Pregenerated sensors for HOXC9 (Homo sapiens)
Ensembl gene IDs: ENSG00000180806Ensembl transcript IDs: ENST00000303450.5, ENST00000504557.1, ENST00000508190.1
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTGTTCTACCATAACAAACAGAAGCACGTTACAGGACGGACGCTaGGGACGAACCCTGGGGATGAGAGGGAACACTATGTACAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: GCSTITNRSTLQDGR*GRTLGMRGNTMYSP Trigger: TGGGCTGTACATAGTGTTCCCTCTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATGGTAGAACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303450.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGGAACACTATGTACAGCCCAAGGCGCCGGCCTGCACGGGCCCGACCTAGCCTTCCCTTGGCTGTGCTaGGGCAGCAGGCTGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: EGTLCTAQGAGLHGPDLAFPWLC*GSRLGR Trigger: CCTACCCAGCCTGCTGCCTCAGCACAGCCAAGGGAA...GGCTAGGTCGGGCCCGTGCAGGCCGGCGCCTTGGGCTGTACATAGTGTTCCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR CCA 90 bp | ACCATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGCGGGGAGGGATGACCTaGACCAAATACGATACAGGG | + |
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Preference number: 2 (lower is better) Translates to: TITNRSTLQDGRWGRTLGRGGMT*TKYDTG Trigger: CCCTGTATCGTATTTGGTCCAGGTCATCCCTCCCCG...CCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR TCA 90 bp | CTCACCCCTCAGCTCCTGGGCTGGGAATCATTATCATGTATGTGTGTGTGTCTTTTCCCTTGGCTGTGCTaGGGCAGCAGGCTGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: LTPQLLGWESLSCMCVCLFPWLC*GSRLGR Trigger: CCTACCCAGCCTGCTGCCTCAGCACAGCCAAGGGAA...AAGACACACACACATACATGATAATGATTCCCAGCCCAGGAGCTGAGGGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR CCA 90 bp | ACCATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGCCGCCTCCTCCTCGCTaGGTAGAACTAACTCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: TITNRSTLQDGRWGRTLGPPPPR*VELTLK Trigger: TTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGG...CCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR TCA 90 bp | AACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGCCAATATCTCAACACTaGACCCTCCCAAATCGCAAG | + |
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Preference number: 2 (lower is better) Translates to: NKQKHVTGRTLGTNPGDEPISQH*TLPNRK Trigger: CTTGCGATTTGGGAGGGTTCAGTGTTGAGATATTGG...CTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR TCA 90 bp | ACCATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGCCAATATCTCAACACTaGACCCTCCCAAATCGCAAG | + |
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Preference number: 2 (lower is better) Translates to: TITNRSTLQDGRWGRTLGPISQH*TLPNRK Trigger: CTTGCGATTTGGGAGGGTTCAGTGTTGAGATATTGG...CCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR CCA 90 bp | CATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATTCACCCCTCAGCTCCTaGGCTGGGAATCATTATCAT | + |
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Preference number: 2 (lower is better) Translates to: HNKQKHVTGRTLGTNPGDSPLSS*AGNHYH Trigger: ATGATAATGATTCCCAGCCCAGGAGCTGAGGGGTGA...ATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR GCA 90 bp | CATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGTCATTTATTTCGGTTaGGCTGGGGAAAGAGAACGC | + |
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Preference number: 2 (lower is better) Translates to: HNKQKHVTGRTLGTNPGDVIYFG*AGERER Trigger: GCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGAC...ATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR GCA 90 bp | CTCACCCCTCAGCTCCTGGGCTGGGAATCATTATCATGTATGTGTGTGTGTCTTGTCATTTATTTCGGTTaGGCTGGGGAAAGAGAACGC | + |
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Preference number: 2 (lower is better) Translates to: LTPQLLGWESLSCMCVCLVIYFG*AGERER Trigger: GCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGAC...AAGACACACACACATACATGATAATGATTCCCAGCCCAGGAGCTGAGGGGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR CAA 90 bp | GAGGGAACACTATGTACAGCCCAAGGCGCCGGCCTGCACGGGCCCGACCTAGCCTGTCATTTATTTCGGTaGCGCTGGGGAAAGAGAACG | + |
