Pregenerated sensors for HOXD13 (Homo sapiens)
Ensembl gene IDs: ENSG00000128714Ensembl transcript IDs: ENST00000392539.4
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTTCCCACCCACGGCCACATTGATTCAGCCTCTTTTTGAGGATTaGGGAGATGACCACAATCCCAGACCCATAGATCCAAGGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: KFPPTATLIQPLFED*GDDHNPRPIDPRPR Trigger: TCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTCATCTCCTCAATCCTCAAAAAGAGGCTGAATCAATGTGGCCGTGGGTGGGAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR GCA 90 bp | AGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTaGAGCCATTTAAATGTCTGCATTGAGAGCTCAAGAAATGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: RKGGAFMPSAGHSTD*SHLNVCIESSRNEG Trigger: GCCTTCATTTCTTGAGCTCTCAATGCAGACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCCCCAGAGCACTGCCTaGCTTTCCACTTGCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: PRKGGAFMPSAGHSTDCSPQSTA*LSTCLR Trigger: CCTGAGGCAAGTGGAAAGGCAGGCAGTGCTCTGGGG...GCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR GCA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCAGCCTGCCTTTCCACTTaGCTCAGGGCAACTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: THRSKAKKRRCIYAIRGSACLST*LRATAE Trigger: CTCAGCAGTTGCCCTGAGGCAAGTGGAAAGGCAGGC...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR TCA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCATTTAGACTTTCTCGGTaGCCCCAGAGCACTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: THRSKAKKRRCIYAIRGSFRLSR*PQSTAC Trigger: GCAGGCAGTGCTCTGGGGTCACCGAGAAAGTCTAAA...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR CAA 90 bp | ACAGCTCCATGCGAGGCCCCCTTGTTTAGACAGTCAAGTTCTTCATaGGGTTCTGTATGTAAGTTCCCACCCACGGCCACATTGATTCAG | + |
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Preference number: 2 (lower is better) Translates to: TAPCEAPLFRQSSSS*GSVCKFPPTATLIQ Trigger: CTGAATCAATGTGGCCGTGGGTGGGAACTTACATACAGAACCCAATGAAGAACTTGACTGTCTAAACAAGGGGGCCTCGCATGGAGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR TCA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCAGGCATCCACGATCCATaGGGACACATGAGTTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: THRSKAKKRRCIYAIRGSGIHDP*GHMSFK Trigger: TTTGAAACTCATGTGTCCTCATGGATCGTGGATGCC...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCATTTCCAAAGGCCTTTTaGAGACAACCGAATGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: THRSKAKKRRCIYAIRGSFPKAF*RQPNGF Trigger: GAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAA...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR GCA 90 bp | CATCACAGTACCTTCAGCCTCCTGTTTTTAGACTTTCTCGGTGACCCCAGAGCAACAATTCACAAAATTTaGCACCATTGGCAGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: HHSTFSLLFLDFLGDPRATIHKI*HHWQGV Trigger: CACCCCCTGCCAATGGTGGCAAATTTTGTGAATTGT...TGCTCTGGGGTCACCGAGAAAGTCTAAAAACAGGAGGCTGAAGGTACTGTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR CCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGTTGGAGACAACCGAATaGCTTCTAAGCTGTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMLETTE*LLSCLW Trigger: CCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAA...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTACCTCAGGGCAACTGCTaGGAGCTAATGATTCAATTA | + |
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Preference number: 2 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLPQGNC*ELMIQL Trigger: TAATTGAATCATTAGCTCTCAGCAGTTGCCCTGAGG...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR TCA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACCTAATTACAGGATATaGACGACTGAAAACCATTCT | + |
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Preference number: 2 (lower is better) Translates to: THRSKAKKRRCIYAIRGSPNYRI*TTENHS Trigger: AGAATGGTTTTCAGTCGTTCATATCCTGTAATTAGG...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR CCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGACTACAAAGTCAGGTTaGGCAGCAGAAGGTTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMTTKSG*AAEGFR Trigger: TCTAAAACCTTCTGCTGCCCAACCTGACTTTGTAGT...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTACAGGATATGAACGACTaGAAACCATTCTGTCCTAAT | + |
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Preference number: 2 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLQDMND*KPFCPN Trigger: ATTAGGACAGAATGGTTTTCAGTCGTTCATATCCTG...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR CCA 72 bp | GCGAGGCCCCCTTGTTTAGACAGTCAAGTTCTTCATTaGGTTCTGTATGTAAGTTCCCACCCACGGCCACAT | + |
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Preference number: 3 (lower is better) Translates to: ARPPCLDSQVLH*VLYVSSHPRPH Trigger: ATGTGGCCGTGGGTGGGAACTTACATACAGAACCCAATGAAGAACTTGACTGTCTAAACAAGGGGGCCTCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR CCA 72 bp | TCAAGTCTTTCCAAAGGCCTTTTGGAGACAACCGAATaGCTTCTAAGCTGTCTGTGGCCAACCTGGACCACA | + |
