Pregenerated sensors for HPCA (Homo sapiens)
Ensembl gene IDs: ENSG00000121905Ensembl transcript IDs: ENST00000373467.4, ENST00000470166.5, ENST00000470896.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCTCAGCCAGGGGGACCGTGTCTCTTTCCCACGCAGGACACTGTaGATGGGGCTCTGGGTGCATCTGCCCATCTGTCTATGGGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: GLSQGDRVSFPRRTL*MGLWVHLPICLWAC Trigger: ACAGGCCCATAGACAGATGGGCAGATGCACCCAGAGCCCCATGCACAGTGTCCTGCGTGGGAAAGAGACACGGTCCCCCTGGCTGAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR CCA 90 bp | TCAGCCAGGGGGACCGTGTCTCTTTCCCACGCAGGACACTGTGCATaGGGCTCTGGGTGCATCTGCCCATCTGTCTATGGGCCTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: SARGTVSLSHAGHCA*GSGCICPSVYGPVC Trigger: ACACACAGGCCCATAGACAGATGGGCAGATGCACCCAGAGCCCCATGCACAGTGTCCTGCGTGGGAAAGAGACACGGTCCCCCTGGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR CCA 90 bp | AGGACACTGTGCATGGGGCTCTGGGTGCATCTGCCCATCTGTCTATaGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCGTGG | + |
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Preference number: 1 (lower is better) Translates to: RTLCMGLWVHLPICL*ACVCVRGQTQRAPW Trigger: CCACGGAGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGCAGATGCACCCAGAGCCCCATGCACAGTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR TCA 90 bp | GGCTCTGGGTGCATCTGCCCATCTGTCTATGGGCCTGTGTGTGTGTaGGAGGCCAAACACAGAGAGCTCCGTGGGTCTGTGTGTATCCAA | + |
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Preference number: 1 (lower is better) Translates to: GSGCICPSVYGPVCV*EAKHRELRGSVCIQ Trigger: TTGGATACACACAGACCCACGGAGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGCAGATGCACCCAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR CCA 90 bp | CTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCGTaGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LWACVCVRGQTQRAP*VCVYPSAKRQAGFL Trigger: CAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGGAGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTGTCGGGCCTTGGGGCTaGTGGGTGGGTAAGGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LPICLWACVCVRGQTQRAVGPWG*WVGKGA Trigger: GGCCCCCTTACCCACCCACCAGCCCCAAGGCCCGAC...AGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTGTGGGTAAGGGGGCCTaGCTGAGGGGCAGACCAACC | + |
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Preference number: 2 (lower is better) Translates to: LPICLWACVCVRGQTQRAVGKGA*LRGRPT Trigger: GGTTGGTCTGCCCCTCAGTCAGGCCCCCTTACCCAC...AGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR CCA 90 bp | GGACCGTGTCTCTTTCCCACGCAGGACACTGTGCATGGGGCTCTGGGTGCATCTAGGGCTTCCCCAATCTaGCCCCCAGCCAGAATACAC | + |
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Preference number: 2 (lower is better) Translates to: GPCLFPTQDTVHGALGASRASPI*PPARIH Trigger: GTGTATTCTGGCTGGGGGCCAGATTGGGGAAGCCCT...AGATGCACCCAGAGCCCCATGCACAGTGTCCTGCGTGGGAAAGAGACACGGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGGAAGCCTCTTTCTCCAACTCCACACCCCTAGAATCCTTCTCTCCCCTCGTAAGGGGGCCTGACTaGGGGGCAGACCAACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LKEASFSNSTPLESFSPLVRGPD*GADQPS Trigger: