RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HP1BP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000127483

Ensembl transcript IDs: ENST00000312239.10, ENST00000375000.5, ENST00000375003.6, ENST00000414993.1, ENST00000417710.5, ENST00000419490.5, ENST00000419948.5, ENST00000424732.5, ENST00000437575.5, ENST00000438032.6, ENST00000443615.1, ENST00000487117.1, ENST00000488722.5, ENST00000491748.1

Found 356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGAGGTGGGGAGAACTGCTTGAGCACACGAGTTCAAAGCTGCAGTaGGCCAAGATCACACCACTGCGCTGCAGCCTTAGTGACACAGCA +
Preference number: 1 (lower is better)
Translates to: LRWGELLEHTSSKLQ*AKITPLRCSLSDTA
Trigger: TGCTGTGTCACTAAGGCTGCAGCGCAGTGGTGTGATCTTGGCTCACTGCAGCTTTGAACTCGTGTGCTCAAGCAGTTCTCCCCACCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR CCA 90 bp GCCACCAACAGAGTACTGAAGCTATTGATCCATGCTAGAGATTTCTaGGATTACCTCTGGGGTTTGTTGTTCCCCTTTCTGAACATGGAA +
Preference number: 1 (lower is better)
Translates to: ATNRVLKLLIHARDF*DYLWGLLFPFLNME
Trigger: TTCCATGTTCAGAAAGGGGAACAACAAACCCCAGAGGTAATCCCAGAAATCTCTAGCATGGATCAATAGCTTCAGTACTCTGTTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR TCA 90 bp CCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATaGATAAGAAACAAACATCTTTTGCCTCTGGCAGTACTCAAGGGG +
Preference number: 1 (lower is better)
Translates to: PYFRLQKGSQETKVE*IRNKHLLPLAVLKG
Trigger: CCCCTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTCTTATTCATTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR GCA 90 bp ACAAATCTTTGTCAAGTGGTTCCTAAGCCAAAACTTCAACAGTTCTaGTTCCTTGGCTTTGGCTCTGCAGAAGTGAGTGACCATCTGTTC +
Preference number: 1 (lower is better)
Translates to: TNLCQVVPKPKLQQF*FLGFGSAEVSDHLF
Trigger: GAACAGATGGTCACTCACTTCTGCAGAGCCAAAGCCAAGGAAGCAGAACTGTTGAAGTTTTGGCTTAGGAACCACTTGACAAAGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR CCA 90 bp GTACTGAAGCTATTGATCCATGCTAGAGATTTCTGGGATTACCTCTaGGGTTTGTTGTTCCCCTTTCTGAACATGGAAGTAAAAATTATA +
Preference number: 1 (lower is better)
Translates to: VLKLLIHARDFWDYL*GLLFPFLNMEVKII
Trigger: TATAATTTTTACTTCCATGTTCAGAAAGGGGAACAACAAACCCCAGAGGTAATCCCAGAAATCTCTAGCATGGATCAATAGCTTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR CCA 90 bp AAAGGAGTCATATATCTTCAAAATCTAATGAGATCACCCTGTTTTTaGCTTATTCCCAAAGCTGTCTCTGTGTTTACAGTTGGAGAGAAA +
Preference number: 1 (lower is better)
Translates to: KGVIYLQNLMRSPCF*LIPKAVSVFTVGEK
Trigger: TTTCTCTCCAACTGTAAACACAGAGACAGCTTTGGGAATAAGCCAAAAACAGGGTGATCTCATTAGATTTTGAAGATATATGACTCCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR TCA 90 bp GATTTACAACAGGAAAGATTGCCTTACATGCAACACAAATTCCAATaGATTCATGATGGGATCACACATGATTATGATCTAATTCAAGCC +
Preference number: 1 (lower is better)
Translates to: DLQQERLPYMQHKFQ*IHDGITHDYDLIQA
Trigger: GGCTTGAATTAGATCATAATCATGTGTGATCCCATCATGAATTCATTGGAATTTGTGTTGCATGTAAGGCAATCTTTCCTGTTGTAAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACTGGGCGTGGTCGTGTaGGCCTGTAGGACCCAACTC +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVELGVVV*ACRTQL
Trigger: GAGTTGGGTCCTACAGGCGCACACGACCACGCCCAG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGGTGGGAGAATCGCTTaGACCTGGGAGGCGGAGTTT +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEGGRIA*TWEAEF
Trigger: AAACTCCGCCTCCCAGGTTCAAGCGATTCTCCCACC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATTTGGGAGGCTGAGGTaGGTGGATCACGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEFGRLR*VDHEVR
Trigger: CCTGACCTCGTGATCCACTCACCTCAGCCTCCCAAA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAGGATTTTGGGAGGCTaGGGTGAGTGGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVERILGG*GEWITR
Trigger: CCTCGTGATCCACTCACCTCAGCCTCCCAAAATCCT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACTGGGAGGCGGAGTTTaGAGTGAGCCAAGATCACAC +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVELGGGV*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAAACTCCGCCTCCCAG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR TCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGGCACTCCGGGGCACCTaGGCAAGACTCCGTCTCAAA +
Preference number: 2 (lower is better)
Translates to: VKKPTISLPALSETHLSKALRGT*ARLRLK
Trigger: TTTGAGACGGAGTCTTGCTCAGGTGCCCCGGAGTGC...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR TCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGTTTGGGAGGCTGAGGTaGGTGGATCACGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: VKKPTISLPALSETHLSKFGRLR*VDHEVR
Trigger: CCTGACCTCGTGATCCACTCACCTCAGCCTCCCAAA...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACTTCCAGGACCTGACTaGCATACCGTTCTTGATGCT +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVELPGPD*HTVLDA
Trigger: AGCATCAAGAACGGTATGCCAGTCAGGTCCTGGAAG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGAGGATTTTGGGAGGCTaGGGTGAGTGGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMRILGG*GEWITR
Trigger: CCTCGTGATCCACTCACCTCAGCCTCCCAAAATCCT...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAGGAAGCCACTTGCTTaGTATCAAAAGTGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVERKPLA*YQKCCG
Trigger: TCCACAGCACTTTTGATATCAAGCAAGTGGCTTCCT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGAGCAGGAGAATTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMSRRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCT...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR TCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAGGTGGGAGAATCGCTTaGACCTGGGAGGCGGAGTTT +
Preference number: 2 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGGGRIA*TWEAEF
Trigger: AAACTCCGCCTCCCAGGTTCAAGCGATTCTCCCACC...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGCGTGGAAGAGTGCGATaGCCTTCCTGTCTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMRGRVR*PSCLFP
Trigger: AGGGAAAAGACAGGAAGGTCATCGCACTCTTCCACG...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGTCAGTGCTATATTGTaGCTCCATTTTACTTCCAGG +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEVSAIL*LHFTSR
Trigger: CCTGGAAGTAAAATGGAGGCACAATATAGCACTGAC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGAAACAAACATCTTTTaGCTCTGGCAGTACTCAAGG +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEETNIF*LWQYSR
Trigger: CCTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR CCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGGTAACCCCAGGATTTTaGGAGGCTGAGGTGAGTGGA +
Preference number: 2 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMVTPGF*EAEVSG
Trigger: TCCACTCACCTCAGCCTCCCAAAATCCTGGGGTTAC...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGATATAGAGAACTTGTaGTTGCTGTTAAGGGAATGC +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEDIENL*LLLREC
Trigger: GCATTCCCTTAACAGCAAGCACAAGTTCTCTATATC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACTCTGTGTTTACAGTTaGAGAGAAAAGGTTAGTGGA +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVELCVYS*REKVSG
Trigger: TCCACTAACCTTTTCTCTCCAACTGTAAACACAGAG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGGGAATGCAATACTTTaGGCCAGTGAAAAATACCTA +
Preference number: 2 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEGNAIL*ASEKYL
Trigger: TAGGTATTTTTCACTGGCCCAAAGTATTGCATTCCC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR GCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGATGTTCGTGGAAGAGTaGGATGACCTTCCTGTCTTT +
Preference number: 2 (lower is better)
Translates to: VKKPTISLPALSETHLSKMFVEE*DDLPVF
Trigger: AAAGACAGGAAGGTCATCGCACTCTTCCACGAACAT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR TCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGATATTACAGCTATAACTaGAGTCTCCAGGCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGYYSYN*SLQAGG
Trigger: GCCTCCTGCCTGGAGACTTCAGTTATAGCTGTAATA...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR TCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGAAGGCAAACAAGAAGTaGCAACTCATGCTCCAAATA +
Preference number: 2 (lower is better)
Translates to: VKKPTISLPALSETHLSKKANKK*QLMLQI
Trigger: TATTTGGAGCATGAGTTGTCACTTCTTGTTTGCCTT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGCTCTGTGTTTACAGTTaGAGAGAAAAGGTTAGTGGA +
Preference number: 2 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMLCVYS*REKVSG
Trigger: TCCACTAACCTTTTCTCTCCAACTGTAAACACAGAG...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAATGATCAAGAAGATTTaGGCCGTGAGTGGTAGCTCA +
Preference number: 2 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGMIKKI*AVSGSS
Trigger: TGAGCTACCACTCACGGCCCAAATCTTCTTGATCAT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR CAA 90 bp CAAAGGAGTCATATATCTTCAAAATCTAATGAGATCACCCTGTTTTaGGCTTATTCCCAAAGCTGTCTCTGTGTTTACAGTTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: QRSHISSKSNEITLF*AYSQSCLCVYSWRE
Trigger: TTCTCTCCAACTGTAAACACAGAGACAGCTTTGGGAATAAGCCAAAAACAGGGTGATCTCATTAGATTTTGAAGATATATGACTCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR TCA 72 bp GGAGAACTGCTTGAGCACACGAGTTCAAAGCTGCAGTaGGCCAAGATCACACCACTGCGCTGCAGCCTTAGT +
Preference number: 3 (lower is better)
Translates to: GELLEHTSSKLQ*AKITPLRCSLS
Trigger: ACTAAGGCTGCAGCGCAGTGGTGTGATCTTGGCTCACTGCAGCTTTGAACTCGTGTGCTCAAGCAGTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR GCA 72 bp CGAGTTCAAAGCTGCAGTGAGCCAAGATCACACCACTaGGCTGCAGCCTTAGTGACACAGCAAACTCCATCT +
Preference number: 3 (lower is better)
Translates to: RVQSCSEPRSHH*AAALVTQQTPS
Trigger: AGATGGAGTTTGCTGTGTCACTAAGGCTGCAGCGCAGTGGTGTGATCTTGGCTCACTGCAGCTTTGAACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR GCA 72 bp TGTCAAGTGGTTCCTAAGCCAAAACTTCAACAGTTCTaGTTCCTTGGCTTTGGCTCTGCAGAAGTGAGTGAC +
Preference number: 3 (lower is better)
Translates to: CQVVPKPKLQQF*FLGFGSAEVSD
Trigger: GTCACTCACTTCTGCAGAGCCAAAGCCAAGGAAGCAGAACTGTTGAAGTTTTGGCTTAGGAACCACTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGAGATCACCCTGTTTTaGGCTTATTCCCAAAGCTGT +
Preference number: 3 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEEITLF*AYSQSC
Trigger: ACAGCTTTGGGAATAAGCCAAAAACAGGGTGATCTC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR CCA 72 bp AGTAAGGCGTATGTCTTTGACAGTTGTGGATGTTCGTaGAAGAGTGCGATGACCTTCCTGTCTTTTCCCTTT +
Preference number: 3 (lower is better)
Translates to: SKAYVFDSCGCS*KSAMTFLSFPF
Trigger: AAAGGGAAAAGACAGGAAGGTCATCGCACTCTTCCACGAACATCCACAACTGTCAAAGACATACGCCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATCAGTCAGTGCTATATaGTGCCTCCATTTTACTTCC +
Preference number: 3 (lower is better)
Translates to: ISQPYFRLQKGSQETKVESVSAI*CLHFTS
Trigger: GGAAGTAAAATGGAGGCACAATATAGCACTGACTGA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAGAAACAAACATCTTTaGCCTCTGGCAGTACTCAAG +
Preference number: 3 (lower is better)
