTCAGTCCAGGCCC...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617690.2
3UTR CAA 72 bp ACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTaGCCTCACAACCCTATGAGCTTCCAGAGGGCACAA +
Preference number: 4 (lower is better)
Translates to: TFCLAETLTAGS*PHNPMSFQRAQ
Trigger: TTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 72 bp TGCAAGTCATACATAAATCTCTGCCAGCCTTGTGCTTaGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: CKSYINLCQPCA*RQVSLSWCRDG
Trigger: CCCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTATGACTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCTCAGCTCCTGCTCGCTaGACTCAGTGTTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFSAPAR*TQCSEQ
Trigger: TTGTTCAGAACACTGAGTTCAGCGAGCAGGAGCTGA...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGATCAGCTCCTGCTCGCTaGACTCAGTGTTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRSAPAR*TQCSEQ
Trigger: TTGTTCAGAACACTGAGTTCAGCGAGCAGGAGCTGA...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTGTCCCTCAAAGATCTTaGTGGAGGGGAGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGVPQRS*WRGGRA
Trigger: AGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGAC...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCGAAGAAAGGACTGAATaGACGCTCCAAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIEERTE*TLQRLG
Trigger: CCCCAGCCTTTGGAGCGTTCATTCAGTCCTTTCTTC...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGCTTTTTCCTGTCCCTaGAGTCAGCACCCAACCGGA +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGAFSCP*SQHPTG
Trigger: TCCGGTTGGGTGCTGACTTCAGGGACAGGAAAAAGC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGACCCTGTGTCACCTCCTaGCTATGTGATCTTGCACAA +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRPCVTS*LCDLAQ
Trigger: TTGTGCAAGATCACATAGTCAGGAGGTGACACAGGG...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAACCAGCTTCTACTTCTaGATGTCACACTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRTSFYF*MSHCSS
Trigger: GCTGCTGCAGTGTGACATGCAGAAGTAGAAGCTGGT...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGAGGACCTGTCTCTTTTaGAGGGTGAGGTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREERTCLF*RVRWSL
Trigger: GAGGGACCACCTCACCCTGCAAAAGAGACAGGTCCT...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGCCTTCCAGCACCTTCTaGTTAGCTGAGACCCTGACG +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGPSSTF*LAETLT
Trigger: CGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGG...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCCGGCAGTCAAAGCATaGAGCTGTATAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFPAVKA*SCIAHG
Trigger: TCCATGAGCTATACAGCTGCATGCTTTGACTGCCGG...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCAATGTAACTTGCCCTaGTGTCAACCTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFQCNLP*CQPLHS
Trigger: GCTGTGCAGAGGTTGACAGCAGGGCAAGTTACATTG...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGTCAAGGCAGGGCCAGTaGTCTACCACAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVSRQGQ*STTVLL
Trigger: CAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGA...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGTCTCTCTCAGCTGGTaGAGGGACGGGAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLVSLSW*RDGRPV
Trigger: CACAGGTCTCCCGTCCCTGCACCAGCTGAGAGAGAC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGGCCAGCCTTGTGCTTTaGGGCAAGTCTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEASLVL*GKSLSA
Trigger: AGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGC...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGTCCTCCAATGTAATCTaGTCGTCCTTATCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPESSNVI*SSLSWS
Trigger: GGACCAGGATAAGGACGACCAGATTACATTGGAGGA...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCAGAGTGTCCCTCCTCCTaGGAGGCCAGCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ADLRFGVRKSLSNRACLAECPSS*EASQRG
Trigger: ACCTCTCTGGCTGGCCTCCCAGGAGGAGGGACACTC...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTTGGTTCTGGCCAAGTaGGAGGTGGGGCTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGLVLAK*EVGLED
Trigger: GTCTTCTAGCCCCACCTCCCACTTGGCCAGAACCAA...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGATGGGTGCCTAAACAGTaGCCAGGTGAGCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRWVPKQ*PGEPFL
Trigger: AAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCA...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTGGGTGCCTAAACAGTaGCCAGGTGAGCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSWVPKQ*PGEPFL
Trigger: AAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCA...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTGTGGTTGCAAACCAGTaGTTGCTATCCCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSVVANQ*LLSPAR
Trigger: TCTTGCTGGGGATAGCAACCACTGGTTTGCAACCAC...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGCTGAAAGGACTAAAGTaGCCATCTGAAGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SLPALCFAASLSQLVQGRLKGLK*PSEVAF
Trigger: AAAGGCTACTTCAGATGGCCACTTTAGTCCTTTCAG...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAAAGGGCTATACACCCTaGCAGGCCCAGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLKGYTP*QAQSCP
Trigger: GGGGCAGGACTGGGCCTGCCAGGGTGTATAGCCCTT...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGGGCCCTGGGCCTGACTaGCCTCCACCAAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLGPGPD*PPPSRK
Trigger: CTTCCTGCTTGGTGGAGGCCAGTCAGGCCCAGGGCC...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGAAACTCCTCCAGGTTaGGGATGCCGCTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLETPPG*GCRWGS
Trigger: ACTGCCCCAGCGGCATCCTCAACCTGGAGGAGTTTC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGGGTTCATGCGCATCATaGTCACGGTGCCCACCATCT +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVGSCAS*SRCPPS
Trigger: AGATGGTGGGCACCGTGATCATGATGCGCATGAACC...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGTCTCTTTTGCAGGGTaGGGTGGTCCCTCAAAGATC +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGVSFAG*GGPSKI
Trigger: GATCTTTGAGGGACCACCTCACCCTGCAAAAGAGAC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCACCCAATTTGGCCCTGTaGCAGGCCTGTGGGACCACA +
Preference number: 4 (lower is better)
Translates to: ADLRFGVRKSLSNRACLAPNLAL*QACGTT
Trigger: TGTGGTCCCACAGGCCTGTCACAGGGCCAAATTGGG...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGGCTTTTTCCTGTCCCTaGAGTCAGCACCCAACCGGA +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVAFSCP*SQHPTG
Trigger: TCCGGTTGGGTGCTGACTTCAGGGACAGGAAAAAGC...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCCTGATTCTGTGGCAGTaGAGGAACAAGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFLILWQ*RNKSSS
Trigger: AGAACTGGACTTGTTCCTTCACTGCCACAGAATCAG...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTGGGACCAAGCTCTATTaGTCAGCATCCCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGGTKLY*SASPRV
Trigger: AACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCC...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCACTACCACAGTGCTCCTaGGCACACAGTCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ADLRFGVRKSLSNRACLALPQCS*AHSPWD
Trigger: GTCCCAGGGACTGTGTGCTCAGGAGCACTGTGGTAG...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGTTCTTGACCCCACAGTaGTCTCTAAAGTCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEFLTPQ*SLKSAQ
Trigger: TTGAGCTGACTTTAGAGATCACTGTGGGGTCAAGAA...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTCACACAGCACAGGGTTaGGCAGTGAGGGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLHTAQG*AVRAVT
Trigger: AGTGACTGCCCTCACTGCTCAACCCTGTGCTGTGTG...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGGCCCAGTTGAGCTTCTaGTCGAAGCTGCCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMAQLSF*SKLPRE
Trigger: CTCCCGCGGCAGCTTCGAGCAGAAGCTCAACTGGGC...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGATCTTGTCCACACGCTaGTGGGGCGTGAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMILSTR*WGVSPS
Trigger: GGACGGGCTCACGCCCCAGCAGCGTGTGGACAAGAT...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTCCGGCAGTCAAAGCATaGAGCTGTATAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLPAVKA*SCIAHG
Trigger: TCCATGAGCTATACAGCTGCATGCTTTGACTGCCGG...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGCCCAGAGTTTTCACCTaGAGAGAAGCAGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEPRVFT*REAGQV
Trigger: CACCTGTCCTGCTTCTCTGCAGGTGAAAACTCTGGG...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCTTGCAAACCAGTGGTTaGTATCCCCAGCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFLQTSG*YPQQED
