RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HOXD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000128652

Ensembl transcript IDs: ENST00000249440.4, ENST00000410016.5, ENST00000432796.2, ENST00000459979.2, ENST00000683222.1

Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATaGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGGTCGC +
Preference number: 1 (lower is better)
Translates to: VALSNLQGRILAADL*RVTQRTPMEGRPGR
Trigger: GCGACCGGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CCA 90 bp GGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGACTTACCTTTaGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTG +
Preference number: 1 (lower is better)
Translates to: GPSAGRAADGSQTYL*DTITRLESLGPQYV
Trigger: CACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR TCA 90 bp GCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCC +
Preference number: 1 (lower is better)
Translates to: AVCGTVKFTGKDPCG*FMASHPKDAHGGEA
Trigger: GGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CCA 90 bp CCGCTGATGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTaGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGG +
Preference number: 1 (lower is better)
Translates to: PLMGLRLTFGTPLPD*SPLVRSMWHCQIYR
Trigger: CCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CCA 90 bp GTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTaGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCT +
Preference number: 1 (lower is better)
Translates to: VSDLPLGHHYQIGVP*SAVCGTVKFTGKDP
Trigger: AGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CCA 90 bp TTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTaGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTAT +
Preference number: 1 (lower is better)
Translates to: FGTPLPDWSPLVRSM*HCQIYREGSLRLIY
Trigger: ATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR TCA 90 bp CCAGACAATTTGAAATCAATAAACTGTGGTGAGGACTGTGGTTTTTaGGAAATGACCAAAGTGTGTTGTGCCACGCCACCGGGCTTCCTG +
Preference number: 1 (lower is better)
Translates to: PDNLKSINCGEDCGF*EMTKVCCATPPGFL
Trigger: CAGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTCATTTCTCAAAAACCACAGTCCTCACCACAGTTTATTGATTTCAAATTGTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CCA 90 bp CTTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCCTGCGCCTCCGCCGCTaGAGGCCTGAGACCCGGGAG +
Preference number: 2 (lower is better)
Translates to: LAADLWRVTQRTPMEGRPLRLRR*RPETRE
Trigger: CTCCCGGGTCTCAGGCCTCCAGCGGCGGAGGCGCAG...GGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR GCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCAGGGGGTTCCCGAACTaGCCCGCGGGCCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVRGFPN*PAGPTL
Trigger: GAGGGTGGGGCCCGCGGGGCAGTTCGGGAACCCCCT...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTACACCATTACCAGATTaGAGTCCCTTGGTCCGCAGT +
Preference number: 2 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAATPLPD*SPLVRS
Trigger: ACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGT...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCTTGCGGCTGATTTATaGCGAGTCACCCAAAGGACG +
Preference number: 2 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRALAADL*RVTQRT
Trigger: CGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CCA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCCTGCGCCTCCGCCGCTaGAGGCCTGAGACCCGGGAG +
Preference number: 2 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSLRLRR*RPETRE
Trigger: CTCCCGGGTCTCAGGCCTCCAGCGGCGGAGGCGCAG...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR GCA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCAGGGGGTTCCCGAACTaGCCCGCGGGCCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: VALSNLQGRILAADLWRVRGFPN*PAGPTL
Trigger: GAGGGTGGGGCCCGCGGGGCAGTTCGGGAACCCCCT...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR TCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGAAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCA +
Preference number: 2 (lower is better)
Translates to: GSQTYLWDTITRLESLGPKDPCG*FMASHP
Trigger: TGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTT...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR TCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCAAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCA +
Preference number: 2 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSKDPCG*FMASHP
Trigger: TGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTT...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CAA 90 bp GCCGCTGATGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATaGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAG +
Preference number: 2 (lower is better)
Translates to: AADGSQTYLWDTITR*ESLGPQYVALSNLQ
Trigger: CTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CAA 90 bp GGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTaGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCC +
Preference number: 2 (lower is better)
Translates to: GLRLTFGTPLPDWSP*VRSMWHCQIYREGS
Trigger: GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CCA 90 bp AGAAATGACCAAAGTGTGTTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATTTGGTCCGCAGTATGTaGCACTGTCAAATTTACAGG +
Preference number: 2 (lower is better)
Translates to: RNDQSVLCHATGLPDSTHLVRSM*HCQIYR
Trigger: CCTGTAAATTTGACAGTGCCACATACTGCGGACCAA...ATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CCA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCAGTGGCCCCCACGGCCTaGAAGCGAATTCCTAAGCTC +
Preference number: 2 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSVAPTA*KRIPKL
Trigger: GAGCTTAGGAATTCGCTTCCAGGCCGTGGGGGCCAC...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CCA 90 bp AGAAATGACCAAAGTGTGTTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATTCTCAGACTTACCTTTaGGACACCATTACCAGATTG +
Preference number: 2 (lower is better)
Translates to: RNDQSVLCHATGLPDSTHSQTYL*DTITRL
Trigger: CAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGA...ATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR GCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAAGATAGTTTAGTCCGATaGAATCCTTACGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKDSLVR*NPYGTG
Trigger: TCCTGTGCCGTAAGGATTGCATCGGACTAAACTATC...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CCA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCAATTCCTAAGCTCGGCTaGATAAATCTACAAATATAC +
Preference number: 2 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSIPKLG*INLQIY
Trigger: GTATATTTGTAGATTTATCCAGCCGAGCTTAGGAAT...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CAA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTCCAGATTGGAGTCCCTaGGTCCGCAGTATGTGGCAC +
Preference number: 3 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAAPDWSP*VRSMWH
Trigger: GTGCCACATACTGCGGACCAAGGGACTCCAATCTGG...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CAA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGAGCAAGAGAGGTAATTTaGCCGCGAGTTCGGGCTGGC +
Preference number: 3 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRAREVI*PRVRAG
Trigger: GCCAGCCCGAACTCGCGGCAAAATTACCTCTCTTGC...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CAA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGAGACACCATTACCAGATaGGAGTCCCTTGGTCCGCAG +
Preference number: 3 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRDTITR*ESLGPQ
Trigger: CTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTC...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CCA 72 bp GCAGGGCGCGCCGCTGATGGGTCTCAGACTTACCTTTaGGACACCATTACCAGATTGGAGTCCCTTGGTCCG +
Preference number: 3 (lower is better)
Translates to: AGRAADGSQTYL*DTITRLESLGP
Trigger: CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGGCGCGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CCA 72 bp TCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATaGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: SNLQGRILAADL*RVTQRTPMEGR
Trigger: CCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR TCA 72 bp GGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCAAAGGACGCCCATGGA +
Preference number: 3 (lower is better)
Translates to: GTVKFTGKDPCG*FMASHPKDAHG
Trigger: TCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CAA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCGCAAGAGAGGTAATTTaGCCGCGAGTTCGGGCTGGC +
Preference number: 3 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGAREVI*PRVRAG
Trigger: GCCAGCCCGAACTCGCGGCAAAATTACCTCTCTTGC...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR-3UTR CAA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCGACACCATTACCAGATaGGAGTCCCTTGGTCCGCAG +
Preference number: 3 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGDTITR*ESLGPQ
Trigger: CTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTC...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CCA 72 bp CCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTaGCACTGTCAAATTTACAGGGAAGGATCCTTGCGG +
Preference number: 3 (lower is better)
Translates to: PLPDWSPLVRSM*HCQIYREGSLR
Trigger: CCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CCA 72 bp GGTCTCAGACTTACCTTTGGGACACCATTACCAGATTaGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAA +
Preference number: 3 (lower is better)
Translates to: GLRLTFGTPLPD*SPLVRSMWHCQ
Trigger: TTGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CCA 72 bp TTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTaGTCCGCAGTATGTGGCACTGTCAAATTTACAGGG +
Preference number: 3 (lower is better)
Translates to: LPLGHHYQIGVP*SAVCGTVKFTG
Trigger: CCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR TCA 72 bp TTGAAATCAATAAACTGTGGTGAGGACTGTGGTTTTTaGGAAATGACCAAAGTGTGTTGTGCCACGCCACCG +
Preference number: 3 (lower is better)
Translates to: LKSINCGEDCGF*EMTKVCCATPP
Trigger: CGGTGGCGTGGCACAACACACTTTGGTCATTTCTCAAAAACCACAGTCCTCACCACAGTTTATTGATTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTCTGCGCCTCCGCCGCTaGAGGCCTGAGACCCGGGAG +
Preference number: 4 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAALRLRR*RPETRE
Trigger: CTCCCGGGTCTCAGGCCTCCAGCGGCGGAGGCGCAG...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTCGGACGCGGGCGCCATaGACTCGACGAAGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAARTRAP*TRRSCR
Trigger: GCGGCAACTTCGTCGAGTCCATGGCGCCCGCGTCCG...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGAGAGGTGGCCCAGGTTaGAGACAGGCCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRARGGPG*RQARTR
Trigger: CCGCGTCCGGGCCTGTCTTCAACCTGGGCCACCTCT...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGAAGCCGCCGCCGTTaGTCGCCATGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRARSRRR*SPWDGA