GCTGGGTTGGTCTGCCCCTCAGTCAGGCCCCCTTAC...GAGGGGAGAGAAGGATTCTAGGGGTGTGGAGTTGGAGAAAGAGGCTTCCTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR GCA 90 bp | CTCCGTGGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTGGGGCCCGCAAGCTGAGACCTaGAAGAAGGGGACTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LRGSVCIQVLKGRLAFWGPQAET*KKGTAP Trigger: AGGGGCAGTCCCCTTCTTGCAGGTCTCAGCTTGCGG...GCCCCAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR CCA 90 bp | GGACCGTGTCTCTTTCCCACGCAGGACACTGTGCATGGGGCTCTGGGTGCATCTCTGGAAGGTTTCACTTaGTGGCTTGGCCTAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: GPCLFPTQDTVHGALGASLEGFT*WLGLGT Trigger: GGTCCCTAGGCCAAGCCACCAAGTGAAACCTTCCAG...AGATGCACCCAGAGCCCCATGCACAGTGTCCTGCGTGGGAAAGAGACACGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTACCGCTTACTTGCTTTaGCCTGGGGGTACCGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LPICLWACVCVRGQTQRATAYLL*PGGTAG Trigger: CCCTGCGGTACCCCCAGGCCAAAGCAAGTAAGCGGT...AGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGGAAGCCTCTTTCTCCAACTCCACACCCCTAGAATCCTTCTCTCCCCTCTGTTGCCTCTGGGATTaGGGGGTGCTAACCGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: LKEASFSNSTPLESFSPLCCLWD*GVLTAY Trigger: GTAAGCGGTTAGCACCCCCCAATCCCAGAGGCAACA...GAGGGGAGAGAAGGATTCTAGGGGTGTGGAGTTGGAGAAAGAGGCTTCCTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCTGGCTTTCTGGGGCCCACAGCTGGCGGGCTAGTATCCTGGAAGGTTTCAACCGCTTACTTGCTTaGGCCTGGGGGTACCGCAGG | + |
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Preference number: 3 (lower is better) Translates to: AGWLSGAHSWRASILEGFNRLLA*AWGYRR Trigger: CCTGCGGTACCCCCAGGCCAAAGCAAGTAAGCGGTT...GAAACCTTCCAGGATACTAGCCCGCCAGCTGTGGGCCCCAGAAAGCCAGCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR CCA 72 bp | CCAATCTGGCCCCCAGCCAGAATACACACAAGGGAGTaGAAGCTAAGAGCCGGGAGGGGGCCGGTGAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PIWPPARIHTRE*KLRAGRGPVKG Trigger: TCCCTTCACCGGCCCCCTCCCGGCTCTTAGCTTCCACTCCCTTGTGTGTATTCTGGCTGGGGGCCAGATTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR CCA 72 bp | CACAGCTGGCGGGCTAGTATCCTGGAAGGTTTCACTTaGTGGCTTGGCCTAGGGACCAGCAAGGGCTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: HSWRASILEGFT*WLGLGTSKGWG Trigger: ACCCCAGCCCTTGCTGGTCCCTAGGCCAAGCCACCAAGTGAAACCTTCCAGGATACTAGCCCGCCAGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR CCA 72 bp | GGGACCGTGTCTCTTTCCCACGCAGGACACTGTGCATaGGGCTCTGGGTGCATCTGCCCATCTGTCTATGGG | + |
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Preference number: 3 (lower is better) Translates to: GTVSLSHAGHCA*GSGCICPSVYG Trigger: CCCATAGACAGATGGGCAGATGCACCCAGAGCCCCATGCACAGTGTCCTGCGTGGGAAAGAGACACGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR GCA 72 bp | CTTTCCCACGCAGGACACTGTGCATGGGGCTCTGGGTaGATCTGCCCATCTGTCTATGGGCCTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LSHAGHCAWGSG*ICPSVYGPVCV Trigger: CACACACACAGGCCCATAGACAGATGGGCAGATGCACCCAGAGCCCCATGCACAGTGTCCTGCGTGGGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR-3UTR CAA 90 bp | GCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCGTGCTAACCGCTTACTaGCTTTGGCCTGGGGGTACC | + |