Trigger: ATCCTCTTGCTGGGGATAGCAACCACTGGTTTGCAA...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTTGCAAACCAGTGGTTaGTATCCCCAGCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSLQTSG*YPQQED
Trigger: ATCCTCTTGCTGGGGATAGCAACCACTGGTTTGCAA...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTAGTTCCTGGGAGCAATaGAACATCCTTGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSSSWEQ*NILEAL
Trigger: CAATGCCTCAAGGATGTTGCATTGCTCCCAGGAACT...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCCTCCTTTCTACTGCTaGTTAGAAGGCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVPPFYC*LEGPGP
Trigger: AGGCCCAGGGCCTTCTAAGCAGCAGTAGAAAGGAGG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTTGTTGGTCTTCCCCATaGCGGGGCCTGAGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGCWSSP*RGLRPV
Trigger: GACCGGCCTCAGGCCCCGCCATGGGGAAGACCAACA...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000612703.3
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGGCAGCAGCAACACAATaGATGGGTCACTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEAAATQ*MGHSWL
Trigger: CAGCCAAGAGTGACCCATCCATTGTGTTGCTGCTGC...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCACATCAGGTTGGGAGGTaGCCATGCCCCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ADLRFGVRKSLSNRACLAHQVGR*PCPFWP
Trigger: TGGCCAGAAGGGGCATGGCCACCTCCCAACCTGATG...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTATGCCCAATGGACATTaGTTCTGGCCAAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGMPNGH*FWPSGR
Trigger: CCTCCCACTTGGCCAGAACCAATGTCCATTGGGCAT...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCTCCCCTATGCCCAATaGACATTGGTTCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGLPYAQ*TLVLAK
Trigger: CTTGGCCAGAACCAATGTCCATTGGGCATAGGGGAG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCTGGGTGCCTAAACAGTaGCCAGGTGAGCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIWVPKQ*PGEPFL
Trigger: AAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCA...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTATGAGATGGGGCACATaGCAAGCCTTTGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSMRWGT*QAFESH
Trigger: ATGGCTTTCAAAGGCTTGCCATGTGCCCCATCTCAT...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTGTGTGTCCAGAAGCCTaGAGTAATCAAACACGCCTT +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSVCPEA*SNQTRL
Trigger: AAGGCGTGTTTGATTACTCCAGGCTTCTGGACACAC...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTCAAGTCTCTCTCAGCTaGTGCAGGGACGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLQVSLS*CRDGRP
Trigger: AGGTCTCCCGTCCCTGCACCAGCTGAGAGAGACTTG...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCCTGGTCCATCTTCTTaGAGATCTTGTCCACACGCT +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGPGPSS*RSCPHA
Trigger: AGCGTGTGGACAAGATCTTCAAGAAGATGGACCAGG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGAGCAGCAAAAACTGCTaGGAGTGGCAGCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVSSKNC*EWQLRT
Trigger: AGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTGCT...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGGGGACCAAGCTCTATTaGTCAGCATCCCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVGTKLY*SASPRV
Trigger: AACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCC...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGTCTAGAGAAAAGAAGTaGAAATCCTCACCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPESREKK*KSSPPW
Trigger: CCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGA...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGCCCTGTGTCACCTCCTaGCTATGTGATCTTGCACAA +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEPCVTS*LCDLAQ
Trigger: TTGTGCAAGATCACATAGTCAGGAGGTGACACAGGG...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAAGAACACTGAGTGCTTaGAAATGTGGGGACTTCAAC +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTRRTLSA*KCGDFN
Trigger: GTTGAAGTCCCCACATTTTCAAGCACTCAGTGTTCT...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGCTCCCAGGACAGCACTaGGCTGTTAGCACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMLPGQH*AVSTAA
Trigger: GGCAGCTGTGCTAACAGCTCAGTGCTGTCCTGGGAG...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCTACCACAGTGCTCCTaGGCACACAGTCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLLPQCS*AHSPWD
Trigger: GTCCCAGGGACTGTGTGCTCAGGAGCACTGTGGTAG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTTCTTGACCCCACAGTaGTCTCTAAAGTCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSFLTPQ*SLKSAQ
Trigger: TTGAGCTGACTTTAGAGATCACTGTGGGGTCAAGAA...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTACACACAGCACAGGGTTaGGCAGTGAGGGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLHTAQG*AVRAVT
Trigger: AGTGACTGCCCTCACTGCTCAACCCTGTGCTGTGTG...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTCCTCGGGGGCCAGCTTaGTGTTGGTCTTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGPRGPA*CWSSPW
Trigger: CCATGGGGAAGACCAACAGCAAGCTGGCCCCCGAGG...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGAAGGTGCGGAAAGCGTaGTGCGCGAACTTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLKVRKA*CANLEA
Trigger: CGCCTCCAAGTTCGCGCAGCACGCTTTCCGCACCTT...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTAGGACCTGTCTCTTTTaGAGGGTGAGGTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLRTCLF*RVRWSL
Trigger: GAGGGACCACCTCACCCTGCAAAAGAGACAGGTCCT...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGGCAACCCAGTGGCCTTaGTACCTCCAAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLATQWP*YLQGPS
Trigger: ACTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGC...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGGCAACCCAGTGGCCTTaGTACCTCCAAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMATQWP*YLQGPS
Trigger: ACTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGC...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCGCTAGATTCAGCATTTaGAGGGAAGGAACCTCACTT +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFARFSI*REGTSL
Trigger: AAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGC...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTCAGATTCTGGGACCTTaGAATTCACAGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSQILGP*NSQSCC
Trigger: GCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTG...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGCTCTGCCTCCTTCTCTaGACCCATGGGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMLCLLL*THGPGL
Trigger: CAGTCCAGGCCCATGGGTGCAGAGAAGGAGGCAGAG...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS-3UTR CCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCTTGTCCACACGCTGCTaGGGCGTGAGCCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFLSTRC*GVSPSW
Trigger: CCAGGACGGGCTCACGCCCCAGCAGCGTGTGGACAA...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGCAACACAATGGATaGGTCACTCTTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVQQHNG*VTLGCL
Trigger: GAGGCAGCCAAGAGTGACCCATCCATTGTGTTGCTG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCTTTTGCAGGGTGAGGTaGTCCCTCAAAGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFFCRVR*SLKDLD
Trigger: ATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTCAGAACCAGCACACTTaGAAGATGTTGAACTACCTG +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSQNQHT*KMLNYL
Trigger: CAGGTAGTTCAACATCTTCCAAGTGTGCTGGTTCTG...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTAGGATAGCAACCCAGTaGTTGCAAACCAGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGRIATQ*LQTSGC
Trigger: GCAACCACTGGTTTGCAACCACTGGGTTGCTATCCT...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTCTAATAGCCAGTTCCTaGGAGCAATGCAACATCCTT +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSLIASS*EQCNIL
Trigger: AAGGATGTTGCATTGCTCCCAGGAACTGGCTATTAG...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTAAGCCTCACCCAGGGTaGATCTTCAGGAAATATTTG +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSKPHPG*IFRKYL
Trigger: CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTT...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTAAGGGCTATACACCCTaGCAGGCCCAGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGKGYTP*QAQSCP
Trigger: GGGGCAGGACTGGGCCTGCCAGGGTGTATAGCCCTT...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGTCTCTTTTGCAGGGTaGGGTGGTCCCTCAAAGATC +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLVSFAG*GGPSKI
Trigger: GATCTTTGAGGGACCACCTCACCCTGCAAAAGAGAC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCACCTTCTGCTTAGCTaGGACCCTGACGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLHLLLS*DPDGWK