Translates to: ISQPYFRLQKGSQETKVERNKHL*PLAVLK
Trigger: CTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTCT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR CCA 72 bp AGAGTACTGAAGCTATTGATCCATGCTAGAGATTTCTaGGATTACCTCTGGGGTTTGTTGTTCCCCTTTCTG +
Preference number: 3 (lower is better)
Translates to: RVLKLLIHARDF*DYLWGLLFPFL
Trigger: CAGAAAGGGGAACAACAAACCCCAGAGGTAATCCCAGAAATCTCTAGCATGGATCAATAGCTTCAGTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAATAGAGAACTTGTGCTaGCTGTTAAGGGAATGCAAT +
Preference number: 3 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEIENLC*LLRECN
Trigger: ATTGCATTCCCTTAACAGCAAGCACAAGTTCTCTAT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAGTGATATAGAGAACTaGTGCTTGCTGTTAAGGGAA +
Preference number: 3 (lower is better)
Translates to: ISQPYFRLQKGSQETKVESDIEN*CLLLRE
Trigger: TTCCCTTAACAGCAAGCACAAGTTCTCTATATCACT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACAAAAAGGAAGCCACTaGCTTGATATCAAAAGTGCT +
Preference number: 3 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEQKGSH*LDIKSA
Trigger: AGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTTG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR CAA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGATGTGTTCTGCTCCTTaGGAATGCCTGGAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: VKKPTISLPALSETHLSKMCSAP*ECLEGK
Trigger: TTTCCCTTCCAGGCATTCCAAAGGAGCAGAACACAT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATACTGGCATACCGTTCTaGATGCTTTCTACAAATATA +
Preference number: 3 (lower is better)
Translates to: TAITEVSRQEALQLSQCYTGIPF*MLSTNI
Trigger: TATATTTGTAGAAAGCATCAAGAACGGTATGCCAGT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAACTGGCATACCGTTCTaGATGCTTTCTACAAATATA +
Preference number: 3 (lower is better)
Translates to: ISQPYFRLQKGSQETKVETGIPF*MLSTNI
Trigger: TATATTTGTAGAAAGCATCAAGAACGGTATGCCAGT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR-3UTR CAA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGTCAGTCAGTGCTATATaGTGCCTCCATTTTACTTCC +
Preference number: 3 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMSVSAI*CLHFTS
Trigger: GGAAGTAAAATGGAGGCACAATATAGCACTGACTGA...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CAA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGATAGAGAACTTGTGCTaGCTGTTAAGGGAATGCAAT +
Preference number: 3 (lower is better)
Translates to: VKKPTISLPALSETHLSKIENLC*LLRECN
Trigger: ATTGCATTCCCTTAACAGCAAGCACAAGTTCTCTAT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CAA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGCAAAAAGGAAGCCACTaGCTTGATATCAAAAGTGCT +
Preference number: 3 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMQKGSH*LDIKSA
Trigger: AGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTTG...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR CCA 72 bp TTATACAGGACCAGGTTTCCTTTAATTAAGTCCATGTaGATGCATAGTCAGAATCCATGTGCAATGAATGCT +
Preference number: 3 (lower is better)
Translates to: LYRTRFPLIKSM*MHSQNPCAMNA
Trigger: AGCATTCATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCTGGTCCTGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR-3UTR CAA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGATTAAGAATCATTACTaGCTAGAGAGCACAGGAGTA +
Preference number: 3 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMIKNHY*LESTGV
Trigger: TACTCCTGTGCTCTCTAGCAAGTAATGATTCTTAAT...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR TCA 72 bp CAGGAAAGATTGCCTTACATGCAACACAAATTCCAATaGATTCATGATGGGATCACACATGATTATGATCTA +
Preference number: 3 (lower is better)
Translates to: QERLPYMQHKFQ*IHDGITHDYDL
Trigger: TAGATCATAATCATGTGTGATCCCATCATGAATTCATTGGAATTTGTGTTGCATGTAAGGCAATCTTTCCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
3UTR CCA 72 bp ATATATCTTCAAAATCTAATGAGATCACCCTGTTTTTaGCTTATTCCCAAAGCTGTCTCTGTGTTTACAGTT +
Preference number: 3 (lower is better)
Translates to: IYLQNLMRSPCF*LIPKAVSVFTV
Trigger: AACTGTAAACACAGAGACAGCTTTGGGAATAAGCCAAAAACAGGGTGATCTCATTAGATTTTGAAGATATAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAGGTGGAGGTTGCAGTaGGCCCAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYRWRLQ*AQIAPL
Trigger: CAGTGGCGCGATCTGGGCTCACTGCAACCTCCACCT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACCCCCGCTGGGCAGCTaGGACTTTAGGTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEPPLGS*DFRCRF
Trigger: AAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGCACTCCGGGGCACCTaGGCAAGACTCCGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEALRGT*ARLRLK
Trigger: TTTGAGACGGAGTCTTGCTCAGGTGCCCCGGAGTGC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGCACTCCGGGGCACCTaGGCAAGACTCCGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYALRGT*ARLRLK
Trigger: TTTGAGACGGAGTCTTGCTCAGGTGCCCCGGAGTGC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCGGAGGGAGGACAGCTTaGGGCCAGGAGTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFGGRTA*GQEFKP
Trigger: GGGCTTGAACTCCTGGCCTCAAGCTGTCCTCCCTCC...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCTGGGCGTGGTCGTGTaGGCCTGTAGGACCCAACTC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLGVVV*ACRTQL
Trigger: GAGTTGGGTCCTACAGGCGCACACGACCACGCCCAG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCTGGGAGGTGGAGGTTaGAGTGAGCCCAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLGGGG*SEPRSR
Trigger: GCGCGATCTGGGCTCACTGCAACCTCCACCTCCCAG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCCCCCGCTGGGCAGCTaGGACTTTAGGTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFPPLGS*DFRCRF
Trigger: AAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGGTGGGAGAATCGCTTaGACCTGGGAGGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYGGRIA*TWEAEF
Trigger: AAACTCCGCCTCCCAGGTTCAAGCGATTCTCCCACC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTTTGGGAGGCTGAGGTaGGTGGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYFGRLR*VDHEVR
Trigger: CCTGACCTCGTGATCCACTCACCTCAGCCTCCCAAA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAGATGCGGCCTTCCCTaGGGACTTGGCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYRCGLP*GLGWGF
Trigger: AAAACCCCAGCCAAGTCCCCAGGGAAGGCCGCATCT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATCCGCGTGGATCAGCTaGGCTCCTACTATAAGTGGG +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVESAWIS*APTISG
Trigger: CCCACTTATAGTAGGAGCTCAGCTGATCCACGCGGA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGCTGGAAGGTGCCACTaGACCCTTTCCCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYAGRCH*TLSQRS
Trigger: AGATCTCTGGGAAAGGGTTCAGTGGCACCTTCCAGC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTTGGGAGGCTGAGGTaGGTGGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFFGRLR*VDHEVR
Trigger: CCTGACCTCGTGATCCACTCACCTCAGCCTCCCAAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCCCCTTTGGCTGCTCTaGCTCACTCGAAGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFPLWLL*LTRSSR
Trigger: CCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGGTTCCCCCTTTGGCTaGTCTGCCTCACTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYGSPFG*SASLEV
Trigger: TACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACTGGCCCCTCTCTACTaGTCTCTGCAGAGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVELAPLY*SLQSVL
Trigger: AAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCTGGCCCCTCTCTACTaGTCTCTGCAGAGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYLAPLY*SLQSVL
Trigger: AAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGGTTTGGACCCTCTCTaGTTCACAGATGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYGLDPL*FTDAAF
Trigger: GAAGGCCGCATCTGTGAAGCAGAGAGGGTCCAAACC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCTGGGAGGCGGAGTTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYLGGGV*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAAACTCCGCCTCCCAG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATCGGTGTTTGTTTCTaGGCCCTGGCTAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYIGVCF*ALASWL
Trigger: CAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGAT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAGATGCGGCCTTCCCTaGGGACTTGGCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFRCGLP*GLGWGF
Trigger: AAAACCCCAGCCAAGTCCCCAGGGAAGGCCGCATCT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACTAGCTTTCCCCCGCTaGGCAGCTGAGACTTTAGGT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVELAFPR*AAETLG
Trigger: ACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGCGTTCTTCAACAGCTaGGGCCTGATGTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYAFFNS*GLMSTL
Trigger: TAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCTTGATGACTGTGGATaGGGGTCTGGTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYLDDCG*GSGLLG
Trigger: GCCAAGAAGACCAGACCCTCATCCACAGTCATCAAG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACTTGATGACTGTGGATaGGGGTCTGGTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVELDDCG*GSGLLG
Trigger: GCCAAGAAGACCAGACCCTCATCCACAGTCATCAAG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGGTTGCAGGCTTCTTTaGGGAGCCACCACTAGGTTT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYGCRLL*GATTRF
Trigger: AAACCTAGTGGTGGCTCCTCAAAGAAGCCTGCAACC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGGTTGCAGGCTTCTTTaGGGAGCCACCACTAGGTTT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEGCRLL*GATTRF
Trigger: AAACCTAGTGGTGGCTCCTCAAAGAAGCCTGCAACC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAGCAGGAGAATTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYSRRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAGGATTTTGGGAGGCTaGGGTGAGTGGATCACGAGG +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFRILGG*GEWITR
Trigger: CCTCGTGATCCACTCACCTCAGCCTCCCAAAATCCT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGGGCTACTTGGGAGGCTaGGGTGGGGAGAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKGYLGG*GGENCL
Trigger: CAAGCAGTTCTCCCCACCTCAGCCTCCCAAGTAGCC...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTTTGTTTCTGGGCCCTaGCTAGCTGGCTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYFVSGP*LAGWQK
Trigger: TTTCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATTTGTTTCTGGGCCCTaGCTAGCTGGCTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEFVSGP*LAGWQK
Trigger: TTTCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCATCGGTGTTTGTTTCTaGGCCCTGGCTAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFIGVCF*ALASWL
Trigger: CAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGAT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAATCCATCTTGGGACGTaGGGAAGAAGCCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEIHLGT*GRSHRC