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Preference number: 3 (lower is better) Translates to: SSLSKGLLETTE*LLSCLWPTWTT Trigger: TGTGGTCCAGGTTGGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR-3UTR CAA 90 bp | CCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCAACAATTCACAAAATTaGCCACCATTGGCAGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: PRKGGAFMPSAGHSTDCSNNSQN*PPLAGG Trigger: ACCCCCTGCCAATGGTGGCAAATTTTGTGAATTGTT...GCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR TCA 72 bp | CACTGCCTGCCTTTCCACTTGCCTCAGGGCAACTGCTaGGAGCTAATGATTCAATTACCTAATTACAGGATA | + |
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Preference number: 3 (lower is better) Translates to: HCLPFHLPQGNC*ELMIQLPNYRI Trigger: TATCCTGTAATTAGGTAATTGAATCATTAGCTCTCAGCAGTTGCCCTGAGGCAAGTGGAAAGGCAGGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR GCA 72 bp | GCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCTaGATTGAGAGCTCAAGAAATGAAGGCATCCACGAT | + |
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Preference number: 3 (lower is better) Translates to: AGHSTDCSHLNV*IESSRNEGIHD Trigger: ATCGTGGATGCCTTCATTTCTTGAGCTCTCAATGCAGACATTTAAATGGCTGCAATCAGTAGAGTGACCCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR TCA 72 bp | ATTGAGAGCTCAAGAAATGAAGGCATCCACGATCCATaGGGACACATGAGTTTCAAATTAAAGATTATGAAA | + |
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Preference number: 3 (lower is better) Translates to: IESSRNEGIHDP*GHMSFKLKIMK Trigger: TTTCATAATCTTTAATTTGAAACTCATGTGTCCTCATGGATCGTGGATGCCTTCATTTCTTGAGCTCTCAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | CCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCGCCGCCCGCCCCGAATaGGTCCCGGCGAACACAGGC | + |
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Preference number: 4 (lower is better) Translates to: PRKGGAFMPSAGHSTDCSAARPE*VPANTG Trigger: GCCTGTGTTCGCCGGGACGCATTCGGGGCGGGCGGC...GCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACGCTGCAGCGGCCGCTaGAGGCGTGGGTGCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: THRSKAKKRRCIYAIRGSRCSGR*RRGCWA Trigger: TGCCCAGCACCCACGCCTGCAGCGGCCGCTGCAGCG...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | CATCACAGTACCTTCAGCCTCCTGTTTTTAGACTTTCTCGGTGACCCCAGAGCACCCTCTCTCCCTCTGTaGGCCTCCCGCCTCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: HHSTFSLLFLDFLGDPRAPSLPL*ASRLRP Trigger: GGGCCGGAGGCGGGAGGCTCACAGAGGGAGAGAGGG...TGCTCTGGGGTCACCGAGAAAGTCTAAAAACAGGAGGCTGAAGGTACTGTGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | TCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTGGCCAGAAAGCCGCGGCACTaGCCTGACGCCGCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SFQRPFGDNRMASKLSVARKPRH*PDAAAA Trigger: GGCGGCGGCGGCGTCAGGCCAGTGCCGCGGCTTTCT...GGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | CCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCGTTGGCCGGTACGCTaGTGCTCGCCAGGCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: PRKGGAFMPSAGHSTDCSRWPVR*CSPGLT Trigger: TGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCAACG...GCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGTGGGCACTCTTTGGCTaGGGGAGCCTCCGGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMWALFG*GSLRAR Trigger: GCGCGCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCA...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | TCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTGGCCACGAGGAAGAGCCCGTaGGCTCAGAGGTCCCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SFQRPFGDNRMASKLSVATRKSP*AQRSRG Trigger: ACCCCGGGACCTCTGAGCGCACGGGCTCTTCCTCGT...GGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGGTGCTGGGCACTCTTTaGCTGGGGGAGCCTCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMVLGTL*LGEPPG Trigger: GCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCAGCAC...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCCGGCCGCTGCAGGCGTaGGTGCTGGGCACTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVRPLQA*VLGTLW Trigger: CCAAAGAGTGCCCAGCACCCACGCCTGCAGCGGCCG...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGGCGCTGGCACCTCGTTaGCCGGTACGCTGCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMALAPR*PVRCCS Trigger: CGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGC...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | TATTCAAGTCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCGCCGCCGCCACCGATaGGGAGGAGGAAGAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: YSSLSKGLLETTEWLLSCRRRHR*GGGRGR Trigger: CCGGCCTCTTCCTCCTCCTCATCGGTGGCGGCGGCG...ACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGACTTGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCCGCTGCAGGCGTGGGTaGTGGGCACTCTTTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVRCRRG*WALFGW Trigger: CCAGCCAAAGAGTGCCCAGCACCCACGCCTGCAGCG...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCCCTCCCAGCGAGGCGTaGGGCGATGACTTGAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVPPSEA*GDDLSA Trigger: TGCGCTCAAGTCATCGCCGCACGCCTCGCTGGGAGG...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGTGGCCGGTACGCTGCTaGTCGCCAGGCCTGACACGT | + |