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Preference number: 3 (lower is better) Translates to: AHLSMGLCVCERPNTESSVLTAY*LWPGGT Trigger: GGTACCCCCAGGCCAAAGCAAGTAAGCGGTTAGCAC...GGAGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| 3UTR CCA 72 bp | TGCATGGGGCTCTGGGTGCATCTGCCCATCTGTCTATaGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: CMGLWVHLPICL*ACVCVRGQTQR Trigger: TCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGCAGATGCACCCAGAGCCCCATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR GCA 90 bp | ACACACAAGGGAGTGGAAGCTAAGAGCCGGGAGGGGGCCGGTGAAGGGAGGGAGGCCCACATGAGCTTCTaGTCCAGGCGGCCGCGCGAG | + |
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Preference number: 4 (lower is better) Translates to: THKGVEAKSREGAGEGREAHMSF*SRRPRE Trigger: CTCGCGCGGCCGCCTGGAGCAGAAGCTCATGTGGGC...CTCCCTCCCTTCACCGGCCCCCTCCCGGCTCTTAGCTTCCACTCCCTTGTGTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCGTCGGGCCTTGGGGCTaGTGGGTGGGTAAGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AHLSMGLCVCERPNTESSVGPWG*WVGKGA Trigger: GGCCCCCTTACCCACCCACCAGCCCCAAGGCCCGAC...GGAGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR TCA 90 bp | CCGTGGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTGGGGCCCGTGGGTAAGGGGGCCTaGCTGAGGGGCAGACCAACC | + |
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Preference number: 4 (lower is better) Translates to: PWVCVYPSAKRQAGFLGPVGKGA*LRGRPT Trigger: GGTTGGTCTGCCCCTCAGTCAGGCCCCCTTACCCAC...GGGCCCCAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR TCA 90 bp | CCTGGAAGGTTTCACTTGGTGGCTTGGCCTAGGGACCAGCAAGGGCTGGGGTGGTTTTGGCCCCGCGGATaGACTCCTCCAAGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: PGRFHLVAWPRDQQGLGWFWPRG*TPPRTA Trigger: AGCTGTCCTTGGAGGAGTTCATCCGCGGGGCCAAAA...CCACCCCAGCCCTTGCTGGTCCCTAGGCCAAGCCACCAAGTGAAACCTTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR TCA 90 bp | CTCCGTGGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTGGGGCGTAAGGGGGCCTGACTaGGGGGCAGACCAACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LRGSVCIQVLKGRLAFWGVRGPD*GADQPS Trigger: GCTGGGTTGGTCTGCCCCTCAGTCAGGCCCCCTTAC...GCCCCAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR GCA 90 bp | GGGGGCCTGACTGAGGGGCAGACCAACCCAGCCTGTGTCTCTATTGTTGCCTCTCCGCAAGCTGAGACCTaGAAGAAGGGGACTGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GGLTEGQTNPACVSIVASPQAET*KKGTAP Trigger: AGGGGCAGTCCCCTTCTTGCAGGTCTCAGCTTGCGG...AGAGGCAACAATAGAGACACAGGCTGGGTTGGTCTGCCCCTCAGTCAGGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR GCA 90 bp | CCTGGAAGGTTTCACTTGGTGGCTTGGCCTAGGGACCAGCAAGGGCTGGGGTGGGGCTCTGGGTGCATCTaGCCATCTGTCTATGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PGRFHLVAWPRDQQGLGWGSGCI*PSVYGP Trigger: AGGCCCATAGACAGATGGGCAGATGCACCCAGAGCC...CCACCCCAGCCCTTGCTGGTCCCTAGGCCAAGCCACCAAGTGAAACCTTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GGACCGTGTCTCTTTCCCACGCAGGACACTGTGCATGGGGCTCTGGGTGCATCTTGTTCTGCTTGCCCATaGCCGCCGAGCCAAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GPCLFPTQDTVHGALGASCSACP*PPSQVP Trigger: TGGGACTTGGCTCGGCGGCCATGGGCAAGCAGAACA...AGATGCACCCAGAGCCCCATGCACAGTGTCCTGCGTGGGAAAGAGACACGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GGGAGAAGGGCTTCCCCAATCTGGCCCCCAGCCAGAATACACACAAGGGAGTGGGCAGGACACTGTGCATaGGGCTCTGGGTGCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRRASPIWPPARIHTREWAGHCA*GSGCIC Trigger: GCAGATGCACCCAGAGCCCCATGCACAGTGTCCTGC...CCACTCCCTTGTGTGTATTCTGGCTGGGGGCCAGATTGGGGAAGCCCTTCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGCTTTCTGGGGCCCACAGCTGGCGGGCTAGTATCCTGGAAGGTTTCAGGAGGAAGGGGAACCTaGCTCCTCTCAGAACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QAGFLGPTAGGLVSWKVSGGRGT*LLSELG Trigger: TCCCAGTTCTGAGAGGAGCCAGGTTCCCCTTCCTCC...TGAAACCTTCCAGGATACTAGCCCGCCAGCTGTGGGCCCCAGAAAGCCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | ACCGCTTACTTGCTTTGGCCTGGGGGTACCGCAGGGTTCCCTTTTCCGGAAGCCAGGGCTTCCCCAATCTaGCCCCCAGCCAGAATACAC | + |
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Preference number: 4 (lower is better) Translates to: TAYLLWPGGTAGFPFPEARASPI*PPARIH Trigger: GTGTATTCTGGCTGGGGGCCAGATTGGGGAAGCCCT...GGCTTCCGGAAAAGGGAACCCTGCGGTACCCCCAGGCCAAAGCAAGTAAGCGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTGACTGAGGGGCAGACCAACCCAGCCTGTGTCTCTATTGTTGCCTCTTTACTTGCTTTGGCCTaGGGGTACCGCAGGGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GGLTEGQTNPACVSIVASLLALA*GYRRVP Trigger: GGGAACCCTGCGGTACCCCCAGGCCAAAGCAAGTAA...AGAGGCAACAATAGAGACACAGGCTGGGTTGGTCTGCCCCTCAGTCAGGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GGGAGAAGGGCTTCCCCAATCTGGCCCCCAGCCAGAATACACACAAGGGAGTGGCGTGCTCGGCAAACTTaGAGGCGTCACCATAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: GRRASPIWPPARIHTREWRARQT*RRHHRE Trigger: TTCCCTATGGTGACGCCTCCAAGTTTGCCGAGCACG...CCACTCCCTTGTGTGTATTCTGGCTGGGGGCCAGATTGGGGAAGCCCTTCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCACCGCTTACTTGCTTTaGCCTGGGGGTACCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: AHLSMGLCVCERPNTESSTAYLL*PGGTAG Trigger: CCCTGCGGTACCCCCAGGCCAAAGCAAGTAAGCGGT...GGAGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | CTCAAGGAAGCCTCTTTCTCCAACTCCACACCCCTAGAATCCTTCTCTCCCCTCGGGACCAGCAAGGGCTaGGGTGGGAAGGGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LKEASFSNSTPLESFSPLGTSKG*GGKGGS Trigger: TGAGCCACCCTTCCCACCCCAGCCCTTGCTGGTCCC...GAGGGGAGAGAAGGATTCTAGGGGTGTGGAGTTGGAGAAAGAGGCTTCCTTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTGACTGAGGGGCAGACCAACCCAGCCTGTGTCTCTATTGTTGCCTCTTTTCACTTGGTGGCTTaGCCTAGGGACCAGCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: GGLTEGQTNPACVSIVASFHLVA*PRDQQG Trigger: CCCTTGCTGGTCCCTAGGCCAAGCCACCAAGTGAAA...AGAGGCAACAATAGAGACACAGGCTGGGTTGGTCTGCCCCTCAGTCAGGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GGGAGAAGGGCTTCCCCAATCTGGCCCCCAGCCAGAATACACACAAGGGAGTGGGGCGGGCTAGTATCCTaGAAGGTTTCACTTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GRRASPIWPPARIHTREWGGLVS*KVSLGG Trigger: GCCACCAAGTGAAACCTTCCAGGATACTAGCCCGCC...CCACTCCCTTGTGTGTATTCTGGCTGGGGGCCAGATTGGGGAAGCCCTTCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR TCA 90 bp | GCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCGGGCCTGTGTGTGTGTaGGAGGCCAAACACAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: AHLSMGLCVCERPNTESSGPVCV*EAKHRE Trigger: CTCTCTGTGTTTGGCCTCTCACACACACACAGGCCC...GGAGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR GCA 90 bp | CTGCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCACGCAGGACACTGTaGATGGGGCTCTGGGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LPICLWACVCVRGQTQRAPRRTL*MGLWVH Trigger: ATGCACCCAGAGCCCCATGCACAGTGTCCTGCGTGG...AGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | CCGTGGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTGGGGCCCTGTTGCCTCTGGGATTaGGGGGTGCTAACCGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: PWVCVYPSAKRQAGFLGPCCLWD*GVLTAY Trigger: GTAAGCGGTTAGCACCCCCCAATCCCAGAGGCAACA...GGGCCCCAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | CCGTGGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTGGGGCCCGAAGGTTTCACTTGGTaGCTTGGCCTAGGGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PWVCVYPSAKRQAGFLGPEGFTW*LGLGTS Trigger: GCTGGTCCCTAGGCCAAGCCACCAAGTGAAACCTTC...GGGCCCCAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | CCGTGGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTGGGGCCCCTGGAAGGTTTCACTTaGTGGCTTGGCCTAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: PWVCVYPSAKRQAGFLGPLEGFT*WLGLGT Trigger: GGTCCCTAGGCCAAGCCACCAAGTGAAACCTTCCAG...GGGCCCCAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTGACTGAGGGGCAGACCAACCCAGCCTGTGTCTCTATTGTTGCCTCTCTGCCCATCTGTCTATaGGCCTGTGTGTGTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GGLTEGQTNPACVSIVASLPICL*ACVCVR Trigger: TCTCACACACACACAGGCCCATAGACAGATGGGCAG...AGAGGCAACAATAGAGACACAGGCTGGGTTGGTCTGCCCCTCAGTCAGGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | CTCCGTGGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTGGGGCCTGTGCATGGGGCTCTaGGTGCATCTGCCCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: LRGSVCIQVLKGRLAFWGLCMGL*VHLPIC Trigger: ACAGATGGGCAGATGCACCCAGAGCCCCATGCACAG...GCCCCAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR GCA 90 bp | CTCAAGGAAGCCTCTTTCTCCAACTCCACACCCCTAGAATCCTTCTCTCCCCTCGCTTGCTGTTCTGCTTaGCCATGGCCGCCGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LKEASFSNSTPLESFSPLACCSA*PWPPSQ Trigger: TTGGCTCGGCGGCCATGGGCAAGCAGAACAGCAAGC...GAGGGGAGAGAAGGATTCTAGGGGTGTGGAGTTGGAGAAAGAGGCTTCCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR GCA 90 bp | GCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCGCATGGGGCTCTGGGTaGATCTGCCCATCTGTCTAT | + |
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Preference number: 4 (lower is better) Translates to: AHLSMGLCVCERPNTESSAWGSG*ICPSVY Trigger: ATAGACAGATGGGCAGATGCACCCAGAGCCCCATGC...GGAGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GGGAGAAGGGCTTCCCCAATCTGGCCCCCAGCCAGAATACACACAAGGGAGTGGACTCCCGAAAGTCTATaGTGCCATCGCTGTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GRRASPIWPPARIHTREWTPESL*CHRCWC Trigger: ACACCAACAGCGATGGCACCATAGACTTTCGGGAGT...CCACTCCCTTGTGTGTATTCTGGCTGGGGGCCAGATTGGGGAAGCCCTTCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | CTCAAGGAAGCCTCTTTCTCCAACTCCACACCCCTAGAATCCTTCTCTCCCCTCTCTGGGGCCCACAGCTaGCGGGCTAGTATCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LKEASFSNSTPLESFSPLSGAHS*RASILE