Trigger: CTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCTCTAGAGAAAAGAAGTaGAAATCCTCACCTCCATGG +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFSREKK*KSSPPW
Trigger: CCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGA...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCCTCCCAGGACAGCACTaGGCTGTTAGCACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVILPGQH*AVSTAA
Trigger: GGCAGCTGTGCTAACAGCTCAGTGCTGTCCTGGGAG...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCCTACCACAGTGCTCCTaGGCACACAGTCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVILPQCS*AHSPWD
Trigger: GTCCCAGGGACTGTGTGCTCAGGAGCACTGTGGTAG...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTATTAGCCCAAAAGGATaGATGAGGGTAGAGTATGTG +
Preference number: 4 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSISPKG*MRVEYV
Trigger: CACATACTCTACCCTCATTCATCCTTTTGGGCTAAT...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCATTAGCCCAAAAGGATaGATGAGGGTAGAGTATGTG +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFISPKG*MRVEYV
Trigger: CACATACTCTACCCTCATTCATCCTTTTGGGCTAAT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTGCCCAGTTGAGCTTCTaGTCGAAGCTGCCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIAQLSF*SKLPRE
Trigger: CTCCCGCGGCAGCTTCGAGCAGAAGCTCAACTGGGC...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR GCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGAAGCCAACTCCCCTATaGCCAATGGACATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGKPTPL*PMDIGS
Trigger: AGAACCAATGTCCATTGGGCATAGGGGAGTTGGCTT...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGAGTTCCTGGGAGCAATaGAACATCCTTGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGSSWEQ*NILEAL
Trigger: CAATGCCTCAAGGATGTTGCATTGCTCCCAGGAACT...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTAAAGACAATGCAGGATaGTTCGAGGGTTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLKDNAG*FEGSES
Trigger: TGACTCAGAACCCTCGAAGCATCCTGCATTGTCTTT...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCTGGCAGGCCCAGTCCTaGCCCCACACTCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFWQAQS*PHTLAK
Trigger: CTTTGCCAGAGTGTGGGGGCAGGACTGGGCCTGCCA...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTACCTCCTTTCTACTGCTaGTTAGAAGGCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLPPFYC*LEGPGP
Trigger: AGGCCCAGGGCCTTCTAAGCAGCAGTAGAAAGGAGG...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTTGGTCGTCCTTATCCTaGTCCATCTTCTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLWSSLS*SIFLKI
Trigger: GATCTTCAAGAAGATGGACCAGGATAAGGACGACCA...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGCAGCAGCAACACAATaGATGGGTCACTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLAAATQ*MGHSWL
Trigger: CAGCCAAGAGTGACCCATCCATTGTGTTGCTGCTGC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAAATGGACATTGGTTCTaGCCAAGTGGGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLNGHWF*PSGRWG
Trigger: GCCCCACCTCCCACTTGGCCAGAACCAATGTCCATT...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTACTTAACCTCACCTCCTaGGGCAAAAGCCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLLNLTS*GKSQLP
Trigger: GGGGAGTTGGCTTTTGCCCCAGGAGGTGAGGTTAAG...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGAAGAGACCCCCTTTATaGGATCTGGAGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVKRPPL*DLEPQE
Trigger: TTCCTGAGGCTCCAGATCCCATAAAGGGGGTCTCTT...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGATGAGATGGGGCACATaGCAAGCCTTTGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEMRWGT*QAFESH
Trigger: ATGGCTTTCAAAGGCTTGCCATGTGCCCCATCTCAT...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTGAGTGCTTGAAAATGTaGGGACTTCAACCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGECLKM*GLQPSS
Trigger: GGAGCTTGGTTGAAGTCCCCACATTTTCAAGCACTC...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGGAGTGCTTGAAAATGTaGGGACTTCAACCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEECLKM*GLQPSS
Trigger: GGAGCTTGGTTGAAGTCCCCACATTTTCAAGCACTC...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCCCCAATTTGGCCCTGTaGCAGGCCTGTGGGACCACA +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFPNLAL*QACGTT
Trigger: TGTGGTCCCACAGGCCTGTCACAGGGCCAAATTGGG...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTCACCTTCTGCTTAGCTaGGACCCTGACGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGHLLLS*DPDGWK
Trigger: CTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTG...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCAAGCAGCAAAAACTGCTaGGAGTGGCAGCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: ADLRFGVRKSLSNRACLASSKNC*EWQLRT
Trigger: AGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTGCT...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGGGACCAAGCTCTATTaGTCAGCATCCCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLGTKLY*SASPRV
Trigger: AACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCCTGCTAGTTCCTGCCTaGGGATGTGAACTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVILLVPA*GCELPS
Trigger: GCTGGGGAGTTCACATCCTCAGGCAGGAACTAGCAG...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTTCTAGAGAAAAGAAGTaGAAATCCTCACCTCCATGG +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLSREKK*KSSPPW
Trigger: CCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGA...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTAGAACACTGAGTGCTTaGAAATGTGGGGACTTCAAC +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGRTLSA*KCGDFN
Trigger: GTTGAAGTCCCCACATTTTCAAGCACTCAGTGTTCT...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGAGAACACTGAGTGCTTaGAAATGTGGGGACTTCAAC +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREERTLSA*KCGDFN
Trigger: GTTGAAGTCCCCACATTTTCAAGCACTCAGTGTTCT...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGATCTCTTTCCTGCAGATaGAATTCCCCTGCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRSLSCR*NSPAPG
Trigger: GCCCGGGGCAGGGGAATTGCATCTGCAGGAAAGAGA...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTCAATGTAACTTGCCCTaGTGTCAACCTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLQCNLP*CQPLHS
Trigger: GCTGTGCAGAGGTTGACAGCAGGGCAAGTTACATTG...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGAAAGACAATGCAGGATaGTTCGAGGGTTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGKDNAG*FEGSES
Trigger: TGACTCAGAACCCTCGAAGCATCCTGCATTGTCTTT...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGTGGTCGTCCTTATCCTaGTCCATCTTCTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEWSSLS*SIFLKI
Trigger: GATCTTCAAGAAGATGGACCAGGATAAGGACGACCA...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGTTGGTTCTGGCCAAGTaGGAGGTGGGGCTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLLVLAK*EVGLED
Trigger: GTCTTCTAGCCCCACCTCCCACTTGGCCAGAACCAA...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGAATGGACATTGGTTCTaGCCAAGTGGGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLNGHWF*PSGRWG
Trigger: GCCCCACCTCCCACTTGGCCAGAACCAATGTCCATT...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTTCCATAAATTATGTCTaGGTGCCTAAACAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FCRVRWSLKDLDGGEEGLSINYV*VPKQWP
Trigger: TGGCCACTGTTTAGGCACCCAGACATAATTTATGGA...AAGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCAGGGCCCAGTAGAGCTTaGGACCAAGCTCTATTGATC +
Preference number: 4 (lower is better)
Translates to: ADLRFGVRKSLSNRACLAGPSRA*DQALLI
Trigger: GATCAATAGAGCTTGGTCCCAAGCTCTACTGGGCCC...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGAGCAAAAATCACCCATaGGTATGTGTGTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREESKNHP*VCVSRS
Trigger: GCTTCTGGACACACATACCCATGGGTGATTTTTGCT...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGAAGCCTCACCCAGGGTaGATCTTCAGGAAATATTTG +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEKPHPG*IFRKYL
Trigger: CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTT...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAGGCCCTGGGCCTGACTaGCCTCCACCAAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SETKPNPETNYQDTEYTLGPGPD*PPPSRK
Trigger: CTTCCTGCTTGGTGGAGGCCAGTCAGGCCCAGGGCC...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCTTTATTCACTGTCAGTaGGGAAAGAAACACACCACA +
Preference number: 4 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFFIHCQ*GKKHTT
Trigger: TGTGGTGTGTTTCTTTCCCCACTGACAGTGAATAAA...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 72 bp AGTCTTAGCCCTGTGTCACCTCCTGACTATGTGATCTaGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLSPVSPPDYVI*HKGCFLSESQL