Trigger: ACACCGATGGCTTCTTCCCCACGTCCCAAGATGGAT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATCCATCTTGGGACGTaGGGAAGAAGCCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYIHLGT*GRSHRC
Trigger: ACACCGATGGCTTCTTCCCCACGTCCCAAGATGGAT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCTAGCTTTCCCCCGCTaGGCAGCTGAGACTTTAGGT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLAFPR*AAETLG
Trigger: ACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGTAACCCCAGGATTTTaGGAGGCTGAGGTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYVTPGF*EAEVSG
Trigger: TCCACTCACCTCAGCCTCCCAAAATCCTGGGGTTAC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGTAACCCCAGGATTTTaGGAGGCTGAGGTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEVTPGF*EAEVSG
Trigger: TCCACTCACCTCAGCCTCCCAAAATCCTGGGGTTAC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTGGACGAGTTCACCTTaGGACGTATCAGTCGCCATT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYWTSSP*DVSVAI
Trigger: AATGGCGACTGATACGTCTCAAGGTGAACTCGTCCA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATGGACGAGTTCACCTTaGGACGTATCAGTCGCCATT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEWTSSP*DVSVAI
Trigger: AATGGCGACTGATACGTCTCAAGGTGAACTCGTCCA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCGCGTTCTTCAACAGCTaGGGCCTGATGTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFAFFNS*GLMSTL
Trigger: TAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGC...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACAGGGGTTTCTCCCCTaGTTTCTTCAGCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEQGFLP*FLQLEC
Trigger: ACATTCCAGCTGAAGAAATCAGGGGAGAAACCCCTG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCTTGATGACTGTGGATaGGGGTCTGGTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLDDCG*GSGLLG
Trigger: GCCAAGAAGACCAGACCCTCATCCACAGTCATCAAG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTGGCTCTGCAGAAGTaGGTGACCATCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLALQK*VTICST
Trigger: GGTGGAACAGATGGTCACTCACTTCTGCAGAGCCAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCTCTCTACTGCTCTCTaGAGAGCGTTCTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYLSTAL*RAFFNS
Trigger: GCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGCTGGGGTTTTCTTCTaGAACCTTCTCTTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYAGVFF*NLLLGG
Trigger: GCCACCTAAGAGAAGGTTGCAGAAGAAAACCCCAGC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGCTGGGGTTTTCTTCTaGAACCTTCTCTTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEAGVFF*NLLLGG
Trigger: GCCACCTAAGAGAAGGTTGCAGAAGAAAACCCCAGC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATTTGGCCTTAGGAGGTaGTTTCTTAGGCAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEFGLRR*FLRQGP
Trigger: AGGCCCTTGCCTAAGAAAGCACCTCCTAAGGCCAAA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTTTGGCCTTAGGAGGTaGTTTCTTAGGCAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYFGLRR*FLRQGP
Trigger: AGGCCCTTGCCTAAGAAAGCACCTCCTAAGGCCAAA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCATCACACCACTGCGCTaGAGCCTTAGTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFITPLR*SLSDTA
Trigger: TGCTGTGTCACTAAGGCTGCAGCGCAGTGGTGTGAT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTTGTTTCTGGGCCCTaGCTAGCTGGCTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFFVSGP*LAGWQK
Trigger: TTTCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAGATTGCATCCATCTTaGGACGTGGGGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYRLHPS*DVGKKP
Trigger: TGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAGATTGCATCCATCTTaGGACGTGGGGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVERLHPS*DVGKKP
Trigger: TGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGATGCACCACTCTTCTaGAAGCATGCCTTAATGGCC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYDAPLF*KHALMA
Trigger: GGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGCGAGTAAAGGCCAGTaGGAGGACATCCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEASKGQ*EDILQF
Trigger: AAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACCTGATTTCTTCAGCTaGAATGTCCCCGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEPDFFS*NVPEAP
Trigger: AGGTGCTTCGGGGACATTCCAGCTGAAGAAATCAGG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCTGTGGATGAGGGTCTaGTCTTCTTGGCAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLWMRV*SSWQAF
Trigger: AAACGCCTGCCAAGAAGACCAGACCCTCATCCACAG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAAGACTTCTTCATGGTaGATTTGCCCTTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYKTSSW*ICPCPA
Trigger: TGCCGGGCAAGGGCAAATCCACCATGAAGAAGTCTT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCTTCCAGGACCTGACTaGCATACCGTTCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYLPGPD*HTVLDA
Trigger: AGCATCAAGAACGGTATGCCAGTCAGGTCCTGGAAG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAACATCTTTTGCCTCTaGCAGTACTCAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVENIFCL*QYSRGQ
Trigger: CTGGCCCCTTGAGTACTGCCAGAGGCAAAAGATGTT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAACATCTTTTGCCTCTaGCAGTACTCAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYNIFCL*QYSRGQ
Trigger: CTGGCCCCTTGAGTACTGCCAGAGGCAAAAGATGTT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGGAGACAGATTCCTCTaGACTTATGTCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEGDRFL*TYVWFW
Trigger: CCAGAACCAGACATAAGTTCAGAGGAATCTGTCTCC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTCGAATAGCAACCACTaGTGCACCACTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYSNSNH*CTTLLE
Trigger: TTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATCGAATAGCAACCACTaGTGCACCACTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVESNSNH*CTTLLE
Trigger: TTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCAGGGGTTTCTCCCCTaGTTTCTTCAGCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFQGFLP*FLQLEC
Trigger: ACATTCCAGCTGAAGAAATCAGGGGAGAAACCCCTG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATATTACAGCTATAACTaGAGTCTCCAGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEYYSYN*SLQAGG
Trigger: GCCTCCTGCCTGGAGACTTCAGTTATAGCTGTAATA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTATTACAGCTATAACTaGAGTCTCCAGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYYYSYN*SLQAGG
Trigger: GCCTCCTGCCTGGAGACTTCAGTTATAGCTGTAATA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGACGAATCGGCATGGTaGTATCTTCTACCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEDESAW*YLLPSH
Trigger: GTGAGAAGGTAGAAGATAGCACCATGCCGATTCGTC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTTGGCCTTAGGAGGTaGTTTCTTAGGCAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFFGLRR*FLRQGP
Trigger: AGGCCCTTGCCTAAGAAAGCACCTCCTAAGGCCAAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATGGTGGATTTGCCCTTaGCCGGCAATTTTACTTCCT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEWWICP*PAILLP
Trigger: AGGAAGTAAAATTGCCGGGCAAGGGCAAATCCACCA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAGCTCCTACTATAAGTaGGAGTGCCTTAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVESSYYK*ECLRMD
Trigger: GTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAGATTGCATCCATCTTaGGACGTGGGGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFRLHPS*DVGKKP
Trigger: TGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCGATGCACCACTCTTCTaGAAGCATGCCTTAATGGCC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFDAPLF*KHALMA
Trigger: GGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATC...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCGCGAGTAAAGGCCAGTaGGAGGACATCCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFASKGQ*EDILQF
Trigger: AAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGC...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCCTGATTTCTTCAGCTaGAATGTCCCCGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFPDFFS*NVPEAP
Trigger: AGGTGCTTCGGGGACATTCCAGCTGAAGAAATCAGG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACTTCCTTTCTTGCACTaGTTGCAGGCTTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVELPFLH*LQASLR
Trigger: CCTCAAAGAAGCCTGCAACCAGTGCAAGAAAGGAAG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAAGACTTCTTCATGGTaGATTTGCCCTTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFKTSSW*ICPCPA
Trigger: TGCCGGGCAAGGGCAAATCCACCATGAAGAAGTCTT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAACATCTTTTGCCTCTaGCAGTACTCAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFNIFCL*QYSRGQ
Trigger: CTGGCCCCTTGAGTACTGCCAGAGGCAAAAGATGTT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAGTTGTGGATGTTCGTaGAAGAGTGCGATGACCTTC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYSCGCS*KSAMTF
Trigger: GAAGGTCATCGCACTCTTCCACGAACATCCACAACT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGGTAGTCCTGGCTACTTaGGAGGCTGAGGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMVVLAT*EAEVGR
Trigger: TCTCCCCACCTCAGCCTCCCAAGTAGCCAGGACTAC...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGTCCGCGTGGATCAGCTaGGCTCCTACTATAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMSAWIS*APTISG
Trigger: CCCACTTATAGTAGGAGCTCAGCTGATCCACGCGGA...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGAATTGGTTCCTGGGTaGTTCTCTAGGACATACTTC +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEELVPG*FSRTYF
Trigger: GAAGTATGTCCTAGAGAATCACCCAGGAACCAATTC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGAATTGGTTCCTGGGTaGTTCTCTAGGACATACTTC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYELVPG*FSRTYF
Trigger: GAAGTATGTCCTAGAGAATCACCCAGGAACCAATTC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGGCTGGAAGGTGCCACTaGACCCTTTCCCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMAGRCH*TLSQRS
Trigger: AGATCTCTGGGAAAGGGTTCAGTGGCACCTTCCAGC...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGAGCAGGAGAATTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKSRRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAACAAGGTCAAAAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVETRSKD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTTTTGACCTTGT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR TCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGCGTGGAAGAGTGCGATaGCCTTCCTGTCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKRGRVR*PSCLFP
Trigger: AGGGAAAAGACAGGAAGGTCATCGCACTCTTCCACG...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTACTATAAGTGGGAGTaGCTTAGGATGGACGAGTTC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYYYKWE*LRMDEF