Trigger: AGCCCCATCCCATGGCGAGCAACGGCGGCGGCTTCG...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTCTTGGATGCTGGGCCTaGCGGGCTCTTGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAALGCWA*RALVLA
Trigger: TGCGAGGACAAGAGCCCGCCAGGCCCAGCATCCAAG...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTCCCCCAGGCTCCAGGTaGCCTGGATCCCAATTTATC +
Preference number: 4 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAAPPGSR*PGSQFI
Trigger: GATAAATTGGGATCCAGGTCACCTGGAGCCTGGGGG...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS-3UTR GCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGTGGCTAGCCGGCGAGTaGAGGATGCCCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRAWLAGE*RMPLAF
Trigger: GAAGGCCAAGGGCATCCTGCACTCGCCGGCTAGCCA...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGGGCGGCCGCTACAGATaGGTCAGTTTGGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRAGGRYR*VSLGAS
Trigger: GGAGGCTCCCAAACTGACGCATCTGTAGCGGCCGCC...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGACCGTGCGTACCCGCTTaGATGCTGGGCCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRPCVPA*MLGLAG
Trigger: GCCCGCCAGGCCCAGCATCCAAGCGGGTACGCACGG...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp CTTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCCCTGGCTGTTCCCAGTaGCCGGCCGCATGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LAADLWRVTQRTPMEGRPPGCSQ*PAACSC
Trigger: GCAGCTGCATGCGGCCGGGCACTGGGAACAGCCAGG...GGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGAGGGCAGGGTCGGTGGTaGAGGAGGGGGTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRGQGRW*RRGLWW
Trigger: CCACCACAACCCCCTCCTCCACCACCGACCCTGCCC...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTAAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAAKDPCG*FMASHP
Trigger: TGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTT...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTATCCAGGGGAAGATCTaGTTGCTGATGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAAIQGKI*LLMVAE
Trigger: CTCAGCCACCATCAGCAAGCAGATCTTCCCCTGGAT...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGGCGTACCCGCTTGGATaGTGGGCCTGGCGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LRLIYGESPKGRPWRGGPAYPLG*WAWRAL
Trigger: AAGAGCCCGCCAGGCCCAGCATCCAAGCGGGTACGC...CGGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTAGCTCTCTCCTGCAGTaGCACAGCTGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAASSLLQ*HSCSSA
Trigger: AGCAGAAGAACAGCTGTGCCACTGCAGGAGAGAGCT...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTAGTGCAGGATGCCCTTaGCCTTCTGGTCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAASAGCP*PSGPSC
Trigger: ACAAGAAGGACCAGAAGGCCAAGGGCATCCTGCACT...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGATGGTGGTGGTTGCCTaGAATCTGCGCGGCGCAACT +
Preference number: 4 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRAMVVVA*NLRGAT
Trigger: AGTTGCGCCGCGCAGATTCCAGGCAACCACCACCAT...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGACAGATGCGTCAGTTTaGGAGCCTCCGGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRATDASV*EPPAVV
Trigger: GACGACTGCCGGAGGCTCCCAAACTGACGCATCTGT...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp CTTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCCAGAGTGGGCGCCAGTaGGGGGCAGAGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LAADLWRVTQRTPMEGRPQSGRQ*GAELAF
Trigger: GAAGGCTAGCTCTGCCCCCCACTGGCGCCCACTCTG...GGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS-3UTR GCA 90 bp CTTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCCCGGCGAGTGCAGGATaGCCTTGGCCTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LAADLWRVTQRTPMEGRPPASAG*PWPSGP
Trigger: AGGACCAGAAGGCCAAGGGCATCCTGCACTCGCCGG...GGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGATGGCTAGCCGGCGAGTaGAGGATGCCCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRWLAGE*RMPLAF
Trigger: GAAGGCCAAGGGCATCCTGCACTCGCCGGCTAGCCA...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCAGGGCGCGCCGCTGATGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATGGGGGCAGGGTCGGTaGTGGAGGAGGGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: AGRAADGSQTYLWDTITRWGQGR*WRRGLW
Trigger: CCACAACCCCCTCCTCCACCACCGACCCTGCCCCCA...TCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGGCGCGCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTCCAGGCCGTACATATTaGGCTGTGATTTGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAAPGRTY*AVIWRK
Trigger: CTTTCGCCAAATCACAGCCCAATATGTACGGCCTGG...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGCGCTCGTGTATGCCGTaGGTACCCGCTTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LRLIYGESPKGRPWRGGPRSCMP*VPAWML
Trigger: CAGCATCCAAGCGGGTACGCACGGCATACACGAGCG...CGGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp CTTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCCTCGAACTCCGGCGCTaGGTAGCGCTTCTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LAADLWRVTQRTPMEGRPLELRR*VALLLW
Trigger: CCACAACAGAAGCGCTACGCAGCGCCGGAGTTCGAG...GGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp AGAAATGACCAAAGTGTGTTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATAGGGGGTTCCCGAACTaGCCCGCGGGCCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: RNDQSVLCHATGLPDSTHRGFPN*PAGPTL
Trigger: GAGGGTGGGGCCCGCGGGGCAGTTCGGGAACCCCCT...ATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTCATTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCCTGCGCTCAGGGGACTaGCTAGCCGGCGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVLRSGD*LAGECR
Trigger: CCTGCACTCGCCGGCTAGCCAGTCCCCTGAGCGCAG...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGAACTGTAGTCCACGCTaGCCGACGACGGGTGCGAGA +
Preference number: 4 (lower is better)
Translates to: LRLIYGESPKGRPWRGGPNCSPR*PTTGAR
Trigger: TCTCGCACCCGTCGTCGGCCAGCGTGGACTACAGTT...CGGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCGGGGGACTAAGGAGGTaGAATGTGGCCCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVGGLRR*NVAPTA
Trigger: GGCCGTGGGGGCCACATTTCACCTCCTTAGTCCCCC...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GCAGGGCGCGCCGCTGATGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATACACCGGGCTGCCCTaGAAGTTGGCGCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: AGRAADGSQTYLWDTITRYTGLP*KLALAK
Trigger: CTTCGCCAGCGCCAACTTGCAGGGCAGCCCGGTGTA...TCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGGCGCGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GCAGGGCGCGCCGCTGATGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATGGACTCGACGAAGTTaGCGCCCACGTACACCGGGC +
Preference number: 4 (lower is better)
Translates to: AGRAADGSQTYLWDTITRWTRRS*RPRTPG
Trigger: GCCCGGTGTACGTGGGCGGCAACTTCGTCGAGTCCA...TCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGGCGCGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGAGGGGGTTCCCGAACTaGCCCGCGGGCCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: LVRSMWHCQIYREGSLRLRGFPN*PAGPTL
Trigger: GAGGGTGGGGCCCGCGGGGCAGTTCGGGAACCCCCT...CAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGAGACCAAAGTGTGTTGTaGCACGCCACCGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRDQSVL*HATGLP
Trigger: AGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTC...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCCGTGCGTACCCGCTTaGATGCTGGGCCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPPCVPA*MLGLAG
Trigger: GCCCGCCAGGCCCAGCATCCAAGCGGGTACGCACGG...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCCAGGCCGTACATATTaGGCTGTGATTTGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRAPGRTY*AVIWRK
Trigger: CTTTCGCCAAATCACAGCCCAATATGTACGGCCTGG...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGGTAGCGCTTCTGTTGTaGCAGGCAGCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LRLIYGESPKGRPWRGGPVALLL*QAAAEW
Trigger: CCACTCAGCAGCTGCCTGCCACAACAGAAGCGCTAC...CGGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCCGCCGTTGCTCGCCATaGGATGGGGCTCGAACTCCG +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVRRCSP*DGARTP
Trigger: CGGAGTTCGAGCCCCATCCCATGGCGAGCAACGGCG...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGCTTGCTGATGGTGGCTaGGGAGCTAGAAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: LRLIYGESPKGRPWRGGPLADGG*GARSIG
Trigger: CCCAATGCTTCTAGCTCCTCAGCCACCATCAGCAAG...CGGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGACTCGCAGCTCTCTCCTaGAGTGGCACAGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRLAALS*SGTAVL
Trigger: AAGAACAGCTGTGCCACTGCAGGAGAGAGCTGCGAG...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCTACACCGGGCTGCCCTaGAAGTTGGCGCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVYTGLP*KLALAK
Trigger: CTTCGCCAGCGCCAACTTGCAGGGCAGCCCGGTGTA...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCTGGCCGACGACGGGTaGGAGAGGTGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPLADDG*ERWPRL
Trigger: CAACCTGGGCCACCTCTCGCACCCGTCGTCGGCCAG...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCGGCGGCCGCTACAGATaGGTCAGTTTGGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVGGRYR*VSLGAS
Trigger: GGAGGCTCCCAAACTGACGCATCTGTAGCGGCCGCC...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGGCCTCCAAACAGTCCTaGGTTTTCATAGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRAASKQS*VFIVSS
Trigger: GCTGCTTACTATGAAAACCCAGGACTGTTTGGAGGC...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGTGGGGGCAGGGTCGGTaGTGGAGGAGGGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPWGQGR*WRRGLW
Trigger: CCACAACCCCCTCCTCCACCACCGACCCTGCCCCCA...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGGCTGCCCTGCAAGTTaGCGCTGGCGAAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSGCPAS*RWRSRR
Trigger: GCGGCGGCTTCGCCAGCGCCAACTTGCAGGGCAGCC...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCGGACGCGGGCGCCATaGACTCGACGAAGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPRTRAP*TRRSCR
Trigger: GCGGCAACTTCGTCGAGTCCATGGCGCCCGCGTCCG...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCGACGGGTGCGAGAGGTaGCCCAGGTTGAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVDGCER*PRLKTG
Trigger: GCCTGTCTTCAACCTGGGCCACCTCTCGCACCCGTC...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCGCCGCGAGTTCGGGCTaGCGGCGGCCGCTACAGATG +
Preference number: 4 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSAASSG*RRPLQM
Trigger: CATCTGTAGCGGCCGCCGCCAGCCCGAACTCGCGGC...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCCGCGAGTTCGGGCTaGCGGCGGCCGCTACAGATG +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSAASSG*RRPLQM
Trigger: CATCTGTAGCGGCCGCCGCCAGCCCGAACTCGCGGC...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGAAGCTCCAGGGCCTGCTaGCCCTGCTCAAATAACATT +