Trigger: AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGGTGACACAGGGCTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 72 bp CATTGTGTGTTCACACTGCTGGGCTGTCTGAGAATATaGGGCCTGAGGAGCAAAAATCACCCATGGGTATGT +
Preference number: 4 (lower is better)
Translates to: HCVFTLLGCLRI*GLRSKNHPWVC
Trigger: ACATACCCATGGGTGATTTTTGCTCCTCAGGCCCAATATTCTCAGACAGCCCAGCAGTGTGAACACACAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTCTGATTCTGTGGCAGTaGAGGAACAAGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLLILWQ*RNKSSS
Trigger: AGAACTGGACTTGTTCCTTCACTGCCACAGAATCAG...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTCTGTGATGCTGACTaGCCGCACAAGACATACCTA +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLVCDAD*PHKTYL
Trigger: TAGGTATGTCTTGTGCGGTCAGTCAGCATCACAGAC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTATTAGCCCAAAAGGATaGATGAGGGTAGAGTATGTG +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGISPKG*MRVEYV
Trigger: CACATACTCTACCCTCATTCATCCTTTTGGGCTAAT...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTCACACAGCACAGGGTTaGGCAGTGAGGGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIHTAQG*AVRAVT
Trigger: AGTGACTGCCCTCACTGCTCAACCCTGTGCTGTGTG...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGTCTTGTAGATTGCCTTaGTGTAGAGCTGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREESCRLP*CRAAET
Trigger: AGTTTCAGCAGCTCTACATCAAGGCAATCTACAAGA...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612703.3
CDS-3UTR GCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTACCTCGGGGGCCAGCTTaGTGTTGGTCTTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: SETKPNPETNYQDTEYTLPRGPA*CWSSPW
Trigger: CCATGGGGAAGACCAACAGCAAGCTGGCCCCCGAGG...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGAAGGACCTGTCTCTTTTaGAGGGTGAGGTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRRTCLF*RVRWSL
Trigger: GAGGGACCACCTCACCCTGCAAAAGAGACAGGTCCT...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAGAAATCAACTGTCACTaGACGTCAAAGGTAATTTCT +
Preference number: 4 (lower is better)
Translates to: PDGWKFASQPYELPEGTREINCH*TSKVIS
Trigger: AGAAATTACCTTTGACGTGCAGTGACAGTTGATTTC...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGTCAGCAATCATTTCCTaGTCCCACCCTGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMSAIIS*SHPGLT
Trigger: TGTCAGCCCAGGGTGGGAGCAGGAAATGATTGCTGA...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTTCTCTTTCCTGCAGATaGAATTCCCCTGCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGISLSCR*NSPAPG
Trigger: GCCCGGGGCAGGGGAATTGCATCTGCAGGAAAGAGA...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGAGGCAGAACACTGAGTaGTTGAAAATGTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVRQNTE*LKMWGL
Trigger: AAGTCCCCACATTTTCAAGCACTCAGTGTTCTGCCT...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCGCCAGCCTTGTGCTTTaGGGCAAGTCTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIASLVL*GKSLSA
Trigger: AGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGC...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGCATTCCTTCTCTCTCTaGAGCAAGGCAAATTTCTAC +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEHSFSL*SKANFY
Trigger: GTAGAAATTTGCCTTGCTGCAGAGAGAGAAGGAATG...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTCCTCCTTTCTACTGCTaGTTAGAAGGCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGPPFYC*LEGPGP
Trigger: AGGCCCAGGGCCTTCTAAGCAGCAGTAGAAAGGAGG...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGTTTTGCAGGGTGAGGTaGTCCCTCAAAGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVFCRVR*SLKDLD
Trigger: ATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGATGCCCAATGGACATTaGTTCTGGCCAAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMMPNGH*FWPSGR
Trigger: CCTCCCACTTGGCCAGAACCAATGTCCATTGGGCAT...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCCCCTTTATGGGATCTaGAGCCTCAGGAATGGACAG +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLPLYGI*SLRNGQ
Trigger: CTGTCCATTCCTGAGGCTCCAGATCCCATAAAGGGG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCAGGATAGCAACCCAGTaGCCTTGCTACCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIRIATQ*PCYLQG
Trigger: CCCTTGGAGGTAGCAAGGCCACTGGGTTGCTATCCT...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGAAGGATAGCAACCCAGTaGCCTTGCTACCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRRIATQ*PCYLQG
Trigger: CCCTTGGAGGTAGCAAGGCCACTGGGTTGCTATCCT...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCAGTGGTTGCAAACCAGTaGTTGCTATCCCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ADLRFGVRKSLSNRACLAVVANQ*LLSPAR
Trigger: TCTTGCTGGGGATAGCAACCACTGGTTTGCAACCAC...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTTCAAACACGCCTTCATaGGTAGGCATGTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGSNTPS*VGMFLL
Trigger: TAAGAGAAACATGCCTACCCATGAAGGCGTGTTTGA...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCCTTCCATCAGCAAGATaGTGGTCCCAGTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVILPSAR*WSQFLA
Trigger: GGCCAGGAACTGGGACCACCATCTTGCTGATGGAAG...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCCAAGTCTCTCTCAGCTaGTGCAGGGACGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFQVSLS*CRDGRP
Trigger: AGGTCTCCCGTCCCTGCACCAGCTGAGAGAGACTTG...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGCCTGGTCCATCTTCTTaGAGATCTTGTCCACACGCT +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMPGPSS*RSCPHA
Trigger: AGCGTGTGGACAAGATCTTCAAGAAGATGGACCAGG...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCCTGGTCCATCTTCTTaGAGATCTTGTCCACACGCT +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLPGPSS*RSCPHA
Trigger: AGCGTGTGGACAAGATCTTCAAGAAGATGGACCAGG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCGTCCCTCAAAGATCTTaGTGGAGGGGAGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFVPQRS*WRGGRA
Trigger: AGCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGAC...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCGAAGAAAGGACTGAATaGACGCTCCAAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIEERTE*TLQRLG
Trigger: CCCCAGCCTTTGGAGCGTTCATTCAGTCCTTTCTTC...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTACTGATTCTGTGGCAGTaGAGGAACAAGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLLILWQ*RNKSSS
Trigger: AGAACTGGACTTGTTCCTTCACTGCCACAGAATCAG...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGGTCTGTGATGCTGACTaGCCGCACAAGACATACCTA +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMVCDAD*PHKTYL
Trigger: TAGGTATGTCTTGTGCGGTCAGTCAGCATCACAGAC...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGGGGATGCTTCCTCTCTaGATCTCAGCTTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMGMLPL*ISASKS
Trigger: AGACTTGGAAGCTGAGATTCAGAGAGGAAGCATCCC...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCGAAATCAACTGTCACTaGACGTCAAAGGTAATTTCT +
Preference number: 4 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIEINCH*TSKVIS
Trigger: AGAAATTACCTTTGACGTGCAGTGACAGTTGATTTC...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCGCTGCATCTCTTTCCTaGAGATGCAATTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIAASLS*RCNSPA
Trigger: GGCAGGGGAATTGCATCTGCAGGAAAGAGATGCAGC...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCCCCAGAGTTTTCACCTaGAGAGAAGCAGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIPRVFT*REAGQV
Trigger: CACCTGTCCTGCTTCTCTGCAGGTGAAAACTCTGGG...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCAATGTAACTTGCCCTaGTGTCAACCTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLQCNLP*CQPLHS
Trigger: GCTGTGCAGAGGTTGACAGCAGGGCAAGTTACATTG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCATTCCTTCTCTCTCTaGAGCAAGGCAAATTTCTAC +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVHSFSL*SKANFY
Trigger: GTAGAAATTTGCCTTGCTGCAGAGAGAGAAGGAATG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCATCCTCCAATGTAATCTaGTCGTCCTTATCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ADLRFGVRKSLSNRACLASSNVI*SSLSWS
Trigger: GGACCAGGATAAGGACGACCAGATTACATTGGAGGA...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGAGCAGCAGCAACACAATaGATGGGTCACTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRAAATQ*MGHSWL
Trigger: CAGCCAAGAGTGACCCATCCATTGTGTTGCTGCTGC...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTATGCCCAATGGACATTaGTTCTGGCCAAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGMPNGH*FWPSGR