Trigger: GAACTCGTCCATCCTAAGGCACTCCCACTTATAGTA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATGGTTCTGGATCCACTaGAGAGCTCCTATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEWFWIH*RAPILS
Trigger: AGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTGGTTCTGGATCCACTaGAGAGCTCCTATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYWFWIH*RAPILS
Trigger: AGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGCTGGCCCCTCTCTACTaGTCTCTGCAGAGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMLAPLY*SLQSVL
Trigger: AAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAG...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTCCCCGAAGCACCTTTaGCAGTTATCTGTTCTAACT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYSPKHL*QLSVLT
Trigger: AGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATCCCCGAAGCACCTTTaGCAGTTATCTGTTCTAACT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVESPKHL*QLSVLT
Trigger: AGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGGGTTTGGACCCTCTCTaGTTCACAGATGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMGLDPL*FTDAAF
Trigger: GAAGGCCGCATCTGTGAAGCAGAGAGGGTCCAAACC...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATCTTCATGGTGGATTTaGCCTTGCCCGGCAATTTTA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVESSWWI*PCPAIL
Trigger: TAAAATTGCCGGGCAAGGGCAAATCCACCATGAAGA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAATGTTCGTGGAAGAGTaGGATGACCTTCCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEMFVEE*DDLPVF
Trigger: AAAGACAGGAAGGTCATCGCACTCTTCCACGAACAT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCACACGAGTTCAAAGCTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFTRVQS*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAGCTTTGAACTCGTGT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATTCGACGAATCGGCATaGTGCTATCTTCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEFDESA*CYLLPS
Trigger: AGAAGGTAGAAGATAGCACCATGCCGATTCGTCGAA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAACAGAACTCCTGGGCTaGGATAATAGGGAAAACAGA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVETELLG*DNRENR
Trigger: TCTGTTTTCCCTATTATCCCAGCCCAGGAGTTCTGT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGCTGTGGATGAGGGTCTaGTCTTCTTGGCAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKLWMRV*SSWQAF
Trigger: AAACGCCTGCCAAGAAGACCAGACCCTCATCCACAG...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCTTCCTTTCTTGCACTaGTTGCAGGCTTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLPFLH*LQASLR
Trigger: CCTCAAAGAAGCCTGCAACCAGTGCAAGAAAGGAAG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAATGATCAAGAAGATTTaGGCCGTGAGTGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEMIKKI*AVSGSS
Trigger: TGAGCTACCACTCACGGCCCAAATCTTCTTGATCAT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTTCTGGGATTACCTCTaGGGTTTGTTGTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYFWDYL*GLLFPF
Trigger: AAAGGGGAACAACAAACCCCAGAGGTAATCCCAGAA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGGCGTTCTTCAACAGCTaGGGCCTGATGTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMAFFNS*GLMSTL
Trigger: TAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGC...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGGGTTGCAGGCTTCTTTaGGGAGCCACCACTAGGTTT +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMGCRLL*GATTRF
Trigger: AAACCTAGTGGTGGCTCCTCAAAGAAGCCTGCAACC...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAGGAAGCCACTTGCTTaGTATCAAAAGTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFRKPLA*YQKCCG
Trigger: TCCACAGCACTTTTGATATCAAGCAAGTGGCTTCCT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAGAAAAGACTTAAAGTaGGGGCGACACTTAGCTACT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVERKDLK*GRHLAT
Trigger: AGTAGCTAAGTGTCGCCCTCACTTTAAGTCTTTTCT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAGGTGGGAAGATCACGTaGGGCCACGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGGGKIT*GHEFKT
Trigger: GGTCTTGAACTCGTGGCCTCACGTGATCTTCCCACC...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTACTATAAGTGGGAGTaGCTTAGGATGGACGAGTTC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFYYKWE*LRMDEF
Trigger: GAACTCGTCCATCCTAAGGCACTCCCACTTATAGTA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR GCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGCTCTCTACTGCTCTCTaGAGAGCGTTCTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKLSTAL*RAFFNS
Trigger: GCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAG...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAATGGCAGACAAGATTaGATATTCCATCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYNGRQD*IFHQAS
Trigger: GGAAGCCTGATGGAATATGCAATCTTGTCTGCCATT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTCTTCATGGTGGATTTaGCCTTGCCCGGCAATTTTA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFSSWWI*PCPAIL
Trigger: TAAAATTGCCGGGCAAGGGCAAATCCACCATGAAGA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGTCAGTGCTATATTGTaGCTCCATTTTACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYVSAIL*LHFTSR
Trigger: CCTGGAAGTAAAATGGAGGCACAATATAGCACTGAC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGAAACAAACATCTTTTaGCTCTGGCAGTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYETNIF*LWQYSR
Trigger: CCTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACCCACACACGATAGTTaGTATAAATTCCACAGACCT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEPTHDS*YKFHRP
Trigger: AGGTCTGTGGAATTTATAGCAACTATCGTGTGTGGG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR GCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGCAGCCTGTGCTTAAGTaGCTGGTGTGCAATACAGCC +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMQPVLK*LVCNTA
Trigger: GGCTGTATTGCACACCAGGCACTTAAGCACAGGCTG...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTCTGCTCCTTTGGAATaGCTGGAAGGGAAAAATCAA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYSAPLE*LEGKNQ
Trigger: TTGATTTTTCCCTTCCAGGCATTCCAAAGGAGCAGA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTCGACGAATCGGCATaGTGCTATCTTCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFFDESA*CYLLPS
Trigger: AGAAGGTAGAAGATAGCACCATGCCGATTCGTCGAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCACTTATGTCTGGTTCTaGCTTTTCTTCCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFTYVWF*LFFLPF
Trigger: GAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGATCCATCTTGGGACGTaGGGAAGAAGCCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMIHLGT*GRSHRC
Trigger: ACACCGATGGCTTCTTCCCCACGTCCCAAGATGGAT...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGGATGCACCACTCTTCTaGAAGCATGCCTTAATGGCC +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKDAPLF*KHALMA
Trigger: GGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATC...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTTTACTTGTGGTTCTaGATCCACTGCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFFYLWF*IHCRAP
Trigger: AGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCTCCAATTTTACTTGTaGTTCTGGATCCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYLQFYL*FWIHCR
Trigger: TCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCGTCAACCAGAACCTCTaGGGAAACAGTTTAATGGTC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFVNQNL*GNSLMV
Trigger: GACCATTAAACTGTTTCCCCAGAGGTTCTGGTTGAC...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGCAGGGGTTTCTCCCCTaGTTTCTTCAGCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMQGFLP*FLQLEC
Trigger: ACATTCCAGCTGAAGAAATCAGGGGAGAAACCCCTG...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGTATTACAGCTATAACTaGAGTCTCCAGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKYYSYN*SLQAGG
Trigger: GCCTCCTGCCTGGAGACTTCAGTTATAGCTGTAATA...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAAGGATTTTGGGAGGCTaGGGTGAGTGGATCACGAGG +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGRILGG*GEWITR
Trigger: CCTCGTGATCCACTCACCTCAGCCTCCCAAAATCCT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAAGGCAAACAAGAAGTaGCAACTCATGCTCCAAATA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEKANKK*QLMLQI
Trigger: TATTTGGAGCATGAGTTGTCACTTCTTGTTTGCCTT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGGACGAATCGGCATGGTaGTATCTTCTACCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKDESAW*YLLPSH
Trigger: GTGAGAAGGTAGAAGATAGCACCATGCCGATTCGTC...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAGGTTCCCCCTTTGGCTaGTCTGCCTCACTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGGSPFG*SASLEV
Trigger: TACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACC...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAATGGCAGACAAGATTaGATATTCCATCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFNGRQD*IFHQAS
Trigger: GGAAGCCTGATGGAATATGCAATCTTGTCTGCCATT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGTGGTGGATTTGCCCTTaGCCGGCAATTTTACTTCCT +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKWWICP*PAILLP
Trigger: AGGAAGTAAAATTGCCGGGCAAGGGCAAATCCACCA...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGACTGGGAGGCGGAGTTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGLGGGV*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAAACTCCGCCTCCCAG...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGAGCTCCTACTATAAGTaGGAGTGCCTTAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKSSYYK*ECLRMD
Trigger: GTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGGCGAGTAAAGGCCAGTaGGAGGACATCCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMASKGQ*EDILQF
Trigger: AAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGC...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAATCTCTAGAATCATCTaGCTCTTTCTTCGGAAACAG +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEISRII*LFLRKQ
Trigger: CTGTTTCCGAAGAAAGAGCCAGATGATTCTAGAGAT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATCTCTAGAATCATCTaGCTCTTTCTTCGGAAACAG +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYISRII*LFLRKQ
Trigger: CTGTTTCCGAAGAAAGAGCCAGATGATTCTAGAGAT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGCTTCCAGGACCTGACTaGCATACCGTTCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMLPGPD*HTVLDA
Trigger: AGCATCAAGAACGGTATGCCAGTCAGGTCCTGGAAG...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCTCTGTGTTTACAGTTaGAGAGAAAAGGTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYLCVYS*REKVSG
Trigger: TCCACTAACCTTTTCTCTCCAACTGTAAACACAGAG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGGGAATGCAATACTTTaGGCCAGTGAAAAATACCTA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYGNAIL*ASEKYL