Preference number: 4 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRSSRAC*PCSNNI
Trigger: AATGTTATTTGAGCAGGGTCAGCAGGCCCTGGAGCT...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGATCCAGGGGAAGATCTaGTTGCTGATGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LRLIYGESPKGRPWRGGPIQGKI*LLMVAE
Trigger: CTCAGCCACCATCAGCAAGCAGATCTTCCCCTGGAT...CGGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGCTGGCCGACGACGGGTaGGAGAGGTGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LTFGTPLPDWSPLVRSMWLADDG*ERWPRL
Trigger: CAACCTGGGCCACCTCTCGCACCCGTCGTCGGCCAG...CCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCAGCTCCTTTGTGGGCTaGGGCTCTCAGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVSSFVG*GSQRGR
Trigger: TCTGCCCCTCTGAGAGCCCCAGCCCACAAAGGAGCT...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AGAAATGACCAAAGTGTGTTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATTTCAGACCAGGAGGCTaGCTGCCACCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: RNDQSVLCHATGLPDSTHFRPGG*LPPPPP
Trigger: GGGTGGGGGTGGTGGCAGCCAGCCTCCTGGTCTGAA...ATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTCATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGAAGCTCTCTCCTGCAGTaGCACAGCTGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRSSLLQ*HSCSSA
Trigger: AGCAGAAGAACAGCTGTGCCACTGCAGGAGAGAGCT...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGCTGCGCTCAGGGGACTaGCTAGCCGGCGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LVRSMWHCQIYREGSLRLLRSGD*LAGECR
Trigger: CCTGCACTCGCCGGCTAGCCAGTCCCCTGAGCGCAG...CAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCCAGGCAGCTGCTGAGTaGCGCCGTGTAGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSQAAAE*RRVGGQ
Trigger: CTGGCCGCCTACACGGCGCCACTCAGCAGCTGCCTG...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCCAGGCAGCTGCTGAGTaGCGCCGTGTAGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSQAAAE*RRVGGQ
Trigger: CTGGCCGCCTACACGGCGCCACTCAGCAGCTGCCTG...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCAACTGTAGTCCACGCTaGCCGACGACGGGTGCGAGA +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVNCSPR*PTTGAR
Trigger: TCTCGCACCCGTCGTCGGCCAGCGTGGACTACAGTT...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCCTGCGCCTCCGCCGCTaGAGGCCTGAGACCCGGGAG +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGLRLRR*RPETRE
Trigger: CTCCCGGGTCTCAGGCCTCCAGCGGCGGAGGCGCAG...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GCAGGGCGCGCCGCTGATGGGTCTCAGACTTACCTTTGGGACACCATTACCAGAACCTCCAATGTCTGCTaGATCCTGAGAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGRAADGSQTYLWDTITRTSNVC*ILRELG
Trigger: GCCCAGCTCTCTCAGGATTCAGCAGACATTGGAGGT...TCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGGCGCGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTAGAGGTGGCCCAGGTTaGAGACAGGCCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCRGGPG*RQARTR
Trigger: CCGCGTCCGGGCCTGTCTTCAACCTGGGCCACCTCT...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGCACTGTATCCTTCACTaGCACCTCCAATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRLIYGESPKGRPWRGGPHCILH*HLQCLL
Trigger: CAGCAGACATTGGAGGTGGCAGTGAAGGATACAGTG...CGGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTCCTGGCTGTTCCCAGTaGCCGGCCGCATGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCPGCSQ*PAACSC
Trigger: GCAGCTGCATGCGGCCGGGCACTGGGAACAGCCAGG...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGGCGTACCCGCTTGGATaGTGGGCCTGGCGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LTFGTPLPDWSPLVRSMWAYPLG*WAWRAL
Trigger: AAGAGCCCGCCAGGCCCAGCATCCAAGCGGGTACGC...CCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCCGAAGCCGCCGCCGTTaGTCGCCATGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: VALSNLQGRILAADLWRVRSRRR*SPWDGA
Trigger: AGCCCCATCCCATGGCGAGCAACGGCGGCGGCTTCG...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGCCACGTACACCGGGCTaGCCTGCAAGTTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LVRSMWHCQIYREGSLRLPRTPG*PASWRW
Trigger: CCAGCGCCAACTTGCAGGGCAGCCCGGTGTACGTGG...CAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp AGAAATGACCAAAGTGTGTTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGTCCATGGTGGTGGTTaGCTGGAATCTGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RNDQSVLCHATGLPDSTHVHGGG*LESARR
Trigger: GCGCCGCGCAGATTCCAGGCAACCACCACCATGGAC...ATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCCAGTGTCCAGGGAGCTaGCAGCAGCAGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSQCPGS*QQQGVG
Trigger: ACCCACCCCCTGCTGCTGCCAGCTCCCTGGACACTG...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGTTCAGACCAGGAGGCTaGCTGCCACCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LTFGTPLPDWSPLVRSMWFRPGG*LPPPPP
Trigger: GGGTGGGGGTGGTGGCAGCCAGCCTCCTGGTCTGAA...CCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGGCAGGGTCGGTGGTaGAGGAGGGGGTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCGQGRW*RRGLWW
Trigger: CCACCACAACCCCCTCCTCCACCACCGACCCTGCCC...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCCTCCACCTCCAGGATTaGTGGGTGAAGATGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVLHLQD*WVKMGA
Trigger: TGCCCCCATCTTCACCCACCAATCCTGGAGGTGGAG...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCCCCCACGGCCTGGAAGCGAATTCCTAAGCTCGGCTGGATAAATCTACAAATACGCCGTTGCTCGCCATaGGATGGGGCTCGAACTCCG +
Preference number: 4 (lower is better)
Translates to: APTAWKRIPKLGWINLQIRRCSP*DGARTP
Trigger: CGGAGTTCGAGCCCCATCCCATGGCGAGCAACGGCG...TATTTGTAGATTTATCCAGCCGAGCTTAGGAATTCGCTTCCAGGCCGTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCCCTGCAAGTTGGCGCTaGCGAAGCCGCCGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: VALSNLQGRILAADLWRVPASWR*RSRRRC
Trigger: GCAACGGCGGCGGCTTCGCCAGCGCCAACTTGCAGG...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTCCAGGATTGGTGGGTaGAGATGGGGGCAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSSRIGG*RWGQGR
Trigger: CCGACCCTGCCCCCATCTTCACCCACCAATCCTGGA...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCTCCGGCAGTCGTCCCTaGGACGAGTGGTGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGSGSRP*DEWWAE
Trigger: CTCGGCCCACCACTCGTCTCAGGGACGACTGCCGGA...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGGGGACTAAGGAGGTaGAATGTGGCCCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCGGLRR*NVAPTA
Trigger: GGCCGTGGGGGCCACATTTCACCTCCTTAGTCCCCC...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GCTAGACGCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGATCAATAAACTGTGGTaGGGACTGTGGTTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: ARRGPGPRLSKLWSLCRAINKLW*GLWFLR
Trigger: TCTCAAAAACCACAGTCCTCACCACAGTTTATTGAT...CGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGCGTCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCCCACGTACACCGGGCTaGCCTGCAAGTTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VALSNLQGRILAADLWRVPRTPG*PASWRW
Trigger: CCAGCGCCAACTTGCAGGGCAGCCCGGTGTACGTGG...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTGGACTCGACGAAGTTaGCGCCCACGTACACCGGGC +
Preference number: 4 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSWTRRS*RPRTPG
Trigger: GCCCGGTGTACGTGGGCGGCAACTTCGTCGAGTCCA...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGGCCTCCAAACAGTCCTaGGTTTTCATAGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRLIYGESPKGRPWRGGPASKQS*VFIVSS
Trigger: GCTGCTTACTATGAAAACCCAGGACTGTTTGGAGGC...CGGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCCTTGGATGCTGGGCCTaGCGGGCTCTTGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSLGCWA*RALVLA
Trigger: TGCGAGGACAAGAGCCCGCCAGGCCCAGCATCCAAG...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCCCCCACGGCCTGGAAGCGAATTCCTAAGCTCGGCTGGATAAATCTACAAATATACCCGCTTGGATGCTaGGCCTGGCGGGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: APTAWKRIPKLGWINLQIYPLGC*AWRALV
Trigger: GACAAGAGCCCGCCAGGCCCAGCATCCAAGCGGGTA...TATTTGTAGATTTATCCAGCCGAGCTTAGGAATTCGCTTCCAGGCCGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGTACCCGCTTGGATGCTaGGCCTGGCGGGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LVRSMWHCQIYREGSLRLYPLGC*AWRALV
Trigger: GACAAGAGCCCGCCAGGCCCAGCATCCAAGCGGGTA...CAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCTATTGGGCTGTGATTTaGCGAAAGCAGGCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVYWAVI*RKQAAR
Trigger: CCTCGCCGCCTGCTTTCGCCAAATCACAGCCCAATA...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAAGACCAGGAGGCTGGCTaGCACCACCCCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKDQEAG*HHPHPG
Trigger: GCCAGGGTGGGGGTGGTGGCAGCCAGCCTCCTGGTC...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCCCGGCGAGTGCAGGATaGCCTTGGCCTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VALSNLQGRILAADLWRVPASAG*PWPSGP
Trigger: AGGACCAGAAGGCCAAGGGCATCCTGCACTCGCCGG...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCCTCGAACTCCGGCGCTaGGTAGCGCTTCTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSLELRR*VALLLW
Trigger: CCACAACAGAAGCGCTACGCAGCGCCGGAGTTCGAG...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCTCCACCTCCAGGATTaGTGGGTGAAGATGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPLHLQD*WVKMGA
Trigger: TGCCCCCATCTTCACCCACCAATCCTGGAGGTGGAG...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCAGTGCAGGATGCCCTTaGCCTTCTGGTCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVSAGCP*PSGPSC
Trigger: ACAAGAAGGACCAGAAGGCCAAGGGCATCCTGCACT...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTTTGCTCGCCATGGGATaGGGCTCGAACTCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCLLAMG*GSNSGA
Trigger: AGCGCCGGAGTTCGAGCCCCATCCCATGGCGAGCAA...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAAGGCTGCCCTGCAAGTTaGCGCTGGCGAAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKGCPAS*RWRSRR
Trigger: GCGGCGGCTTCGCCAGCGCCAACTTGCAGGGCAGCC...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AGAAATGACCAAAGTGTGTTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGGGTCGCAAGGTCCATaGTGGTGGTTGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: RNDQSVLCHATGLPDSTHGSQGP*WWLPGI
Trigger: GATTCCAGGCAACCACCACCATGGACCTTGCGACCC...ATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGACAGATGCGTCAGTTTaGGAGCCTCCGGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPTDASV*EPPAVV
Trigger: GACGACTGCCGGAGGCTCCCAAACTGACGCATCTGT...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCCAGATTGGAGTCCCTTaGTCCGCAGTATGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVQIGVP*SAVCGT
Trigger: AGTGCCACATACTGCGGACCAAGGGACTCCAATCTG...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGTGGCCCCCACGGCCTaGAAGCGAATTCCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSVAPTA*KRIPKL