Trigger: CCTCCCACTTGGCCAGAACCAATGTCCATTGGGCAT...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCGGGCCCAGTAGAGCTTaGGACCAAGCTCTATTGATC +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIGPSRA*DQALLI
Trigger: GATCAATAGAGCTTGGTCCCAAGCTCTACTGGGCCC...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCTGCAGGAGCATGTCCTaGGCCACCTGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFCRSMS*ATCCSF
Trigger: GAAGGAACAACAGGTGGCCCAGGACATGCTCCTGCA...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATACATAAATCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCTGAAAGGACTAAAGTaGCCATCTGAAGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: IHKSLPALCFAASLSQLVLKGLK*PSEVAF
Trigger: AAAGGCTACTTCAGATGGCCACTTTAGTCCTTTCAG...CACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGATTTATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGTTTATTCACTGTCAGTaGGGAAAGAAACACACCACA +
Preference number: 4 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEFIHCQ*GKKHTT
Trigger: TGTGGTGTGTTTCTTTCCCCACTGACAGTGAATAAA...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCGTAGGGGAAGAACTTaGTGTAGAGCTGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLRRGRT*CRAAET
Trigger: AGTTTCAGCAGCTCTACATCAAGTTCTTCCCCTACG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372844.8
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTACTGCTAGTTCCTGCCTaGGGATGTGAACTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SETKPNPETNYQDTEYTLLLVPA*GCELPS
Trigger: GCTGGGGAGTTCACATCCTCAGGCAGGAACTAGCAG...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCTCAGCAATCATTTCCTaGTCCCACCCTGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFSAIIS*SHPGLT
Trigger: TGTCAGCCCAGGGTGGGAGCAGGAAATGATTGCTGA...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTGCTGCATCTCTTTCCTaGAGATGCAATTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIAASLS*RCNSPA
Trigger: GGCAGGGGAATTGCATCTGCAGGAAAGAGATGCAGC...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTCCCAGAGTTTTCACCTaGAGAGAAGCAGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIPRVFT*REAGQV
Trigger: CACCTGTCCTGCTTCTCTGCAGGTGAAAACTCTGGG...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGTTGCAAACCAGTGGTTaGTATCCCCAGCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLLQTSG*YPQQED
Trigger: ATCCTCTTGCTGGGGATAGCAACCACTGGTTTGCAA...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGCTAGATTCAGCATTTaGAGGGAAGGAACCTCACTT +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLARFSI*REGTSL
Trigger: AAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTATCATACATAAATCTCTaGCAGCCTTGTGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLSYINL*QPCALR
Trigger: CCGCAAAGCACAAGGCTGGCAGAGATTTATGTATGA...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAGGCGTGAGCCCGTCCTaGTTCATGCGCATCATGATC +
Preference number: 4 (lower is better)
Translates to: SETKPNPETNYQDTEYTLGVSPS*FMRIMI
Trigger: GATCATGATGCGCATGAACCAGGACGGGCTCACGCC...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTTCCATAAATTATGTCTaGGTGCCTAAACAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLSINYV*VPKQWP
Trigger: TGGCCACTGTTTAGGCACCCAGACATAATTTATGGA...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGGTGTGTCCAGAAGCCTaGAGTAATCAAACACGCCTT +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLVCPEA*SNQTRL
Trigger: AAGGCGTGTTTGATTACTCCAGGCTTCTGGACACAC...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTACCATCAGCAAGATGGTaGTCCCAGTTCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SETKPNPETNYQDTEYTLPSARW*SQFLAW
Trigger: CCAGGCCAGGAACTGGGACCACCATCTTGCTGATGG...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAGGTTCATGCGCATCATaGTCACGGTGCCCACCATCT +
Preference number: 4 (lower is better)
Translates to: SETKPNPETNYQDTEYTLGSCAS*SRCPPS
Trigger: AGATGGTGGGCACCGTGATCATGATGCGCATGAACC...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCGGGATGCTTCCTCTCTaGATCTCAGCTTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFGMLPL*ISASKS
Trigger: AGACTTGGAAGCTGAGATTCAGAGAGGAAGCATCCC...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCCCCTGTGTCACCTCCTaGCTATGTGATCTTGCACAA +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFPCVTS*LCDLAQ
Trigger: TTGTGCAAGATCACATAGTCAGGAGGTGACACAGGG...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTAAGCCAACTCCCCTATaGCCAATGGACATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGKPTPL*PMDIGS
Trigger: AGAACCAATGTCCATTGGGCATAGGGGAGTTGGCTT...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCCCGGCAGTCAAAGCATaGAGCTGTATAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFPAVKA*SCIAHG
Trigger: TCCATGAGCTATACAGCTGCATGCTTTGACTGCCGG...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGAGGCAGAACACTGAGTaGTTGAAAATGTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMRQNTE*LKMWGL
Trigger: AAGTCCCCACATTTTCAAGCACTCAGTGTTCTGCCT...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGAGGCAGAACACTGAGTaGTTGAAAATGTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLRQNTE*LKMWGL
Trigger: AAGTCCCCACATTTTCAAGCACTCAGTGTTCTGCCT...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGCAGAACCAGCACACTTaGAAGATGTTGAACTACCTG +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMQNQHT*KMLNYL
Trigger: CAGGTAGTTCAACATCTTCCAAGTGTGCTGGTTCTG...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCGTGGTTGCAAACCAGTaGTTGCTATCCCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFVVANQ*LLSPAR
Trigger: TCTTGCTGGGGATAGCAACCACTGGTTTGCAACCAC...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTAGGATAGCAACCCAGTaGTTGCAAACCAGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIRIATQ*LQTSGC
Trigger: GCAACCACTGGTTTGCAACCACTGGGTTGCTATCCT...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCGTGTGTCCAGAAGCCTaGAGTAATCAAACACGCCTT +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVIVCPEA*SNQTRL
Trigger: AAGGCGTGTTTGATTACTCCAGGCTTCTGGACACAC...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGTCAAAGGTAATTTCTaGTCACAAGTACAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PPDYVILHKGCFLSESQLVKGNF*SQVQEK
Trigger: TTTCTCCTGTACTTGTGATCAGAAATTACCTTTGAC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTTTCTTGACCCCACAGTaGTCTCTAAAGTCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGFLTPQ*SLKSAQ
Trigger: TTGAGCTGACTTTAGAGATCACTGTGGGGTCAAGAA...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTAAGCCAACTCCCCTATaGCCAATGGACATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIKPTPL*PMDIGS
Trigger: AGAACCAATGTCCATTGGGCATAGGGGAGTTGGCTT...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTAGTTCCTGGGAGCAATaGAACATCCTTGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGISSWEQ*NILEAL
Trigger: CAATGCCTCAAGGATGTTGCATTGCTCCCAGGAACT...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGATCATACATAAATCTCTaGCAGCCTTGTGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRSYINL*QPCALR
Trigger: CCGCAAAGCACAAGGCTGGCAGAGATTTATGTATGA...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGACAGATTCTGGGACCTTaGAATTCACAGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRQILGP*NSQSCC
Trigger: GCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTG...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGCATTCCTTCTCTCTCTaGAGCAAGGCAAATTTCTAC +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMHSFSL*SKANFY
Trigger: GTAGAAATTTGCCTTGCTGCAGAGAGAGAAGGAATG...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCTCTTGTATCACTATGTaGCTCCCGAAGGCGACACTA +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFSCITM*LPKATL
Trigger: TAGTGTCGCCTTCGGGAGGCACATAGTGATACAAGA...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTTCTTGTATCACTATGTaGCTCCCGAAGGCGACACTA +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGISCITM*LPKATL
Trigger: TAGTGTCGCCTTCGGGAGGCACATAGTGATACAAGA...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGATGGTCGTCCTTATCCTaGTCCATCTTCTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRWSSLS*SIFLKI
Trigger: GATCTTCAAGAAGATGGACCAGGATAAGGACGACCA...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTTCCTCCAATGTAATCTaGTCGTCCTTATCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGISSNVI*SSLSWS
Trigger: GGACCAGGATAAGGACGACCAGATTACATTGGAGGA...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGACAGAACCAGCACACTTaGAAGATGTTGAACTACCTG +
Preference number: 4 (lower is better)
Translates to: RFSICREGTSLSEKLFTRQNQHT*KMLNYL
Trigger: CAGGTAGTTCAACATCTTCCAAGTGTGCTGGTTCTG...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTGAGTGCTTGAAAATGTaGGGACTTCAACCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIECLKM*GLQPSS
