Pregenerated sensors for HPAT5 (Homo sapiens)

Ensembl gene IDs: ENSG00000280707

Ensembl transcript IDs: ENST00000625787.2, ENST00000626424.1, ENST00000628362.2

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATTGGAGAGATTTATTTCGAGCCAAACGTGAGTGACCACAGCCCGTaGCACAGTCCTCAGGAGACCCGGAGAACGTGTGACCCAGGTGAT	+
Preference number: 5 (lower is better) Translates to: IGEIYFEPNVSDHSP*HSPQETRRTCDPGD Trigger: ATCACCTGGGTCACACGTTCTCCGGGTCTCCTGAGGACTGTGTCACGGGCTGTGGTCACTCACGTTTGGCTCGAAATAAATCTCTCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626424.1 ENST00000628362.2
CDS TCA 90 bp	CGTCTTCCTGCACAGGTCAGGAACCTTGTACAGGAACTGCATAGATaGGGTATGAGGTCAGATTCCCCAAGAGACTTATACCTGATTATA	+
Preference number: 5 (lower is better) Translates to: RLPAQVRNLVQELHR*GMRSDSPRDLYLII Trigger: TATAATCAGGTATAAGTCTCTTGGGGAATCTGACCTCATACCTCATCTATGCAGTTCCTGTACAAGGTTCCTGACCTGTGCAGGAAGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625787.2
CDS GCA 72 bp	TTTGCCGGCATACCAGGTTTCCGGGCTCCCTTTCTCTaGAGCTTCCAGAAGAATGGAGCAGCTCTGATGACC	+
Preference number: 6 (lower is better) Translates to: FAGIPGFRAPFL*SFQKNGAALMT Trigger: GGTCATCAGAGCTGCTCCATTCTTCTGGAAGCTGCAGAGAAAGGGAGCCCGGAAACCTGGTATGCCGGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625787.2 ENST00000628362.2
CDS GCA 72 bp	TCAGCCAAGATCGTGTCATTGCACTCCAGCCCTTTTTaGCGGCATACCAGGTTTCCGGGCTCCCTTTCTCTG	+
Preference number: 6 (lower is better) Translates to: SAKIVSLHSSPF*RHTRFPGSLSL Trigger: CAGAGAAAGGGAGCCCGGAAACCTGGTATGCCGGCAAAAAGGGCTGGAGTGCAATGACACGATCTTGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625787.2
CDS CAA 72 bp	GTCAGCCAAGATCGTGTCATTGCACTCCAGCCCTTTTaGCCGGCATACCAGGTTTCCGGGCTCCCTTTCTCT	+
Preference number: 6 (lower is better) Translates to: VSQDRVIALQPF*PAYQVSGLPFS Trigger: AGAGAAAGGGAGCCCGGAAACCTGGTATGCCGGCAAAAAGGGCTGGAGTGCAATGACACGATCTTGGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625787.2
CDS TCA 72 bp	ATTTATTTCGAGCCAAACGTGAGTGACCACAGCCCGTaGCACAGTCCTCAGGAGACCCGGAGAACGTGTGAC	+
Preference number: 6 (lower is better) Translates to: IYFEPNVSDHSP*HSPQETRRTCD Trigger: GTCACACGTTCTCCGGGTCTCCTGAGGACTGTGTCACGGGCTGTGGTCACTCACGTTTGGCTCGAAATAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626424.1 ENST00000628362.2
CDS CAA 72 bp	GGGCGACAAGAGTACAAGAGTGAAACTCCATCCTTTTaGCCGGCATACCAGGTTTCCGGGCTCCCTTTCTCT	+
Preference number: 6 (lower is better) Translates to: GRQEYKSETPSF*PAYQVSGLPFS Trigger: AGAGAAAGGGAGCCCGGAAACCTGGTATGCCGGCAAAAAGGATGGAGTTTCACTCTTGTACTCTTGTCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628362.2