Trigger: GAGCTTAGGAATTCGCTTCCAGGCCGTGGGGGCCAC...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCACACTGTCCCAACCCTaGTCTTGCGCGCTCGCAGAC +
Preference number: 4 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSTLSQP*SCALAD
Trigger: GTCTGCGAGCGCGCAAGACCAGGGTTGGGACAGTGT...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS-3UTR GCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCGTCCATGGTGGTGGTTaGCTGGAATCTGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGVHGGG*LESARR
Trigger: GCGCCGCGCAGATTCCAGGCAACCACCACCATGGAC...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGACCAAAGTGTGTTGTaGCACGCCACCGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSDQSVL*HATGLP
Trigger: AGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTC...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AGAAATGACCAAAGTGTGTTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATTATTGGGCTGTGATTTaGCGAAAGCAGGCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RNDQSVLCHATGLPDSTHYWAVI*RKQAAR
Trigger: CCTCGCCGCCTGCTTTCGCCAAATCACAGCCCAATA...ATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCTTGCTCGCCATGGGATaGGGCTCGAACTCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGLLAMG*GSNSGA
Trigger: AGCGCCGGAGTTCGAGCCCCATCCCATGGCGAGCAA...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGTGGCCCCCACGGCCTaGAAGCGAATTCCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCVAPTA*KRIPKL
Trigger: GAGCTTAGGAATTCGCTTCCAGGCCGTGGGGGCCAC...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCCCCCAGGCTCCAGGTaGCCACAATTATGTATGTGT +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPPPGSR*PQLCMC
Trigger: ACACATACATAATTGTGGTCACCTGGAGCCTGGGGG...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249440.4
CDS-3UTR TCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCATGCAGCTGCCATTaGGTTCAGCTCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSACSCH*VQLLCG
Trigger: CCCACAAAGGAGCTGAACTCAATGGCAGCTGCATGC...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCATCCGGCAGTCGTCCCTaGGACGAGTGGTGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSSGSRP*DEWWAE
Trigger: CTCGGCCCACCACTCGTCTCAGGGACGACTGCCGGA...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp AGAAATGACCAAAGTGTGTTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATAAGGATCCTTGCGGCTaGTTTATGGCGAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RNDQSVLCHATGLPDSTHKDPCG*FMASHP
Trigger: TGGGTGACTCGCCATAAATCAGCCGCAAGGATCCTT...ATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAACACACTTTGGTCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCGGTTGTGGTGGCTGCTaGTCTGAGTTCAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSGCGGC*SEFRPG
Trigger: TCCTGGTCTGAACTCAGAGCAGCAGCCACCACAACC...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATCCCAACCCTGGTCTTaGGCGCTCGCAGACACGGCC +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKSQPWS*ALADTA
Trigger: GGCCGTGTCTGCGAGCGCGCAAGACCAGGGTTGGGA...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS-3UTR CCA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCGGAGCAGGCAGAACCTaGATAGTCAGTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSGAGRT*IVSVQG
Trigger: TCCCTGGACACTGACTATCCAGGTTCTGCCTGCTCC...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCAGCTCCTTTGTGGGCTaGGGCTCTCAGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGSSFVG*GSQRGR
Trigger: TCTGCCCCTCTGAGAGCCCCAGCCCACAAAGGAGCT...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGTAGCGCTTCTGTTGTaGCAGGCAGCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCVALLL*QAAAEW
Trigger: CCACTCAGCAGCTGCCTGCCACAACAGAAGCGCTAC...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCACCTGCAAGTTGGCGCTaGCGAAGCCGCCGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSPASWR*RSRRRC
Trigger: GCAACGGCGGCGGCTTCGCCAGCGCCAACTTGCAGG...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTCAAGGTCCATGGTGGTaGTTGCCTGGAATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCQGPWW*LPGICA
Trigger: CGCGCAGATTCCAGGCAACCACCACCATGGACCTTG...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGGTCGCAAGGTCCATaGTGGTGGTTGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCGSQGP*WWLPGI
Trigger: GATTCCAGGCAACCACCACCATGGACCTTGCGACCC...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CAA 72 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATaGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITR*ESLGPQYVALS
Trigger: TGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCACCTCCAATGTCTGCTaGATCCTGAGAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VALSNLQGRILAADLWRVTSNVC*ILRELG
Trigger: GCCCAGCTCTCTCAGGATTCAGCAGACATTGGAGGT...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGCATGCAGCTGCCATTaGGTTCAGCTCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCACSCH*VQLLCG
Trigger: CCCACAAAGGAGCTGAACTCAATGGCAGCTGCATGC...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GCCCCCACGGCCTGGAAGCGAATTCCTAAGCTCGGCTGGATAAATCTACAAATAGTACATATTGGGCTGTaGTTTGGCGAAAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: APTAWKRIPKLGWINLQIVHIGL*FGESRR
Trigger: CCGCCTGCTTTCGCCAAATCACAGCCCAATATGTAC...TATTTGTAGATTTATCCAGCCGAGCTTAGGAATTCGCTTCCAGGCCGTGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCGATAGTTTAGTCCGATaGAATCCTTACGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVDSLVR*NPYGTG
Trigger: TCCTGTGCCGTAAGGATTGCATCGGACTAAACTATC...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCCATTGGGCCCACCTTTaGGCTTCTTGGCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGHWAHL*ASWQAL
Trigger: GAGTGCCTGCCAAGAAGCCCAAAGGTGGGCCCAATG...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAAGACGGGTGCGAGAGGTaGCCCAGGTTGAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKDGCER*PRLKTG
Trigger: GCCTGTCTTCAACCTGGGCCACCTCTCGCACCCGTC...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCCAAGGTCCATGGTGGTaGTTGCCTGGAATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGQGPWW*LPGICA
Trigger: CGCGCAGATTCCAGGCAACCACCACCATGGACCTTG...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGCTTGCGGCTGATTTATaGCGAGTCACCCAAAGGACG +
Preference number: 4 (lower is better)
Translates to: LTFGTPLPDWSPLVRSMWLAADL*RVTQRT
Trigger: CGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG...CCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCTTGGTCCGCAGTATGTaGCACTGTCAAATTTACAGG +
Preference number: 4 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVLVRSM*HCQIYR
Trigger: CCTGTAAATTTGACAGTGCCACATACTGCGGACCAA...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGCAGATTGGAGTCCCTTaGTCCGCAGTATGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LTFGTPLPDWSPLVRSMWQIGVP*SAVCGT
Trigger: AGTGCCACATACTGCGGACCAAGGGACTCCAATCTG...CCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGACACCATTACCAGATTaGAGTCCCTTGGTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPTPLPD*SPLVRS
Trigger: ACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGT...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCAGCTCCAGGGCCTGCTaGCCCTGCTCAAATAACATT +
Preference number: 4 (lower is better)
Translates to: VALSNLQGRILAADLWRVSSRAC*PCSNNI
Trigger: AATGTTATTTGAGCAGGGTCAGCAGGCCCTGGAGCT...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCATCCAGGATTGGTGGGTaGAGATGGGGGCAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSSRIGG*RWGQGR
Trigger: CCGACCCTGCCCCCATCTTCACCCACCAATCCTGGA...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGGGCACAAGTAGCGGTTaGAGTGGAATTCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPGTSSG*SGIPFP
Trigger: TGGAAAAGGAATTCCACTTCAACCGCTACTTGTGCC...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCGGAGCAGGCAGAACCTaGATAGTCAGTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGGAGRT*IVSVQG
Trigger: TCCCTGGACACTGACTATCCAGGTTCTGCCTGCTCC...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GCCCCCACGGCCTGGAAGCGAATTCCTAAGCTCGGCTGGATAAATCTACAAATAACACCATTACCAGATTaGAGTCCCTTGGTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: APTAWKRIPKLGWINLQITPLPD*SPLVRS
Trigger: ACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGT...TATTTGTAGATTTATCCAGCCGAGCTTAGGAATTCGCTTCCAGGCCGTGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp CTTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCATTCCTAAGCTCGGCTaGATAAATCTACAAATATAC +
Preference number: 4 (lower is better)
Translates to: LAADLWRVTQRTPMEGRPIPKLG*INLQIY
Trigger: GTATATTTGTAGATTTATCCAGCCGAGCTTAGGAAT...GGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCACGCTCGTGTATGCCGTaGGTACCCGCTTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSRSCMP*VPAWML
Trigger: CAGCATCCAAGCGGGTACGCACGGCATACACGAGCG...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAACATTGGGCCCACCTTTaGGCTTCTTGGCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKHWAHL*ASWQAL
Trigger: GAGTGCCTGCCAAGAAGCCCAAAGGTGGGCCCAATG...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAACTTGCTGATGGTGGCTaGGGAGCTAGAAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKLADGG*GARSIG
Trigger: CCCAATGCTTCTAGCTCCTCAGCCACCATCAGCAAG...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCCACTGTATCCTTCACTaGCACCTCCAATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGHCILH*HLQCLL
Trigger: CAGCAGACATTGGAGGTGGCAGTGAAGGATACAGTG...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCGATAGTTTAGTCCGATaGAATCCTTACGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSDSLVR*NPYGTG
Trigger: TCCTGTGCCGTAAGGATTGCATCGGACTAAACTATC...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCAATGGTGGTGGTTGCCTaGAATCTGCGCGGCGCAACT +
Preference number: 4 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSMVVVA*NLRGAT
Trigger: AGTTGCGCCGCGCAGATTCCAGGCAACCACCACCAT...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGTCTCAGACTTACCTTTaGGACACCATTACCAGATTG +
Preference number: 4 (lower is better)
Translates to: GSQTYLWDTITRLESLGPSQTYL*DTITRL
Trigger: CAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGA...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
3UTR CAA 72 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTaGGTCCGCAGTATGTGGCACTGTCAAATTTACAGG +
Preference number: 4 (lower is better)
Translates to: LTFGTPLPDWSP*VRSMWHCQIYR
Trigger: CCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAAGTACATATTGGGCTGTaGTTTGGCGAAAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKVHIGL*FGESRR
Trigger: CCGCCTGCTTTCGCCAAATCACAGCCCAATATGTAC...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGAGGACTGTGGTTTTTaGGAAATGACCAAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSEDCGF*EMTKVC