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Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMWPVRC*SPGLTR Trigger: ACGTGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCA...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCTCCTTGGCTCGCGCTaGCACCTCGTTGGCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMLLGSR*HLVGRY Trigger: GTACCGGCCAACGAGGTGCCAGCGCGAGCCAAGGAG...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | CCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCTGGGACCCCTGTGGCTaGTCCTTGGTGCAGTACACC | + |
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Preference number: 4 (lower is better) Translates to: PRKGGAFMPSAGHSTDCSWDPCG*SLVQYT Trigger: GGTGTACTGCACCAAGGACCAGCCACAGGGGTCCCA...GCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCCGAGGCGTGCGGCGATaGCTTGAGCGCATTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVRGVRR*LERILL Trigger: CAGCAGAATGCGCTCAAGTCATCGCCGCACGCCTCG...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | CCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCGACTTGAGCGCATTCTaGTGTAAGCCCACGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: PRKGGAFMPSAGHSTDCSDLSAF*CKPTPC Trigger: GCACGGCGTGGGCTTACAGCAGAATGCGCTCAAGTC...GCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | CCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCGCCTGCCTTTCCACTTaGCTCAGGGCAACTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PRKGGAFMPSAGHSTDCSACLST*LRATAE Trigger: CTCAGCAGTTGCCCTGAGGCAAGTGGAAAGGCAGGC...GCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | CATCACAGTACCTTCAGCCTCCTGTTTTTAGACTTTCTCGGTGACCCCAGAGCACGTGCGGCGATGACTTaGGCGCATTCTGCTGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: HHSTFSLLFLDFLGDPRARAAMT*AHSAVS Trigger: GCTTACAGCAGAATGCGCTCAAGTCATCGCCGCACG...TGCTCTGGGGTCACCGAGAAAGTCTAAAAACAGGAGGCTGAAGGTACTGTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | CCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCACGCACATGTCCGGCTaGTTTAGAGCCACATCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PRKGGAFMPSAGHSTDCSTHMSG*FRATSP Trigger: AGGGGATGTGGCTCTAAATCAGCCGGACATGTGCGT...GCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | CCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCAGCTGTAGTAGCCGTTaGCGAAGTGGTAGCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PRKGGAFMPSAGHSTDCSSCSSR*RSGSRS Trigger: GCTACGGCTACCACTTCGGCAACGGCTACTACAGCT...GCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTACCTCTCCTTTCTCTCTaGTTCGCTCGCTCCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLPLLSL*FARSRP Trigger: AGGGCGGGAGCGAGCGAACCAGAGAGAAAGGAGAGG...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | CATCACAGTACCTTCAGCCTCCTGTTTTTAGACTTTCTCGGTGACCCCAGAGCAAGAAGGATACCTCCTTaGCTCGCGCTGGCACCTCGT | + |
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Preference number: 4 (lower is better) Translates to: HHSTFSLLFLDFLGDPRARRIPP*LALAPR Trigger: ACGAGGTGCCAGCGCGAGCCAAGGAGGTATCCTTCT...TGCTCTGGGGTCACCGAGAAAGTCTAAAAACAGGAGGCTGAAGGTACTGTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAGCCAGCGTCCAGGACTaGTACCCCTCCATGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLASVQD*YPSMEM Trigger: CATCTCCATGGAGGGGTACCAGTCCTGGACGCTGGC...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAGTGGCTGGTCCTTGGTaGAGTACACCTGGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLVAGPW*STPGCS Trigger: GGAACAGCCAGGTGTACTGCACCAAGGACCAGCCAC...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCGTGACCCCAGAGCACTaGCTGCCTTTCCACTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVVTPEH*LPFHLP Trigger: AGGCAAGTGGAAAGGCAGGCAGTGCTCTGGGGTCAC...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCACTGGTACCCCTCCATaGAGATGTAGGCCTCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVTGTPP*RCRPRA Trigger: GGCACGAGGCCTACATCTCCATGGAGGGGTACCAGT...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGTTTAGACTTTCTCGGTaGCCCCAGAGCACTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMFRLSR*PQSTAC Trigger: GCAGGCAGTGCTCTGGGGTCACCGAGAAAGTCTAAA...