Trigger: TTCCAGGATACTAGCCCGCCAGCTGTGGGCCCCAGA...GAGGGGAGAGAAGGATTCTAGGGGTGTGGAGTTGGAGAAAGAGGCTTCCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCATACACACAAGGGAGTaGAAGCTAAGAGCCGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AHLSMGLCVCERPNTESSIHTRE*KLRAGR Trigger: CCTCCCGGCTCTTAGCTTCCACTCCCTTGTGTGTAT...GGAGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | GGGAGAAGGGCTTCCCCAATCTGGCCCCCAGCCAGAATACACACAAGGGAGTGGAAACCATCTTGTAAATaGCCTGCACGATCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GRRASPIWPPARIHTREWKPSCK*PARSPA Trigger: TGCTGGAGATCGTGCAGGCCATTTACAAGATGGTTT...CCACTCCCTTGTGTGTATTCTGGCTGGGGGCCAGATTGGGGAAGCCCTTCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | CTCCGTGGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTGGGGCACACAGAGAGCTCCGTaGGTCTGTGTGTATCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LRGSVCIQVLKGRLAFWGTQRAP*VCVYPS Trigger: ACTTGGATACACACAGACCCACGGAGCTCTCTGTGT...GCCCCAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR GCA 90 bp | CTGCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTCCCGAAAGTCTATGGTaGCATCGCTGTTGGTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LPICLWACVCVRGQTQRAPESLW*HRCWCQ Trigger: TTGACACCAACAGCGATGGCACCATAGACTTTCGGG...AGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGCTTTCTGGGGCCCACAGCTGGCGGGCTAGTATCCTGGAAGGTTTCATTGTTTGTGTCCATTTaGCGGAAGATTTTCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: QAGFLGPTAGGLVSWKVSLFVSI*RKIFSV Trigger: GACTGAGAAAATCTTCCGCCAAATGGACACAAACAA...TGAAACCTTCCAGGATACTAGCCCGCCAGCTGTGGGCCCCAGAAAGCCAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS GCA 90 bp | GCACAGTGCTGCGCTACGTGGGCACCCCTCAAGATGCGGTGGCTCTaGAGTACTGCGTGGTCAACATCCTCTCTGTCACTTCCGCCATCG | + |
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Preference number: 5 (lower is better) Translates to: AQCCATWAPLKMRWL*STAWSTSSLSLPPS Trigger: CGATGGCGGAAGTGACAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGCGCAGCACTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS CCA 90 bp | GCTTCATCACAGCTGCCCTGTTCCATGGCACAGTGCTGCGCTACGTaGGCACCCCTCAAGATGCGGTGGCTCTGCAGTACTGCGTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: ASSQLPCSMAQCCAT*APLKMRWLCSTAWS Trigger: TGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGCGCAGCACTGTGCCATGGAACAGGGCAGCTGTGATGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS GCA 90 bp | CTGCGCTACGTGGGCACCCCTCAAGATGCGGTGGCTCTGCAGTACTaGGTGGTCAACATCCTCTCTGTCACTTCCGCCATCGTGGTATGG | + |
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Preference number: 5 (lower is better) Translates to: LRYVGTPQDAVALQY*VVNILSVTSAIVVW Trigger: CCATACCACGATGGCGGAAGTGACAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS GCA 90 bp | CCTGTTCCATGGCACAGTGCTGCGCTACGTGGGCACCCCTCAAGATaGGGTGGCTCTGCAGTACTGCGTGGTCAACATCCTCTCTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: PVPWHSAALRGHPSR*GGSAVLRGQHPLCH Trigger: GTGACAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGCGCAGCACTGTGCCATGGAACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS CCA 90 bp | GCTACGTGGGCACCCCTCAAGATGCGGTGGCTCTGCAGTACTGCGTaGTCAACATCCTCTCTGTCACTTCCGCCATCGTGGTATGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ATWAPLKMRWLCSTA*STSSLSLPPSWYGQ Trigger: CTGGCCATACCACGATGGCGGAAGTGACAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS CCA 90 bp | TCCATGGCACAGTGCTGCGCTACGTGGGCACCCCTCAAGATGCGGTaGCTCTGCAGTACTGCGTGGTCAACATCCTCTCTGTCACTTCCG | + |