Trigger: ACACACTTTGGTCATTTCTCAAAAACCACAGTCCTC...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCAGGTTGTGGTGGCTGCTaGTCTGAGTTCAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSGCGGC*SEFRPG
Trigger: TCCTGGTCTGAACTCAGAGCAGCAGCCACCACAACC...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR GCA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCACTCGCAGCTCTCTCCTaGAGTGGCACAGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSLAALS*SGTAVL
Trigger: AAGAACAGCTGTGCCACTGCAGGAGAGAGCTGCGAG...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAACTTGCGGCTGATTTATaGCGAGTCACCCAAAGGACG +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKLAADL*RVTQRT
Trigger: CGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGAGGACTGTGGTTTTTaGGAAATGACCAAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCEDCGF*EMTKVC
Trigger: ACACACTTTGGTCATTTCTCAAAAACCACAGTCCTC...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCTTGGTCCGCAGTATGTaGCACTGTCAAATTTACAGG +
Preference number: 4 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGLVRSM*HCQIYR
Trigger: CCTGTAAATTTGACAGTGCCACATACTGCGGACCAA...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAAGGCACAAGTAGCGGTTaGAGTGGAATTCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKGTSSG*SGIPFP
Trigger: TGGAAAAGGAATTCCACTTCAACCGCTACTTGTGCC...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CCA 90 bp TTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTCCTAAGCTCGGCTaGATAAATCTACAAATATAC +
Preference number: 4 (lower is better)
Translates to: LVRSMWHCQIYREGSLRLIPKLG*INLQIY
Trigger: GTATATTTGTAGATTTATCCAGCCGAGCTTAGGAAT...CAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR TCA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAAATCAATAAACTGTGGTaGGGACTGTGGTTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKINKLW*GLWFLR
Trigger: TCTCAAAAACCACAGTCCTCACCACAGTTTATTGAT...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS GCA 90 bp GCCGCGCCAGAACCGCGCGGCTGCAGTCACCTCGAGCAGGCCGGCTaGTCCTGGCAGGCGGTGTCGGCGCCGGCGGGGGACTCGGCGCCC +
Preference number: 5 (lower is better)
Translates to: AAPEPRGCSHLEQAG*SWQAVSAPAGDSAP
Trigger: GGGCGCCGAGTCCCCCGCCGGCGCCGACACCGCCTGCCAGGAGCAGCCGGCCTGCTCGAGGTGACTGCAGCCGCGCGGTTCTGGCGCGGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 90 bp CCCTTCCAGGCCCTCCCTCGCCGGGCTCCCCACCAGCTCCGGAGGTaGCGGCGATGCGGACCGAGTGAGCGGCGGTGGGGCCAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: PFQALPRRAPHQLRR*RRCGPSERRWGQAG
Trigger: CCCGGCCTGGCCCCACCGCCGCTCACTCGGTCCGCATCGCCGCCACCTCCGGAGCTGGTGGGGAGCCCGGCGAGGGAGGGCCTGGAAGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 90 bp CCAGAACCGCGCGGCTGCAGTCACCTCGAGCAGGCCGGCTGCTCCTaGCAGGCGGTGTCGGCGCCGGCGGGGGACTCGGCGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PEPRGCSHLEQAGCS*QAVSAPAGDSAPRA
Trigger: GGCCCTGGGCGCCGAGTCCCCCGCCGGCGCCGACACCGCCTGCCAGGAGCAGCCGGCCTGCTCGAGGTGACTGCAGCCGCGCGGTTCTGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 90 bp CAGCTGGCCGGAGTAGGCCACGTGGCCAGCGGCGCCGCCGAGCGGTaGGCTGCGCTCAGGGGACTGGCTAGCCGGCGAGTGCAGGATGCC +
Preference number: 5 (lower is better)
Translates to: QLAGVGHVASGAAER*AALRGLASRRVQDA
Trigger: GGCATCCTGCACTCGCCGGCTAGCCAGTCCCCTGAGCGCAGCCCACCGCTCGGCGGCGCCGCTGGCCACGTGGCCTACTCCGGCCAGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS-3UTR CAA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGCCGTGCGTACCCGCTaGGATGCTGGGCCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAAAVRTR*DAGPGG
Trigger: CCCGCCAGGCCCAGCATCCAAGCGGGTACGCACGGC...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS CCA 90 bp ACGTGGCCAGCGGCGCCGCCGAGCGGTGGGCTGCGCTCAGGGGACTaGCTAGCCGGCGAGTGCAGGATGCCCTTGGCCTTCTGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: TWPAAPPSGGLRSGD*LAGECRMPLAFWSF
Trigger: GAAGGACCAGAAGGCCAAGGGCATCCTGCACTCGCCGGCTAGCCAGTCCCCTGAGCGCAGCCCACCGCTCGGCGGCGCCGCTGGCCACGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS GCA 90 bp ACACCGGGCTGCCCTGCAAGTTGGCGCTGGCGAAGCCGCCGCCGTTaGTCGCCATGGGATGGGGCTCGAACTCCGGCGCTGCGTAGCGCT +
Preference number: 5 (lower is better)
Translates to: TPGCPASWRWRSRRR*SPWDGARTPALRSA
Trigger: AGCGCTACGCAGCGCCGGAGTTCGAGCCCCATCCCATGGCGAGCAACGGCGGCGGCTTCGCCAGCGCCAACTTGCAGGGCAGCCCGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS GCA 90 bp GCCGCCGCCGTTGCTCGCCATGGGATGGGGCTCGAACTCCGGCGCTaGGTAGCGCTTCTGTTGTGGCAGGCAGCTGCTGAGTGGCGCCGT +
Preference number: 5 (lower is better)
Translates to: AAAVARHGMGLELRR*VALLLWQAAAEWRR
Trigger: ACGGCGCCACTCAGCAGCTGCCTGCCACAACAGAAGCGCTACGCAGCGCCGGAGTTCGAGCCCCATCCCATGGCGAGCAACGGCGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS GCA 90 bp GGGGTTGTGGTGGCTGCTGCTCTGAGTTCAGACCAGGAGGCTGGCTaGCACCACCCCCACCCTGGCTGTTCCCAGTGCCCGGCCGCATGC +
Preference number: 5 (lower is better)
Translates to: GVVVAAALSSDQEAG*HHPHPGCSQCPAAC
Trigger: GCATGCGGCCGGGCACTGGGAACAGCCAGGGTGGGGGTGGTGGCAGCCAGCCTCCTGGTCTGAACTCAGAGCAGCAGCCACCACAACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS GCA 90 bp AGACCCGCTCATGTTGGTGAAGAAGCCGCGCCAGAACCGCGCGGCTaGAGTCACCTCGAGCAGGCCGGCTGCTCCTGGCAGGCGGTGTCG +
Preference number: 5 (lower is better)
Translates to: RPAHVGEEAAPEPRG*SHLEQAGCSWQAVS
Trigger: CGACACCGCCTGCCAGGAGCAGCCGGCCTGCTCGAGGTGACTGCAGCCGCGCGGTTCTGGCGCGGCTTCTTCACCAACATGAGCGGGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS GCA 90 bp GATCCGAAGGCTGCCGAGCTACAGGCGGCGGTCGGTCCGGGCGTCTaGTGTAATCCACTAGGCGCTGCCCGGCTGCGCTCACTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: DPKAAELQAAVGPGV*CNPLGAARLRSLSD
Trigger: GTCCGAGAGTGAGCGCAGCCGGGCAGCGCCTAGTGGATTACAGCAGACGCCCGGACCGACCGCCGCCTGTAGCTCGGCAGCCTTCGGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 90 bp GTGGCGCCGTGTAGGCGGCCAGGCCGTACATATTGGGCTGTGATTTaGCGAAAGCAGGCGGCGAGGGCGCGTCGTAGGCCAGGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: VAPCRRPGRTYWAVI*RKQAARARRRPGRA
Trigger: TGCCCGGCCTGGCCTACGACGCGCCCTCGCCGCCTGCTTTCGCCAAATCACAGCCCAATATGTACGGCCTGGCCGCCTACACGGCGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CCA 90 bp TGCCGCGAGTTCGGGCTGGCGGCGGCCGCTACAGATGCGTCAGTTTaGGAGCCTCCGGCAGTCGTCCCTGAGACGAGTGGTGGGCCGAGA +
Preference number: 5 (lower is better)
Translates to: CREFGLAAAATDASV*EPPAVVPETSGGPR
Trigger: TCTCGGCCCACCACTCGTCTCAGGGACGACTGCCGGAGGCTCCCAAACTGACGCATCTGTAGCGGCCGCCGCCAGCCCGAACTCGCGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS TCA 90 bp GCTGAGTGGCGCCGTGTAGGCGGCCAGGCCGTACATATTGGGCTGTaGTTTGGCGAAAGCAGGCGGCGAGGGCGCGTCGTAGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AEWRRVGGQAVHIGL*FGESRRRGRVVGQA
Trigger: GGCCTGGCCTACGACGCGCCCTCGCCGCCTGCTTTCGCCAAATCACAGCCCAATATGTACGGCCTGGCCGCCTACACGGCGCCACTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS TCA 90 bp TGTAGTCCACGCTGGCCGACGACGGGTGCGAGAGGTGGCCCAGGTTaGAGACAGGCCCGGACGCGGGCGCCATGGACTCGACGAAGTTGC +
Preference number: 5 (lower is better)
Translates to: CSPRWPTTGARGGPG*RQARTRAPWTRRSC
Trigger: GCAACTTCGTCGAGTCCATGGCGCCCGCGTCCGGGCCTGTCTTCAACCTGGGCCACCTCTCGCACCCGTCGTCGGCCAGCGTGGACTACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS TCA 90 bp GCCCGGCTGCGCTCACTCTCGGACGCAGAGACCCGCTCATGTTGGTaGAGAAGCCGCGCCAGAACCGCGCGGCTGCAGTCACCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: ARLRSLSDAETRSCW*RSRARTARLQSPRA
Trigger: TGCTCGAGGTGACTGCAGCCGCGCGGTTCTGGCGCGGCTTCTTCACCAACATGAGCGGGTCTCTGCGTCCGAGAGTGAGCGCAGCCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS GCA 90 bp TTCCGGTGCCCCCGCATACCCTACCCGGCTGCCTGGCCGCCGCACTaGGGCAAGGCCGTAAATACCTCTAACAGCTGCCTGCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: FRCPRIPYPAAWPPH*GKAVNTSNSCLPAQ
Trigger: CTGGGCTGGCAGGCAGCTGTTAGAGGTATTTACGGCCTTGCCGCAGTGCGGCGGCCAGGCAGCCGGGTAGGGTATGCGGGGGCACCGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 90 bp CATGGGATGGGGCTCGAACTCCGGCGCTGCGTAGCGCTTCTGTTGTaGCAGGCAGCTGCTGAGTGGCGCCGTGTAGGCGGCCAGGCCGTA +
Preference number: 5 (lower is better)
Translates to: HGMGLELRRCVALLL*QAAAEWRRVGGQAV
Trigger: TACGGCCTGGCCGCCTACACGGCGCCACTCAGCAGCTGCCTGCCACAACAGAAGCGCTACGCAGCGCCGGAGTTCGAGCCCCATCCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CCA 90 bp TGCCCTGCAAGTTGGCGCTGGCGAAGCCGCCGCCGTTGCTCGCCATaGGATGGGGCTCGAACTCCGGCGCTGCGTAGCGCTTCTGTTGTG +
Preference number: 5 (lower is better)
Translates to: CPASWRWRSRRRCSP*DGARTPALRSASVV
Trigger: CACAACAGAAGCGCTACGCAGCGCCGGAGTTCGAGCCCCATCCCATGGCGAGCAACGGCGGCGGCTTCGCCAGCGCCAACTTGCAGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS-3UTR CAA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGAGGGCTGCCCTGCAAGTaGGCGCTGGCGAAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRGLPCK*ALAKPP
Trigger: CGGCGGCTTCGCCAGCGCCAACTTGCAGGGCAGCCC...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS CCA 90 bp CTTCTCCCCAGCTTCCGGTGCCCCCGCATACCCTACCCGGCTGCCTaGCCGCCGCACTGCGGCAAGGCCGTAAATACCTCTAACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LLPSFRCPRIPYPAA*PPHCGKAVNTSNSC
Trigger: GCAGCTGTTAGAGGTATTTACGGCCTTGCCGCAGTGCGGCGGCCAGGCAGCCGGGTAGGGTATGCGGGGGCACCGGAAGCTGGGGAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS-3UTR CAA 90 bp GCGGGCCAGGCCCAAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGAGGAGCTAGAAGCATaGGGCCCACCTTTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: AGQAQDSPSSGPSAGRAAEELEA*GPPLGF
Trigger: GAAGCCCAAAGGTGGGCCCAATGCTTCTAGCTCCTC...AGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTTGGGCCTGGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS TCA 90 bp CGAACTCCGGCGCTGCGTAGCGCTTCTGTTGTGGCAGGCAGCTGCTaGGTGGCGCCGTGTAGGCGGCCAGGCCGTACATATTGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RTPALRSASVVAGSC*VAPCRRPGRTYWAV
Trigger: CACAGCCCAATATGTACGGCCTGGCCGCCTACACGGCGCCACTCAGCAGCTGCCTGCCACAACAGAAGCGCTACGCAGCGCCGGAGTTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CCA 90 bp CCCCACCACTACAGCAAGAGAGGTAATTTTGCCGCGAGTTCGGGCTaGCGGCGGCCGCTACAGATGCGTCAGTTTGGGAGCCTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: PHHYSKRGNFAASSG*RRPLQMRQFGSLRQ
Trigger: CTGCCGGAGGCTCCCAAACTGACGCATCTGTAGCGGCCGCCGCCAGCCCGAACTCGCGGCAAAATTACCTCTCTTGCTGTAGTGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CCA 90 bp CAGCTCCTTTGTGGGCTGGGGCTCTCAGAGGGGCAGAGCTCTGGATaGAGCAGGCAGAACCTGGATAGTCAGTGTCCAGGGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: QLLCGLGLSEGQSSG*SRQNLDSQCPGSWQ
Trigger: CTGCCAGCTCCCTGGACACTGACTATCCAGGTTCTGCCTGCTCCATCCAGAGCTCTGCCCCTCTGAGAGCCCCAGCCCACAAAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS-3UTR CAA 90 bp GCCCCCACGGCCTGGAAGCGAATTCCTAAGCTCGGCTGGATAAATCTACAAATAGCCGTGCGTACCCGCTaGGATGCTGGGCCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: APTAWKRIPKLGWINLQIAVRTR*DAGPGG