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | CATCACAGTACCTTCAGCCTCCTGTTTTTAGACTTTCTCGGTGACCCCAGAGCACACCCACGGCCACATTaGTTCAGCCTCTTTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHSTFSLLFLDFLGDPRAHPRPH*FSLFLR Trigger: CCTCAAAAAGAGGCTGAATCAATGTGGCCGTGGGTG...TGCTCTGGGGTCACCGAGAAAGTCTAAAAACAGGAGGCTGAAGGTACTGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCATGCTTTACAGCTCCATaGGAGGCCCCCTTGTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: THRSKAKKRRCIYAIRGSCFTAP*EAPLFR Trigger: TCTAAACAAGGGGGCCTCGCATGGAGCTGTAAAGCA...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTACCCCGGAGCCGAAAGTaGACACCATGTCGATATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLPRSRK*TPCRYS Trigger: GCTATATCGACATGGTGTCCACTTTCGGCTCCGGGG...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCTTGGTGCAGTACACCTaGCTGTTCCACCCGTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVLVQYT*LFHPLA Trigger: GGCTAACGGGTGGAACAGCCAGGTGTACTGCACCAA...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAAAGTGGGACCCCTGTaGCTGGTCCTTGGTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLKVGPL*LVLGAV Trigger: TACTGCACCAAGGACCAGCCACAGGGGTCCCACTTT...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| 3UTR CAA 72 bp | TGCGAGGCCCCCTTGTTTAGACAGTCAAGTTCTTCATaGGGTTCTGTATGTAAGTTCCCACCCACGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CEAPLFRQSSSS*GSVCKFPPTAT Trigger: TGTGGCCGTGGGTGGGAACTTACATACAGAACCCAATGAAGAACTTGACTGTCTAAACAAGGGGGCCTCGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | TATTCAAGTCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTGCTGCTCGCCAGGCCTaGCACGTCCATGTACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSSLSKGLLETTEWLLSCAARQA*HVHVLL Trigger: GAGAAGTACATGGACGTGTCAGGCCTGGCGAGCAGC...ACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGACTTGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | TCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTGGCCAAGGAGGTGCATTTATaGCATCCGCGGGTCACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SFQRPFGDNRMASKLSVAKEVHL*HPRVTL Trigger: TAGAGTGACCCGCGGATGGCATAAATGCACCTCCTT...GGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGGCCAAGAAAAGGAGGTaGATTTATGCCATCCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMAKKRR*IYAIRG Trigger: CCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGC...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGGAAGATTTCCAAAAGTaGGACCCCTGTGGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMEDFQK*DPCGWS Trigger: GGACCAGCCACAGGGGTCCCACTTTTGGAAATCTTC...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGTGTCTGTGGCCAACCTaGACCACATCAGGAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMCLWPT*TTSGDS Trigger: ACTGTCTCCTGATGTGGTCCAGGTTGGCCACAGACA...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | CATCACAGTACCTTCAGCCTCCTGTTTTTAGACTTTCTCGGTGACCCCAGAGCACGCGGGTCACTCTACTaGTTGCAGCCATTTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HHSTFSLLFLDFLGDPRARGSLY*LQPFKC Trigger: ACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCG...TGCTCTGGGGTCACCGAGAAAGTCTAAAAACAGGAGGCTGAAGGTACTGTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCATTCACTCTTCGGTTCTaGAACCAAATGGTCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: THRSKAKKRRCIYAIRGSFTLRF*NQMVTC Trigger: ACAAGTGACCATTTGGTTTCAGAACCGAAGAGTGAA...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAGGCATCCACGATCCATaGGGACACATGAGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLGIHDP*GHMSFK Trigger: TTTGAAACTCATGTGTCCTCATGGATCGTGGATGCC...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTACCTCTTTTTGAGGATTaGGGAGATGACCACAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLPLFED*GDDHNP Trigger: GGGATTGTGGTCATCTCCTCAATCCTCAAAAAGAGG...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | TCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTGGCCACAATTCACAAAATTTaGCACCATTGGCAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFQRPFGDNRMASKLSVATIHKI*HHWQGV Trigger: CACCCCCTGCCAATGGTGGCAAATTTTGTGAATTGT...GGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCACAGGATATGAACGACTaGAAACCATTCTGTCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: THRSKAKKRRCIYAIRGSQDMND*KPFCPN Trigger: ATTAGGACAGAATGGTTTTCAGTCGTTCATATCCTG...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTATTTCCAAAGGCCTTTTaGAGACAACCGAATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLFPKAF*RQPNGF Trigger: GAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAA...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCCAAGTCCCTTTATACTaGCCTGGAGGGAGAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVQVPLY*PGGRNK Trigger: TTTGTTTCTCCCTCCAGGCCAGTATAAAGGGACTTG...