Pregenerated sensors for HOXD9 (Homo sapiens)
Ensembl gene IDs: ENSG00000128709Ensembl transcript IDs: ENST00000249499.8
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCCCACGCGAGCCCAGCCTTCAGGGGAGAGAGCAGCGCGTCCAATaGACTGAGGACAAACCCCAACCCGCCCGAGGCCCTGGGCTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: RPREPSLQGREQRVQ*TEDKPQPARGPGLL Trigger: GAGGAGCCCAGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTGCTCTCTCCCCTGAAGGCTGGGCTCGCGTGGGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR TCA 90 bp | ACGCGAGCCCAGCCTTCAGGGGAGAGAGCAGCGCGTCCAATGCACTaGGGACAAACCCCAACCCGCCCGAGGCCCTGGGCTCCTCTAAGC | + |
|
Preference number: 1 (lower is better) Translates to: TRAQPSGERAARPMH*GQTPTRPRPWAPLS Trigger: GCTTAGAGGAGCCCAGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTGCTCTCTCCCCTGAAGGCTGGGCTCGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CCA 90 bp | ACAAACCCCAACCCGCCCGAGGCCCTGGGCTCCTCTAAGCCTCACTaGAGATCTCCACCGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGG | + |
|
Preference number: 1 (lower is better) Translates to: TNPNPPEALGSSKPH*RSPPRSRVLPEERG Trigger: CCCCCTTTCCTCAGGGAGCACGCGGGACCTCGGTGGAGATCTCCAGTGAGGCTTAGAGGAGCCCAGGGCCTCGGGCGGGTTGGGGTTTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR GCA 90 bp | TGGGCTCCTCTAAGCCTCACTGGAGATCTCCACCGAGGTCCCGCGTaGTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCG | + |
|
Preference number: 1 (lower is better) Translates to: WAPLSLTGDLHRGPA*SLRKGGFRNWWATP Trigger: CGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCGGTGGAGATCTCCAGTGAGGCTTAGAGGAGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCACAAATCCGCTGCCCTTaGGCGCTCCCGCCAGCACCG | + |
|
Preference number: 2 (lower is better) Translates to: RGLSQLVGNPAGLHRGLAQIRCP*ALPPAP Trigger: CGGTGCTGGCGGGAGCGCTCAAGGGCAGCGGATTTG...TGCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CAA 90 bp | CCCGCCGGGCTTCACCGTGGGCTAGCAGCCGGGGTGTCCGCACTGTaGTCGCTCTGCCTTCATTCTTGGAATTGGGGCGCACTTGGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: PAGLHRGLAAGVSAL*SLCLHSWNWGALGP Trigger: GGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGACACCCCGGCTGCTAGCCCACGGTGAAGCCCGGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCGAATTGGGGCGCACTTaGCCCCTGTTTGGGCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: KGAFATGGQPRRASPWASELGRT*PLFGQC Trigger: GCACTGCCCAAACAGGGGCCAAGTGCGCCCCAATTC...GCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTCTGCCTTCATTCTTaGAATTGGGGCGCACTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RVLPEERGLSQLVGNPAGLCLHS*NWGALG Trigger: GCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAG...CCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCAGGAAAGAGAGGGAGTaGGATAGGGCGAAACCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: KGAFATGGQPRRASPWASRKERE*DRAKPQ Trigger: TTGGGGTTTCGCCCTATCCCACTCCCTCTCTTTCCT...GCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCACTTCATTCTTGGAATTaGGGCGCACTTGGCCCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RGLSQLVGNPAGLHRGLALHSWN*GALGPC Trigger: ACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAG...TGCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CCA 90 bp | GCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCAGAAGTCCAAGTCGCTaGAGAGTTTCTGGAAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: ACSLRKGGFRNWWATPPGRSPSR*RVSGNQ Trigger: TTGATTTCCAGAAACTCTCCAGCGACTTGGACTTCT...GCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAAACCCCAAAGCCACTTaGTTTTTCCAACACGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ERGLSQLVGNPAGLHRGLNPKAT*FFQHVN Trigger: GTTTACGTGTTGGAAAAACCAAGTGGCTTTGGGGTT...TAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTAGCAGCCGGGGTGTCCGCACTGTTGTCGCTCTGCCTTCATTCTTGGAATTTCTTAAGGAACCAATaGAGCAGGAAAGAGAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GLAAGVSALLSLCLHSWNFLRNQ*SRKERE Trigger: CTCCCTCTCTTTCCTGCTCCATTGGTTCCTTAAGAA...ATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGACACCCCGGCTGCTAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CCA 72 bp | TTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTaGGCTAGCAGCCGGGGTGTCCGCACTGTTGTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: FATGGQPRRASP*ASSRGVRTVVA Trigger: AGCGACAACAGTGCGGACACCCCGGCTGCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CCA 72 bp | AACCCGCCCGAGGCCCTGGGCTCCTCTAAGCCTCACTaGAGATCTCCACCGAGGTCCCGCGTGCTCCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NPPEALGSSKPH*RSPPRSRVLPE Trigger: CTCAGGGAGCACGCGGGACCTCGGTGGAGATCTCCAGTGAGGCTTAGAGGAGCCCAGGGCCTCGGGCGGGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR TCA 72 bp | CAGCCTTCAGGGGAGAGAGCAGCGCGTCCAATGCACTaGGGACAAACCCCAACCCGCCCGAGGCCCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QPSGERAARPMH*GQTPTRPRPWA Trigger: AGCCCAGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTGCTCTCTCCCCTGAAGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR GCA 72 bp | GAGCCCAGCCTTCAGGGGAGAGAGCAGCGCGTCCAATaGACTGAGGACAAACCCCAACCCGCCCGAGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: EPSLQGREQRVQ*TEDKPQPARGP Trigger: AGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTGCTCTCTCCCCTGAAGGCTGGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGCGCGTCCAATGCACTGAGGACAAACCCCAACCCGCCCGAGGCCCTGGGCGGGGTGTCCGCACTGTaGTCGCTCTGCCTTCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSASNALRTNPNPPEALGGVSAL*SLCLHS Trigger: AGAATGAAGGCAGAGCGACAACAGTGCGGACACCCC...GCCCAGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR GCA 72 bp | GGGCTAGCAGCCGGGGTGTCCGCACTGTTGTCGCTCTaGCTTCATTCTTGGAATTGGGGCGCACTTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GLAAGVSALLSL*LHSWNWGALGP Trigger: GGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGACACCCCGGCTGCTAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGCCTTCATTCTTGGAATaGGGGCGCACTTGGCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRKGGFRNWWATPPGFTVPSFLE*GRTWPL Trigger: CAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGG...CACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR GCA 72 bp | CTAAGCCTCACTGGAGATCTCCACCGAGGTCCCGCGTaGTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLTGDLHRGPA*SLRKGGFRNWW Trigger: CCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCGGTGGAGATCTCCAGTGAGGCTTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCACCGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGCTCTGCCTTCATTCTaGGAATTGGGGCGCACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPPRSRVLPEERGLSQLVALPSF*ELGRTW Trigger: CCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGC...CACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCGGTGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAATGGAGCAGGAAAGAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTACAAATCCGCTGCCCTaGAGCGCTCCCGCCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: TNGAGKRGSGIGRNPKATTNPLP*SAPAST Trigger: GGTGCTGGCGGGAGCGCTCAAGGGCAGCGGATTTGT...AGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTCTTTCCTGCTCCATTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CCA 72 bp | TCCGCACTGTTGTCGCTCTGCCTTCATTCTTGGAATTaGGGCGCACTTGGCCCCTGTTTGGGCAGTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SALLSLCLHSWN*GALGPCLGSAG Trigger: CCCAGCACTGCCCAAACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTAGCAGCCGGGGTGTCCGCACTGTTGTCGCTCTGCCTTCATTCTTGGAATGCTCCCCAAGCCAGCTaGCACTCACAAAATATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLAAGVSALLSLCLHSWNAPQAS*HSQNIA Trigger: TGCTATATTTTGTGAGTGCAAGCTGGCTTGGGGAGC...ATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGACACCCCGGCTGCTAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CCA 72 bp | CAGCATTTATTAGTAGGAAGCAGTAACATTTACAACTaGTCCTCGGGCAGGAACCGGGAGGGCCACCACCCG | + |
|
Preference number: 3 (lower is better) Translates to: QHLLVGSSNIYN*SSGRNREGHHP Trigger: CGGGTGGTGGCCCTCCCGGTTCCTGCCCGAGGACCAGTTGTAAATGTTACTGCTTCCTACTAATAAATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCGCTCTGCCTTCATTCTTGGAATTGGGGCGCACTTGGCCCCTGTTTGGGCAAAACCCCAAAGCCACTaGGTTTTTCCAACACGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: CRSAFILGIGAHLAPVWAKPQSH*VFPTRK Trigger: TTTACGTGTTGGAAAAACCAAGTGGCTTTGGGGTTT...TGCCCAAACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CCA 72 bp | AGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTTaGTTTTTCCAACACGTAAACGAGCAAATACAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGSGIGRNPKAT*FFQHVNEQIQS Trigger: ACTCTGTATTTGCTCGTTTACGTGTTGGAAAAACCAAGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CCA 72 bp | AAAAAGAAGAAGAAGTCCAAGTCGCTGGAGAGTTTCTaGAAATCAAGCACCAAACACCCACAAAGGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: KKKKKSKSLESF*KSSTKHPQRKT Trigger: TGTTTTCCTTTGTGGGTGTTTGGTGCTTGATTTCCAGAAACTCTCCAGCGACTTGGACTTCTTCTTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCCGTAGTGGCGCCCGTTaGCTGGGCCGCTGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGAFATGGQPRRASPWASRSGAR*LGRWGQ Trigger: CTGGCCCCAGCGGCCCAGCCAACGGGCGCCACTACG...GCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR TCA 90 bp | CGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCAAATCCGCTGCCCTTaGGCGCTCCCGCCAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RVLPEERGLSQLVGNPAGQIRCP*ALPPAP Trigger: CGGTGCTGGCGGGAGCGCTCAAGGGCAGCGGATTTG...CCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGCGTCCAATGCACTGAGGACAAACCCCAACCCGCCCGAGGCCCTGGGCTCAGAACTCGGGGCCGCTaGTCCCCTGGGACTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRVQCTEDKPQPARGPGLRTRGR*SPGTPG Trigger: CCCGGGAGTCCCAGGGGAGCAGCGGCCCCGAGTTCT...GAGCCCAGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCAGCCCACCGAGGTCCCGCGTaGTCCCTGAGGAAAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSQLVGNPAGLHRGLAAHRGPA*SLRKGG Trigger: GCCCCCTTTCCTCAGGGAGCACGCGGGACCTCGGTG...GGCTGCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR TCA 90 bp | CGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGGCGCGTCCAATGCACTaGGGACAAACCCCAACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RVLPEERGLSQLVGNPAGARPMH*GQTPTR Trigger: GCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGC...CCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCAGGATCGGGTGGTCGCTaGAAGCTGAGGGCTCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: RGLSQLVGNPAGLHRGLAGSGGR*KLRAPT Trigger: CGTCGGAGCCCTCAGCTTGCAGCGACCACCCGATCC...TGCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGGGGCTTTCGCAACTaGTGGGCAACCCCGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPRSRVLPEERGLSQLVGGFRN*WATPPG Trigger: GCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCC...CACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCGGTGGAGA 68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | CGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGTGCTGCTGCTGCGGCTaGGAATGCTGCTTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVLPEERGLSQLVGNPAGCCCCG*ECCFSS Trigger: GGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCA...CCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTTCATTCTTGGAATTGGGGCGCACTTGGCCCCTGTTTGGGCAGTGCTGGTGGTCGCTGCAAGCTaGGGGCTCCGACGAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAFILGIGAHLAPVWAVLVVAAS*GLRRAA Trigger: GGCGGCTCGTCGGAGCCCTCAGCTTGCAGCGACCAC...CAGCACTGCCCAAACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGAGCAGGAAAGAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTTGGCCATCAGCCACACCTaGAGGCCGGCCCTGCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QWSRKEREWDRAKPQSHLAISHT*RPALRA Trigger: GGCGCGCAGGGCCGGCCTGCAGGTGTGGCTGATGGC...CAAGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTCTTTCCTGCTCCATTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCACCGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGCTGCCGCCTTCTCCTaGAGGAACGAGTTGCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPRSRVLPEERGLSQLVAAAFS*RNELHE Trigger: CTCGTGCAACTCGTTCCTGCAGGAGAAGGCGGCAGC...CACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCGGTGGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGCGTCCAATGCACTGAGGACAAACCCCAACCCGCCCGAGGCCCTGGGCTCAGAACACGGCCGATCTaGGGGCAAAACTACACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRVQCTEDKPQPARGPGLRTRPI*GQNYTR Trigger: CCTCGTGTAGTTTTGCCCCCAGATCGGCCGTGTTCT...GAGCCCAGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | CGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCGAGCAGCGCGTCCAATaGACTGAGGACAAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGPACSLRKGGFRNWWATEQRVQ*TEDKPQ Trigger: TTGGGGTTTGTCCTCAGTGCATTGGACGCGCTGCTC...GGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCGCGTCCAATGCACTGAGGACAAACCCCAACCCGCCCGAGGCCCTGGGCAGGAAAGAGAGGGAGTaGGATAGGGCGAAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSASNALRTNPNPPEALGRKERE*DRAKPQ Trigger: TTGGGGTTTCGCCCTATCCCACTCCCTCTCTTTCCT...GCCCAGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGCGTCCAATGCACTGAGGACAAACCCCAACCCGCCCGAGGCCCTGGGCTCTTTAGGGCCAGCGTCTaGGCTCCATTTGATCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRVQCTEDKPQPARGPGLFRASV*APFDQV Trigger: GACCTGATCAAATGGAGCCCAGACGCTGGCCCTAAA...GAGCCCAGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCACCGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGTCAAGTTGCTGCTGCTaGGGCTGCGAATGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPPRSRVLPEERGLSQLVSSCCC*GCECCF Trigger: GAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGA...CACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCGGTGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | CGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCTTGTTTGGGTCAAGTTaGTGCTGCTGCGGCTGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGPACSLRKGGFRNWWATLFGSS*CCCGCE Trigger: TTCGCAGCCGCAGCAGCAGCAACTTGACCCAAACAA...GGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTACGGGTCAGTCTCCTTTaGGGCATTTCTCCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERGLSQLVGNPAGLHRGLRVSLL*GISPCS Trigger: TGAGCAAGGAGAAATGCCCCAAAGGAGACTGACCCG...TAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTGTCCGCACTGTTGTCGCTCTGCCTTCATTCTTGGAATTGGGGCGCACTTGGCTTTCGCAACTGGTaGGCAACCCCGCCGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVSALLSLCLHSWNWGALGFRNW*ATPPGF Trigger: GAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCC...AAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGACACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CAA 72 bp | CTTCACCGTGGGCTAGCAGCCGGGGTGTCCGCACTGTaGTCGCTCTGCCTTCATTCTTGGAATTGGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRGLAAGVSAL*SLCLHSWNWGA Trigger: TGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGACACCCCGGCTGCTAGCCCACGGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CAA 72 bp | GTCCGCACTGTTGTCGCTCTGCCTTCATTCTTGGAATaGGGGCGCACTTGGCCCCTGTTTGGGCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRTVVALPSFLE*GRTWPLFGQCW Trigger: CCAGCACTGCCCAAACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTAGCAGCCGGGGTGTCCGCACTGTTGTCGCTCTGCCTTCATTCTTGGAATTGCGGCTGCGAATGCTaGTTCTCCTCCTCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLAAGVSALLSLCLHSWNCGCEC*FSSSFS Trigger: GCTGAAGGAGGAGGAGAAGCAGCATTCGCAGCCGCA...ATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGACACCCCGGCTGCTAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCAACCCCAAAGCCACTTaGTTTTTCCAACACGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ACSLRKGGFRNWWATPPGNPKAT*FFQHVN Trigger: GTTTACGTGTTGGAAAAACCAAGTGGCTTTGGGGTT...GCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGCGTCCAATGCACTGAGGACAAACCCCAACCCGCCCGAGGCCCTGGGCTCTTCTTAAGGAACCAATaGAGCAGGAAAGAGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRVQCTEDKPQPARGPGLFLRNQ*SRKERE Trigger: CTCCCTCTCTTTCCTGCTCCATTGGTTCCTTAAGAA...GAGCCCAGGGCCTCGGGCGGGTTGGGGTTTGTCCTCAGTGCATTGGACGCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTTCATTCTTGGAATTGGGGCGCACTTGGCCCCTGTTTGGGCAGTGCTGACCTCGTCGCCCTCATaGCCTATAAGCGAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SAFILGIGAHLAPVWAVLTSSPS*PISEST Trigger: CGTGGACTCGCTTATAGGCCATGAGGGCGACGAGGT...CAGCACTGCCCAAACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | ACCAATGGAGCAGGAAAGAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTCTTCAGCGAACAGCCTaGGATCGGGTGGTCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNGAGKRGSGIGRNPKATLQRTA*DRVVAA Trigger: TGCAGCGACCACCCGATCCCAGGCTGTTCGCTGAAG...AGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTCTTTCCTGCTCCATTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAAGTCGCTGGAGAGTTTCTGGAAATCAAGCACCAAACACCCACAAAGGACGCCGGGCTTCACCGTaGGCTAGCAGCCGGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPSRWRVSGNQAPNTHKGRRASP*ASSRGV Trigger: GACACCCCGGCTGCTAGCCCACGGTGAAGCCCGGCG...TCCTTTGTGGGTGTTTGGTGCTTGATTTCCAGAAACTCTCCAGCGACTTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGCCTCACTGGAGATCTCCACCGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGCACTGTTGTCGCTCTaGCTTCATTCTTGGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLTGDLHRGPACSLRKGALLSL*LHSWNW Trigger: CCAATTCCAAGAATGAAGGCAGAGCGACAACAGTGC...CCCTTTCCTCAGGGAGCACGCGGGACCTCGGTGGAGATCTCCAGTGAGGCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGCTCCCCAAGCCAGCTTGCACTCACAAAATATAGCATTTCTTAAGGAACGGGTGGAGCGAGCGTaGATCCAGTTCGCGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERAPQASLHSQNIAFLKERVERA*IQFAAG Trigger: CCCCGCCGCGAACTGGATCCACGCTCGCTCCACCCG...TTCCTTAAGAAATGCTATATTTTGTGAGTGCAAGCTGGCTTGGGGAGCCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCAGAAGTCCAAGTCGCTaGAGAGTTTCTGGAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGPACSLRKGGFRNWWATRSPSR*RVSGNQ Trigger: TTGATTTCCAGAAACTCTCCAGCGACTTGGACTTCT...GGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTTCATTCTTGGAATTGGGGCGCACTTGGCCCCTGTTTGGGCAGTGCTGCTCTGCCTTCATTCTTaGAATTGGGGCGCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAFILGIGAHLAPVWAVLLCLHS*NWGALG Trigger: GCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAG...CAGCACTGCCCAAACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAAGTCGCTGGAGAGTTTCTGGAAATCAAGCACCAAACACCCACAAAGGAACCCGCCCGAGGCCCTaGGCTCCTCTAAGCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPSRWRVSGNQAPNTHKGTRPRP*APLSLT Trigger: AGTGAGGCTTAGAGGAGCCCAGGGCCTCGGGCGGGT...TCCTTTGTGGGTGTTTGGTGCTTGATTTCCAGAAACTCTCCAGCGACTTGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTTGGTTTTTCCAACACCACTGGAAGACATTTTaGGGCGTCCCGCACTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRGSGIGRNPKATWFFQHHWKTF*GVPHSH Trigger: GTGGGAGTGCGGGACGCCTCAAAATGTCTTCCAGTG...GTGTTGGAAAAACCAAGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | TACACAAGAGAGGGCTCCCCAAGCCAGCTTGCACTCACAAAATATAGCATTTCTCAGCCTGGGATCGGGTaGTCGCTGCAAGCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YTREGSPSQLALTKYSISQPGIG*SLQAEG Trigger: GCCCTCAGCTTGCAGCGACCACCCGATCCCAGGCTG...AGAAATGCTATATTTTGTGAGTGCAAGCTGGCTTGGGGAGCCCTCTCTTGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGCTCCCCAAGCCAGCTTGCACTCACAAAATATAGCATTTCTTAAGGAACCTGCAGGAACGAGTTaGACGAGAACTCGGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ERAPQASLHSQNIAFLKEPAGTS*TRTRGR Trigger: GCGGCCCCGAGTTCTCGTGCAACTCGTTCCTGCAGG...TTCCTTAAGAAATGCTATATTTTGTGAGTGCAAGCTGGCTTGGGGAGCCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | ACCAATGGAGCAGGAAAGAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTAGCACTCAGTCCGTTTaGAGGAGGAGGATAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TNGAGKRGSGIGRNPKATSTQSV*RRRIRK Trigger: CTTCCTTATCCTCCTCCTCCAAACGGACTGAGTGCT...AGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTCTTTCCTGCTCCATTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAAGTCGCTGGAGAGTTTCTGGAAATCAAGCACCAAACACCCACAAAGGAGAATTGGGGCGCACTTaGCCCCTGTTTGGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSRWRVSGNQAPNTHKGELGRT*PLFGQC Trigger: GCACTGCCCAAACAGGGGCCAAGTGCGCCCCAATTC...TCCTTTGTGGGTGTTTGGTGCTTGATTTCCAGAAACTCTCCAGCGACTTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTGTCGCTCTGCCTTCATTCTTGGAATTGGGGCGCACTTGGCCCCTGTTTGAGTAACATTTACAACTaGTCCTCGGGCAGGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSLCLHSWNWGALGPCLSNIYN*SSGRNR Trigger: CCGGTTCCTGCCCGAGGACCAGTTGTAAATGTTACT...CAAACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR TCA 90 bp | TGTCGCTCTGCCTTCATTCTTGGAATTGGGGCGCACTTGGCCCCTGTTTGGGCACGTCTGGGCTCCATTTaGTCAGGTCAGCATTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: CRSAFILGIGAHLAPVWARLGSI*SGQHLL Trigger: TAATAAATGCTGACCTGATCAAATGGAGCCCAGACG...TGCCCAAACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAAGTCGCTGGAGAGTTTCTGGAAATCAAGCACCAAACACCCACAAAGGATCCTCTAAGCCTCACTaGAGATCTCCACCGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSRWRVSGNQAPNTHKGSSKPH*RSPPRS Trigger: GGACCTCGGTGGAGATCTCCAGTGAGGCTTAGAGGA...TCCTTTGTGGGTGTTTGGTGCTTGATTTCCAGAAACTCTCCAGCGACTTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCAAGTCGCTGGAGAGTTTCTGGAAATCAAGCACCAAACACCCACAAAGGAGTCTCTCTGTTAGGTTaGGAATCCTGGCCACCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSRWRVSGNQAPNTHKGVSLLG*ESWPPR Trigger: ACGAGGTGGCCAGGATTCTCAACCTAACAGAGAGAC...TCCTTTGTGGGTGTTTGGTGCTTGATTTCCAGAAACTCTCCAGCGACTTGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| 3UTR CAA 72 bp | GAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTaGGTTTTTCCAACACGTAAACGAGCAAATACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EREWDRAKPQSH*VFPTRKRANTE Trigger: CTCTGTATTTGCTCGTTTACGTGTTGGAAAAACCAAGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGGTTTTTCCAACACGTAAACGAGCAAATACAGAGTCCCCCAAATACCTCCCACGTAGTAGTTGCTaGGGGTGCCACTGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HLVFPTRKRANTESPKYLPRSSC*GCHWKT Trigger: TGTCTTCCAGTGGCACCCTCAGCAACTACTACGTGG...GAGGTATTTGGGGGACTCTGTATTTGCTCGTTTACGTGTTGGAAAAACCAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTTGGTTTTTCCAACACTCGCTGGAGAGTTTCTaGAAATCAAGCACCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KRGSGIGRNPKATWFFQHSLESF*KSSTKH Trigger: GTGTTTGGTGCTTGATTTCCAGAAACTCTCCAGCGA...GTGTTGGAAAAACCAAGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 90 bp | CGGCGGGGGAACGTACGGGTGGTAGAGGCCGCTCATCGCCGCCGCTaGCGGGGGCTGGGAGGGCACCGCGGACCACGAGGCAGAGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: RRGNVRVVEAAHRRR*RGLGGHRGPRGREH Trigger: GTGTTCTCTGCCTCGTGGTCCGCGGTGCCCTCCCAGCCCCCGGCAGCGGCGGCGATGAGCGGCCTCTACCACCCGTACGTTCCCCCGCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS TCA 90 bp | CTCCTCCTTCAGCGAACAGCCTGGGATCGGGTGGTCGCTGCAAGCTaGGGGCTCCGACGAGCCGCCCGTCCCAGTCGCGGCCCCGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLQRTAWDRVVAAS*GLRRAARPSRGPDP Trigger: GGGATCGGGGCCGCGACTGGGACGGGCGGCTCGTCGGAGCCCTCAGCTTGCAGCGACCACCCGATCCCAGGCTGTTCGCTGAAGGAGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CCA 90 bp | GCTGGGAGGGCACCGCGGACCACGAGGCAGAGAACACGGCCGATCTaGGGGCAAAACTACACGAGGCGAACTCGGCGGCGGTGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AGRAPRTTRQRTRPI*GQNYTRRTRRRWRP Trigger: CGGCCGCCACCGCCGCCGAGTTCGCCTCGTGTAGTTTTGCCCCCAGATCGGCCGTGTTCTCTGCCTCGTGGTCCGCGGTGCCCTCCCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 90 bp | GCTTCTCCTCCTCCTTCAGCGAACAGCCTGGGATCGGGTGGTCGCTaGAAGCTGAGGGCTCCGACGAGCCGCCCGTCCCAGTCGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASPPPSANSLGSGGR*KLRAPTSRPSQSRP Trigger: GGGCCGCGACTGGGACGGGCGGCTCGTCGGAGCCCTCAGCTTGCAGCGACCACCCGATCCCAGGCTGTTCGCTGAAGGAGGAGGAGAAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 90 bp | CCGCCTTCTCCTGCAGGAACGAGTTGCACGAGAACTCGGGGCCGCTaGTCCCCTGGGACTCCCGGGCCACGGAGCACTCAGTCCGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSPAGTSCTRTRGR*SPGTPGPRSTQSVW Trigger: CCAAACGGACTGAGTGCTCCGTGGCCCGGGAGTCCCAGGGGAGCAGCGGCCCCGAGTTCTCGTGCAACTCGTTCCTGCAGGAGAAGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCAACAAATCCGCTGCCCTaGAGCGCTCCCGCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGLSQLVGNPAGLHRGLATNPLP*SAPAST Trigger: GGTGCTGGCGGGAGCGCTCAAGGGCAGCGGATTTGT...TGCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCAGCCGGAATTGGGGCGCACTaGGCCCCTGTTTGGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLSQLVGNPAGLHRGLAAGIGAH*APVWAV Trigger: CACTGCCCAAACAGGGGCCAAGTGCGCCCCAATTCC...GGCTGCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CCA 90 bp | TCCTGCAGGAACGAGTTGCACGAGAACTCGGGGCCGCTGCTCCCCTaGGACTCCCGGGCCACGGAGCACTCAGTCCGTTTGGAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCRNELHENSGPLLP*DSRATEHSVRLEEE Trigger: CTCCTCCTCCAAACGGACTGAGTGCTCCGTGGCCCGGGAGTCCCAGGGGAGCAGCGGCCCCGAGTTCTCGTGCAACTCGTTCCTGCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCATCCTGCAGGAACGAGTaGCACGAGAACTCGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RGLSQLVGNPAGLHRGLASCRNE*HENSGP Trigger: CGGCCCCGAGTTCTCGTGCAACTCGTTCCTGCAGGA...TGCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CCA 90 bp | CGCTGCTCCCCTGGGACTCCCGGGCCACGGAGCACTCAGTCCGTTTaGAGGAGGAGGATAAGGAAGTGGAGGAGGAGGAGGTGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCSPGTPGPRSTQSV*RRRIRKWRRRRWWR Trigger: CCTCCACCACCTCCTCCTCCTCCACTTCCTTATCCTCCTCCTCCAAACGGACTGAGTGCTCCGTGGCCCGGGAGTCCCAGGGGAGCAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CCA 90 bp | GAATGCTGCTTCTCCTCCTCCTTCAGCGAACAGCCTGGGATCGGGTaGTCGCTGCAAGCTGAGGGCTCCGACGAGCCGCCCGTCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ECCFSSSFSEQPGIG*SLQAEGSDEPPVPV Trigger: GACTGGGACGGGCGGCTCGTCGGAGCCCTCAGCTTGCAGCGACCACCCGATCCCAGGCTGTTCGCTGAAGGAGGAGGAGAAGCAGCATTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGGGCTTTCGCAACTGGTGGGCAACCCCGCCGGGCTTCACCGTGGGCTAGCCAGTTCGCGGCGGGGTaGTTTGGGTCAAGTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KGAFATGGQPRRASPWASQFAAG*FGSSCC Trigger: GCAGCAACTTGACCCAAACAACCCCGCCGCGAACTG...GCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCAGTTGCGAAAGCCCCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 90 bp | GCGGCGGGGTTGTTTGGGTCAAGTTGCTGCTGCTGCGGCTGCGAATaGTGCTTCTCCTCCTCCTTCAGCGAACAGCCTGGGATCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAGLFGSSCCCCGCE*CFSSSFSEQPGIGW Trigger: CCACCCGATCCCAGGCTGTTCGCTGAAGGAGGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGACCCAAACAACCCCGCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 90 bp | GCGGGGTTGTTTGGGTCAAGTTGCTGCTGCTGCGGCTGCGAATGCTaGTTCTCCTCCTCCTTCAGCGAACAGCCTGGGATCGGGTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AGLFGSSCCCCGCEC*FSSSFSEQPGIGWS