Trigger: TAGGTATTTTTCACTGGCCCAAAGTATTGCATTCCC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGGTAATCCTGGCACTTTaGAAAGCCCAGGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMVILAL*KAQVGR
Trigger: TCTTCCCACCTGGGCTTTCCAAAGTGCCAGGATTAC...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGTCGAATAGCAACCACTaGTGCACCACTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMSNSNH*CTTLLE
Trigger: TTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGA...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACTGAGGTGTTTTTCTTaGTTTCTGAACCACAACAAA +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVELRCFS*FLNHNK
Trigger: TTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCAACACAAATTCCAATaGATTCATGATGGGATCACA +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYQHKFQ*IHDGIT
Trigger: TGTGATCCCATCATGAATTCATTGGAATTTGTGTTG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGGAAGAAACTTTAAATaGTCTAAACTTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYGRNFK*SKLLSL
Trigger: CAGGCTGAGAAGTTTAGATCATTTAAAGTTTCTTCC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTTTACTTCCTTTCTTaGACTGGTTGCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFFYFLS*TGCRLL
Trigger: AAGAAGCCTGCAACCAGTGCAAGAAAGGAAGTAAAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTTACAACTCAGTCAGTaGTATATTGTGCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYLQLSQ*YIVPPF
Trigger: AAATGGAGGCACAATATAGCACTGACTGAGTTGTAA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAAAAAGGAAGCCACTTaGTTGATATCAAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TAITEVSRQEALQLSQCYKKEAT*LISKVL
Trigger: CAGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATATTTTTCTCTTAGCTaGAGGAGAAAGGAGTCACAT +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEYFSLS*RRKESH
Trigger: ATGTGACTCCTTTCTCCTGCAGCTAAGAGAAAAATA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR GCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGAAACTTCTCAGCCTGTaGTTAAGTGCCTGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMKLLSL*LSAWCA
Trigger: TGCACACCAGGCACTTAAGCACAGGCTGAGAAGTTT...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCATTCATGGCAGCAATaGCAGACAAGATTGCATATT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFHSWQQ*QTRLHI
Trigger: AATATGCAATCTTGTCTGCCATTGCTGCCATGAATG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCTCTGTGTTTACAGTTaGAGAGAAAAGGTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLCVYS*REKVSG
Trigger: TCCACTAACCTTTTCTCTCCAACTGTAAACACAGAG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCGGGAATGCAATACTTTaGGCCAGTGAAAAATACCTA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFGNAIL*ASEKYL
Trigger: TAGGTATTTTTCACTGGCCCAAAGTATTGCATTCCC...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGTGTGTTCTGCTCCTTTaGAATGCCTGGAAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKCVLLL*NAWKGK
Trigger: TTTTCCCTTCCAGGCATTCCAAAGGAGCAGAACACA...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR CAA 72 bp AGAGTTGTAATTTTTGAGGAAAATCGCTTCAGCCTTTaGAGGCCTCCTTTGACATACCAGTGGTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: RVVIFEENRFSL*RPPLTYQWLTR
Trigger: TCTTGTCAACCACTGGTATGTCAAAGGAGGCCTCAAAAGGCTGAAGCGATTTTCCTCAAAAATTACAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCAACACAAATTCCAATaGATTCATGATGGGATCACA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFQHKFQ*IHDGIT
Trigger: TGTGATCCCATCATGAATTCATTGGAATTTGTGTTG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAAATCTCCCAACTTTTaGTTCCAGAAGAGTACAGAA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFKSPNF*FQKSTE
Trigger: TTCTGTACTCTTCTGGAATCAAAAGTTGGGAGATTT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTGGTTAGCAAACCTTaGCAAGGGCTAACAAAATTT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLVSKP*QGLTKF
Trigger: AAATTTTGTTAGCCCTTGTCAAGGTTTGCTAACCAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAGCTGGGGTTTTCTTCTaGAACCTTCTCTTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGAGVFF*NLLLGG
Trigger: GCCACCTAAGAGAAGGTTGCAGAAGAAAACCCCAGC...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGTCTTCATGGTGGATTTaGCCTTGCCCGGCAATTTTA +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMSSWWI*PCPAIL
Trigger: TAAAATTGCCGGGCAAGGGCAAATCCACCATGAAGA...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGGTCAGTGCTATATTGTaGCTCCATTTTACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKVSAIL*LHFTSR
Trigger: CCTGGAAGTAAAATGGAGGCACAATATAGCACTGAC...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTACAACTCAGTCAGTaGTATATTGTGCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLQLSQ*YIVPPF
Trigger: AAATGGAGGCACAATATAGCACTGACTGAGTTGTAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAAAAAGGAAGCCACTTaGTTGATATCAAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFKKEAT*LISKVL
Trigger: CAGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR GCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGGAAACAAACATCTTTTaGCTCTGGCAGTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKETNIF*LWQYSR
Trigger: CCTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTC...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATGTGCACCTAATAGGTaGATTAGAACATTTAACAAC +
Preference number: 4 (lower is better)
Translates to: ISQPYFRLQKGSQETKVECAPNR*IRTFNN
Trigger: GTTGTTAAATGTTCTAATGCACCTATTAGGTGCACA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR GCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGAAACTTCAACAGTTCTaGTTCCTTGGCTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKKLQQF*FLGFGS
Trigger: AGAGCCAAAGCCAAGGAAGCAGAACTGTTGAAGTTT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGCTCCAATTTTACTTGTaGTTCTGGATCCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKLQFYL*FWIHCR
Trigger: TCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAG...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGACCTGATTTCTTCAGCTaGAATGTCCCCGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGPDFFS*NVPEAP
Trigger: AGGTGCTTCGGGGACATTCCAGCTGAAGAAATCAGG...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAAAGACTTCTTCATGGTaGATTTGCCCTTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGKTSSW*ICPCPA
Trigger: TGCCGGGCAAGGGCAAATCCACCATGAAGAAGTCTT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCACAAACCTACAGTGCTaGCAGTCATACAAAAATATA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFTNLQC*QSYKNI
Trigger: TATATTTTTGTATGACTGGCAGCACTGTAGGTTTGT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTAATTAAGTCCATGTaGATGCATAGTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLIKSM*MHSQNP
Trigger: TGGATTCTGACTATGCATCCACATGGACTTAATTAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGCTGAGGTGTTTTTCTTaGTTTCTGAACCACAACAAA +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKLRCFS*FLNHNK
Trigger: TTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAG...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGAAGAGTTGTAATTTTTaGGGAAAATCGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VKKPTISLPALSETHLSKKSCNF*GKSLQP
Trigger: AGGCTGAAGCGATTTTCCTCAAAAATTACAACTCTT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGTTTTACTTCCTTTCTTaGACTGGTTGCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMFYFLS*TGCRLL
Trigger: AAGAAGCCTGCAACCAGTGCAAGAAAGGAAGTAAAA...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGACATGCTAGAGATTTCTaGGATTACCTCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGHARDF*DYLWGL
Trigger: CAAACCCCAGAGGTAATCCCAGAAATCTCTAGCATG...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR CAA 72 bp CCATTTTACTTCCAGGACCTGACTGGCATACCGTTCTaGATGCTTTCTACAAATATAAAAATCTCTGCAACT +
Preference number: 4 (lower is better)
Translates to: PFYFQDLTGIPF*MLSTNIKISAT
Trigger: AGTTGCAGAGATTTTTATATTTGTAGAAAGCATCAAGAACGGTATGCCAGTCAGGTCCTGGAAGTAAAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR TCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGCATGATTGTACTCTATaGTCTTGGAAGCAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMHDCTL*SWKQSL
Trigger: TAAAGACTGCTTCCAAGATCATAGAGTACAATCATG...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAAAGAGTACAGAATTCTaGGCACAGGTACCTAACATC +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGKSTEF*AQVPNI
Trigger: GATGTTAGGTACCTGTGCTCAGAATTCTGTACTCTT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGAAAAAGGAAGCCACTTaGTTGATATCAAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMKKEAT*LISKVL
Trigger: CAGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTT...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR TCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAAATACAGCCACCAGGTaGTTATTCAGTAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGNTATR*LFSKSL
Trigger: AAGAGACTTACTGAATAATCACCTGGTGGCTGTATT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAGATATAGAGAACTTGTaGTTGCTGTTAAGGGAATGC +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGDIENL*LLLREC
Trigger: GCATTCCCTTAACAGCAAGCACAAGTTCTCTATATC...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGATTAAGTCCATGTGGATaGATAGTCAGAATCCATGTG +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGLSPCG*IVRIHV
Trigger: CACATGGATTCTGACTATGCATCCACATGGACTTAA...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR GCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAATTATAAATGTGTTCTaGTCCTTTGGAATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGIINVF*SFGMPG
Trigger: TCCAGGCATTCCAAAGGAGCAGAACACATTTATAAT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAAGCATTCAATGTATCTaGAAACATCGTTTACCCTCT +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGSIQCI*KHRLPS
Trigger: AGAGGGTAAACGATGTTTCCAGATACATTGAATGCT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CCA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGACAAATCTTTGTCAAGTaGTTCCTAAGCCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGQIFVK*FLSQNF
Trigger: GAAGTTTTGGCTTAGGAACCACTTGACAAAGATTTG...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
3UTR CAA 72 bp CAGGTACCTAACATCCATACTATTAAGAATCATTACTaGCTAGAGAGCACAGGAGTAATTACTACAATTACT +
Preference number: 4 (lower is better)
Translates to: QVPNIHTIKNHY*LESTGVITTIT
Trigger: AGTAATTGTAGTAATTACTCCTGTGCTCTCTAGCAAGTAATGATTCTTAATAGTATGGATGTTAGGTACCTG
35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS CCA 90 bp CGACCTACCGAGGCACCGCTCTCATTCAAACCCCACCGCCTAAGGTaGCGAGTAACCAGTTCTACGTTTCCCACCGGGGGAGCGAGACTC +
Preference number: 5 (lower is better)
Translates to: RPTEAPLSFKPHRLR*RVTSSTFPTGGARL