Trigger: GGAGCTTGGTTGAAGTCCCCACATTTTCAAGCACTC...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGTCAAACACGCCTTCATaGGTAGGCATGTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMSNTPS*VGMFLL
Trigger: TAAGAGAAACATGCCTACCCATGAAGGCGTGTTTGA...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTAGCAAAAATCACCCATaGGTATGTGTGTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGSKNHP*VCVSRS
Trigger: GCTTCTGGACACACATACCCATGGGTGATTTTTGCT...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTCAAAGGTAATTTCTaGTCACAAGTACAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLVKGNF*SQVQEK
Trigger: TTTCTCCTGTACTTGTGATCAGAAATTACCTTTGAC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR GCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCTCATACATAAATCTCTaGCAGCCTTGTGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFSYINL*QPCALR
Trigger: CCGCAAAGCACAAGGCTGGCAGAGATTTATGTATGA...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCTTTTGCAGGGTGAGGTaGTCCCTCAAAGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFFCRVR*SLKDLD
Trigger: ATCAAGATCTTTGAGGGACCACCTCACCCTGCAAAA...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAAAGAGACCCCCTTTATaGGATCTGGAGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SETKPNPETNYQDTEYTLKRPPL*DLEPQE
Trigger: TTCCTGAGGCTCCAGATCCCATAAAGGGGGTCTCTT...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTTCCATAAATTATGTCTaGGTGCCTAAACAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGSINYV*VPKQWP
Trigger: TGGCCACTGTTTAGGCACCCAGACATAATTTATGGA...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTTCATGGATCCAAAATTaGGAAGCAGGCATTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FLGISSINYVWVPKQWPGSWIQN*EAGIGK
Trigger: CTTTCCAATGCCTGCTTCCCAATTTTGGATCCATGA...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp CAGCAAAAACTGCTGAGAGTGGCAGCTCAGGACTTAGTCTTAAAAAGTGTTATCTCATGGATCCAAAATTaGGAAGCAGGCATTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QQKLLRVAAQDLVLKSVISWIQN*EAGIGK
Trigger: CTTTCCAATGCCTGCTTCCCAATTTTGGATCCATGA...GATAACACTTTTTAAGACTAAGTCCTGAGCTGCCACTCTCAGCAGTTTTTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAAGGATAGCAACCCAGTaGTTGCAAACCAGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SETKPNPETNYQDTEYTLRIATQ*LQTSGC
Trigger: GCAACCACTGGTTTGCAACCACTGGGTTGCTATCCT...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCCTAATAGCCAGTTCCTaGGAGCAATGCAACATCCTT +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFLIASS*EQCNIL
Trigger: AAGGATGTTGCATTGCTCCCAGGAACTGGCTATTAG...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
3UTR CAA 72 bp CAGCAAGGCAAATTTCTACCTCTAGAGACTCTGCCATaGTCAGGAAAGGATTTAGTGCCTTTACTTATGAAC +
Preference number: 4 (lower is better)
Translates to: QQGKFLPLETLP*SGKDLVPLLMN
Trigger: GTTCATAAGTAAAGGCACTAAATCCTTTCCTGACAATGGCAGAGTCTCTAGAGGTAGAAATTTGCCTTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR TCA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGGTCAAAGGTAATTTCTaGTCACAAGTACAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLVKGNF*SQVQEK
Trigger: TTTCTCCTGTACTTGTGATCAGAAATTACCTTTGAC...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCTCAAACACGCCTTCATaGGTAGGCATGTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFSNTPS*VGMFLL
Trigger: TAAGAGAAACATGCCTACCCATGAAGGCGTGTTTGA...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTACTAATAGCCAGTTCCTaGGAGCAATGCAACATCCTT +
Preference number: 4 (lower is better)
Translates to: SETKPNPETNYQDTEYTLLIASS*EQCNIL
Trigger: AAGGATGTTGCATTGCTCCCAGGAACTGGCTATTAG...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CCA 90 bp AAACTTTCACTCACGTGGCTCCTAAACTTCCAAATGCTTTTCATTTCGTCCTTCTTTATTCACTGTCAGTaGGGAAAGAAACACACCACA +
Preference number: 4 (lower is better)
Translates to: KLSLTWLLNFQMLFISSFFIHCQ*GKKHTT
Trigger: TGTGGTGTGTTTCTTTCCCCACTGACAGTGAATAAA...GAAGGACGAAATGAAAAGCATTTGGAAGTTTAGGAGCCACGTGAGTGAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS GCA 90 bp TCGGCGGGCCGCGGGAACCGAGGCTGGCTCGCGGGCCGGCAGCTGTaGTCTCCAAGGTCTGCGCCGGAGCCGCCTTCCAGCTCTTGTATC +
Preference number: 5 (lower is better)
Translates to: SAGRGNRGWLAGRQL*SPRSAPEPPSSSCI
Trigger: GATACAAGAGCTGGAAGGCGGCTCCGGCGCAGACCTTGGAGAGCACAGCTGCCGGCCCGCGAGCCAGCCTCGGTTCCCGCGGCCCGCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS CCA 90 bp AGGCGGCTCTGCCTCCTTCTCTGCACCCATGGGCCTGGACTGAGGTaGGGGGTCTCCTGCCCAGGGGTGGGCTCTTCAGTTGCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: RRLCLLLCTHGPGLR*GVSCPGVGSSVAAA
Trigger: GGCGGCAGCAACTGAAGAGCCCACCCCTGGGCAGGAGACCCCCCACCTCAGTCCAGGCCCATGGGTGCAGAGAAGGAGGCAGAGCCGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS GCA 90 bp GAACCGAGGCTGGCTCGCGGGCCGGCAGCTGTGCTCTCCAAGGTCTaGGCCGGAGCCGCCTTCCAGCTCTTGTATCACTATGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: EPRLARGPAAVLSKV*AGAAFQLLYHYVPP
Trigger: GGGAGGCACATAGTGATACAAGAGCTGGAAGGCGGCTCCGGCGCAGACCTTGGAGAGCACAGCTGCCGGCCCGCGAGCCAGCCTCGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCACCTCGGGGGCCAGCTaGCTGTTGGTCTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: PPPGRPAREVIRLGGGHATSGAS*LLVFPM
Trigger: CATGGGGAAGACCAACAGCAAGCTGGCCCCCGAGGT...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS GCA 90 bp TCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATaGCCCTTCTGGCCAGGGACCCTGCCCCTCACCAGCTTCTACTTC +
Preference number: 5 (lower is better)
Translates to: SWEASQRGHQVGRWP*PFWPGTLPLTSFYF
Trigger: GAAGTAGAAGCTGGTGAGGGGCAGGGTCCCTGGCCAGAAGGGGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGGGGGCCAGCTTGCTGTaGGTCTTCCCCATGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPEGASLL*VFPMAG
Trigger: CCCCGCCATGGGGAAGACCAACAGCAAGCTGGCCCC...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGGGTCCCTCAAAGATCTaGATGGAGGGGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SLPALCFAASLSQLVQGRGPSKI*MEGRKG
Trigger: GCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACC...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCAGCAACCCAGTGGCCTaGCTACCTCCAAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFSNPVA*LPPRAQ
Trigger: CTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGCT...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCGCAGATTCTGGGACCTaGCAATTCACAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PPPGRPAREVIRLGGGHAADSGT*QFTELL
Trigger: CAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGC...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS GCA 90 bp CCAGGGACCCTGCCCCTCACCAGCTTCTACTTCTGCATGTCACACTaGAGCAGCAACACAATGGATGGGTCACTCTTGGCTGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PGTLPLTSFYFCMSH*SSNTMDGSLLAASL
Trigger: CAAGGAGGCAGCCAAGAGTGACCCATCCATTGTGTTGCTGCTGCAGTGTGACATGCAGAAGTAGAAGCTGGTGAGGGGCAGGGTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGTTGGGAGGTGGCCATGCCCTCATGGATCCAAAATaGGGAAGCAGGCATTGGAAA +
Preference number: 5 (lower is better)
Translates to: PPPGRPAREVIRLGGGHALMDPK*GSRHWK
Trigger: TTTCCAATGCCTGCTTCCCAATTTTGGATCCATGAG...GGCATGGCCACCTCCCAACCTGATGACCTCTCTGGCTGGCCTCCCAGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTCTGCCAGCCTTGTGCTTTGCGGCAAGTCTCTCTCAGCTGGTGCAGGGACGGTGGGACCAAGCTCTATaGATCAGCATCCCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: SLPALCFAASLSQLVQGRWDQAL*ISIPQS
Trigger: ACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCCA...CCGTCCCTGCACCAGCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGACCTGTGTCTCTTCTCAAGGCAGGGCCAGTGCTCTACCACAGTGCTCCTGAGTGCCAGCCTTGTGCTTaGCGGCAAGTCTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: RPVSLLKAGPVLYHSAPECQPCA*RQVSLS
Trigger: GCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCA...CTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTGGGGCCAGCTTGCTGTaGGTCTTCCCCATGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PPDYVILHKGCFLSESQLGASLL*VFPMAG
Trigger: CCCCGCCATGGGGAAGACCAACAGCAAGCTGGCCCC...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTACCTCGGGGGCCAGCTaGCTGTTGGTCTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGTSGAS*LLVFPM
Trigger: CATGGGGAAGACCAACAGCAAGCTGGCCCCCGAGGT...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAGGTCCCTCAAAGATCTaGATGGAGGGGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: PDGWKFASQPYELPEGTRGPSKI*MEGRKG
Trigger: GCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACC...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTGCCAGCCTTGTGCTTaGCGGCAAGTCTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSCQPCA*RQVSLS