CDS CCA 72 bp	GTTCCTCCCAAAGTTAATTCAGCCTCGGTCCAAGAATaGACAAGGACAGCTTGCAGGTTAGAAGCAAGATGG	+
Preference number: 6 (lower is better) Translates to: VPPKVNSASVQE*TRTACRLEARW Trigger: CCATCTTGCTTCTAACCTGCAAGCTGTCCTTGTCCATTCTTGGACCGAGGCTGAATTAACTTTGGGAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625787.2
CDS TCA 72 bp	TTAGGGAGGGTCAGAATCTTGTACCCTCCAGCTACATaGCTCCTCCACCATGATTTCTTATCTCGTGGTTAT	+
Preference number: 6 (lower is better) Translates to: LGRVRILYPPAT*LLHHDFLSRGY Trigger: ATAACCACGAGATAAGAAATCATGGTGGAGGAGTCATGTAGCTGGAGGGTACAAGATTCTGACCCTCCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625787.2
CDS CAA 90 bp	AGGCTTCCAGATCACAGGCAGATTCACAGATTTTCTGATTGGCAGTaGGTTGAAAGAGTTTATCTAAAGACCACAGGTCAGGAACCTTGT	+
Preference number: 6 (lower is better) Translates to: RLPDHRQIHRFSDWQ*VERVYLKTTGQEPC Trigger: ACAAGGTTCCTGACCTGTGGTCTTTAGATAAACTCTTTCAACCAACTGCCAATCAGAAAATCTGTGAATCTGCCTGTGATCTGGAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628362.2
CDS CCA 72 bp	GGCAATTTAGTCTTCAGGCAAGAAGGAGGTCTGCTTTaGGAAAGGGCTGTTACCGTCTTTGATTTAAACTAT	+
Preference number: 6 (lower is better) Translates to: GNLVFRQEGGLL*ERAVTVFDLNY Trigger: ATAGTTTAAATCAAAGACGGTAACAGCCCTTTCCCAAAGCAGACCTCCTTCTTGCCTGAAGACTAAATTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625787.2
CDS CAA 90 bp	AGGCTTCCAGATCACAGGCAGATTCACAGATTTTCTGATTGGCAGTaGGTTGAAAGAGTTTATCTAAAGACCTGTAATCCCATCTGCTCA	+
Preference number: 6 (lower is better) Translates to: RLPDHRQIHRFSDWQ*VERVYLKTCNPICS Trigger: TGAGCAGATGGGATTACAGGTCTTTAGATAAACTCTTTCAACCAACTGCCAATCAGAAAATCTGTGAATCTGCCTGTGATCTGGAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626424.1
CDS CAA 72 bp	GATCACAGGCAGATTCACAGATTTTCTGATTGGCAGTaGGTTGAAAGAGTTTATCTAAAGACCACAGGTCAG	+
Preference number: 6 (lower is better) Translates to: DHRQIHRFSDWQ*VERVYLKTTGQ Trigger: CTGACCTGTGGTCTTTAGATAAACTCTTTCAACCAACTGCCAATCAGAAAATCTGTGAATCTGCCTGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628362.2
CDS CCA 72 bp	CTTCCAGATCACAGGCAGATTCACAGATTTTCTGATTaGCAGTTGGTTGAAAGAGTTTATCTAAAGACCTGT	+
Preference number: 6 (lower is better) Translates to: LPDHRQIHRFSD*QLVERVYLKTC Trigger: ACAGGTCTTTAGATAAACTCTTTCAACCAACTGCCAATCAGAAAATCTGTGAATCTGCCTGTGATCTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626424.1
CDS CCA 72 bp	CTTCCAGATCACAGGCAGATTCACAGATTTTCTGATTaGCAGTTGGTTGAAAGAGTTTATCTAAAGACCACA	+
Preference number: 6 (lower is better) Translates to: LPDHRQIHRFSD*QLVERVYLKTT Trigger: TGTGGTCTTTAGATAAACTCTTTCAACCAACTGCCAATCAGAAAATCTGTGAATCTGCCTGTGATCTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628362.2