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Preference number: 3 (lower is better) Translates to: EGTLCTAQGAGLHGPDLACHLFR*RWGKRT Trigger: CGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACA...GGCTAGGTCGGGCCCGTGCAGGCCGGCGCCTTGGGCTGTACATAGTGTTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR CAA 90 bp | CACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTGTTTTTGTTTTTCCCTaGGCTGTGCTGAGGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: HICMCHLFRLRWGKRTQFVFVFP*AVLRQQ Trigger: CTGCTGCCTCAGCACAGCCAAGGGAAAAACAAAAAC...AAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| 3UTR-3UTR CAA 90 bp | GAACTAACTCTAAAACACCAATATCTCAACACTGAACCCTCCCAAATCGCAAGAGTTTTTGTTTTTCCCTaGGCTGTGCTGAGGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: ELTLKHQYLNTEPSQIARVFVFP*AVLRQQ Trigger: CTGCTGCCTCAGCACAGCCAAGGGAAAAACAAAAAC...TCTTGCGATTTGGGAGGGTTCAGTGTTGAGATATTGGTGTTTTAGAGTTAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR GCA 90 bp | GAGGGAACACTATGTACAGCCCAAGGCGCCGGCCTGCACGGGCCCGACCTAGCCAGTTGGCCACGGGGTTaGTGGGGTCCAGGTCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: EGTLCTAQGAGLHGPDLASWPRG*WGPGRP Trigger: AGGCCGACCTGGACCCCAGCAACCCCGTGGCCAACT...GGCTAGGTCGGGCCCGTGCAGGCCGGCGCCTTGGGCTGTACATAGTGTTCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | GAGGGAACACTATGTACAGCCCAAGGCGCCGGCCTGCACGGGCCCGACCTAGCCCGGTGGCCGGAAACCTaGACGCTAGGAGGTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: EGTLCTAQGAGLHGPDLARWPET*TLGGLH Trigger: ATGAAGACCTCCTAGCGTCCAGGTTTCCGGCCACCG...GGCTAGGTCGGGCCCGTGCAGGCCGGCGCCTTGGGCTGTACATAGTGTTCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | AAATCTGCACGCAGAGCGCCCCAGGCCCGGGGAGGGATGACCTGGACCAAATACCGGGATGAGCCCCGGTaGCCGGAAACCTGGACGCTA | + |
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Preference number: 4 (lower is better) Translates to: KSARRAPQARGGMTWTKYRDEPR*PETWTL Trigger: TAGCGTCCAGGTTTCCGGCCACCGGGGCTCATCCCG...GTATTTGGTCCAGGTCATCCCTCCCCGGGCCTGGGGCGCTCTGCGTGCAGATTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | AACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGGCGCCCACGACGTGCTaGACACTGCCGGCTTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: NKQKHVTGRTLGTNPGDEAPTTC*TLPAWA Trigger: CGCCCAAGCCGGCAGTGTTCAGCACGTCGTGGGCGC...CTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR GCA 90 bp | AAATCTGCACGCAGAGCGCCCCAGGCCCGGGGAGGGATGACCTGGACCAAATACCGACGTGCTGAACACTaGCGGCTTGGGCGCGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: KSARRAPQARGGMTWTKYRRAEH*RLGREA Trigger: AGCTTCGCGCCCAAGCCGGCAGTGTTCAGCACGTCG...GTATTTGGTCCAGGTCATCCCTCCCCGGGCCTGGGGCGCTCTGCGTGCAGATTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR GCA 90 bp | ACCATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGTGTAGTCCGGGTAGCTaGGGCCCTCCCCTGGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TITNRSTLQDGRWGRTLGCSPGS*GPPLGR Trigger: GCGGCCCAGGGGAGGGCCGCAGCTACCCGGACTACA...CCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR GCA 90 bp | AAATCTGCACGCAGAGCGCCCCAGGCCCGGGGAGGGATGACCTGGACCAAATACTCTCCTCTTTGTGCTTaGTGCCGGCGAGCGCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: KSARRAPQARGGMTWTKYSPLCA*CRRARP Trigger: CGGACGCGCTCGCCGGCAGCAAGCACAAAGAGGAGA...GTATTTGGTCCAGGTCATCCCTCCCCGGGCCTGGGGCGCTCTGCGTGCAGATTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | AACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGCCAAACCGCTGGGTCTaGCGGCGGCGGGATGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: NKQKHVTGRTLGTNPGDEPNRWV*RRRDEP Trigger: GGGCTCATCCCGCCGCCGCCAGACCCAGCGGTTTGG...CTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | GAGGGAACACTATGTACAGCCCAAGGCGCCGGCCTGCACGGGCCCGACCTAGCCGACGAACCCTGGGGATaGGAGGGAACACTATGTACA | + |