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Preference number: 5 (lower is better) Translates to: SMAQCCATWAPLKMR*LCSTAWSTSSLSLP Trigger: CGGAAGTGACAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGCGCAGCACTGTGCCATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS-3UTR CAA 90 bp | CCTGGAAGGTTTCACTTGGTGGCTTGGCCTAGGGACCAGCAAGGGCTGGGGTGGGACAGCTTGCCGTCGTaGTTTGTGTCCATTTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: PGRFHLVAWPRDQQGLGWDSLPS*FVSIWR Trigger: CCGCCAAATGGACACAAACAACGACGGCAAGCTGTC...CCACCCCAGCCCTTGCTGGTCCCTAGGCCAAGCCACCAAGTGAAACCTTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CAA 90 bp | CAGGCTGGCTTTCTGGGGCCCACAGCTGGCGGGCTAGTATCCTGGAAGGTTTCACCTGGAAGGTTTCACTaGGTGGCTTGGCCTAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: QAGFLGPTAGGLVSWKVSPGRFH*VAWPRD Trigger: GTCCCTAGGCCAAGCCACCAAGTGAAACCTTCCAGG...TGAAACCTTCCAGGATACTAGCCCGCCAGCTGTGGGCCCCAGAAAGCCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CAA 90 bp | GGACCGTGTCTCTTTCCCACGCAGGACACTGTGCATGGGGCTCTGGGTGCATCTGCTTGCCGTCGTTGTTaGTGTCCATTTGGCGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: GPCLFPTQDTVHGALGASACRRC*CPFGGR Trigger: TCTTCCGCCAAATGGACACAAACAACGACGGCAAGC...AGATGCACCCAGAGCCCCATGCACAGTGTCCTGCGTGGGAAAGAGACACGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CAA 90 bp | CTGCCCATCTGTCTATGGGCCTGTGTGTGTGTGAGAGGCCAAACACAGAGAGCTAACCGCTTACTTGCTTaGGCCTGGGGGTACCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LPICLWACVCVRGQTQRANRLLA*AWGYRR Trigger: CCTGCGGTACCCCCAGGCCAAAGCAAGTAAGCGGTT...AGCTCTCTGTGTTTGGCCTCTCACACACACACAGGCCCATAGACAGATGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CAA 90 bp | CTCCGTGGGTCTGTGTGTATCCAAGTGCTAAAAGGCAGGCTGGCTTTCTGGGGCGTGCTAACCGCTTACTaGCTTTGGCCTGGGGGTACC | + |
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Preference number: 5 (lower is better) Translates to: LRGSVCIQVLKGRLAFWGVLTAY*LWPGGT Trigger: GGTACCCCCAGGCCAAAGCAAGTAAGCGGTTAGCAC...GCCCCAGAAAGCCAGCCTGCCTTTTAGCACTTGGATACACACAGACCCACGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CAA 90 bp | CAGGCTGGCTTTCTGGGGCCCACAGCTGGCGGGCTAGTATCCTGGAAGGTTTCATTGAACTCATCCACATaGAGGATTCCTGTGGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QAGFLGPTAGGLVSWKVSLNSST*RIPVGQ Trigger: CTGCCCCACAGGAATCCTCAATGTGGATGAGTTCAA...TGAAACCTTCCAGGATACTAGCCCGCCAGCTGTGGGCCCCAGAAAGCCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS-3UTR CAA 90 bp | CTCAAGGAAGCCTCTTTCTCCAACTCCACACCCCTAGAATCCTTCTCTCCCCTCGTTGTTTGTGTCCATTaGGCGGAAGATTTTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LKEASFSNSTPLESFSPLVVCVH*AEDFLS Trigger: ACTGAGAAAATCTTCCGCCAAATGGACACAAACAAC...GAGGGGAGAGAAGGATTCTAGGGGTGTGGAGTTGGAGAAAGAGGCTTCCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373467.4 |