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | TATTCAAGTCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTTCTAAGCTGTCTGTaGCCAACCTGGACCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: YSSLSKGLLETTEWLLSCLLSCL*PTWTTS Trigger: TGATGTGGTCCAGGTTGGCCACAGACAGCTTAGAAG...ACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGACTTGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | TATTCAAGTCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTAAATGTCTGAAGCACTaGCCATGTATCCCAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YSSLSKGLLETTEWLLSCKCLKH*PCIPAH Trigger: GTGAGCTGGGATACATGGGCAGTGCTTCAGACATTT...ACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGACTTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | TATTCAAGTCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTTTGGAGACAACCGAATaGCTTCTAAGCTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSSLSKGLLETTEWLLSCLETTE*LLSCLW Trigger: CCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAA...ACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGACTTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | TCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTGGCCAAGAGTTCTGTTTATTaGCATCTCCCTAGGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFQRPFGDNRMASKLSVAKSSVY*HLPRSK Trigger: TTTACTCCTAGGGAGATGCCAATAAACAGAACTCTT...GGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCCCTAATTACAGGATATaGACGACTGAAAACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVPNYRI*TTENHS Trigger: AGAATGGTTTTCAGTCGTTCATATCCTGTAATTAGG...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR GCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGTTCATATTTGTTAGATaGTTTACAGCTCCATGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMFIFVR*FTAPCE Trigger: CTCGCATGGAGCTGTAAAGCATCTAACAAATATGAA...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGAGTCAAGTTCTTCATTaGGTTCTGTATGTAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMSQVLH*VLYVSS Trigger: GGAACTTACATACAGAACCCAATGAAGAACTTGACT...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CCA 90 bp | TATTCAAGTCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTACTACAAAGTCAGGTTaGGCAGCAGAAGGTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: YSSLSKGLLETTEWLLSCTTKSG*AAEGFR Trigger: TCTAAAACCTTCTGCTGCCCAACCTGACTTTGTAGT...ACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGACTTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR TCA 90 bp | TATTCAAGTCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTAGGAGACAGTATCTTTaGGCTTGGAGACAATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSSLSKGLLETTEWLLSCRRQYL*AWRQFS Trigger: AGAAAATTGTCTCCAAGCTCAAAGATACTGTCTCCT...ACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGACTTGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 90 bp | GCCGTAGCCCAGCGCTGGAGCGCTCGGGGGCGCTGCAGCGGCCGCTaGAGGCGTGGGTGCTGGGCACTCTTTGGCTGGGGGAGCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AVAQRWSARGRCSGR*RRGCWALFGWGSLR Trigger: CCGGAGGCTCCCCCAGCCAAAGAGTGCCCAGCACCCACGCCTGCAGCGGCCGCTGCAGCGCCCCCGAGCGCTCCAGCGCTGGGCTACGGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 90 bp | GCCGAAGTGGTAGCCGTAGCCCAGCGCTGGAGCGCTCGGGGGCGCTaGAGCGGCCGCTGCAGGCGTGGGTGCTGGGCACTCTTTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AEVVAVAQRWSARGR*SGRCRRGCWALFGW Trigger: CCAGCCAAAGAGTGCCCAGCACCCACGCCTGCAGCGGCCGCTGCAGCGCCCCCGAGCGCTCCAGCGCTGGGCTACGGCTACCACTTCGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 90 bp | CGCTGCAGCGGCCGCTGCAGGCGTGGGTGCTGGGCACTCTTTGGCTaGGGGAGCCTCCGGGCGCGCCGCTACAACGGCAGAAGAGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: RCSGRCRRGCWALFG*GSLRARRYNGRRGR Trigger: TCGTCCTCTTCTGCCGTTGTAGCGGCGCGCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCAGCACCCACGCCTGCAGCGGCCGCTGCAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 90 bp | GCGCCGCTACAACGGCAGAAGAGGACGACGACGAGGAAGAGCCCGTaGGCTCAGAGGTCCCGGGGTACGCAAAGCCGGAGGCTGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: APLQRQKRTTTRKSP*AQRSRGTQSRRLPP Trigger: CGGCGGCAGCCTCCGGCTTTGCGTACCCCGGGACCTCTGAGCGCACGGGCTCTTCCTCGTCGTCGTCCTCTTCTGCCGTTGTAGCGGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS TCA 90 bp | TCGCGCTGGCACCTCGTTGGCCGGTACGCTGCTGCTCGCCAGGCCTaGCACGTCCATGTACTTCTCCACGGGAAAGCCTCCCAGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRWHLVGRYAAARQA*HVHVLLHGKASQRG Trigger: GCCTCGCTGGGAGGCTTTCCCGTGGAGAAGTACATGGACGTGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS TCA 90 bp | ACTTCTCCACGGGAAAGCCTCCCAGCGAGGCGTGCGGCGATGACTTaGGCGCATTCTGCTGTAAGCCCACGCCGTGCGACATACGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPRESLPARRAAMT*AHSAVSPRRATYGS