Trigger: CCCGCCAGGCCCAGCATCCAAGCGGGTACGCACGGC...TATTTGTAGATTTATCCAGCCGAGCTTAGGAATTCGCTTCCAGGCCGTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp CTTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGAGTGCAGGATGCCCTaGGCCTTCTGGTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LAADLWRVTQRTPMEGRPECRMP*AFWSFL
Trigger: CAAGAAGGACCAGAAGGCCAAGGGCATCCTGCACTC...GGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCGCGAAGCCGCCGCCGTaGCTCGCCATGGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSAKPPP*LAMGWG
Trigger: GCCCCATCCCATGGCGAGCAACGGCGGCGGCTTCGC...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGGGCTGCCCTGCAAGTaGGCGCTGGCGAAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSGLPCK*ALAKPP
Trigger: CGGCGGCTTCGCCAGCGCCAACTTGCAGGGCAGCCC...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCGGTCCATGGTGGTGGTaGCCTGGAATCTGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVGPWWW*PGICAA
Trigger: CGCCGCGCAGATTCCAGGCAACCACCACCATGGACC...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp AAGACTCTCCAAGCTCTGGTCCCTCTGCAGGGCGCGCCGCTGATGGGTCTCAGATACAGATGCGTCAGTTaGGGAGCCTCCGGCAGTCGT +
Preference number: 5 (lower is better)
Translates to: KTLQALVPLQGAPLMGLRYRCVS*GASGSR
Trigger: ACGACTGCCGGAGGCTCCCAAACTGACGCATCTGTA...TCTGAGACCCATCAGCGGCGCGCCCTGCAGAGGGACCAGAGCTTGGAGAGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp CTTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCCCAGATTGGAGTCCCTaGGTCCGCAGTATGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LAADLWRVTQRTPMEGRPPDWSP*VRSMWH
Trigger: GTGCCACATACTGCGGACCAAGGGACTCCAATCTGG...GGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS TCA 90 bp CTTTCTCCTGGTCCTCGCCAGAGATCTCAAGCCCAGTTCATGGCCTaGCCCGTCGTCACCAAGGCCCGGACATGCTATCGGCTCCCTGAT +
Preference number: 5 (lower is better)
Translates to: LSPGPRQRSQAQFMA*PVVTKARTCYRLPD
Trigger: ATCAGGGAGCCGATAGCATGTCCGGGCCTTGGTGACGACGGGTCAGGCCATGAACTGGGCTTGAGATCTCTGGCGAGGACCAGGAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 90 bp TTCGTCTTTCTCCTGGTCCTCGCCAGAGATCTCAAGCCCAGTTCATaGCCTGACCCGTCGTCACCAAGGCCCGGACATGCTATCGGCTCC +
Preference number: 5 (lower is better)
Translates to: FVFLLVLARDLKPSS*PDPSSPRPGHAIGS
Trigger: GGAGCCGATAGCATGTCCGGGCCTTGGTGACGACGGGTCAGGCCATGAACTGGGCTTGAGATCTCTGGCGAGGACCAGGAGAAAGACGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS-3UTR CAA 90 bp GCAGGGCGCGCCGCTGATGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATGCGTAGCGCTTCTGTaGTGGCAGGCAGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: AGRAADGSQTYLWDTITRCVALL*WQAAAE
Trigger: CTCAGCAGCTGCCTGCCACAACAGAAGCGCTACGCA...TCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGGCGCGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGGTCCCAACCCTGGTCTaGCGCGCTCGCAGACACGGC +
Preference number: 5 (lower is better)
Translates to: GSQTYLWDTITRLESLGPVPTLV*RARRHG
Trigger: GCCGTGTCTGCGAGCGCGCAAGACCAGGGTTGGGAC...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS GCA 90 bp GCCTTCCCCCTTTGTCTGCAGACAACACTGTCCCAACCCTGGTCTTaGGCGCTCGCAGACACGGCCATATACTCGAGCACACGGAATTCC +
Preference number: 5 (lower is better)
Translates to: AFPLCLQTTLSQPWS*ALADTAIYSSTRNS
Trigger: GGAATTCCGTGTGCTCGAGTATATGGCCGTGTCTGCGAGCGCGCAAGACCAGGGTTGGGACAGTGTTGTCTGCAGACAAAGGGGGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS-3UTR CAA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCGCATTGGGCCCACCTTaGGGCTTCTTGGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVALGPP*GFLAGT
Trigger: AGTGCCTGCCAAGAAGCCCAAAGGTGGGCCCAATGC...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCTGCGTAGCGCTTCTGTaGTGGCAGGCAGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVCVALL*WQAAAE
Trigger: CTCAGCAGCTGCCTGCCACAACAGAAGCGCTACGCA...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS GCA 90 bp GCCTGGCCGCCGCACTGCGGCAAGGCCGTAAATACCTCTAACAGCTaGCTGCCAGCCCAGGGTGAAATACTGTCTTTGTTCGATTTCCCT +
Preference number: 5 (lower is better)
Translates to: AWPPHCGKAVNTSNS*LPAQGEILSLFDFP
Trigger: AGGGAAATCGAACAAAGACAGTATTTCACCCTGGGCTGGCAGGCAGCTGTTAGAGGTATTTACGGCCTTGCCGCAGTGCGGCGGCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS-3UTR CAA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCCAGGGGAAGATCTGCTaGCTGATGGTGGCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVQGKIC*LMVAEE
Trigger: CTCCTCAGCCACCATCAGCAAGCAGATCTTCCCCTG...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCGAGTGCAGGATGCCCTaGGCCTTCTGGTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVECRMP*AFWSFL
Trigger: CAAGAAGGACCAGAAGGCCAAGGGCATCCTGCACTC...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCGAGAGGTGGCCCAGGTaGAAGACAGGCCCGGACGCG +
Preference number: 5 (lower is better)
Translates to: VALSNLQGRILAADLWRVERWPR*KTGPDA
Trigger: CGCGTCCGGGCCTGTCTTCAACCTGGGCCACCTCTC...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGGGTCCATGGTGGTGGTaGCCTGGAATCTGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: LTFGTPLPDWSPLVRSMWGPWWW*PGICAA
Trigger: CGCCGCGCAGATTCCAGGCAACCACCACCATGGACC...CCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GCAGGGCGCGCCGCTGATGGGTCTCAGACTTACCTTTGGGACACCATTACCAGAAAGCAGCCTTCTGCATaGTGCACTCAGGAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: AGRAADGSQTYLWDTITRKQPSA*CTQEAP
Trigger: TGGAGCTTCCTGAGTGCACAATGCAGAAGGCTGCTT...TCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCATCAGCGGCGCGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGGCATTGGGCCCACCTTaGGGCTTCTTGGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: GSQTYLWDTITRLESLGPALGPP*GFLAGT
Trigger: AGTGCCTGCCAAGAAGCCCAAAGGTGGGCCCAATGC...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp AAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAATGTGGCGAGAGGTGGCCCAGGTaGAAGACAGGCCCGGACGCG +
Preference number: 5 (lower is better)
Translates to: KLLSQLVQTRGTKEVKCGERWPR*KTGPDA
Trigger: CGCGTCCGGGCCTGTCTTCAACCTGGGCCACCTCTC...GCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TTGTGCCACGCCACCGGGCTTCCTGACTCTACCCATGAAGGACAATTTGCGGTCAAGCAGCCTTCTGCATaGTGCACTCAGGAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: LCHATGLPDSTHEGQFAVKQPSA*CTQEAP
Trigger: TGGAGCTTCCTGAGTGCACAATGCAGAAGGCTGCTT...GACCGCAAATTGTCCTTCATGGGTAGAGTCAGGAAGCCCGGTGGCGTGGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCAGCGAAGCCGCCGCCGTaGCTCGCCATGGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSAKPPP*LAMGWG
Trigger: GCCCCATCCCATGGCGAGCAACGGCGGCGGCTTCGC...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTATGGACTCGACGAAGTaGCCGCCCACGTACACCGGG +
Preference number: 5 (lower is better)
Translates to: DLPLGHHYQIGVPWSAVCMDSTK*PPTYTG
Trigger: CCCGGTGTACGTGGGCGGCAACTTCGTCGAGTCCAT...ACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGGCAAGAGAGGTAATTTaGCCGCGAGTTCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: GSQTYLWDTITRLESLGPAREVI*PRVRAG
Trigger: GCCAGCCCGAACTCGCGGCAAAATTACCTCTCTTGC...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp CTTGCGGCTGATTTATGGCGAGTCACCCAAAGGACGCCCATGGAGGGGAGGCCCGTCTCAGACTTACCTTaGGGACACCATTACCAGATT +
Preference number: 5 (lower is better)
Translates to: LAADLWRVTQRTPMEGRPVSDLP*GHHYQI
Trigger: AATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGAC...GGGCCTCCCCTCCATGGGCGTCCTTTGGGTGACTCGCCATAAATCAGCCGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCGCATGCAGCTGCCATaGAGTTCAGCTCCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: GSQTYLWDTITRLESLGPRMQLP*SSAPLW
Trigger: CCACAAAGGAGCTGAACTCAATGGCAGCTGCATGCG...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGGAGGAGCTAGAAGCATaGGGCCCACCTTTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LTFGTPLPDWSPLVRSMWEELEA*GPPLGF
Trigger: GAAGCCCAAAGGTGGGCCCAATGCTTCTAGCTCCTC...CCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGCAGGGGAAGATCTGCTaGCTGATGGTGGCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: LVRSMWHCQIYREGSLRLQGKIC*LMVAEE
Trigger: CTCCTCAGCCACCATCAGCAAGCAGATCTTCCCCTG...CAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCTACAGATGCGTCAGTTaGGGAGCCTCCGGCAGTCGT +
Preference number: 5 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSYRCVS*GASGSR
Trigger: ACGACTGCCGGAGGCTCCCAAACTGACGCATCTGTA...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAAGAGAGGTAATTTaGCCGCGAGTTCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSAREVI*PRVRAG
Trigger: GCCAGCCCGAACTCGCGGCAAAATTACCTCTCTTGC...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCCCAGATTGGAGTCCCTaGGTCCGCAGTATGTGGCAC +
Preference number: 5 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSPDWSP*VRSMWH
Trigger: GTGCCACATACTGCGGACCAAGGGACTCCAATCTGG...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGGACACCATTACCAGATaGGAGTCCCTTGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: GSQTYLWDTITRLESLGPDTITR*ESLGPQ
Trigger: CTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTC...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGAATGACCAAAGTGTGTaGTGCCACGCCACCGGGCTT +
Preference number: 5 (lower is better)
Translates to: GSQTYLWDTITRLESLGPNDQSV*CHATGL
Trigger: AAGCCCGGTGGCGTGGCACAACACACTTTGGTCATT...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCTTGAGTTCAGCTCCTTaGTGGGCTGGGGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSLSSAP*WAGALR
Trigger: TCTGAGAGCCCCAGCCCACAAAGGAGCTGAACTCAA...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TGGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCATATTGGGCTGTGATTaGGCGAAAGCAGGCGGCGAG +
Preference number: 5 (lower is better)
Translates to: WVSDLPLGHHYQIGVPWSILGCD*AKAGGE
Trigger: CTCGCCGCCTGCTTTCGCCAAATCACAGCCCAATAT...GGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GGGTCTCAGACTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGGCCAGGCCGTACATATaGGGCTGTGATTTGGCGAAA +
Preference number: 5 (lower is better)
Translates to: GSQTYLWDTITRLESLGPARPYI*GCDLAK
Trigger: TTTCGCCAAATCACAGCCCAATATGTACGGCCTGGC...CGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGAATGACCAAAGTGTGTaGTGCCACGCCACCGGGCTT +
Preference number: 5 (lower is better)
Translates to: LTFGTPLPDWSPLVRSMWNDQSV*CHATGL
Trigger: AAGCCCGGTGGCGTGGCACAACACACTTTGGTCATT...CCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCCGCATGCAGCTGCCATaGAGTTCAGCTCCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: VALSNLQGRILAADLWRVRMQLP*SSAPLW
Trigger: CCACAAAGGAGCTGAACTCAATGGCAGCTGCATGCG...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCATATTGGGCTGTGATTaGGCGAAAGCAGGCGGCGAG +
Preference number: 5 (lower is better)
Translates to: VALSNLQGRILAADLWRVILGCD*AKAGGE
Trigger: CTCGCCGCCTGCTTTCGCCAAATCACAGCCCAATAT...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp TGTTCAAAACTACTCTCTCAACTAGTTCAGACCAGGGGGACTAAGGAGGTGAAAATGGACTCGACGAAGTaGCCGCCCACGTACACCGGG +
Preference number: 5 (lower is better)
Translates to: CSKLLSQLVQTRGTKEVKMDSTK*PPTYTG
Trigger: CCCGGTGTACGTGGGCGGCAACTTCGTCGAGTCCAT...TTTCACCTCCTTAGTCCCCCTGGTCTGAACTAGTTGAGAGAGTAGTTTTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCGACACCATTACCAGATaGGAGTCCCTTGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: VALSNLQGRILAADLWRVDTITR*ESLGPQ
Trigger: CTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTC...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS-3UTR CAA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCGCTAGCCTTCCCCCTTaGTCTGCAGACAACACTGTC +
Preference number: 5 (lower is better)
Translates to: VALSNLQGRILAADLWRVASLPP*SADNTV
Trigger: GACAGTGTTGTCTGCAGACAAAGGGGGAAGGCTAGC...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS GCA 90 bp CTCCAAACAGTCCTGGGTTTTCATAGTAAGCAGCCTTCTGCATTGTaGACTCAGGAAGCTCCAGGGCCTGCTGACCCTGCTCAAATAACA +
Preference number: 5 (lower is better)
Translates to: LQTVLGFHSKQPSAL*TQEAPGPADPAQIT
Trigger: TGTTATTTGAGCAGGGTCAGCAGGCCCTGGAGCTTCCTGAGTGCACAATGCAGAAGGCTGCTTACTATGAAAACCCAGGACTGTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS-3UTR CAA 90 bp GTGGCACTGTCAAATTTACAGGGAAGGATCCTTGCGGCTGATTTATGGCGAGTCGCCAGGCCGTACATATaGGGCTGTGATTTGGCGAAA +
Preference number: 5 (lower is better)
Translates to: VALSNLQGRILAADLWRVARPYI*GCDLAK
Trigger: TTTCGCCAAATCACAGCCCAATATGTACGGCCTGGC...GACTCGCCATAAATCAGCCGCAAGGATCCTTCCCTGTAAATTTGACAGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS TCA 90 bp TGTTATGTGGATCAGAAATGTCACATCTTGGGCACCGCTTCCCTTTaGGTCGTTCTTCAAGGCGGGGAAAACCATCCTACATCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: CYVDQKCHILGTASL*VVLQGGENHPTSRE
Trigger: CTCTCTGGATGTAGGATGGTTTTCCCCGCCTTGAAGAACGACTCAAAGGGAAGCGGTGCCCAAGATGTGACATTTCTGATCCACATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 90 bp AGCAGCATCTCCTCGTTGCCAATGAACACTCTGAAGGTTGTTATGTaGATCAGAAATGTCACATCTTGGGCACCGCTTCCCTTTGAGTCG +
Preference number: 5 (lower is better)
Translates to: SSISSLPMNTLKVVM*IRNVTSWAPLPFES
Trigger: CGACTCAAAGGGAAGCGGTGCCCAAGATGTGACATTTCTGATCCACATAACAACCTTCAGAGTGTTCATTGGCAACGAGGAGATGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS-3UTR CAA 90 bp CTTACCTTTGGGACACCATTACCAGATTGGAGTCCCTTGGTCCGCAGTATGTGGGTCTCAGACTTACCTTaGGGACACCATTACCAGATT +
Preference number: 5 (lower is better)
Translates to: LTFGTPLPDWSPLVRSMWVSDLP*GHHYQI
Trigger: AATCTGGTAATGGTGTCCCAAAGGTAAGTCTGAGAC...CCACATACTGCGGACCAAGGGACTCCAATCTGGTAATGGTGTCCCAAAGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS CCA 90 bp ATGAACACTCTGAAGGTTGTTATGTGGATCAGAAATGTCACATCTTaGGCACCGCTTCCCTTTGAGTCGTTCTTCAAGGCGGGGAAAACC +
Preference number: 5 (lower is better)
Translates to: MNTLKVVMWIRNVTS*APLPFESFFKAGKT
Trigger: GGTTTTCCCCGCCTTGAAGAACGACTCAAAGGGAAGCGGTGCCCAAGATGTGACATTTCTGATCCACATAACAACCTTCAGAGTGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS-3UTR CAA 90 bp TGGAGTCCCTTGGTCCGCAGTATGTGGCACTGTCAAATTTACAGGGAAGGATCCCCTGCTCAAATAACATaGACTACCACTGTATCCTTC +
Preference number: 5 (lower is better)
Translates to: WSPLVRSMWHCQIYREGSPAQIT*TTTVSF
Trigger: GAAGGATACAGTGGTAGTCAATGTTATTTGAGCAGG...GGATCCTTCCCTGTAAATTTGACAGTGCCACATACTGCGGACCAAGGGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS GCA 90 bp TGCCTGCCAGCCCAGGGTGAAATACTGTCTTTGTTCGATTTCCCTTaGCTCTCTGATTCAGAAAACAGAACTCTGGCGAAATTTATTTGT +
Preference number: 5 (lower is better)
Translates to: CLPAQGEILSLFDFP*LSDSENRTLAKFIC
Trigger: ACAAATAAATTTCGCCAGAGTTCTGTTTTCTGAATCAGAGAGGCAAGGGAAATCGAACAAAGACAGTATTTCACCCTGGGCTGGCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS-3UTR CAA 90 bp TATGTCAACTACAAACACCAGCCACGGTTACGACTGTTCAAAACTACTCTCTCACCTGCTCAAATAACATaGACTACCACTGTATCCTTC +
Preference number: 5 (lower is better)
Translates to: YVNYKHQPRLRLFKTTLSPAQIT*TTTVSF
Trigger: GAAGGATACAGTGGTAGTCAATGTTATTTGAGCAGG...TGAGAGAGTAGTTTTGAACAGTCGTAACCGTGGCTGGTGTTTGTAGTTGACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249440.4
ENST00000410016.5
CDS CCA 72 bp GCCCTCCCTCGCCGGGCTCCCCACCAGCTCCGGAGGTaGCGGCGATGCGGACCGAGTGAGCGGCGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: ALPRRAPHQLRR*RRCGPSERRWG
Trigger: GCCCCACCGCCGCTCACTCGGTCCGCATCGCCGCCACCTCCGGAGCTGGTGGGGAGCCCGGCGAGGGAGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 72 bp CGCGGCTGCAGTCACCTCGAGCAGGCCGGCTGCTCCTaGCAGGCGGTGTCGGCGCCGGCGGGGGACTCGGCG +
Preference number: 6 (lower is better)
Translates to: RGCSHLEQAGCS*QAVSAPAGDSA
Trigger: CGCCGAGTCCCCCGCCGGCGCCGACACCGCCTGCCAGGAGCAGCCGGCCTGCTCGAGGTGACTGCAGCCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS GCA 72 bp GAACCGCGCGGCTGCAGTCACCTCGAGCAGGCCGGCTaGTCCTGGCAGGCGGTGTCGGCGCCGGCGGGGGAC +
Preference number: 6 (lower is better)
Translates to: EPRGCSHLEQAG*SWQAVSAPAGD
Trigger: GTCCCCCGCCGGCGCCGACACCGCCTGCCAGGAGCAGCCGGCCTGCTCGAGGTGACTGCAGCCGCGCGGTTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 72 bp GGAGTAGGCCACGTGGCCAGCGGCGCCGCCGAGCGGTaGGCTGCGCTCAGGGGACTGGCTAGCCGGCGAGTG +
Preference number: 6 (lower is better)
Translates to: GVGHVASGAAER*AALRGLASRRV
Trigger: CACTCGCCGGCTAGCCAGTCCCCTGAGCGCAGCCCACCGCTCGGCGGCGCCGCTGGCCACGTGGCCTACTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CCA 72 bp GCGGCGCCGCCGAGCGGTGGGCTGCGCTCAGGGGACTaGCTAGCCGGCGAGTGCAGGATGCCCTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: AAPPSGGLRSGD*LAGECRMPLAF
Trigger: GAAGGCCAAGGGCATCCTGCACTCGCCGGCTAGCCAGTCCCCTGAGCGCAGCCCACCGCTCGGCGGCGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS TCA 72 bp CGCTGGCCGACGACGGGTGCGAGAGGTGGCCCAGGTTaGAGACAGGCCCGGACGCGGGCGCCATGGACTCGA +
Preference number: 6 (lower is better)
Translates to: RWPTTGARGGPG*RQARTRAPWTR
Trigger: TCGAGTCCATGGCGCCCGCGTCCGGGCCTGTCTTCAACCTGGGCCACCTCTCGCACCCGTCGTCGGCCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CAA 72 bp ACGCTGGCCGACGACGGGTGCGAGAGGTGGCCCAGGTaGAAGACAGGCCCGGACGCGGGCGCCATGGACTCG +
Preference number: 6 (lower is better)
Translates to: TLADDGCERWPR*KTGPDAGAMDS
Trigger: CGAGTCCATGGCGCCCGCGTCCGGGCCTGTCTTCAACCTGGGCCACCTCTCGCACCCGTCGTCGGCCAGCGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS GCA 72 bp TGCCCTGCAAGTTGGCGCTGGCGAAGCCGCCGCCGTTaGTCGCCATGGGATGGGGCTCGAACTCCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: CPASWRWRSRRR*SPWDGARTPAL
Trigger: CAGCGCCGGAGTTCGAGCCCCATCCCATGGCGAGCAACGGCGGCGGCTTCGCCAGCGCCAACTTGCAGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS GCA 72 bp GCTGCCGAGCTACAGGCGGCGGTCGGTCCGGGCGTCTaGTGTAATCCACTAGGCGCTGCCCGGCTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: AAELQAAVGPGV*CNPLGAARLRS
Trigger: TGAGCGCAGCCGGGCAGCGCCTAGTGGATTACAGCAGACGCCCGGACCGACCGCCGCCTGTAGCTCGGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 72 bp AGTTGGCGCTGGCGAAGCCGCCGCCGTTGCTCGCCATaGGATGGGGCTCGAACTCCGGCGCTGCGTAGCGCT +
Preference number: 6 (lower is better)
Translates to: SWRWRSRRRCSP*DGARTPALRSA
Trigger: AGCGCTACGCAGCGCCGGAGTTCGAGCCCCATCCCATGGCGAGCAACGGCGGCGGCTTCGCCAGCGCCAACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CAA 72 bp CTGCCCTGCAAGTTGGCGCTGGCGAAGCCGCCGCCGTaGCTCGCCATGGGATGGGGCTCGAACTCCGGCGCT +
Preference number: 6 (lower is better)
Translates to: LPCKLALAKPPP*LAMGWGSNSGA
Trigger: AGCGCCGGAGTTCGAGCCCCATCCCATGGCGAGCAACGGCGGCGGCTTCGCCAGCGCCAACTTGCAGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CAA 90 bp CGCTGCCCGGCTGCGCTCACTCTCGGACGCAGAGACCCGCTCATGTaGGTGAAGAAGCCGCGCCAGAACCGCGCGGCTGCAGTCACCTCG +
Preference number: 6 (lower is better)
Translates to: RCPAALTLGRRDPLM*VKKPRQNRAAAVTS
Trigger: CGAGGTGACTGCAGCCGCGCGGTTCTGGCGCGGCTTCTTCACCAACATGAGCGGGTCTCTGCGTCCGAGAGTGAGCGCAGCCGGGCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS GCA 72 bp CATGTTGGTGAAGAAGCCGCGCCAGAACCGCGCGGCTaGAGTCACCTCGAGCAGGCCGGCTGCTCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: HVGEEAAPEPRG*SHLEQAGCSWQ
Trigger: CTGCCAGGAGCAGCCGGCCTGCTCGAGGTGACTGCAGCCGCGCGGTTCTGGCGCGGCTTCTTCACCAACATG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 72 bp AGCTTCCGGTGCCCCCGCATACCCTACCCGGCTGCCTaGCCGCCGCACTGCGGCAAGGCCGTAAATACCTCT +
Preference number: 6 (lower is better)
Translates to: SFRCPRIPYPAA*PPHCGKAVNTS
Trigger: AGAGGTATTTACGGCCTTGCCGCAGTGCGGCGGCCAGGCAGCCGGGTAGGGTATGCGGGGGCACCGGAAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS TCA 72 bp CCGAGGCCGCGGCGGACTCCGCAATCCCGCAGCCGGTaGCTGGAGCCCACCTCTGCAGAGACAAAGGTTAGA +
Preference number: 6 (lower is better)
Translates to: PRPRRTPQSRSR*LEPTSAETKVR
Trigger: TCTAACCTTTGTCTCTGCAGAGGTGGGCTCCAGTCACCGGCTGCGGGATTGCGGAGTCCGCCGCGGCCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS GCA 72 bp CCCCGCATACCCTACCCGGCTGCCTGGCCGCCGCACTaGGGCAAGGCCGTAAATACCTCTAACAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PRIPYPAAWPPH*GKAVNTSNSCL
Trigger: CAGGCAGCTGTTAGAGGTATTTACGGCCTTGCCGCAGTGCGGCGGCCAGGCAGCCGGGTAGGGTATGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 72 bp TTCGGGCTGGCGGCGGCCGCTACAGATGCGTCAGTTTaGGAGCCTCCGGCAGTCGTCCCTGAGACGAGTGGT +
Preference number: 6 (lower is better)
Translates to: FGLAAAATDASV*EPPAVVPETSG
Trigger: ACCACTCGTCTCAGGGACGACTGCCGGAGGCTCCCAAACTGACGCATCTGTAGCGGCCGCCGCCAGCCCGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CAA 72 bp GCTGCGCTCACTCTCGGACGCAGAGACCCGCTCATGTaGGTGAAGAAGCCGCGCCAGAACCGCGCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: AALTLGRRDPLM*VKKPRQNRAAA
Trigger: TGCAGCCGCGCGGTTCTGGCGCGGCTTCTTCACCAACATGAGCGGGTCTCTGCGTCCGAGAGTGAGCGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS TCA 72 bp CGCCGTGTAGGCGGCCAGGCCGTACATATTGGGCTGTaGTTTGGCGAAAGCAGGCGGCGAGGGCGCGTCGTA +
Preference number: 6 (lower is better)
Translates to: RRVGGQAVHIGL*FGESRRRGRVV
Trigger: TACGACGCGCCCTCGCCGCCTGCTTTCGCCAAATCACAGCCCAATATGTACGGCCTGGCCGCCTACACGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS TCA 72 bp CGCTCACTCTCGGACGCAGAGACCCGCTCATGTTGGTaGAGAAGCCGCGCCAGAACCGCGCGGCTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: RSLSDAETRSCW*RSRARTARLQS
Trigger: TGACTGCAGCCGCGCGGTTCTGGCGCGGCTTCTTCACCAACATGAGCGGGTCTCTGCGTCCGAGAGTGAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS GCA 72 bp GTTGCTCGCCATGGGATGGGGCTCGAACTCCGGCGCTaGGTAGCGCTTCTGTTGTGGCAGGCAGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: VARHGMGLELRR*VALLLWQAAAE
Trigger: CTCAGCAGCTGCCTGCCACAACAGAAGCGCTACGCAGCGCCGGAGTTCGAGCCCCATCCCATGGCGAGCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CAA 90 bp GCGGGCCCCACCCTCTACCCCACCACTACAGCAAGAGAGGTAATTTaGCCGCGAGTTCGGGCTGGCGGCGGCCGCTACAGATGCGTCAGT +
Preference number: 6 (lower is better)
Translates to: AGPTLYPTTTAREVI*PRVRAGGGRYRCVS
Trigger: ACTGACGCATCTGTAGCGGCCGCCGCCAGCCCGAACTCGCGGCAAAATTACCTCTCTTGCTGTAGTGGTGGGGTAGAGGGTGGGGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS TCA 72 bp GGCTGTTCCCAGTGCCCGGCCGCATGCAGCTGCCATTaGGTTCAGCTCCTTTGTGGGCTGGGGCTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: GCSQCPAACSCH*VQLLCGLGLSE