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Preference number: 4 (lower is better) Translates to: EGTLCTAQGAGLHGPDLADEPWG*EGTLCT Trigger: TGTACATAGTGTTCCCTCTCATCCCCAGGGTTCGTC...GGCTAGGTCGGGCCCGTGCAGGCCGGCGCCTTGGGCTGTACATAGTGTTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | AAATCTGCACGCAGAGCGCCCCAGGCCCGGGGAGGGATGACCTGGACCAAATACTTACAGGACGGACGCTaGGGACGAACCCTGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: KSARRAPQARGGMTWTKYLQDGR*GRTLGM Trigger: CATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAA...GTATTTGGTCCAGGTCATCCCTCCCCGGGCCTGGGGCGCTCTGCGTGCAGATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | ACCATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGTATACCACGGACGACTaGGAGGGCACGGGCGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: TITNRSTLQDGRWGRTLGYTTDD*EGTGAH Trigger: GTGGGCGCCCGTGCCCTCTCAGTCGTCCGTGGTATA...CCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR GCA 90 bp | ACCATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGAGTTGGCCACGGGGTTaGTGGGGTCCAGGTCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: TITNRSTLQDGRWGRTLGSWPRG*WGPGRP Trigger: AGGCCGACCTGGACCCCAGCAACCCCGTGGCCAACT...CCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | GTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTCTCTCCCCGCCCTCGTGGAGCGGGCGTaGATCCAGTTGGCCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: VSFISVALGKENAVSLPALVERA*IQLATG Trigger: CCCCGTGGCCAACTGGATTCACGCCCGCTCCACGAG...GGCGGGGAGAGAAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | ACCATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGTTCCCTTGGCTGTGCTaGGGCAGCAGGCTGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: TITNRSTLQDGRWGRTLGFPWLC*GSRLGR Trigger: CCTACCCAGCCTGCTGCCTCAGCACAGCCAAGGGAA...CCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | CTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATCTCCCGGCACCAAACCGCTaGGTCTGGCGGCGGCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LSPPPPRWVELTLKHQYLPAPNR*VWRRRD Trigger: ATCCCGCCGCCGCCAGACCCAGCGGTTTGGTGCCGG...GAGATATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | AACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGGGGCGTGAATCCAGTTaGCCACGGGGTTGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: NKQKHVTGRTLGTNPGDEGRESS*PRGCWG Trigger: ACCCCAGCAACCCCGTGGCCAACTGGATTCACGCCC...CTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | CTCACCCCTCAGCTCCTGGGCTGGGAATCATTATCATGTATGTGTGTGTGTCTTGGTAGGCGTCCGGCTTaGGGGCGTAGTGACGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LTPQLLGWESLSCMCVCLGRRPA*GRSDGP Trigger: GGGGCCGTCACTACGCCCTCAAGCCGGACGCCTACC...AAGACACACACACATACATGATAATGATTCCCAGCCCAGGAGCTGAGGGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | CTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATCTCCTCGTGGAGCGGGCGTaGATCCAGTTGGCCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: LSPPPPRWVELTLKHQYLLVERA*IQLATG Trigger: CCCCGTGGCCAACTGGATTCACGCCCGCTCCACGAG...GAGATATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR GCA 90 bp | CATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGCCTTCTCCTCTTTGTaGTTGCTGCCGGCGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: HNKQKHVTGRTLGTNPGDAFSSL*LLPASA Trigger: CGCGCTCGCCGGCAGCAAGCACAAAGAGGAGAAGGC...ATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | CTCACCCCTCAGCTCCTGGGCTGGGAATCATTATCATGTATGTGTGTGTGTCTTCCGGCACCAAACCGCTaGGTCTGGCGGCGGCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LTPQLLGWESLSCMCVCLPAPNR*VWRRRD Trigger: ATCCCGCCGCCGCCAGACCCAGCGGTTTGGTGCCGG...AAGACACACACACATACATGATAATGATTCCCAGCCCAGGAGCTGAGGGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | GAGGGAACACTATGTACAGCCCAAGGCGCCGGCCTGCACGGGCCCGACCTAGCCTTATTTCGGTTGCGCTaGGGAAAGAGAACGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: EGTLCTAQGAGLHGPDLALFRLR*GKRTQF Trigger: AAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAA...GGCTAGGTCGGGCCCGTGCAGGCCGGCGCCTTGGGCTGTACATAGTGTTCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | ACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGATTACAGGACGGACGCTaGGGACGAACCCTGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: TNRSTLQDGRWGRTLGMRLQDGR*GRTLGM Trigger: CATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAA...TCTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | ACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGACGGTGGCCGGAAACCTaGACGCTAGGAGGTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: TNRSTLQDGRWGRTLGMRRWPET*TLGGLH Trigger: ATGAAGACCTCCTAGCGTCCAGGTTTCCGGCCACCG...TCTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | AACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGGCTGAGGCAGCAGGCTaGGTAGGGTTTAGGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: NKQKHVTGRTLGTNPGDEAEAAG*VGFRTA Trigger: AGCAGTCCTAAACCCTACCCAGCCTGCTGCCTCAGC...CTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | CTCACCCCTCAGCTCCTGGGCTGGGAATCATTATCATGTATGTGTGTGTGTCTTCGGGATGAGCCCCGGTaGCCGGAAACCTGGACGCTA | + |
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Preference number: 4 (lower is better) Translates to: LTPQLLGWESLSCMCVCLRDEPR*PETWTL Trigger: TAGCGTCCAGGTTTCCGGCCACCGGGGCTCATCCCG...AAGACACACACACATACATGATAATGATTCCCAGCCCAGGAGCTGAGGGGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | ACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGACGGGGAGGGATGACCTaGACCAAATACGATACAGGG | + |
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Preference number: 4 (lower is better) Translates to: TNRSTLQDGRWGRTLGMRRGGMT*TKYDTG Trigger: CCCTGTATCGTATTTGGTCCAGGTCATCCCTCCCCG...TCTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | GTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTCTCTCCCCGCCAGGCCCGGGGAGGGATaGCCTGGACCAAATACGATA | + |
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Preference number: 4 (lower is better) Translates to: VSFISVALGKENAVSLPARPGEG*PGPNTI Trigger: TATCGTATTTGGTCCAGGTCATCCCTCCCCGGGCCT...GGCGGGGAGAGAAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | AACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGGACGAACCCTGGGGATaGGAGGGAACACTATGTACA | + |
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Preference number: 4 (lower is better) Translates to: NKQKHVTGRTLGTNPGDEDEPWG*EGTLCT Trigger: TGTACATAGTGTTCCCTCTCATCCCCAGGGTTCGTC...CTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR GCA 90 bp | GTTTCTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATAGCCTTCTCCTCTTTGTaGTTGCTGCCGGCGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: VSLPASSSLGRTNSKTPIAFSSL*LLPASA Trigger: CGCGCTCGCCGGCAGCAAGCACAAAGAGGAGAAGGC...TATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | CACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTGCGCCCACGACGTGCTaGACACTGCCGGCTTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: HICMCHLFRLRWGKRTQFAPTTC*TLPAWA Trigger: CGCCCAAGCCGGCAGTGTTCAGCACGTCGTGGGCGC...AAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | ATCACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTGGTAGGCGTCCGGCTTaGGGGCGTAGTGACGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ITFVCVIYFGCAGERERSGRRPA*GRSDGP Trigger: GGGGCCGTCACTACGCCCTCAAGCCGGACGCCTACC...ACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR GCA 90 bp | ATCACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTGTAGTCCGGGTAGCTaGGGCCCTCCCCTGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ITFVCVIYFGCAGERERSCSPGS*GPPLGR Trigger: GCGGCCCAGGGGAGGGCCGCAGCTACCCGGACTACA...ACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | CTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATCTCAGCGCTTCTTCCTCGTaGAGCGGGCGTGAATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPPPPRWVELTLKHQYLSASSS*SGRESS Trigger: ACTGGATTCACGCCCGCTCCACGAGGAAGAAGCGCT...GAGATATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR TCA 90 bp | AACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGCATTGTCGTGAGAGATaGGCGAGTCCACGTAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKQKHVTGRTLGTNPGDEHCRER*ASPRNS Trigger: ACTATTACGTGGACTCGCTCATCTCTCACGACAATG...CTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR TCA 90 bp | ACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGACATTGTCGTGAGAGATaGGCGAGTCCACGTAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TNRSTLQDGRWGRTLGMRHCRER*ASPRNS Trigger: ACTATTACGTGGACTCGCTCATCTCTCACGACAATG...TCTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | GTTTCTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATAAGCGCTTCTTCCTCGTaGAGCGGGCGTGAATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLPASSSLGRTNSKTPISASSS*SGRESS Trigger: ACTGGATTCACGCCCGCTCCACGAGGAAGAAGCGCT...TATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | CATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATCCGCCTCCTCCTCGCTaGGTAGAACTAACTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HNKQKHVTGRTLGTNPGDPPPPR*VELTLK Trigger: TTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGG...ATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR TCA 90 bp | ATCACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTATACCACGGACGACTaGGAGGGCACGGGCGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITFVCVIYFGCAGERERSYTTDD*EGTGAH Trigger: GTGGGCGCCCGTGCCCTCTCAGTCGTCCGTGGTATA...ACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR GCA 90 bp | CACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTCCTCTTTGTGCTTGCTaGCGGCGAGCGCGTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HICMCHLFRLRWGKRTQFPLCAC*RRARPP Trigger: AGGCGGACGCGCTCGCCGGCAGCAAGCACAAAGAGG...AAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CCA 90 bp | CACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTTGGCCACGGGGTTGCTaGGGTCCAGGTCGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HICMCHLFRLRWGKRTQFWPRGC*GPGRPS Trigger: AGAAGGCCGACCTGGACCCCAGCAACCCCGTGGCCA...AAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CCA 90 bp | GTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTCTCTCCCCGCCTCACCCCTCAGCTCCTaGGCTGGGAATCATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSFISVALGKENAVSLPASPLSS*AGNHYH Trigger: ATGATAATGATTCCCAGCCCAGGAGCTGAGGGGTGA...GGCGGGGAGAGAAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR TCA 90 bp | CTCACCCCTCAGCTCCTGGGCTGGGAATCATTATCATGTATGTGTGTGTGTCTTAGGTCTTCATTGTCGTaGGAGATGAGCGAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LTPQLLGWESLSCMCVCLRSSLS*EMSEST Trigger: CGTGGACTCGCTCATCTCTCACGACAATGAAGACCT...AAGACACACACACATACATGATAATGATTCCCAGCCCAGGAGCTGAGGGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR TCA 90 bp | GTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTCTCTCCCCGCCCCAATATCTCAACACTaGACCCTCCCAAATCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSFISVALGKENAVSLPAPISQH*TLPNRK Trigger: CTTGCGATTTGGGAGGGTTCAGTGTTGAGATATTGG...GGCGGGGAGAGAAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR GCA 90 bp | CACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTCGACGTGCTGAACACTaGCGGCTTGGGCGCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HICMCHLFRLRWGKRTQFRRAEH*RLGREA Trigger: AGCTTCGCGCCCAAGCCGGCAGTGTTCAGCACGTCG...AAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR GCA 90 bp | ATCACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTCTCCTCTTTGTGCTTaGTGCCGGCGAGCGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ITFVCVIYFGCAGERERSSPLCA*CRRARP Trigger: CGGACGCGCTCGCCGGCAGCAAGCACAAAGAGGAGA...ACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | TGGGTAGAACTAACTCTAAAACACCAATATCTCAACACTGAACCCTCCCAAATCTGGCCACGGGGTTGCTaGGGTCCAGGTCGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WVELTLKHQYLNTEPSQIWPRGC*GPGRPS Trigger: AGAAGGCCGACCTGGACCCCAGCAACCCCGTGGCCA...GATTTGGGAGGGTTCAGTGTTGAGATATTGGTGTTTTAGAGTTAGTTCTACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATCTCCCGCCTCCTCCTCGCTaGGTAGAACTAACTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPPPPRWVELTLKHQYLPPPPR*VELTLK Trigger: TTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGG...GAGATATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | CTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATCTCTCACCCCTCAGCTCCTaGGCTGGGAATCATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPPPPRWVELTLKHQYLSPLSS*AGNHYH Trigger: ATGATAATGATTCCCAGCCCAGGAGCTGAGGGGTGA...GAGATATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATCTCGTCATTTATTTCGGTTaGGCTGGGGAAAGAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPPPPRWVELTLKHQYLVIYFG*AGERER Trigger: GCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGAC...GAGATATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | GAACTAACTCTAAAACACCAATATCTCAACACTGAACCCTCCCAAATCGCAAGAGGGCGTGAATCCAGTTaGCCACGGGGTTGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELTLKHQYLNTEPSQIARGRESS*PRGCWG Trigger: ACCCCAGCAACCCCGTGGCCAACTGGATTCACGCCC...TCTTGCGATTTGGGAGGGTTCAGTGTTGAGATATTGGTGTTTTAGAGTTAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR TCA 90 bp | ATCACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTCCACGTAATAGTTACTaGTGGGCCCCGTCGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: ITFVCVIYFGCAGERERSPRNSY*WAPSPT Trigger: TGTCGGCGACGGGGCCCATCAGTAACTATTACGTGG...ACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR TCA 90 bp | CACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTAGGCCCGGGGAGGGATaGCCTGGACCAAATACGATA | + |
|
Preference number: 4 (lower is better) Translates to: HICMCHLFRLRWGKRTQFRPGEG*PGPNTI Trigger: TATCGTATTTGGTCCAGGTCATCCCTCCCCGGGCCT...AAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGAACTAACTCTAAAACACCAATATCTCAACACTGAACCCTCCCAAATCCCACGTAATAGTTACTaGTGGGCCCCGTCGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: WVELTLKHQYLNTEPSQIPRNSY*WAPSPT Trigger: TGTCGGCGACGGGGCCCATCAGTAACTATTACGTGG...GATTTGGGAGGGTTCAGTGTTGAGATATTGGTGTTTTAGAGTTAGTTCTACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | GAACTAACTCTAAAACACCAATATCTCAACACTGAACCCTCCCAAATCGCAAGAGCTGAGGCAGCAGGCTaGGTAGGGTTTAGGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELTLKHQYLNTEPSQIARAEAAG*VGFRTA Trigger: AGCAGTCCTAAACCCTACCCAGCCTGCTGCCTCAGC...TCTTGCGATTTGGGAGGGTTCAGTGTTGAGATATTGGTGTTTTAGAGTTAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | GTTTCTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATTATTTCGGTTGCGCTaGGGAAAGAGAACGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLPASSSLGRTNSKTPILFRLR*GKRTQF Trigger: AAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAA...TATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | CACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTCCTCAGCTCCTGGGCTaGGAATCATTATCATGTATG | + |
|
Preference number: 4 (lower is better) Translates to: HICMCHLFRLRWGKRTQFPQLLG*ESLSCM Trigger: CATACATGATAATGATTCCCAGCCCAGGAGCTGAGG...AAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CCA 90 bp | TGGGTAGAACTAACTCTAAAACACCAATATCTCAACACTGAACCCTCCCAAATCCCTCAGCTCCTGGGCTaGGAATCATTATCATGTATG | + |
|
Preference number: 4 (lower is better) Translates to: WVELTLKHQYLNTEPSQIPQLLG*ESLSCM Trigger: CATACATGATAATGATTCCCAGCCCAGGAGCTGAGG...GATTTGGGAGGGTTCAGTGTTGAGATATTGGTGTTTTAGAGTTAGTTCTACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS GCA 90 bp | CGGGGTTGCTGGGGTCCAGGTCGGCCTTCTCCTCTTTGTGCTTGCTaGCGGCGAGCGCGTCCGCCTCGGGCGAGGGCAGTGTCTGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGCWGPGRPSPLCAC*RRARPPRARAVSAG Trigger: CCCCGCAGACACTGCCCTCGCCCGAGGCGGACGCGCTCGCCGGCAGCAAGCACAAAGAGGAGAAGGCCGACCTGGACCCCAGCAACCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS GCA 90 bp | CCACGGGGTTGCTGGGGTCCAGGTCGGCCTTCTCCTCTTTGTGCTTaGTGCCGGCGAGCGCGTCCGCCTCGGGCGAGGGCAGTGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PRGCWGPGRPSPLCA*CRRARPPRARAVSA Trigger: CGCAGACACTGCCCTCGCCCGAGGCGGACGCGCTCGCCGGCAGCAAGCACAAAGAGGAGAAGGCCGACCTGGACCCCAGCAACCCCGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS GCA 90 bp | TTGGCCACGGGGTTGCTGGGGTCCAGGTCGGCCTTCTCCTCTTTGTaGTTGCTGCCGGCGAGCGCGTCCGCCTCGGGCGAGGGCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LATGLLGSRSAFSSL*LLPASASASGEGSV Trigger: GACACTGCCCTCGCCCGAGGCGGACGCGCTCGCCGGCAGCAAGCACAAAGAGGAGAAGGCCGACCTGGACCCCAGCAACCCCGTGGCCAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CAA 90 bp | GAGGGAACACTATGTACAGCCCAAGGCGCCGGCCTGCACGGGCCCGACCTAGCCCAGTTGGCCACGGGGTaGCTGGGGTCCAGGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGTLCTAQGAGLHGPDLAQLATG*LGSRSA Trigger: GGCCGACCTGGACCCCAGCAACCCCGTGGCCAACTG...GGCTAGGTCGGGCCCGTGCAGGCCGGCGCCTTGGGCTGTACATAGTGTTCCCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS TCA 90 bp | TCGCTACAGTCCGGCACCAAACCGCTGGGTCTGGCGGCGGCGGGATaGGCCCCGGTGGCCGGAAACCTGGACGCTAGGAGGTCTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SLQSGTKPLGLAAAG*APVAGNLDARRSSL Trigger: CAATGAAGACCTCCTAGCGTCCAGGTTTCCGGCCACCGGGGCTCATCCCGCCGCCGCCAGACCCAGCGGTTTGGTGCCGGACTGTAGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CCA 90 bp | CCGGCACCAAACCGCTGGGTCTGGCGGCGGCGGGATGAGCCCCGGTaGCCGGAAACCTGGACGCTAGGAGGTCTTCATTGTCGTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PAPNRWVWRRRDEPR*PETWTLGGLHCRER Trigger: TCTCTCACGACAATGAAGACCTCCTAGCGTCCAGGTTTCCGGCCACCGGGGCTCATCCCGCCGCCGCCAGACCCAGCGGTTTGGTGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CCA 90 bp | CGAAGCTACAGGACGGAAAATCGCTACAGTCCGGCACCAAACCGCTaGGTCTGGCGGCGGCGGGATGAGCCCCGGTGGCCGGAAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSYRTENRYSPAPNR*VWRRRDEPRWPETW Trigger: CCAGGTTTCCGGCCACCGGGGCTCATCCCGCCGCCGCCAGACCCAGCGGTTTGGTGCCGGACTGTAGCGATTTTCCGTCCTGTAGCTTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CCA 90 bp | TACAGGACGGAAAATCGCTACAGTCCGGCACCAAACCGCTGGGTCTaGCGGCGGCGGGATGAGCCCCGGTGGCCGGAAACCTGGACGCTA | + |
|
Preference number: 5 (lower is better) Translates to: YRTENRYSPAPNRWV*RRRDEPRWPETWTL Trigger: TAGCGTCCAGGTTTCCGGCCACCGGGGCTCATCCCGCCGCCGCCAGACCCAGCGGTTTGGTGCCGGACTGTAGCGATTTTCCGTCCTGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS GCA 90 bp | CACGGACGACTGAGAGGGCACGGGCGCCCACGACGTGCTGAACACTaGCGGCTTGGGCGCGAAGCTACAGGACGGAAAATCGCTACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HGRLRGHGRPRRAEH*RLGREATGRKIATV Trigger: GACTGTAGCGATTTTCCGTCCTGTAGCTTCGCGCCCAAGCCGGCAGTGTTCAGCACGTCGTGGGCGCCCGTGCCCTCTCAGTCGTCCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS TCA 90 bp | GATATACCACGGACGACTGAGAGGGCACGGGCGCCCACGACGTGCTaGACACTGCCGGCTTGGGCGCGAAGCTACAGGACGGAAAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: DIPRTTERARAPTTC*TLPAWARSYRTENR Trigger: GCGATTTTCCGTCCTGTAGCTTCGCGCCCAAGCCGGCAGTGTTCAGCACGTCGTGGGCGCCCGTGCCCTCTCAGTCGTCCGTGGTATATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CAA 90 bp | CATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATCAGTTGGCCACGGGGTaGCTGGGGTCCAGGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HNKQKHVTGRTLGTNPGDQLATG*LGSRSA Trigger: GGCCGACCTGGACCCCAGCAACCCCGTGGCCAACTG...ATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CAA 90 bp | AACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATGAGTTCTCCTCTTTGTGCTaGCTGCCGGCGAGCGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NKQKHVTGRTLGTNPGDEFSSLC*LPASAS Trigger: GGACGCGCTCGCCGGCAGCAAGCACAAAGAGGAGAA...CTCATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CAA 90 bp | GTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTCTCTCCCCGCCCTGAACACTGCCGGCTaGGGCGCGAAGCTACAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSFISVALGKENAVSLPALNTAG*GAKLQD Trigger: GTCCTGTAGCTTCGCGCCCAAGCCGGCAGTGTTCAG...GGCGGGGAGAGAAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CAA 