Trigger: GAGTCTCGCTCCCCCGGTGGGAAACGTAGAACTGGTTACTCGCCACCTTAGGCGGTGGGGTTTGAATGAGAGCGGTGCCTCGGTAGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443615.1
CDS CCA 90 bp GCATCCATCTTGGGACGTGGGGAAGAAGCCATCGGTGTTTGTTTCTaGGCCCTGGCTAGCTGGCTGGCAGAAAGGGTAGCCCAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: ASILGRGEEAIGVCF*ALASWLAERVAQEG
Trigger: TCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000419948.5
ENST00000424732.5
ENST00000438032.6
CDS CCA 90 bp GAATCAACCGAGGCACCGCTCTCATTCAAACCCCACCGCCTAAGGTaGCGAGTAACCAGTTCTACGTTTCCCACCGGGGGAGCGAGACTC +
Preference number: 5 (lower is better)
Translates to: ESTEAPLSFKPHRLR*RVTSSTFPTGGARL
Trigger: GAGTCTCGCTCCCCCGGTGGGAAACGTAGAACTGGTTACTCGCCACCTTAGGCGGTGGGGTTTGAATGAGAGCGGTGCCTCGGTTGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414993.1
CDS CCA 90 bp TCTACCTTCGAGGCACCGCTCTCATTCAAACCCCACCGCCTAAGGTaGCGAGTAACCAGTTCTACGTTTCCCACCGGGGGAGCGAGACTC +
Preference number: 5 (lower is better)
Translates to: STFEAPLSFKPHRLR*RVTSSTFPTGGARL
Trigger: GAGTCTCGCTCCCCCGGTGGGAAACGTAGAACTGGTTACTCGCCACCTTAGGCGGTGGGGTTTGAATGAGAGCGGTGCCTCGAAGGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419490.5
CDS CCA 90 bp GCCTTAGGAGGTGCTTTCTTAGGCAAGGGCCTAGCTTTCCCCCGCTaGGCAGCTGAGACTTTAGGTGCAGGTTTGGACCCTCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ALGGAFLGKGLAFPR*AAETLGAGLDPLCF
Trigger: GAAGCAGAGAGGGTCCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAGGCCCTTGCCTAAGAAAGCACCTCCTAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS TCA 90 bp AGGTGCTTTCTTAGGCAAGGGCCTAGCTTTCCCCCGCTGGGCAGCTaGGACTTTAGGTGCAGGTTTGGACCCTCTCTGCTTCACAGATGC +
Preference number: 5 (lower is better)
Translates to: RCFLRQGPSFPPLGS*DFRCRFGPSLLHRC
Trigger: GCATCTGTGAAGCAGAGAGGGTCCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAGGCCCTTGCCTAAGAAAGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS CCA 90 bp AGGTGCAGGTTTGGACCCTCTCTGCTTCACAGATGCGGCCTTCCCTaGGGACTTGGCTGGGGTTTTCTTCTGCAACCTTCTCTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: RCRFGPSLLHRCGLP*GLGWGFLLQPSLRW
Trigger: CCACCTAAGAGAAGGTTGCAGAAGAAAACCCCAGCCAAGTCCCCAGGGAAGGCCGCATCTGTGAAGCAGAGAGGGTCCAAACCTGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS TCA 90 bp TGCCTCCATCTCTTACAAACGCTCAGATGGGCGACTGTAACTTTCTaGCGACCTACCGAGGCACCGCTCTCATTCAAACCCCACCGCCTA +
Preference number: 5 (lower is better)
Translates to: CLHLLQTLRWATVTF*RPTEAPLSFKPHRL
Trigger: TAGGCGGTGGGGTTTGAATGAGAGCGGTGCCTCGGTAGGTCGTCAGAAAGTTACAGTCGCCCATCTGAGCGTTTGTAAGAGATGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443615.1
CDS TCA 90 bp GTGCTATCTTCTACCTTCTCACCTAACTTGTCCGCGTGGATCAGCTaGGCTCCTACTATAAGTGGGAGTGCCTTAGGATGGACGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VLSSTFSPNLSAWIS*APTISGSALGWTSS
Trigger: TGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGATCCACGCGGACAAGTTAGGTGAGAAGGTAGAAGATAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312239.10
ENST00000375000.5
ENST00000414993.1
ENST00000417710.5
ENST00000438032.6
ENST00000487117.1
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGAGGGTCTGGTCTTCTaGGCAGGCGTTTTGGCCTTA +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEEGLVF*AGVLAL
Trigger: TAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGGTGGGGAGAACTGCTaGAGCACACGAGTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEGGENC*STRVQS
Trigger: GCTTTGAACTCGTGTGCTCAAGCAGTTCTCCCCACC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS GCA 90 bp CATCAAGACAACACTCTCCCAAAGCAGGTCAAGACAAGACTCCTCTaGACCAGGTGGGTCGGAGTTCCTGCATTAGCACAGATATGTTTT +
Preference number: 5 (lower is better)
Translates to: HQDNTLPKQVKTRLL*TRWVGVPALAQICF
Trigger: AAAACATATCTGTGCTAATGCAGGAACTCCGACCCACCTGGTGCAGAGGAGTCTTGTCTTGACCTGCTTTGGGAGAGTGTTGTCTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491748.1
CDS CCA 90 bp AAGGCGAGTAAAGGCCAGTGGGAGGACATCCTCCAATTTTACTTGTaGTTCTGGATCCACTGCAGAGCTCCTATTCTGTTTGATGACTCC +
Preference number: 5 (lower is better)
Translates to: KASKGQWEDILQFYL*FWIHCRAPILFDDS
Trigger: GGAGTCATCAAACAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419948.5
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAAAGATTGCATCCATCTaGGGACGTGGGGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEKIASI*GRGEEA
Trigger: GGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATTCTTGGCAGGCGTTTaGGCCTTAGGAGGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEFLAGV*ALGGAF
Trigger: GAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTTCTTGGCAGGCGTTTaGGCCTTAGGAGGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYFLAGV*ALGGAF
Trigger: GAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCGAGGGTCTGGTCTTCTaGGCAGGCGTTTTGGCCTTA +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFEGLVF*AGVLAL
Trigger: TAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTC...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCCTTTCTTGCACTGGTaGCAGGCTTCTTTGAGGAGC +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYPFLHW*QASLRS
Trigger: GCTCCTCAAAGAAGCCTGCAACCAGTGCAAGAAAGG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCAGCTACTTGGCAGGTaGAGGCAGGAGAATCGCTTG +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFQLLGR*RQENRL
Trigger: CAAGCGATTCTCCTGCCTCAACCTGCCAAGTAGCTG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS CCA 90 bp AAGGCGAGTAAAGGCCAGTGGGAGGACATCCTCCAATTTTACTTGTaGTTCTGGATCCACTGCAGAGCTCCTATTCTTTCTGTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: KASKGQWEDILQFYL*FWIHCRAPILSVSG
Trigger: TCCAGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000424732.5
ENST00000438032.6
CDS CCA 90 bp ACTGTAGGAAGCTTCTTTAGGTTCACAAAGGCGAGTAAAGGCCAGTaGGAGGACATCCTCCAATTTTACTTGTGGTTCTGGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: TVGSFFRFTKASKGQ*EDILQFYLWFWIHC
Trigger: GCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCTTCCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000419948.5
ENST00000424732.5
ENST00000438032.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAATGGACGAGTTCACCTaGAGACGTATCAGTCGCCAT +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEMDEFT*RRISRH
Trigger: ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCAT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTCAGCAAGCTTGCTTTaGGGAGGAGTTTCCCGGGTA +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFSASLL*GGVSRV
Trigger: TACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCTGA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTCCCCTTCAGCAAGCTaGCTTTTGGGAGGAGTTTCC +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFSPSAS*LLGGVS
Trigger: GGAAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAAGATTGCATCCATCTaGGGACGTGGGGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFKIASI*GRGEEA
Trigger: GGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTGGCCTCAGTTAAGATaGCATCCATCTTGGGACGTG +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYWPQLR*HPSWDV
Trigger: CACGTCCCAAGATGGATGCAATCTTAACTGAGGCCA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAGTCCCCGAAGCACCTTaGCCAGTTATCTGTTCTAAC +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEVPEAP*PVICSN
Trigger: GTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGAC...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTCTTGGCAGGCGTTTaGGCCTTAGGAGGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFFLAGV*ALGGAF
Trigger: GAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATCCACCACTAGGTTTCTaGATGACTGTGGATGAGGGT +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYPPLGF*MTVDEG
Trigger: ACCCTCATCCACAGTCATCAAGAAACCTAGTGGTGG...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACCACCACTAGGTTTCTaGATGACTGTGGATGAGGGT +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEPPLGF*MTVDEG
Trigger: ACCCTCATCCACAGTCATCAAGAAACCTAGTGGTGG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCCTTTCTTGCACTGGTaGCAGGCTTCTTTGAGGAGC +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFPFLHW*QASLRS
Trigger: GCTCCTCAAAGAAGCCTGCAACCAGTGCAAGAAAGG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATGGTGGATTTGCCCTaGCCCGGCAATTTTACTTCC +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYMVDLP*PGNFTS
Trigger: GGAAGTAAAATTGCCGGGCAAGGGCAAATCCACCAT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTGGCCTCAGTTAAGATaGCATCCATCTTGGGACGTG +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFWPQLR*HPSWDV
Trigger: CACGTCCCAAGATGGATGCAATCTTAACTGAGGCCA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCCACCACTAGGTTTCTaGATGACTGTGGATGAGGGT +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFPPLGF*MTVDEG
Trigger: ACCCTCATCCACAGTCATCAAGAAACCTAGTGGTGG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTTCTTCATGGTGGATTaGCCCTTGCCCGGCAATTTT +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYFFMVD*PLPGNF
Trigger: AAAATTGCCGGGCAAGGGCAAATCCACCATGAAGAA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATTCTTCATGGTGGATTaGCCCTTGCCCGGCAATTTT +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEFFMVD*PLPGNF
Trigger: AAAATTGCCGGGCAAGGGCAAATCCACCATGAAGAA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACACAAGGTCAAAAGATaGAGACCATCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEHKVKR*RPSWPT
Trigger: TGTTGGCCAGGATGGTCTCAATCTTTTGACCTTGTG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAATGTGTTCTGCTCCTTaGGAATGCCTGGAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEMCSAP*ECLEGK
Trigger: TTTCCCTTCCAGGCATTCCAAAGGAGCAGAACACAT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS CCA 90 bp AACACTCTCCCAAAGCAGGTCAAGACAAGACTCCTCTGCACCAGGTaGGTCGGAGTTCCTGCATTAGCACAGATATGTTTTACAATAAAT +
Preference number: 5 (lower is better)
Translates to: NTLPKQVKTRLLCTR*VGVPALAQICFTIN
Trigger: ATTTATTGTAAAACATATCTGTGCTAATGCAGGAACTCCGACCCACCTGGTGCAGAGGAGTCTTGTCTTGACCTGCTTTGGGAGAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491748.1
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAACAATGGCAGACAAGATaGCATATTCCATCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEQWQTR*HIPSGF
Trigger: GAAGCCTGATGGAATATGCAATCTTGTCTGCCATTG...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATGAGATCACCCTGTTTTaGGCTTATTCCCAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYEITLF*AYSQSC
Trigger: ACAGCTTTGGGAATAAGCCAAAAACAGGGTGATCTC...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCAAAAATATAGCATATaGGCTGGGCGCGGTGACTCA +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFQKYSI*AGRGDS
Trigger: TGAGTCACCGCGCCCAGCCAATATGCTATATTTTTG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTACCTCTGGGGTTTGTaGTTCCCCTTTCTGAACATG +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFYLWGL*FPFLNM