Trigger: GCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCA...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAGCCGCCTTCCAGCTCTaGTATCACTATGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: PDGWKFASQPYELPEGTRAAFQL*YHYVPP
Trigger: GGGAGGCACATAGTGATACAAGAGCTGGAAGGCGGC...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTCTGACGGCTGGAAGTTaGCCTCACAACCCTATGAGC +
Preference number: 5 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSLTAGS*PHNPMS
Trigger: GCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAG...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CATGTCCTGGGCCACCTGTTGTTCCTTCCATCAGCAAGATGGTGGTCCCAGTTCGTCCTGGGCCACCTGTaGTTCCTTCCATCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: HVLGHLLFLPSARWWSQFVLGHL*FLPSAR
Trigger: TCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGAC...GAACTGGGACCACCATCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCCACACAGCACAGGGTaGAGCAGTGAGGGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGPHSTG*SSEGSH
Trigger: GTGACTGCCCTCACTGCTCAACCCTGTGCTGTGTGG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGCCACACAGCACAGGGTaGAGCAGTGAGGGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: LPCCQPLHSLVTEMDREEPHSTG*SSEGSH
Trigger: GTGACTGCCCTCACTGCTCAACCCTGTGCTGTGTGG...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TGGCCCTGTGACAGGCCTGTGGGACCACATCCTATAAAGCATAATCCCAGGATCGCCGCCTTCCAGCTCTaGTATCACTATGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: WPCDRPVGPHPIKHNPRIAAFQL*YHYVPP
Trigger: GGGAGGCACATAGTGATACAAGAGCTGGAAGGCGGC...GATCCTGGGATTATGCTTTATAGGATGTGGTCCCACAGGCCTGTCACAGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTATGCCCAATGGACATaGGTTCTGGCCAAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSYAQWT*VLAKWE
Trigger: CTCCCACTTGGCCAGAACCAATGTCCATTGGGCATA...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TTGCCCTGCTGTCAACCTCTGCACAGCTTAGTCACAGAAATGGACAGGGAAGAGTCCTTCAGGAAGCCCTaGTACCACTGCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LPCCQPLHSLVTEMDREESFRKP*YHCFSS
Trigger: GGAGCTGAAGCAGTGGTACAAGGGCTTCCTGAAGGA...CTCTTCCCTGTCCATTTCTGTGACTAAGCTGTGCAGAGGTTGACAGCAGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTTCCTGGTCCATCTTCTaGAAGATCTTGTCCACACGC +
Preference number: 5 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSSWSIF*KILSTR
Trigger: GCGTGTGGACAAGATCTTCAAGAAGATGGACCAGGA...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGACTCTTGGCTGCCTCCTaGAACTCCTCCAATGTAATC +
Preference number: 5 (lower is better)
Translates to: PDGWKFASQPYELPEGTRLLAAS*NSSNVI
Trigger: GATTACATTGGAGGAGTTCAAGGAGGCAGCCAAGAG...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAAGCAACCCAGTGGCCTaGCTACCTCCAAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLSNPVA*LPPRAQ
Trigger: CTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGCT...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAAGAGAGGTCATCAGGTaGGGAGGTGGCCATGCCCCT +
Preference number: 5 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLREVIR*GGGHAP
Trigger: AGGGGCATGGCCACCTCCCAACCTGATGACCTCTCT...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTATGCCCAATGGACATaGGTTCTGGCCAAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGYAQWT*VLAKWE
Trigger: CTCCCACTTGGCCAGAACCAATGTCCATTGGGCATA...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTTGGGACCAAGCTCTATaGATCAGCATCCCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGWDQAL*ISIPQS
Trigger: ACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCCA...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAATAGCAACCCAGTGGTaGCAAACCAGTGGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: PDGWKFASQPYELPEGTRIATQW*QTSGCY
Trigger: ATAGCAACCACTGGTTTGCAACCACTGGGTTGCTAT...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ACTAACCAGCCTTCCAGCACCTTCTGCTTAGCTGAGACCCTGACGGCTGGAAGTGGCTGTCTGAGAATATaGGGCCTGAGGAGCAAAAAT +
Preference number: 5 (lower is better)
Translates to: TNQPSSTFCLAETLTAGSGCLRI*GLRSKN
Trigger: ATTTTTGCTCCTCAGGCCCAATATTCTCAGACAGCC...ACTTCCAGCCGTCAGGGTCTCAGCTAAGCAGAAGGTGCTGGAAGGCTGGTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTGACGGCTGGAAGTTTGCCTCACAACCCTATGAGCTTCCAGAGGGCACAAGAGCAGATTCTGGGACCTaGCAATTCACAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PDGWKFASQPYELPEGTRADSGT*QFTELL
Trigger: CAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGC...TCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTGGGTGGGCTCTTCAGTaGCTGCCGCCTGAGGCCGGT +
Preference number: 5 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIGWALQ*LPPEAG
Trigger: ACCGGCCTCAGGCGGCAGCAACTGAAGAGCCCACCC...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS-3UTR CAA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCTCTTGGCTGCCTCCTaGAACTCCTCCAATGTAATC +
Preference number: 5 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGLLAAS*NSSNVI
Trigger: GATTACATTGGAGGAGTTCAAGGAGGCAGCCAAGAG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGAGAGAGGTCATCAGGTaGGGAGGTGGCCATGCCCCT +
Preference number: 5 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLREVIR*GGGHAP
Trigger: AGGGGCATGGCCACCTCCCAACCTGATGACCTCTCT...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGAGAGAGGTCATCAGGTaGGGAGGTGGCCATGCCCCT +
Preference number: 5 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMREVIR*GGGHAP
Trigger: AGGGGCATGGCCACCTCCCAACCTGATGACCTCTCT...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCAGGTCCCTCAAAGATCTaGATGGAGGGGAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: ADLRFGVRKSLSNRACLAGPSKI*MEGRKG
Trigger: GCCCTTCCTCCCCTCCATCAAGATCTTTGAGGGACC...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCATGCCAGCCTTGTGCTTaGCGGCAAGTCTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: ADLRFGVRKSLSNRACLACQPCA*RQVSLS
Trigger: GCTGAGAGAGACTTGCCGCAAAGCACAAGGCTGGCA...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCCACACAGCACAGGGTaGAGCAGTGAGGGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLPHSTG*SSEGSH
Trigger: GTGACTGCCCTCACTGCTCAACCCTGTGCTGTGTGG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTAGCAACCCAGTGGCCTaGCTACCTCCAAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RQILGPCNSQSCCNKIGISNPVA*LPPRAQ
Trigger: CTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGCT...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ACCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGGCAGATTCTGGGACCTaGCAATTCACAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: THGYVCPEAWSNQTRLHGADSGT*QFTELL
Trigger: CAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGC...CCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCGAAGGCGACACTATTaGCATAAGCCCCGCCCCATC +
Preference number: 5 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLRRRHY*HKPRPI
Trigger: GATGGGGCGGGGCTTATGCAAATAGTGTCGCCTTCG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS CCA 90 bp GATGGGTCACTCTTGGCTGCCTCCTTGAACTCCTCCAATGTAATCTaGTCGTCCTTATCCTGGTCCATCTTCTTGAAGATCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: DGSLLAASLNSSNVI*SSLSWSIFLKILST
Trigger: TGTGGACAAGATCTTCAAGAAGATGGACCAGGATAAGGACGACCAGATTACATTGGAGGAGTTCAAGGAGGCAGCCAAGAGTGACCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTCTCATGGATCCAAAATaGGGAAGCAGGCATTGGAAA +
Preference number: 5 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGLMDPK*GSRHWK
Trigger: TTTCCAATGCCTGCTTCCCAATTTTGGATCCATGAG...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGGTCCTGGGCCACCTGTaGTTCCTTCCATCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLVLGHL*FLPSAR
Trigger: TCTTGCTGATGGAAGGAACAACAGGTGGCCCAGGAC...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTATCCTGGTCCATCTTCTaGAAGATCTTGTCCACACGC +
Preference number: 5 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLSWSIF*KILSTR
Trigger: GCGTGTGGACAAGATCTTCAAGAAGATGGACCAGGA...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTCTGACGGCTGGAAGTTaGCCTCACAACCCTATGAGC +
Preference number: 5 (lower is better)
Translates to: FLGISSINYVWVPKQWPGLTAGS*PHNPMS
Trigger: GCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAG...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGACTGACGGCTGGAAGTTaGCCTCACAACCCTATGAGC +
Preference number: 5 (lower is better)
Translates to: RFSICREGTSLSEKLFTRLTAGS*PHNPMS
Trigger: GCTCATAGGGTTGTGAGGCAAACTTCCAGCCGTCAG...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCCATGGGTATGTGTGTCCAGAAGCCTGGAGTAATCAAACACGCCTTCATGGGTAACATCCTTGAGGCATaGCTGGATAAACAACTGCTA +