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| CDS CAA 72 bp | CTGGGCTCTGAGCCGCACGTCGCTTCGAGGGCCGAATaGGCACCCTGGGCACCCTCCCTGCTCCTGCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LGSEPHVASRAE*APWAPSLLLRL Trigger: GAGGCGCAGGAGCAGGGAGGGTGCCCAGGGTGCCAATTCGGCCCTCGAAGCGACGTGCGGCTCAGAGCCCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470166.5 |
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| CDS CCA 72 bp | TGGGCTCTGAGCCGCACGTCGCTTCGAGGGCCGAATTaGCACCCTGGGCACCCTCCCTGCTCCTGCGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: WALSRTSLRGPN*HPGHPPCSCAS Trigger: TGAGGCGCAGGAGCAGGGAGGGTGCCCAGGGTGCCAATTCGGCCCTCGAAGCGACGTGCGGCTCAGAGCCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470166.5 |
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| CDS CCA 72 bp | GCGTGGTCAACATCCTCTCTGTCACTTCCGCCATCGTaGTATGGCCAGGCTGGGAGGGTGGTTGGTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: AWSTSSLSLPPS*YGQAGRVVGGR Trigger: CCTCCCACCAACCACCCTCCCAGCCTGGCCATACCACGATGGCGGAAGTGACAGAGAGGATGTTGACCACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS CCA 72 bp | CAGCTGCCCTGTTCCATGGCACAGTGCTGCGCTACGTaGGCACCCCTCAAGATGCGGTGGCTCTGCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: QLPCSMAQCCAT*APLKMRWLCST Trigger: AGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGCGCAGCACTGTGCCATGGAACAGGGCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS GCA 72 bp | TGGCACAGTGCTGCGCTACGTGGGCACCCCTCAAGATaGGGTGGCTCTGCAGTACTGCGTGGTCAACATCCT | + |
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Preference number: 6 (lower is better) Translates to: WHSAALRGHPSR*GGSAVLRGQHP Trigger: AGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGCGCAGCACTGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS CCA 72 bp | CAGTGCTGCGCTACGTGGGCACCCCTCAAGATGCGGTaGCTCTGCAGTACTGCGTGGTCAACATCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QCCATWAPLKMR*LCSTAWSTSSL Trigger: CAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGCGCAGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS GCA 72 bp | GTGGGCACCCCTCAAGATGCGGTGGCTCTGCAGTACTaGGTGGTCAACATCCTCTCTGTCACTTCCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: VGTPQDAVALQY*VVNILSVTSAI Trigger: GATGGCGGAAGTGACAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS CCA 72 bp | GCACCCCTCAAGATGCGGTGGCTCTGCAGTACTGCGTaGTCAACATCCTCTCTGTCACTTCCGCCATCGTGG | + |
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Preference number: 6 (lower is better) Translates to: APLKMRWLCSTA*STSSLSLPPSW Trigger: CCACGATGGCGGAAGTGACAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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| CDS GCA 72 bp | TGCGCTACGTGGGCACCCCTCAAGATGCGGTGGCTCTaGAGTACTGCGTGGTCAACATCCTCTCTGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: CATWAPLKMRWL*STAWSTSSLSL Trigger: AAGTGACAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTTGAGGGGTGCCCACGTAGCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470896.1 |
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