Trigger: GCTGCCGTATGTCGCACGGCGTGGGCTTACAGCAGAATGCGCTCAAGTCATCGCCGCACGCCTCGCTGGGAGGCTTTCCCGTGGAGAAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 90 bp | ATACCTCCTTGGCTCGCGCTGGCACCTCGTTGGCCGGTACGCTGCTaGTCGCCAGGCCTGACACGTCCATGTACTTCTCCACGGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPPWLALAPRWPVRC*SPGLTRPCTSPRES Trigger: GCTTTCCCGTGGAGAAGTACATGGACGTGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCAAGGAGGTAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 90 bp | AGGATACCTCCTTGGCTCGCGCTGGCACCTCGTTGGCCGGTACGCTaGTGCTCGCCAGGCCTGACACGTCCATGTACTTCTCCACGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RIPPWLALAPRWPVR*CSPGLTRPCTSPRE Trigger: TTCCCGTGGAGAAGTACATGGACGTGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCAAGGAGGTATCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 90 bp | AGCCCTGGTAGAAGGATACCTCCTTGGCTCGCGCTGGCACCTCGTTaGCCGGTACGCTGCTGCTCGCCAGGCCTGACACGTCCATGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SPGRRIPPWLALAPR*PVRCCSPGLTRPCT Trigger: AGTACATGGACGTGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCAAGGAGGTATCCTTCTACCAGGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 90 bp | CGTGCTGGTAAGGGCTCGTATAGCCCTGGTAGAAGGATACCTCCTTaGCTCGCGCTGGCACCTCGTTGGCCGGTACGCTGCTGCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAGKGSYSPGRRIPP*LALAPRWPVRCCSP Trigger: TGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCAAGGAGGTATCCTTCTACCAGGGCTATACGAGCCCTTACCAGCACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 90 bp | CCATGGAGATGTAGGCCTCGTGCCGAGGCTCCCCGGAGCCGAAAGTaGACACCATGTCGATATAGCCGGGCACGTGCTGGTAAGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PWRCRPRAEAPRSRK*TPCRYSRARAGKGS Trigger: CGAGCCCTTACCAGCACGTGCCCGGCTATATCGACATGGTGTCCACTTTCGGCTCCGGGGAGCCTCGGCACGAGGCCTACATCTCCATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 90 bp | GACACGTCCATGTACTTCTCCACGGGAAAGCCTCCCAGCGAGGCGTaGGGCGATGACTTGAGCGCATTCTGCTGTAAGCCCACGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DTSMYFSTGKPPSEA*GDDLSAFCCKPTPC Trigger: GCACGGCGTGGGCTTACAGCAGAATGCGCTCAAGTCATCGCCGCACGCCTCGCTGGGAGGCTTTCCCGTGGAGAAGTACATGGACGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | CATCACAGTACCTTCAGCCTCCTGTTTTTAGACTTTCTCGGTGACCCCAGAGCACGCGCTGGCACCTCGTaGGCCGGTACGCTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HHSTFSLLFLDFLGDPRARAGTS*AGTLLL Trigger: GAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCG...TGCTCTGGGGTCACCGAGAAAGTCTAAAAACAGGAGGCTGAAGGTACTGTGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCGGTGCTGGGCACTCTTaGGCTGGGGGAGCCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVGAGHS*AGGASG Trigger: CCCGGAGGCTCCCCCAGCCAAAGAGTGCCCAGCACC...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCGCGTGCGGCGATGACTaGAGCGCATTCTGCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVACGDD*SAFCCK Trigger: CTTACAGCAGAATGCGCTCAAGTCATCGCCGCACGC...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 90 bp | TCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTaGCCAACCTGGACCACATCAGGAGACAGTATCTTTGAGCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: SKGLLETTEWLLSCL*PTWTTSGDSIFELG Trigger: TCCAAGCTCAAAGATACTGTCTCCTGATGTGGTCCAGGTTGGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | AAAGGAGGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTACCACCCACGGCCACATaGATTCAGCCTCTTTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: KGGAFMPSAGHSTDCSHLPPTAT*IQPLFE Trigger: CTCAAAAAGAGGCTGAATCAATGTGGCCGTGGGTGG...TAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | GGTGCATTTATGCCATCCGCGGGTCACTCTACTGATTGCAGCCATTTAAATGTCCCATGCGAGGCCCCCTaGTTTAGACAGTCAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GAFMPSAGHSTDCSHLNVPCEAP*FRQSSS Trigger: AGAACTTGACTGTCTAAACAAGGGGGCCTCGCATGG...GACATTTAAATGGCTGCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | CATCACAGTACCTTCAGCCTCCTGTTTTTAGACTTTCTCGGTGACCCCAGAGCAGAGATACGCCGCCGCTaGTCCTTGTTAATGAATTTG | + |
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Preference number: 5 (lower is better) Translates to: HHSTFSLLFLDFLGDPRAEIRRR*SLLMNL Trigger: CAAATTCATTAACAAGGACAAGCGGCGGCGTATCTC...TGCTCTGGGGTCACCGAGAAAGTCTAAAAACAGGAGGCTGAAGGTACTGTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | ACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCCATCCGCGGGTCAAACAATTCACAAAATTaGCCACCATTGGCAGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: THRSKAKKRRCIYAIRGSNNSQN*PPLAGG Trigger: ACCCCCTGCCAATGGTGGCAAATTTTGTGAATTGTT...TGACCCGCGGATGGCATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTGGCCCGCCGCCGCTTGTCCTaGTTAATGAATTTGTTAATG | + |