Preference number: 5 (lower is better)
Translates to: PMGMCVQKPGVIKHAFMGNILEA*LDKQLL
Trigger: TAGCAGTTGTTTATCCAGCAATGCCTCAAGGATGTT...ACCCATGAAGGCGTGTTTGATTACTCCAGGCTTCTGGACACACATACCCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGTCCTGGTCCATCTTCTaGAAGATCTTGTCCACACGC +
Preference number: 5 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMSWSIF*KILSTR
Trigger: GCGTGTGGACAAGATCTTCAAGAAGATGGACCAGGA...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp ATCTCTAAAGTCAGCTCAAAGCCTCACCCAGGGTGGATCTTCAGGAAATATTTGCTCTTGGCTGCCTCCTaGAACTCCTCCAATGTAATC +
Preference number: 5 (lower is better)
Translates to: ISKVSSKPHPGWIFRKYLLLAAS*NSSNVI
Trigger: GATTACATTGGAGGAGTTCAAGGAGGCAGCCAAGAG...CAAATATTTCCTGAAGATCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTAGCAATGCAACATCCTaGAGGCATTGCTGGATAAAC +
Preference number: 5 (lower is better)
Translates to: PPDYVILHKGCFLSESQLSNATS*RHCWIN
Trigger: GTTTATCCAGCAATGCCTCAAGGATGTTGCATTGCT...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCAAATCCTCTTAGAGCCTaGGTTCAAGTCTTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: ADLRFGVRKSLSNRACLANPLRA*VQVLAL
Trigger: CAGGGCTAAGACTTGAACCAAGGCTCTAAGAGGATT...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp CCTCCTGACTATGTGATCTTGCACAAGGGATGCTTCCTCTCTGAATCTCAGCTTCAGAACACTGAGTGCTaGAAAATGTGGGGACTTCAA +
Preference number: 5 (lower is better)
Translates to: PPDYVILHKGCFLSESQLQNTEC*KMWGLQ
Trigger: TTGAAGTCCCCACATTTTCAAGCACTCAGTGTTCTG...AAGCTGAGATTCAGAGAGGAAGCATCCCTTGTGCAAGATCACATAGTCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTACTCATGGATCCAAAATaGGGAAGCAGGCATTGGAAA +
Preference number: 5 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLLMDPK*GSRHWK
Trigger: TTTCCAATGCCTGCTTCCCAATTTTGGATCCATGAG...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTTGGGACCAAGCTCTATaGATCAGCATCCCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIWDQAL*ISIPQS
Trigger: ACTCTGGGGGATGCTGATCAATAGAGCTTGGTCCCA...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGATAGCAACCCAGTGGTaGCAAACCAGTGGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMIATQW*QTSGCY
Trigger: ATAGCAACCACTGGTTTGCAACCACTGGGTTGCTAT...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp GTGTGGTTGCGAATTAGGCTAGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGAATATCAATGTAACTaGCCCTGCTGTCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: VWLRIRLDSAFAGKEPHLEYQCN*PCCQPL
Trigger: CAGAGGTTGACAGCAGGGCAAGTTACATTGATATTC...TAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCTAGCCTAATTCGCAACCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp GCAGATCTAAGATTTGGGGTTAGAAAAAGCCTCTCAAACAGAGCATGCCTGGCACAGAACACTGAGTGCTaGAAAATGTGGGGACTTCAA +
Preference number: 5 (lower is better)
Translates to: ADLRFGVRKSLSNRACLAQNTEC*KMWGLQ
Trigger: TTGAAGTCCCCACATTTTCAAGCACTCAGTGTTCTG...TGCCAGGCATGCTCTGTTTGAGAGGCTTTTTCTAACCCCAAATCTTAGATCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGGGCTGTCTGAGAATATaGGGCCTGAGGAGCAAAAAT +
Preference number: 5 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMGCLRI*GLRSKN
Trigger: ATTTTTGCTCCTCAGGCCCAATATTCTCAGACAGCC...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTACGAAGGCGACACTATTaGCATAAGCCCCGCCCCATC +
Preference number: 5 (lower is better)
Translates to: SETKPNPETNYQDTEYTLRRRHY*HKPRPI
Trigger: GATGGGGCGGGGCTTATGCAAATAGTGTCGCCTTCG...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGGAATATCAATGTAACTaGCCCTGCTGTCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMEYQCN*PCCQPL
Trigger: CAGAGGTTGACAGCAGGGCAAGTTACATTGATATTC...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TTTTTAGGCATTTCGTCCATAAATTATGTCTGGGTGCCTAAACAGTGGCCAGGTGGCTGTCTGAGAATATaGGGCCTGAGGAGCAAAAAT +
Preference number: 5 (lower is better)
Translates to: FLGISSINYVWVPKQWPGGCLRI*GLRSKN
Trigger: ATTTTTGCTCCTCAGGCCCAATATTCTCAGACAGCC...ACCTGGCCACTGTTTAGGCACCCAGACATAATTTATGGACGAAATGCCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTCAGCTTCCAAGTCTAGAGAAAAGAAGTGAAAATCCTCACCTCCATGGGATGCTAGAGACTCTGCCATaGTCAGGAAAGGATTTAGTG +
Preference number: 5 (lower is better)
Translates to: SQLPSLEKRSENPHLHGMLETLP*SGKDLV
Trigger: CACTAAATCCTTTCCTGACAATGGCAGAGTCTCTAG...CATCCCATGGAGGTGAGGATTTTCACTTCTTTTCTCTAGACTTGGAAGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTAATCCTCTTAGAGCCTaGGTTCAAGTCTTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RQILGPCNSQSCCNKIGINPLRA*VQVLAL
Trigger: CAGGGCTAAGACTTGAACCAAGGCTCTAAGAGGATT...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGATTCAGCATTTGCAGGGAAGGAACCTCACTTAGTGAAAAGCTTTTCACCAGACTAGAGACTCTGCCATaGTCAGGAAAGGATTTAGTG +
Preference number: 5 (lower is better)
Translates to: RFSICREGTSLSEKLFTRLETLP*SGKDLV
Trigger: CACTAAATCCTTTCCTGACAATGGCAGAGTCTCTAG...TCTGGTGAAAAGCTTTTCACTAAGTGAGGTTCCTTCCCTGCAAATGCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTGAATATCAATGTAACTaGCCCTGCTGTCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIEYQCN*PCCQPL
Trigger: CAGAGGTTGACAGCAGGGCAAGTTACATTGATATTC...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTCAGAACACTGAGTGCTaGAAAATGTGGGGACTTCAA +
Preference number: 5 (lower is better)
Translates to: RQILGPCNSQSCCNKIGIQNTEC*KMWGLQ
Trigger: TTGAAGTCCCCACATTTTCAAGCACTCAGTGTTCTG...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp AGGCAGATTCTGGGACCTTGCAATTCACAGAGTTGTTGCAATAAGATTGGAATTAACATCCTTGAGGCATaGCTGGATAAACAACTGCTA +
Preference number: 5 (lower is better)
Translates to: RQILGPCNSQSCCNKIGINILEA*LDKQLL
Trigger: TAGCAGTTGTTTATCCAGCAATGCCTCAAGGATGTT...AATTCCAATCTTATTGCAACAACTCTGTGAATTGCAAGGTCCCAGAATCTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTACTAGAGACTCTGCCATaGTCAGGAAAGGATTTAGTG +
Preference number: 5 (lower is better)
Translates to: SETKPNPETNYQDTEYTLLETLP*SGKDLV
Trigger: CACTAAATCCTTTCCTGACAATGGCAGAGTCTCTAG...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS-3UTR CAA 90 bp TCTGAAACTAAACCCAATCCAGAAACGAACTACCAAGATACGGAATATACACTAAACATCCTTGAGGCATaGCTGGATAAACAACTGCTA +
Preference number: 5 (lower is better)
Translates to: SETKPNPETNYQDTEYTLNILEA*LDKQLL
Trigger: TAGCAGTTGTTTATCCAGCAATGCCTCAAGGATGTT...TAGTGTATATTCCGTATCTTGGTAGTTCGTTTCTGGATTGGGTTTAGTTTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS CCA 72 bp TTGCTGCCGCCTGAGGCCGGTCGCCGGGTCGCTGGATaGCTCCGAGCCTCGGCGGGCCGCGGGAACCGAGGC +
Preference number: 6 (lower is better)
Translates to: LLPPEAGRRVAG*LRASAGRGNRG
Trigger: GCCTCGGTTCCCGCGGCCCGCCGAGGCTCGGAGCCATCCAGCGACCCGGCGACCGGCCTCAGGCGGCAGCAA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS GCA 72 bp CGCGGGAACCGAGGCTGGCTCGCGGGCCGGCAGCTGTaGTCTCCAAGGTCTGCGCCGGAGCCGCCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: RGNRGWLAGRQL*SPRSAPEPPSS
Trigger: GCTGGAAGGCGGCTCCGGCGCAGACCTTGGAGAGCACAGCTGCCGGCCCGCGAGCCAGCCTCGGTTCCCGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2
CDS GCA 72 bp CTGGCTCGCGGGCCGGCAGCTGTGCTCTCCAAGGTCTaGGCCGGAGCCGCCTTCCAGCTCTTGTATCACTAT +
Preference number: 6 (lower is better)
Translates to: LARGPAAVLSKV*AGAAFQLLYHY
Trigger: ATAGTGATACAAGAGCTGGAAGGCGGCTCCGGCGCAGACCTTGGAGAGCACAGCTGCCGGCCCGCGAGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS GCA 72 bp ATGGCGGGGCCTGAGCTGGGGATAAGTAGGCGGCTCTaGCTCCTTCTCTGCACCCATGGGCCTGGACTGAGG +
Preference number: 6 (lower is better)
Translates to: MAGPELGISRRL*LLLCTHGPGLR
Trigger: CCTCAGTCCAGGCCCATGGGTGCAGAGAAGGAGGCAGAGCCGCCTACTTATCCCCAGCTCAGGCCCCGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS CCA 72 bp TGCCTCCTTCTCTGCACCCATGGGCCTGGACTGAGGTaGGGGGTCTCCTGCCCAGGGGTGGGCTCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: CLLLCTHGPGLR*GVSCPGVGSSV
Trigger: AACTGAAGAGCCCACCCCTGGGCAGGAGACCCCCCACCTCAGTCCAGGCCCATGGGTGCAGAGAAGGAGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617690.2
CDS CAA 90 bp GCAGCTGTGCTCTCCAAGGTCTGCGCCGGAGCCGCCTTCCAGCTCTaGTATCACTATGTGCCTCCCGAAGGCGACACTATTTGCATAAGC +
Preference number: 6 (lower is better)
Translates to: AAVLSKVCAGAAFQL*YHYVPPEGDTICIS
Trigger: GCTTATGCAAATAGTGTCGCCTTCGGGAGGCACATAGTGATACAAGAGCTGGAAGGCGGCTCCGGCGCAGACCTTGGAGAGCACAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612703.3
ENST00000617690.2
CDS CCA 72 bp TGGTCCATCTTCTTGAAGATCTTGTCCACACGCTGCTaGGGCGTGAGCCCGTCCTGGTTCATGCGCATCATG +
Preference number: 6 (lower is better)
Translates to: WSIFLKILSTRC*GVSPSWFMRIM
Trigger: CATGATGCGCATGAACCAGGACGGGCTCACGCCCCAGCAGCGTGTGGACAAGATCTTCAAGAAGATGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372844.8
ENST00000612703.3
ENST00000617690.2