Trigger: CATGTTCAGAAAGGGGAACAACAAACCCCAGAGGTA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS TCA 90 bp GCTGTGGTAATATCACAGCGCAGCACGTTACTCACTTGTTTGTGGTaGCATTGGTGTAAACAAACCTACAGTGCTGCCAGTCATACAAAA +
Preference number: 5 (lower is better)
Translates to: AVVISQRSTLLTCLW*HWCKQTYSAASHTK
Trigger: TTTTGTATGACTGGCAGCACTGTAGGTTTGTTTACACCAATGTCACCACAAACAAGTGAGTAACGTGCTGCGCTGTGATATTACCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS-3UTR CAA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGATGGACGAGTTCACCTaGAGACGTATCAGTCGCCAT +
Preference number: 5 (lower is better)
Translates to: VKKPTISLPALSETHLSKMDEFT*RRISRH
Trigger: ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCAT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGTCAGCAAGCTTGCTTTaGGGAGGAGTTTCCCGGGTA +
Preference number: 5 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMSASLL*GGVSRV
Trigger: TACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCTGA...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTGGAGTTTCATTCTCTaGTTCTTCTACAGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYWSFIL*FFYSGD
Trigger: GTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCAATGGCAGACAAGATaGCATATTCCATCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFQWQTR*HIPSGF
Trigger: GAAGCCTGATGGAATATGCAATCTTGTCTGCCATTG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAAATTTTACTTCCTTTCTaGCACTGGTTGCAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEILLPF*HWLQAS
Trigger: AGAAGCCTGCAACCAGTGCAAGAAAGGAAGTAAAAT...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTCAGTCAGTGCTATATaGTGCCTCCATTTTACTTCC +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYSVSAI*CLHFTS
Trigger: GGAAGTAAAATGGAGGCACAATATAGCACTGACTGA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCGAGATCACCCTGTTTTaGGCTTATTCCCAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFEITLF*AYSQSC
Trigger: ACAGCTTTGGGAATAAGCCAAAAACAGGGTGATCTC...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ATTTCCCAGCCATACTTTAGGCTACAGAAGGGATCCCAGGAGACAAAAGTGGAATTCTCTTTTCAGTGCTaGTTTAAGGAGATAACCCCT +
Preference number: 5 (lower is better)
Translates to: ISQPYFRLQKGSQETKVEFSFQC*FKEITP
Trigger: AGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAA...TTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAGAGGGTCTGGTCTTCTaGGCAGGCGTTTTGGCCTTA +
Preference number: 5 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGEGLVF*AGVLAL
Trigger: TAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTC...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCATTTTACTTCCTTTCTaGCACTGGTTGCAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFILLPF*HWLQAS
Trigger: AGAAGCCTGCAACCAGTGCAAGAAAGGAAGTAAAAT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGATGGTGGATTTGCCCTaGCCCGGCAATTTTACTTCC +
Preference number: 5 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMMVDLP*PGNFTS
Trigger: GGAAGTAAAATTGCCGGGCAAGGGCAAATCCACCAT...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGTTCTTCATGGTGGATTaGCCCTTGCCCGGCAATTTT +
Preference number: 5 (lower is better)
Translates to: VKKPTISLPALSETHLSKFFMVD*PLPGNF
Trigger: AAAATTGCCGGGCAAGGGCAAATCCACCATGAAGAA...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATAGAGAACTTGTGCTaGCTGTTAAGGGAATGCAAT +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYIENLC*LLRECN
Trigger: ATTGCATTCCCTTAACAGCAAGCACAAGTTCTCTAT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATAGTGATATAGAGAACTaGTGCTTGCTGTTAAGGGAA +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYSDIEN*CLLLRE
Trigger: TTCCCTTAACAGCAAGCACAAGTTCTCTATATCACT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCAGAAACAAACATCTTTaGCCTCTGGCAGTACTCAAG +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFRNKHL*PLAVLK
Trigger: CTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTCT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS TCA 90 bp CCCTCCATCCACCCTAAAATAATAGCCAACCTAACCCAAAGATACTaGCAACTGTACCCAATAAGCAGGTTAACCAGTTATGTCCCTAAA +
Preference number: 5 (lower is better)
Translates to: PSIHPKIIANLTQRY*QLYPISRLTSYVPK
Trigger: TTTAGGGACATAACTGGTTAACCTGCTTATTGGGTACAGTTGTCAGTATCTTTGGGTTAGGTTGGCTATTATTTTAGGGTGGATGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491748.1
CDS TCA 90 bp AGCTTAGGGACTTTCTCTTCCCATTCAACAGGTATTCAATCTAACTaGGAAGTCCCAACCCTCCTATGGATATTTTCTCCTTCCATCTAC +
Preference number: 5 (lower is better)
Translates to: SLGTFSSHSTGIQSN*EVPTLLWIFSPSIY
Trigger: GTAGATGGAAGGAGAAAATATCCATAGGAGGGTTGGGACTTCTCAGTTAGATTGAATACCTGTTGAATGGGAAGAGAAAGTCCCTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491748.1
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTCTCTTTTCAGTGCTaGTTTAAGGAGATAACCCCT +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFFSFQC*FKEITP
Trigger: AGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCATAGAGAACTTGTGCTaGCTGTTAAGGGAATGCAAT +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFIENLC*LLRECN
Trigger: ATTGCATTCCCTTAACAGCAAGCACAAGTTCTCTAT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCCAAAAAGGAAGCCACTaGCTTGATATCAAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFQKGSH*LDIKSA
Trigger: AGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTTG...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATTTACAACAGGAAAGATaGCCTTACATGCAACACAAA +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYLQQER*PYMQHK
Trigger: TTTGTGTTGCATGTAAGGCAATCTTTCCTGTTGTAA...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp ACAGCTATAACTGAAGTCTCCAGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTAAGAATCATTACTaGCTAGAGAGCACAGGAGTA +
Preference number: 5 (lower is better)
Translates to: TAITEVSRQEALQLSQCYIKNHY*LESTGV
Trigger: TACTCCTGTGCTCTCTAGCAAGTAATGATTCTTAAT...ATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGGTAAGGCGTATGTCTTaGACAGTTGTGGATGTTCGT +
Preference number: 5 (lower is better)
Translates to: VKKPTISLPALSETHLSKVRRMS*TVVDVR
Trigger: ACGAACATCCACAACTGTCAAAGACATACGCCTTAC...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGATGTAATCCTGGCACTTaGGAAAGCCCAGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGCNPGT*ESPGGK
Trigger: CTTCCCACCTGGGCTTTCCAAAGTGCCAGGATTACA...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGTGGAGTTTCATTCTCTaGTTCTTCTACAGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: VKKPTISLPALSETHLSKWSFIL*FFYSGD
Trigger: GTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCA...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTCTTTCTCATCCTTTTaGGTTTCCTCAGAAGACTTA +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFSFSSF*VSSEDL
Trigger: TAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312239.10
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGCAATGGCAGACAAGATaGCATATTCCATCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMQWQTR*HIPSGF
Trigger: GAAGCCTGATGGAATATGCAATCTTGTCTGCCATTG...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCACTGGCATACCGTTCTaGATGCTTTCTACAAATATA +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFTGIPF*MLSTNI
Trigger: TATATTTGTAGAAAGCATCAAGAACGGTATGCCAGT...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTTTACAACTCAGTCAGTGCTATATTGTGCCTCCATTTTACTTCTTACAACAGGAAAGATaGCCTTACATGCAACACAAA +
Preference number: 5 (lower is better)
Translates to: RQEALQLSQCYIVPPFYFLQQER*PYMQHK
Trigger: TTTGTGTTGCATGTAAGGCAATCTTTCCTGTTGTAA...GAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
CDS-3UTR CAA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGACTTTTGAGGCCTCCTTaGACATACCAGTGGTTGACA +
Preference number: 5 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGLLRPP*TYQWLT
Trigger: TGTCAACCACTGGTATGTCAAAGGAGGCCTCAAAAG...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAAATCGCTTCAGCCTTTaGAGGCCTCCTTTGACATAC +
Preference number: 5 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGNRFSL*RPPLTY
Trigger: GTATGTCAAAGGAGGCCTCAAAAGGCTGAAGCGATT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp GTTAAGAAGCCAACAATCTCTCTCCCAGCACTTTCTGAGACTCATTTATCAAAGACTGGCATACCGTTCTaGATGCTTTCTACAAATATA +
Preference number: 5 (lower is better)
Translates to: VKKPTISLPALSETHLSKTGIPF*MLSTNI
Trigger: TATATTTGTAGAAAGCATCAAGAACGGTATGCCAGT...CTTTGATAAATGAGTCTCAGAAAGTGCTGGGAGAGAGATTGTTGGCTTCTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAGAGATCACCCTGTTTTaGGCTTATTCCCAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGEITLF*AYSQSC
Trigger: ACAGCTTTGGGAATAAGCCAAAAACAGGGTGATCTC...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp AGGTTTCCTTTAATTAAGTCCATGTGGATGCATAGTCAGAATCCATGTGCAATGTCTTTCTCATCCTTTTaGGTTTCCTCAGAAGACTTA +
Preference number: 5 (lower is better)
Translates to: RFPLIKSMWMHSQNPCAMSFSSF*VSSEDL
Trigger: TAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGA...CATTGCACATGGATTCTGACTATGCATCCACATGGACTTAATTAAAGGAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAATTTTACTTCCTTTCTaGCACTGGTTGCAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGILLPF*HWLQAS
Trigger: AGAAGCCTGCAACCAGTGCAAGAAAGGAAGTAAAAT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS-3UTR CAA 90 bp CAAACATTCTTTTATCTCAATGTAAGTAAGGCGTATGTCTTTGACAGTTGTGGAAGTGATATAGAGAACTaGTGCTTGCTGTTAAGGGAA +
Preference number: 5 (lower is better)
Translates to: QTFFYLNVSKAYVFDSCGSDIEN*CLLLRE
Trigger: TTCCCTTAACAGCAAGCACAAGTTCTCTATATCACT...TCCACAACTGTCAAAGACATACGCCTTACTTACATTGAGATAAAAGAATGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438032.6
CDS CAA 90 bp GGCCTAGCTTTCCCCCGCTGGGCAGCTGAGACTTTAGGTGCAGGTTaGGACCCTCTCTGCTTCACAGATGCGGCCTTCCCTGGGGACTTG +
Preference number: 6 (lower is better)
Translates to: GLAFPRWAAETLGAG*DPLCFTDAAFPGDL
Trigger: CAAGTCCCCAGGGAAGGCCGCATCTGTGAAGCAGAGAGGGTCCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS CCA 72 bp GAGGCACCGCTCTCATTCAAACCCCACCGCCTAAGGTaGCGAGTAACCAGTTCTACGTTTCCCACCGGGGGA +
Preference number: 6 (lower is better)
Translates to: EAPLSFKPHRLR*RVTSSTFPTGG
Trigger: TCCCCCGGTGGGAAACGTAGAACTGGTTACTCGCCACCTTAGGCGGTGGGGTTTGAATGAGAGCGGTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414993.1
ENST00000419490.5
ENST00000443615.1
CDS CAA 72 bp TTCCCCCGCTGGGCAGCTGAGACTTTAGGTGCAGGTTaGGACCCTCTCTGCTTCACAGATGCGGCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: FPRWAAETLGAG*DPLCFTDAAFP
Trigger: AGGGAAGGCCGCATCTGTGAAGCAGAGAGGGTCCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS TCA 72 bp CTTAGGCAAGGGCCTAGCTTTCCCCCGCTGGGCAGCTaGGACTTTAGGTGCAGGTTTGGACCCTCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LRQGPSFPPLGS*DFRCRFGPSLL
Trigger: AAGCAGAGAGGGTCCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAGGCCCTTGCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS GCA 72 bp GCAGCTGAGACTTTAGGTGCAGGTTTGGACCCTCTCTaGTTCACAGATGCGGCCTTCCCTGGGGACTTGGCT +
Preference number: 6 (lower is better)
Translates to: AAETLGAGLDPL*FTDAAFPGDLA
Trigger: AGCCAAGTCCCCAGGGAAGGCCGCATCTGTGAAGCAGAGAGGGTCCAAACCTGCACCTAAAGTCTCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS CCA 72 bp GGTGCTTTCTTAGGCAAGGGCCTAGCTTTCCCCCGCTaGGCAGCTGAGACTTTAGGTGCAGGTTTGGACCCT +
Preference number: 6 (lower is better)
Translates to: GAFLGKGLAFPR*AAETLGAGLDP
Trigger: AGGGTCCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAGGCCCTTGCCTAAGAAAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS GCA 72 bp TCTGGTCTTCTTGGCAGGCGTTTTGGCCTTAGGAGGTaGTTTCTTAGGCAAGGGCCTAGCTTTCCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: SGLLGRRFGLRR*FLRQGPSFPPL
Trigger: CAGCGGGGGAAAGCTAGGCCCTTGCCTAAGAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAAGACCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS CCA 72 bp TTTGGACCCTCTCTGCTTCACAGATGCGGCCTTCCCTaGGGACTTGGCTGGGGTTTTCTTCTGCAACCTTCT +
Preference number: 6 (lower is better)
Translates to: FGPSLLHRCGLP*GLGWGFLLQPS
Trigger: AGAAGGTTGCAGAAGAAAACCCCAGCCAAGTCCCCAGGGAAGGCCGCATCTGTGAAGCAGAGAGGGTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS GCA 72 bp AACACTCTCCCAAAGCAGGTCAAGACAAGACTCCTCTaGACCAGGTGGGTCGGAGTTCCTGCATTAGCACAG +
Preference number: 6 (lower is better)
Translates to: NTLPKQVKTRLL*TRWVGVPALAQ
Trigger: CTGTGCTAATGCAGGAACTCCGACCCACCTGGTGCAGAGGAGTCTTGTCTTGACCTGCTTTGGGAGAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491748.1
CDS CAA 72 bp ACTGTGGATGAGGGTCTGGTCTTCTTGGCAGGCGTTTaGGCCTTAGGAGGTGCTTTCTTAGGCAAGGGCCTA +
Preference number: 6 (lower is better)
Translates to: TVDEGLVFLAGV*ALGGAFLGKGL
Trigger: TAGGCCCTTGCCTAAGAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTCATCCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS CAA 90 bp TTCTTGATGACTGTGGATGAGGGTCTGGTCTTCTTGGCAGGCGTTTaGGCCTTAGGAGGTGCTTTCTTAGGCAAGGGCCTAGCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: FLMTVDEGLVFLAGV*ALGGAFLGKGLAFP
Trigger: GGGGAAAGCTAGGCCCTTGCCTAAGAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTCATCCACAGTCATCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS CAA 90 bp CCACCACTAGGTTTCTTGATGACTGTGGATGAGGGTCTGGTCTTCTaGGCAGGCGTTTTGGCCTTAGGAGGTGCTTTCTTAGGCAAGGGC +
Preference number: 6 (lower is better)
Translates to: PPLGFLMTVDEGLVF*AGVLALGGAFLGKG
Trigger: GCCCTTGCCTAAGAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTCATCCACAGTCATCAAGAAACCTAGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS TCA 72 bp CTCTTACAAACGCTCAGATGGGCGACTGTAACTTTCTaGCGACCTACCGAGGCACCGCTCTCATTCAAACCC +
Preference number: 6 (lower is better)
Translates to: LLQTLRWATVTF*RPTEAPLSFKP
Trigger: GGGTTTGAATGAGAGCGGTGCCTCGGTAGGTCGTCAGAAAGTTACAGTCGCCCATCTGAGCGTTTGTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417710.5
ENST00000443615.1
CDS GCA 72 bp CGCGTGGATCAGCTGAGCTCCTACTATAAGTGGGAGTaGCTTAGGATGGACGAGTTCACCTTGAGACGTATC +
Preference number: 6 (lower is better)
Translates to: RVDQLSSYYKWE*LRMDEFTLRRI
Trigger: GATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGATCCACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312239.10
ENST00000375000.5
ENST00000414993.1
ENST00000417710.5
ENST00000437575.5
ENST00000438032.6
ENST00000487117.1
CDS CCA 72 bp CTTGTCCGCGTGGATCAGCTGAGCTCCTACTATAAGTaGGAGTGCCTTAGGATGGACGAGTTCACCTTGAGA +
Preference number: 6 (lower is better)
Translates to: LVRVDQLSSYYK*ECLRMDEFTLR
Trigger: TCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGATCCACGCGGACAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312239.10
ENST00000375000.5
ENST00000414993.1
ENST00000417710.5
ENST00000437575.5
ENST00000438032.6
ENST00000487117.1
CDS CAA 90 bp CTTGCACTGGTTGCAGGCTTCTTTGAGGAGCCACCACTAGGTTTCTaGATGACTGTGGATGAGGGTCTGGTCTTCTTGGCAGGCGTTTTG +
Preference number: 6 (lower is better)
Translates to: LALVAGFFEEPPLGF*MTVDEGLVFLAGVL
Trigger: CAAAACGCCTGCCAAGAAGACCAGACCCTCATCCACAGTCATCAAGAAACCTAGTGGTGGCTCCTCAAAGAAGCCTGCAACCAGTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS TCA 72 bp TCTACCTTCTCACCTAACTTGTCCGCGTGGATCAGCTaGGCTCCTACTATAAGTGGGAGTGCCTTAGGATGG +
Preference number: 6 (lower is better)
Translates to: STFSPNLSAWIS*APTISGSALGW
Trigger: CCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGATCCACGCGGACAAGTTAGGTGAGAAGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312239.10
ENST00000375000.5
ENST00000414993.1
ENST00000417710.5
ENST00000438032.6
ENST00000487117.1
CDS GCA 72 bp CTTCTCTTCATTCTCAGGTTCCCCCTTTGGCTGCTCTaGCTCACTCGAAGTAGCAGGTGGAGTTTCATTCTC +
Preference number: 6 (lower is better)
Translates to: LLFILRFPLWLL*LTRSSRWSFIL
Trigger: GAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312239.10
ENST00000375000.5
ENST00000417710.5
ENST00000424732.5
ENST00000438032.6
ENST00000487117.1
CDS GCA 72 bp TCTTCCTTCTCTTCATTCTCAGGTTCCCCCTTTGGCTaGTCTGCCTCACTCGAAGTAGCAGGTGGAGTTTCA +
Preference number: 6 (lower is better)
Translates to: SSFSSFSGSPFG*SASLEVAGGVS
Trigger: TGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312239.10
ENST00000375000.5
ENST00000417710.5
ENST00000424732.5
ENST00000438032.6
ENST00000487117.1
CDS GCA 72 bp CTGATTTCTTCAGCTGGAATGTCCCCGAAGCACCTTTaGCAGTTATCTGTTCTAACTGGCCCCTCTCTACTG +
Preference number: 6 (lower is better)
Translates to: LISSAGMSPKHL*QLSVLTGPSLL
Trigger: CAGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCCAGCTGAAGAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000419948.5
ENST00000438032.6
CDS GCA 72 bp CTTCGGCTCATTCATGGCAGCAATGGCAGACAAGATTaGATATTCCATCAGGCTTCCACCAAGCAGGGGTTT +
Preference number: 6 (lower is better)
Translates to: LRLIHGSNGRQD*IFHQASTKQGF
Trigger: AAACCCCTGCTTGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAATGAGCCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000419948.5
ENST00000438032.6
ENST00000491748.1
CDS CAA 72 bp CCTGATTTCTTCAGCTGGAATGTCCCCGAAGCACCTTaGCCAGTTATCTGTTCTAACTGGCCCCTCTCTACT +
Preference number: 6 (lower is better)
Translates to: PDFFSWNVPEAP*PVICSNWPLST
Trigger: AGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCCAGCTGAAGAAATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000419948.5
ENST00000438032.6
CDS CAA 72 bp TCTTCGGCTCATTCATGGCAGCAATGGCAGACAAGATaGCATATTCCATCAGGCTTCCACCAAGCAGGGGTT +
Preference number: 6 (lower is better)
Translates to: SSAHSWQQWQTR*HIPSGFHQAGV
Trigger: AACCCCTGCTTGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAATGAGCCGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000419948.5
ENST00000438032.6
ENST00000491748.1
CDS CAA 72 bp GGTTTCTTGATGACTGTGGATGAGGGTCTGGTCTTCTaGGCAGGCGTTTTGGCCTTAGGAGGTGCTTTCTTA +
Preference number: 6 (lower is better)
Translates to: GFLMTVDEGLVF*AGVLALGGAFL
Trigger: TAAGAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTCATCCACAGTCATCAAGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000438032.6
ENST00000488722.5
CDS TCA 72 bp TATCTTCTACCTTCTAACTTGTCCGCGTGGATCAGCTaGGCTCCTACTATAAGTGGGAGTGCCTTAGGATGG +
Preference number: 6 (lower is better)
Translates to: YLLPSNLSAWIS*APTISGSALGW
Trigger: CCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGATCCACGCGGACAAGTTAGAAGGTAGAAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437575.5
CDS CAA 90 bp ACAAAGGCGAGTAAAGGCCAGTGGGAGGACATCCTCCAATTTTACTaGTGGTTCTGGATCCACTGCAGAGCTCCTATTCTGTTTGATGAC +
Preference number: 6 (lower is better)
Translates to: TKASKGQWEDILQFY*WFWIHCRAPILFDD
Trigger: GTCATCAAACAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419948.5
CDS CAA 90 bp ACAAAGGCGAGTAAAGGCCAGTGGGAGGACATCCTCCAATTTTACTaGTGGTTCTGGATCCACTGCAGAGCTCCTATTCTTTCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: TKASKGQWEDILQFY*WFWIHCRAPILSVS
Trigger: AGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000424732.5
ENST00000438032.6
CDS CCA 72 bp AAAGGCCAGTGGGAGGACATCCTCCAATTTTACTTGTaGTTCTGGATCCACTGCAGAGCTCCTATTCTTTCT +
Preference number: 6 (lower is better)
Translates to: KGQWEDILQFYL*FWIHCRAPILS
Trigger: AGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000424732.5
ENST00000438032.6
CDS CCA 72 bp AGCTTCTTTAGGTTCACAAAGGCGAGTAAAGGCCAGTaGGAGGACATCCTCCAATTTTACTTGTGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: SFFRFTKASKGQ*EDILQFYLWFW
Trigger: CCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000419948.5
ENST00000424732.5
ENST00000438032.6
CDS CCA 72 bp CAGTGGGAGGACATCCTCCAATTTTACTTGTGGTTCTaGATCCACTGCAGAGCTCCTATTCTGTTTGATGAC +
Preference number: 6 (lower is better)
Translates to: QWEDILQFYLWF*IHCRAPILFDD
Trigger: GTCATCAAACAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419948.5
CDS CCA 72 bp AAAGGCCAGTGGGAGGACATCCTCCAATTTTACTTGTaGTTCTGGATCCACTGCAGAGCTCCTATTCTGTTT +
Preference number: 6 (lower is better)
Translates to: KGQWEDILQFYL*FWIHCRAPILF
Trigger: AAACAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419948.5
CDS TCA 72 bp ATATCACAGCGCAGCACGTTACTCACTTGTTTGTGGTaGCATTGGTGTAAACAAACCTACAGTGCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: ISQRSTLLTCLW*HWCKQTYSAAS
Trigger: ACTGGCAGCACTGTAGGTTTGTTTACACCAATGTCACCACAAACAAGTGAGTAACGTGCTGCGCTGTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375003.6
CDS CCA 72 bp CAGTGGGAGGACATCCTCCAATTTTACTTGTGGTTCTaGATCCACTGCAGAGCTCCTATTCTTTCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: QWEDILQFYLWF*IHCRAPILSVS
Trigger: AGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000424732.5
ENST00000438032.6
CDS GCA 72 bp GACAAGACTCCTCTGCACCAGGTGGGTCGGAGTTCCTaGATTAGCACAGATATGTTTTACAATAAATTGTCA +
Preference number: 6 (lower is better)
Translates to: DKTPLHQVGRSS*ISTDMFYNKLS
Trigger: TGACAATTTATTGTAAAACATATCTGTGCTAATGCAGGAACTCCGACCCACCTGGTGCAGAGGAGTCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491748.1
CDS TCA 72 bp ATACTTATGGATGATGTATTTTCGAATAGCAACCACTaGTGCACCACTCTTCTGGAAGCATGCCTTAATGGC +
Preference number: 6 (lower is better)
Translates to: ILMDDVFSNSNH*CTTLLEACLNG
Trigger: GCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312239.10
ENST00000375003.6
ENST00000419948.5
ENST00000424732.5
ENST00000438032.6
CDS TCA 72 bp CACCCTAAAATAATAGCCAACCTAACCCAAAGATACTaGCAACTGTACCCAATAAGCAGGTTAACCAGTTAT +
Preference number: 6 (lower is better)
Translates to: HPKIIANLTQRY*QLYPISRLTSY
Trigger: ATAACTGGTTAACCTGCTTATTGGGTACAGTTGTCAGTATCTTTGGGTTAGGTTGGCTATTATTTTAGGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491748.1