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Preference number: 5 (lower is better) Translates to: SFQRPFGDNRMASKLSVARRRLS*LMNLLM Trigger: CATTAACAAATTCATTAACAAGGACAAGCGGCGGCG...GGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCTTTCCAAAGGCCTTTaGGAGACAACCGAATGGCTT | + |
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Preference number: 5 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMLSKGL*ETTEWL Trigger: AAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAG...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 90 bp | CTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTGGCCAACCTaGACCACATCAGGAGACAGTATCTTTGAGCTTGGAGACAATTTT | + |
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Preference number: 5 (lower is better) Translates to: LLETTEWLLSCLWPT*TTSGDSIFELGDNF Trigger: AAAATTGTCTCCAAGCTCAAAGATACTGTCTCCTGATGTGGTCCAGGTTGGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 90 bp | AATACATATTCAAGTCTTTCCAAAGGCCTTTTGGAGACAACCGAATaGCTTCTAAGCTGTCTGTGGCCAACCTGGACCACATCAGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: NTYSSLSKGLLETTE*LLSCLWPTWTTSGD Trigger: GTCTCCTGATGTGGTCCAGGTTGGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGACTTGAATATGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCCAAAGGCCTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTGGCCACAGTATCTTTGAGCTaGGAGACAATTTTCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SFQRPFGDNRMASKLSVATVSLS*ETIFLS Trigger: GGACAAGAAAATTGTCTCCAAGCTCAAAGATACTGT...GGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAGGCCTTTGGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS-3UTR CAA 90 bp | GACCACAATCCCAGACCCATAGATCCAAGGCCAAGAAAAGGAGGTGCATTTATGCAGTCAAGTTCTTCATaGGGTTCTGTATGTAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: DHNPRPIDPRPRKGGAFMQSSSS*GSVCKF Trigger: GAACTTACATACAGAACCCAATGAAGAACTTGACTG...CATAAATGCACCTCCTTTTCTTGGCCTTGGATCTATGGGTCTGGGATTGTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 72 bp | GCAGCCGCCGCTGCCGCCGCCGCCGCCCGCCCCGAATaGGTCCCGGCGAACACAGGCGCGGAGAGAAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: AAAAAAAAARPE*VPANTGAERKP Trigger: CGGCTTTCTCTCCGCGCCTGTGTTCGCCGGGACGCATTCGGGGCGGGCGGCGGCGGCGGCAGCGGCGGCTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 72 bp | CAGCGCTGGAGCGCTCGGGGGCGCTGCAGCGGCCGCTaGAGGCGTGGGTGCTGGGCACTCTTTGGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: QRWSARGRCSGR*RRGCWALFGWG Trigger: CCCCCAGCCAAAGAGTGCCCAGCACCCACGCCTGCAGCGGCCGCTGCAGCGCCCCCGAGCGCTCCAGCGCTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CAA 72 bp | GCAGCGGCCGCTGCAGGCGTGGGTGCTGGGCACTCTTaGGCTGGGGGAGCCTCCGGGCGCGCCGCTACAACG | + |
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Preference number: 6 (lower is better) Translates to: AAAAAGVGAGHS*AGGASGRAATT Trigger: CGTTGTAGCGGCGCGCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCAGCACCCACGCCTGCAGCGGCCGCTGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CAA 90 bp | GGGGGCGCTGCAGCGGCCGCTGCAGGCGTGGGTGCTGGGCACTCTTaGGCTGGGGGAGCCTCCGGGCGCGCCGCTACAACGGCAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: GGAAAAAAGVGAGHS*AGGASGRAATTAEE Trigger: CTCTTCTGCCGTTGTAGCGGCGCGCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCAGCACCCACGCCTGCAGCGGCCGCTGCAGCGCCCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 72 bp | GGCCGCTGCAGGCGTGGGTGCTGGGCACTCTTTGGCTaGGGGAGCCTCCGGGCGCGCCGCTACAACGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GRCRRGCWALFG*GSLRARRYNGR Trigger: TCTGCCGTTGTAGCGGCGCGCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCAGCACCCACGCCTGCAGCGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 72 bp | GTAGCCGTTGCCGAAGTGGTAGCCGTAGCCCAGCGCTaGAGCGCTCGGGGGCGCTGCAGCGGCCGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VAVAEVVAVAQR*SARGRCSGRCR Trigger: CCTGCAGCGGCCGCTGCAGCGCCCCCGAGCGCTCCAGCGCTGGGCTACGGCTACCACTTCGGCAACGGCTAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 72 bp | CAACGGCAGAAGAGGACGACGACGAGGAAGAGCCCGTaGGCTCAGAGGTCCCGGGGTACGCAAAGCCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QRQKRTTTRKSP*AQRSRGTQSRR Trigger: CCTCCGGCTTTGCGTACCCCGGGACCTCTGAGCGCACGGGCTCTTCCTCGTCGTCGTCCTCTTCTGCCGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS TCA 72 bp | CGGGAAAGCCTCCCAGCGAGGCGTGCGGCGATGACTTaGGCGCATTCTGCTGTAAGCCCACGCCGTGCGACA | + |