Trigger: CGACCACCCGATCCCAGGCTGTTCGCTGAAGGAGGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGACCCAAACAACCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 90 bp | GCGTGGATCCAGTTCGCGGCGGGGTTGTTTGGGTCAAGTTGCTGCTaGTGCGGCTGCGAATGCTGCTTCTCCTCCTCCTTCAGCGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: AWIQFAAGLFGSSCC*CGCECCFSSSFSEQ Trigger: CTGTTCGCTGAAGGAGGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGACCCAAACAACCCCGCCGCGAACTGGATCCACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 90 bp | CGAGCGTGGATCCAGTTCGCGGCGGGGTTGTTTGGGTCAAGTTGCTaGTGCTGCGGCTGCGAATGCTGCTTCTCCTCCTCCTTCAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RAWIQFAAGLFGSSC*CCGCECCFSSSFSE Trigger: TTCGCTGAAGGAGGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGACCCAAACAACCCCGCCGCGAACTGGATCCACGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | CGAGGTCCCGCGTGCTCCCTGAGGAAAGGGGGCTTTCGCAACTGGTGGGCAACCTGTCTCTCTGTTAGGTaGAGAATCCTGGCCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RGPACSLRKGGFRNWWATCLSVR*RILATS Trigger: CGAGGTGGCCAGGATTCTCAACCTAACAGAGAGACA...GGTTGCCCACCAGTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTGTCGCTCTGCCTTCATTCTTGGAATTGGGGCGCACTTGGCCCCTGTTTGCCGGGTCAGTCTCCTTaGGGGCATTTCTCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSLCLHSWNWGALGPCLPGQSP*GHFSLL Trigger: GAGCAAGGAGAAATGCCCCAAAGGAGACTGACCCGG...CAAACAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTGTCCGCACTGTTGTCGCTCTGCCTTCATTCTTGGAATTGGGGCGCACTTGAGCACTCAGTCCGTTaGGAGGAGGAGGATAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVSALLSLCLHSWNWGALEHSVR*EEEDKE Trigger: TTCCTTATCCTCCTCCTCCAAACGGACTGAGTGCTC...AAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAGTGCGGACACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | ACCAATGGAGCAGGAAAGAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTGCTCTGCCTTCATTCTaGGAATTGGGGCGCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TNGAGKRGSGIGRNPKATALPSF*ELGRTW Trigger: CCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGC...AGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTCTTTCCTGCTCCATTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | ACCAATGGAGCAGGAAAGAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTGCTCCCCAAGCCAGCTaGCACTCACAAAATATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TNGAGKRGSGIGRNPKATAPQAS*HSQNIA Trigger: TGCTATATTTTGTGAGTGCAAGCTGGCTTGGGGAGC...AGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTCTTTCCTGCTCCATTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | CAATGGAGCAGGAAAGAGAGGGAGTGGGATAGGGCGAAACCCCAAAGCCACTTGGCGTCTGGGCTCCATTaGATCAGGTCAGCATTTATT | + |
|
Preference number: 5 (lower is better) Translates to: QWSRKEREWDRAKPQSHLASGLH*IRSAFI Trigger: AATAAATGCTGACCTGATCAAATGGAGCCCAGACGC...CAAGTGGCTTTGGGGTTTCGCCCTATCCCACTCCCTCTCTTTCCTGCTCCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGGGCTCCCCAAGCCAGCTTGCACTCACAAAATATAGCATTTCTTAAGGAAGGGGTGTCCGCACTGTaGTCGCTCTGCCTTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ERAPQASLHSQNIAFLKEGVSAL*SLCLHS Trigger: AGAATGAAGGCAGAGCGACAACAGTGCGGACACCCC...TTCCTTAAGAAATGCTATATTTTGTGAGTGCAAGCTGGCTTGGGGAGCCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTTCCAACACGTAAACGAGCAAATACAGAGTCCCCCAAATACCTCAGAGACCCTTCATTCTTGGAATaGGGGCGCACTTGGCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFPTRKRANTESPKYLRDPSFLE*GRTWPL Trigger: CAGGGGCCAAGTGCGCCCCAATTCCAAGAATGAAGG...GTCTCTGAGGTATTTGGGGGACTCTGTATTTGCTCGTTTACGTGTTGGAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAAGAAGAAGTCCAAGTCGCTGGAGAGTTTCTGGAAATCAAGCACCAAACCACTGGAAGACATTTaGAGGCGTCCCGCACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KKKKKSKSLESFWKSSTKPLEDI*RRPALP Trigger: TGGGAGTGCGGGACGCCTCAAAATGTCTTCCAGTGG...TTTGGTGCTTGATTTCCAGAAACTCTCCAGCGACTTGGACTTCTTCTTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGCTGGAGAGTTTCTGGAAATCAAGCACCAAACACCCACAAAGGAAAACAGAAACCCCAAAGCCACTaGGTTTTTCCAACACGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRWRVSGNQAPNTHKGKQKPQSH*VFPTRK Trigger: TTTACGTGTTGGAAAAACCAAGTGGCTTTGGGGTTT...CTGTTTTCCTTTGTGGGTGTTTGGTGCTTGATTTCCAGAAACTCTCCAGCGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS TCA 72 bp | CAGCGAACAGCCTGGGATCGGGTGGTCGCTGCAAGCTaGGGGCTCCGACGAGCCGCCCGTCCCAGTCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRTAWDRVVAAS*GLRRAARPSRG Trigger: GCCGCGACTGGGACGGGCGGCTCGTCGGAGCCCTCAGCTTGCAGCGACCACCCGATCCCAGGCTGTTCGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 72 bp | CCTGCAGGAACGAGTTGCACGAGAACTCGGGGCCGCTaGTCCCCTGGGACTCCCGGGCCACGGAGCACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAGTSCTRTRGR*SPGTPGPRSTQ Trigger: CTGAGTGCTCCGTGGCCCGGGAGTCCCAGGGGAGCAGCGGCCCCGAGTTCTCGTGCAACTCGTTCCTGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 72 bp | CCGTCGCCGCTGCCGCCTTCTCCTGCAGGAACGAGTTaGACGAGAACTCGGGGCCGCTGCTCCCCTGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PSPLPPSPAGTS*TRTRGRCSPGT Trigger: AGTCCCAGGGGAGCAGCGGCCCCGAGTTCTCGTGCAACTCGTTCCTGCAGGAGAAGGCGGCAGCGGCGACGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 72 bp | CCTCCTTCAGCGAACAGCCTGGGATCGGGTGGTCGCTaGAAGCTGAGGGCTCCGACGAGCCGCCCGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PPSANSLGSGGR*KLRAPTSRPSQ Trigger: CTGGGACGGGCGGCTCGTCGGAGCCCTCAGCTTGCAGCGACCACCCGATCCCAGGCTGTTCGCTGAAGGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CCA 72 bp | GCACCGCGGACCACGAGGCAGAGAACACGGCCGATCTaGGGGCAAAACTACACGAGGCGAACTCGGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: APRTTRQRTRPI*GQNYTRRTRRR Trigger: CCGCCGCCGAGTTCGCCTCGTGTAGTTTTGCCCCCAGATCGGCCGTGTTCTCTGCCTCGTGGTCCGCGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CCA 72 bp | AACGAGTTGCACGAGAACTCGGGGCCGCTGCTCCCCTaGGACTCCCGGGCCACGGAGCACTCAGTCCGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: NELHENSGPLLP*DSRATEHSVRL Trigger: CAAACGGACTGAGTGCTCCGTGGCCCGGGAGTCCCAGGGGAGCAGCGGCCCCGAGTTCTCGTGCAACTCGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CCA 72 bp | TTCTCCTCCTCCTTCAGCGAACAGCCTGGGATCGGGTaGTCGCTGCAAGCTGAGGGCTCCGACGAGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSSSFSEQPGIG*SLQAEGSDEPP Trigger: GGGCGGCTCGTCGGAGCCCTCAGCTTGCAGCGACCACCCGATCCCAGGCTGTTCGCTGAAGGAGGAGGAGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CAA 90 bp | CCGCTGCTCCCCTGGGACTCCCGGGCCACGGAGCACTCAGTCCGTTaGGAGGAGGAGGATAAGGAAGTGGAGGAGGAGGAGGTGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLPWDSRATEHSVR*EEEDKEVEEEEVVE Trigger: CTCCACCACCTCCTCCTCCTCCACTTCCTTATCCTCCTCCTCCAAACGGACTGAGTGCTCCGTGGCCCGGGAGTCCCAGGGGAGCAGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CCA 72 bp | CCTGGGACTCCCGGGCCACGGAGCACTCAGTCCGTTTaGAGGAGGAGGATAAGGAAGTGGAGGAGGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGTPGPRSTQSV*RRRIRKWRRRR Trigger: CCTCCTCCTCCTCCACTTCCTTATCCTCCTCCTCCAAACGGACTGAGTGCTCCGTGGCCCGGGAGTCCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS CAA 72 bp | CCCTGGGACTCCCGGGCCACGGAGCACTCAGTCCGTTaGGAGGAGGAGGATAAGGAAGTGGAGGAGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PWDSRATEHSVR*EEEDKEVEEEE Trigger: CTCCTCCTCCTCCACTTCCTTATCCTCCTCCTCCAAACGGACTGAGTGCTCCGTGGCCCGGGAGTCCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 72 bp | CAGTTCGCGGCGGGGTTGTTTGGGTCAAGTTGCTGCTaGTGCGGCTGCGAATGCTGCTTCTCCTCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QFAAGLFGSSCC*CGCECCFSSSF Trigger: GAAGGAGGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGACCCAAACAACCCCGCCGCGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 72 bp | ATCCAGTTCGCGGCGGGGTTGTTTGGGTCAAGTTGCTaGTGCTGCGGCTGCGAATGCTGCTTCTCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IQFAAGLFGSSC*CCGCECCFSSS Trigger: GGAGGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGACCCAAACAACCCCGCCGCGAACTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 72 bp | TGGATCCAGTTCGCGGCGGGGTTGTTTGGGTCAAGTTaGTGCTGCTGCGGCTGCGAATGCTGCTTCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WIQFAAGLFGSS*CCCGCECCFSS Trigger: GGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGACCCAAACAACCCCGCCGCGAACTGGATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 72 bp | GCGGGGTTGTTTGGGTCAAGTTGCTGCTGCTGCGGCTaGGAATGCTGCTTCTCCTCCTCCTTCAGCGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: AGLFGSSCCCCG*ECCFSSSFSEQ Trigger: CTGTTCGCTGAAGGAGGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGACCCAAACAACCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||
| CDS GCA 72 bp | TTTGGGTCAAGTTGCTGCTGCTGCGGCTGCGAATGCTaGTTCTCCTCCTCCTTCAGCGAACAGCCTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FGSSCCCCGCEC*FSSSFSEQPGI Trigger: GATCCCAGGCTGTTCGCTGAAGGAGGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCAGCAACTTGACCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249499.8 |
||