Trigger: CTCTGAGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGCAGCTGCATGCGGCCGGGCACTGGGAACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS CCA 72 bp TGTAGGCGGCCAGGCCGTACATATTGGGCTGTGATTTaGCGAAAGCAGGCGGCGAGGGCGCGTCGTAGGCCA +
Preference number: 6 (lower is better)
Translates to: CRRPGRTYWAVI*RKQAARARRRP
Trigger: TGGCCTACGACGCGCCCTCGCCGCCTGCTTTCGCCAAATCACAGCCCAATATGTACGGCCTGGCCGCCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CCA 72 bp TGCGTAGCGCTTCTGTTGTGGCAGGCAGCTGCTGAGTaGCGCCGTGTAGGCGGCCAGGCCGTACATATTGGG +
Preference number: 6 (lower is better)
Translates to: CVALLLWQAAAE*RRVGGQAVHIG
Trigger: CCCAATATGTACGGCCTGGCCGCCTACACGGCGCCACTCAGCAGCTGCCTGCCACAACAGAAGCGCTACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CCA 72 bp GGGATGAGGGTCGCAAGGTCCATGGTGGTGGTTGCCTaGAATCTGCGCGGCGCAACTGTAGTCCACGCTGGC +
Preference number: 6 (lower is better)
Translates to: GMRVARSMVVVA*NLRGATVVHAG
Trigger: GCCAGCGTGGACTACAGTTGCGCCGCGCAGATTCCAGGCAACCACCACCATGGACCTTGCGACCCTCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS TCA 72 bp GGTCCTCGCCAGAGATCTCAAGCCCAGTTCATGGCCTaGCCCGTCGTCACCAAGGCCCGGACATGCTATCGG +
Preference number: 6 (lower is better)
Translates to: GPRQRSQAQFMA*PVVTKARTCYR
Trigger: CCGATAGCATGTCCGGGCCTTGGTGACGACGGGTCAGGCCATGAACTGGGCTTGAGATCTCTGGCGAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS GCA 72 bp AGGTGGGATGAGGGTCGCAAGGTCCATGGTGGTGGTTaGCTGGAATCTGCGCGGCGCAACTGTAGTCCACGC +
Preference number: 6 (lower is better)
Translates to: RWDEGRKVHGGG*LESARRNCSPR
Trigger: GCGTGGACTACAGTTGCGCCGCGCAGATTCCAGGCAACCACCACCATGGACCTTGCGACCCTCATCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CCA 72 bp CTCCTGGTCCTCGCCAGAGATCTCAAGCCCAGTTCATaGCCTGACCCGTCGTCACCAAGGCCCGGACATGCT +
Preference number: 6 (lower is better)
Translates to: LLVLARDLKPSS*PDPSSPRPGHA
Trigger: AGCATGTCCGGGCCTTGGTGACGACGGGTCAGGCCATGAACTGGGCTTGAGATCTCTGGCGAGGACCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CAA 72 bp TGGCTGTTCCCAGTGCCCGGCCGCATGCAGCTGCCATaGAGTTCAGCTCCTTTGTGGGCTGGGGCTCTCAGA +
Preference number: 6 (lower is better)
Translates to: WLFPVPGRMQLP*SSAPLWAGALR
Trigger: TCTGAGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGCAGCTGCATGCGGCCGGGCACTGGGAACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS TCA 72 bp ACCACTGTATCCTTCACTGCCACCTCCAATGTCTGCTaGATCCTGAGAGAGCTGGGCCGGCCCCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: TTVSFTATSNVC*ILRELGRPPGS
Trigger: GGAGCCTGGGGGCCGGCCCAGCTCTCTCAGGATTCAGCAGACATTGGAGGTGGCAGTGAAGGATACAGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS CAA 90 bp ATGGTGGCTGAGGAGCTAGAAGCATTGGGCCCACCTTTGGGCTTCTaGGCAGGCACTCCACCTCCAGGATTGGTGGGTGAAGATGGGGGC +
Preference number: 6 (lower is better)
Translates to: MVAEELEALGPPLGF*AGTPPPGLVGEDGG
Trigger: GCCCCCATCTTCACCCACCAATCCTGGAGGTGGAGTGCCTGCCAAGAAGCCCAAAGGTGGGCCCAATGCTTCTAGCTCCTCAGCCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CCA 72 bp CATGCAGCTGCCATTGAGTTCAGCTCCTTTGTGGGCTaGGGCTCTCAGAGGGGCAGAGCTCTGGATGGAGCA +
Preference number: 6 (lower is better)
Translates to: HAAAIEFSSFVG*GSQRGRALDGA
Trigger: TGCTCCATCCAGAGCTCTGCCCCTCTGAGAGCCCCAGCCCACAAAGGAGCTGAACTCAATGGCAGCTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS CCA 72 bp TACAGCAAGAGAGGTAATTTTGCCGCGAGTTCGGGCTaGCGGCGGCCGCTACAGATGCGTCAGTTTGGGAGC +
Preference number: 6 (lower is better)
Translates to: YSKRGNFAASSG*RRPLQMRQFGS
Trigger: GCTCCCAAACTGACGCATCTGTAGCGGCCGCCGCCAGCCCGAACTCGCGGCAAAATTACCTCTCTTGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CAA 90 bp CAGGGGAAGATCTGCTTGCTGATGGTGGCTGAGGAGCTAGAAGCATaGGGCCCACCTTTGGGCTTCTTGGCAGGCACTCCACCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: QGKICLLMVAEELEA*GPPLGFLAGTPPPG
Trigger: TCCTGGAGGTGGAGTGCCTGCCAAGAAGCCCAAAGGTGGGCCCAATGCTTCTAGCTCCTCAGCCACCATCAGCAAGCAGATCTTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CAA 90 bp TGCTTGCTGATGGTGGCTGAGGAGCTAGAAGCATTGGGCCCACCTTaGGGCTTCTTGGCAGGCACTCCACCTCCAGGATTGGTGGGTGAA +
Preference number: 6 (lower is better)
Translates to: CLLMVAEELEALGPP*GFLAGTPPPGLVGE
Trigger: TTCACCCACCAATCCTGGAGGTGGAGTGCCTGCCAAGAAGCCCAAAGGTGGGCCCAATGCTTCTAGCTCCTCAGCCACCATCAGCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CAA 90 bp AGCCTTCCCCCTTTGTCTGCAGACAACACTGTCCCAACCCTGGTCTaGCGCGCTCGCAGACACGGCCATATACTCGAGCACACGGAATTC +
Preference number: 6 (lower is better)
Translates to: SLPPLSADNTVPTLV*RARRHGHILEHTEF
Trigger: GAATTCCGTGTGCTCGAGTATATGGCCGTGTCTGCGAGCGCGCAAGACCAGGGTTGGGACAGTGTTGTCTGCAGACAAAGGGGGAAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS CAA 72 bp ATGGTGGCTGAGGAGCTAGAAGCATTGGGCCCACCTTaGGGCTTCTTGGCAGGCACTCCACCTCCAGGATTG +
Preference number: 6 (lower is better)
Translates to: MVAEELEALGPP*GFLAGTPPPGL
Trigger: CAATCCTGGAGGTGGAGTGCCTGCCAAGAAGCCCAAAGGTGGGCCCAATGCTTCTAGCTCCTCAGCCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS CAA 72 bp CCTTTGTCTGCAGACAACACTGTCCCAACCCTGGTCTaGCGCGCTCGCAGACACGGCCATATACTCGAGCAC +
Preference number: 6 (lower is better)
Translates to: PLSADNTVPTLV*RARRHGHILEH
Trigger: GTGCTCGAGTATATGGCCGTGTCTGCGAGCGCGCAAGACCAGGGTTGGGACAGTGTTGTCTGCAGACAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS GCA 72 bp CTTTGTCTGCAGACAACACTGTCCCAACCCTGGTCTTaGGCGCTCGCAGACACGGCCATATACTCGAGCACA +
Preference number: 6 (lower is better)
Translates to: LCLQTTLSQPWS*ALADTAIYSST
Trigger: TGTGCTCGAGTATATGGCCGTGTCTGCGAGCGCGCAAGACCAGGGTTGGGACAGTGTTGTCTGCAGACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410016.5
CDS CAA 72 bp ATCTGCTTGCTGATGGTGGCTGAGGAGCTAGAAGCATaGGGCCCACCTTTGGGCTTCTTGGCAGGCACTCCA +
Preference number: 6 (lower is better)
Translates to: ICLLMVAEELEA*GPPLGFLAGTP
Trigger: TGGAGTGCCTGCCAAGAAGCCCAAAGGTGGGCCCAATGCTTCTAGCTCCTCAGCCACCATCAGCAAGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000683222.1
CDS GCA 72 bp CCGCACTGCGGCAAGGCCGTAAATACCTCTAACAGCTaGCTGCCAGCCCAGGGTGAAATACTGTCTTTGTTC +
Preference number: 6 (lower is better)
Translates to: PHCGKAVNTSNS*LPAQGEILSLF
Trigger: GAACAAAGACAGTATTTCACCCTGGGCTGGCAGGCAGCTGTTAGAGGTATTTACGGCCTTGCCGCAGTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CAA 72 bp ACAGTCCTGGGTTTTCATAGTAAGCAGCCTTCTGCATaGTGCACTCAGGAAGCTCCAGGGCCTGCTGACCCT +
Preference number: 6 (lower is better)
Translates to: TVLGFHSKQPSA*CTQEAPGPADP
Trigger: AGGGTCAGCAGGCCCTGGAGCTTCCTGAGTGCACAATGCAGAAGGCTGCTTACTATGAAAACCCAGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS CAA 90 bp AGCCTCCAAACAGTCCTGGGTTTTCATAGTAAGCAGCCTTCTGCATaGTGCACTCAGGAAGCTCCAGGGCCTGCTGACCCTGCTCAAATA +
Preference number: 6 (lower is better)
Translates to: SLQTVLGFHSKQPSA*CTQEAPGPADPAQI
Trigger: TATTTGAGCAGGGTCAGCAGGCCCTGGAGCTTCCTGAGTGCACAATGCAGAAGGCTGCTTACTATGAAAACCCAGGACTGTTTGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS CAA 72 bp GAAGCTCCAGGGCCTGCTGACCCTGCTCAAATAACATaGACTACCACTGTATCCTTCACTGCCACCTCCAAT +
Preference number: 6 (lower is better)
Translates to: EAPGPADPAQIT*TTTVSFTATSN
Trigger: ATTGGAGGTGGCAGTGAAGGATACAGTGGTAGTCAATGTTATTTGAGCAGGGTCAGCAGGCCCTGGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS CAA 72 bp GGATCAGAAATGTCACATCTTGGGCACCGCTTCCCTTaGAGTCGTTCTTCAAGGCGGGGAAAACCATCCTAC +
Preference number: 6 (lower is better)
Translates to: GSEMSHLGHRFP*SRSSRRGKPSY
Trigger: GTAGGATGGTTTTCCCCGCCTTGAAGAACGACTCAAAGGGAAGCGGTGCCCAAGATGTGACATTTCTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS TCA 72 bp TTCTGCATTGTGCACTCAGGAAGCTCCAGGGCCTGCTaGCCCTGCTCAAATAACATTGACTACCACTGTATC +
Preference number: 6 (lower is better)
Translates to: FCIVHSGSSRAC*PCSNNIDYHCI
Trigger: GATACAGTGGTAGTCAATGTTATTTGAGCAGGGTCAGCAGGCCCTGGAGCTTCCTGAGTGCACAATGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS TCA 72 bp GATCAGAAATGTCACATCTTGGGCACCGCTTCCCTTTaGGTCGTTCTTCAAGGCGGGGAAAACCATCCTACA +
Preference number: 6 (lower is better)
Translates to: DQKCHILGTASL*VVLQGGENHPT
Trigger: TGTAGGATGGTTTTCCCCGCCTTGAAGAACGACTCAAAGGGAAGCGGTGCCCAAGATGTGACATTTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 72 bp CTGAAGGTTGTTATGTGGATCAGAAATGTCACATCTTaGGCACCGCTTCCCTTTGAGTCGTTCTTCAAGGCG +
Preference number: 6 (lower is better)
Translates to: LKVVMWIRNVTS*APLPFESFFKA
Trigger: CGCCTTGAAGAACGACTCAAAGGGAAGCGGTGCCCAAGATGTGACATTTCTGATCCACATAACAACCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CAA 72 bp CAAACCCTATTCCGCCGAACAAGCAGCATCTCCTCGTaGCCAATGAACACTCTGAAGGTTGTTATGTGGATC +
Preference number: 6 (lower is better)
Translates to: QTLFRRTSSISS*PMNTLKVVMWI
Trigger: GATCCACATAACAACCTTCAGAGTGTTCATTGGCAACGAGGAGATGCTGCTTGTTCGGCGGAATAGGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CAA 90 bp TTGTTATGTGGATCAGAAATGTCACATCTTGGGCACCGCTTCCCTTaGAGTCGTTCTTCAAGGCGGGGAAAACCATCCTACATCCAGAGA +
Preference number: 6 (lower is better)
Translates to: LLCGSEMSHLGHRFP*SRSSRRGKPSYIQR
Trigger: TCTCTGGATGTAGGATGGTTTTCCCCGCCTTGAAGAACGACTCAAAGGGAAGCGGTGCCCAAGATGTGACATTTCTGATCCACATAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CCA 72 bp CGTAGTTTTGCTGTAGCCATAGCCTCCAAACAGTCCTaGGTTTTCATAGTAAGCAGCCTTCTGCATTGTGCA +
Preference number: 6 (lower is better)
Translates to: RSFAVAIASKQS*VFIVSSLLHCA
Trigger: TGCACAATGCAGAAGGCTGCTTACTATGAAAACCCAGGACTGTTTGGAGGCTATGGCTACAGCAAAACTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249440.4
ENST00000410016.5
ENST00000432796.2
ENST00000683222.1
CDS CAA 90 bp TCTGATTTGCAAACCCTATTCCGCCGAACAAGCAGCATCTCCTCGTaGCCAATGAACACTCTGAAGGTTGTTATGTGGATCAGAAATGTC +
Preference number: 6 (lower is better)
Translates to: SDLQTLFRRTSSISS*PMNTLKVVMWIRNV
Trigger: GACATTTCTGATCCACATAACAACCTTCAGAGTGTTCATTGGCAACGAGGAGATGCTGCTTGTTCGGCGGAATAGGGTTTGCAAATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS GCA 72 bp GCCCAGGGTGAAATACTGTCTTTGTTCGATTTCCCTTaGCTCTCTGATTCAGAAAACAGAACTCTGGCGAAA +
Preference number: 6 (lower is better)
Translates to: AQGEILSLFDFP*LSDSENRTLAK
Trigger: TTTCGCCAGAGTTCTGTTTTCTGAATCAGAGAGGCAAGGGAAATCGAACAAAGACAGTATTTCACCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS CAA 72 bp AAACATGTATTAAAAGCTTCAACTGTCCTTTCTGATTaGCAAACCCTATTCCGCCGAACAAGCAGCATCTCC +
Preference number: 6 (lower is better)
Translates to: KHVLKASTVLSD*QTLFRRTSSIS
Trigger: GGAGATGCTGCTTGTTCGGCGGAATAGGGTTTGCAAATCAGAAAGGACAGTTGAAGCTTTTAATACATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459979.2
CDS TCA 72 bp AACAGAACTCTGGCGAAATTTATTTGTAGAAACATCTaGCGGGAAAATACGCTTTGTTTTCAGCTCTCGTGC +
Preference number: 6 (lower is better)
Translates to: NRTLAKFICRNI*RENTLCFQLSC
Trigger: GCACGAGAGCTGAAAACAAAGCGTATTTTCCCGTCAGATGTTTCTACAAATAAATTTCGCCAGAGTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459979.2