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Preference number: 6 (lower is better) Translates to: RESLPARRAAMT*AHSAVSPRRAT Trigger: TGTCGCACGGCGTGGGCTTACAGCAGAATGCGCTCAAGTCATCGCCGCACGCCTCGCTGGGAGGCTTTCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 72 bp | CCCAGCGAGGCGTGCGGCGATGACTTGAGCGCATTCTaGTGTAAGCCCACGCCGTGCGACATACGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSEACGDDLSAF*CKPTPCDIRQL Trigger: CAGCTGCCGTATGTCGCACGGCGTGGGCTTACAGCAGAATGCGCTCAAGTCATCGCCGCACGCCTCGCTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 72 bp | TGGCTCGCGCTGGCACCTCGTTGGCCGGTACGCTGCTaGTCGCCAGGCCTGACACGTCCATGTACTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: WLALAPRWPVRC*SPGLTRPCTSP Trigger: TGGAGAAGTACATGGACGTGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 72 bp | CCTTGGCTCGCGCTGGCACCTCGTTGGCCGGTACGCTaGTGCTCGCCAGGCCTGACACGTCCATGTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: PWLALAPRWPVR*CSPGLTRPCTS Trigger: AGAAGTACATGGACGTGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCAAGG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CAA 72 bp | ACGGGAAAGCCTCCCAGCGAGGCGTGCGGCGATGACTaGAGCGCATTCTGCTGTAAGCCCACGCCGTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: TGKPPSEACGDD*SAFCCKPTPCD Trigger: GTCGCACGGCGTGGGCTTACAGCAGAATGCGCTCAAGTCATCGCCGCACGCCTCGCTGGGAGGCTTTCCCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS TCA 72 bp | CACCTCGTTGGCCGGTACGCTGCTGCTCGCCAGGCCTaGCACGTCCATGTACTTCTCCACGGGAAAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: HLVGRYAAARQA*HVHVLLHGKAS Trigger: GGAGGCTTTCCCGTGGAGAAGTACATGGACGTGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCAACGAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 72 bp | ATAGCCCTGGTAGAAGGATACCTCCTTGGCTCGCGCTaGCACCTCGTTGGCCGGTACGCTGCTGCTCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: IALVEGYLLGSR*HLVGRYAAARQ Trigger: CTGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCAAGGAGGTATCCTTCTACCAGGGCTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 72 bp | TGTAGGCCTCGTGCCGAGGCTCCCCGGAGCCGAAAGTaGACACCATGTCGATATAGCCGGGCACGTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CRPRAEAPRSRK*TPCRYSRARAG Trigger: ACCAGCACGTGCCCGGCTATATCGACATGGTGTCCACTTTCGGCTCCGGGGAGCCTCGGCACGAGGCCTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CAA 90 bp | TACTTCTCCACGGGAAAGCCTCCCAGCGAGGCGTGCGGCGATGACTaGAGCGCATTCTGCTGTAAGCCCACGCCGTGCGACATACGGCAG | + |
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Preference number: 6 (lower is better) Translates to: YFSTGKPPSEACGDD*SAFCCKPTPCDIRQ Trigger: CTGCCGTATGTCGCACGGCGTGGGCTTACAGCAGAATGCGCTCAAGTCATCGCCGCACGCCTCGCTGGGAGGCTTTCCCGTGGAGAAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 72 bp | AAGGGCTCGTATAGCCCTGGTAGAAGGATACCTCCTTaGCTCGCGCTGGCACCTCGTTGGCCGGTACGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KGSYSPGRRIPP*LALAPRWPVRC Trigger: GCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCAAGGAGGTATCCTTCTACCAGGGCTATACGAGCCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS GCA 72 bp | ATGTACTTCTCCACGGGAAAGCCTCCCAGCGAGGCGTaGGGCGATGACTTGAGCGCATTCTGCTGTAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: MYFSTGKPPSEA*GDDLSAFCCKP Trigger: GGGCTTACAGCAGAATGCGCTCAAGTCATCGCCGCACGCCTCGCTGGGAGGCTTTCCCGTGGAGAAGTACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CCA 72 bp | CTTTTGGAGACAACCGAATGGCTTCTAAGCTGTCTGTaGCCAACCTGGACCACATCAGGAGACAGTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLETTEWLLSCL*PTWTTSGDSIF Trigger: AAAGATACTGTCTCCTGATGTGGTCCAGGTTGGCCACAGACAGCTTAGAAGCCATTCGGTTGTCTCCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CAA 72 bp | AGGTTCGTAGCAGCCGAGATACGCCGCCGCTTGTCCTaGTTAATGAATTTGTTAATGGCATACTCGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RFVAAEIRRRLS*LMNLLMAYSFS Trigger: GGAGAACGAGTATGCCATTAACAAATTCATTAACAAGGACAAGCGGCGGCGTATCTCGGCTGCTACGAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CAA 90 bp | TTCGTAGCAGCCGAGATACGCCGCCGCTTGTCCTTGTTAATGAATTaGTTAATGGCATACTCGTTCTCCAGTTCTTTAAGCTGCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FVAAEIRRRLSLLMN*LMAYSFSSSLSCSL Trigger: CAAACTGCAGCTTAAAGAACTGGAGAACGAGTATGCCATTAACAAATTCATTAACAAGGACAAGCGGCGGCGTATCTCGGCTGCTACGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CAA 90 bp | CTCTCAGATAGGTTCGTAGCAGCCGAGATACGCCGCCGCTTGTCCTaGTTAATGAATTTGTTAATGGCATACTCGTTCTCCAGTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LSDRFVAAEIRRRLS*LMNLLMAYSFSSSL Trigger: TAAAGAACTGGAGAACGAGTATGCCATTAACAAATTCATTAACAAGGACAAGCGGCGGCGTATCTCGGCTGCTACGAACCTATCTGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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| CDS CAA 72 bp | GCCGAGATACGCCGCCGCTTGTCCTTGTTAATGAATTaGTTAATGGCATACTCGTTCTCCAGTTCTTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: AEIRRRLSLLMN*LMAYSFSSSLS Trigger: GCTTAAAGAACTGGAGAACGAGTATGCCATTAACAAATTCATTAACAAGGACAAGCGGCGGCGTATCTCGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392539.4 |
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