90 bp | GTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTTCTCTCCCCGCCTCGGCCTTCTCCTCTTaGTGCTTGCTGCCGGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSFISVALGKENAVSLPASAFSS*CLLPAS Trigger: GCTCGCCGGCAGCAAGCACAAAGAGGAGAAGGCCGA...GGCGGGGAGAGAAACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CAA 90 bp | AAATCTGCACGCAGAGCGCCCCAGGCCCGGGGAGGGATGACCTGGACCAAATACGTTTTTGTTTTTCCCTaGGCTGTGCTGAGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSARRAPQARGGMTWTKYVFVFP*AVLRQQ Trigger: CTGCTGCCTCAGCACAGCCAAGGGAAAAACAAAAAC...GTATTTGGTCCAGGTCATCCCTCCCCGGGCCTGGGGCGCTCTGCGTGCAGATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATTCTCCTCTTTGTGCTaGCTGCCGGCGAGCGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSLPASSSLGRTNSKTPIFSSLC*LPASAS Trigger: GGACGCGCTCGCCGGCAGCAAGCACAAAGAGGAGAA...TATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATGCCGCTCGGTGAGATaGAGAACCCGGGCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLPASSSLGRTNSKTPICRSVR*RTRATS Trigger: TGAGGTGGCCCGGGTTCTCAATCTCACCGAGCGGCA...TATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
||
| CDS-3UTR CAA 90 bp | CATAACAAACAGAAGCACGTTACAGGACGGACGCTGGGGACGAACCCTGGGGATTGTCATTTATTTCGGTaGCGCTGGGGAAAGAGAACG | + |
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Preference number: 5 (lower is better) Translates to: HNKQKHVTGRTLGTNPGDCHLFR*RWGKRT Trigger: CGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACA...ATCCCCAGGGTTCGTCCCCAGCGTCCGTCCTGTAACGTGCTTCTGTTTGTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CAA 90 bp | ATCACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTGCCGCTCGGTGAGATaGAGAACCCGGGCCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: ITFVCVIYFGCAGERERSCRSVR*RTRATS Trigger: TGAGGTGGCCCGGGTTCTCAATCTCACCGAGCGGCA...ACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CAA 90 bp | CTCTCCCCGCCTCCTCCTCGCTGGGTAGAACTAACTCTAAAACACCAATATCTCGTTTTTGTTTTTCCCTaGGCTGTGCTGAGGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSPPPPRWVELTLKHQYLVFVFP*AVLRQQ Trigger: CTGCTGCCTCAGCACAGCCAAGGGAAAAACAAAAAC...GAGATATTGGTGTTTTAGAGTTAGTTCTACCCAGCGAGGAGGAGGCGGGGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CAA 90 bp | GAACTAACTCTAAAACACCAATATCTCAACACTGAACCCTCCCAAATCGCAAGACTGAACACTGCCGGCTaGGGCGCGAAGCTACAGGAC | + |
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Preference number: 5 (lower is better) Translates to: ELTLKHQYLNTEPSQIARLNTAG*GAKLQD Trigger: GTCCTGTAGCTTCGCGCCCAAGCCGGCAGTGTTCAG...TCTTGCGATTTGGGAGGGTTCAGTGTTGAGATATTGGTGTTTTAGAGTTAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS-3UTR CAA 90 bp | ATCACATTTGTATGTGTCATTTATTTCGGTTGCGCTGGGGAAAGAGAACGCAGTTGTCATTTATTTCGGTaGCGCTGGGGAAAGAGAACG | + |
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Preference number: 5 (lower is better) Translates to: ITFVCVIYFGCAGERERSCHLFR*RWGKRT Trigger: CGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACA...ACTGCGTTCTCTTTCCCCAGCGCAACCGAAATAAATGACACATACAAATGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS TCA 72 bp | TCCGGCACCAAACCGCTGGGTCTGGCGGCGGCGGGATaGGCCCCGGTGGCCGGAAACCTGGACGCTAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SGTKPLGLAAAG*APVAGNLDARR Trigger: CCTCCTAGCGTCCAGGTTTCCGGCCACCGGGGCTCATCCCGCCGCCGCCAGACCCAGCGGTTTGGTGCCGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CAA 90 bp | GCCACGGGGTTGCTGGGGTCCAGGTCGGCCTTCTCCTCTTTGTGCTaGCTGCCGGCGAGCGCGTCCGCCTCGGGCGAGGGCAGTGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ATGLLGSRSAFSSLC*LPASASASGEGSVC Trigger: GCAGACACTGCCCTCGCCCGAGGCGGACGCGCTCGCCGGCAGCAAGCACAAAGAGGAGAAGGCCGACCTGGACCCCAGCAACCCCGTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CAA 72 bp | ACGGGGTTGCTGGGGTCCAGGTCGGCCTTCTCCTCTTaGTGCTTGCTGCCGGCGAGCGCGTCCGCCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: TGLLGSRSAFSS*CLLPASASASG Trigger: GCCCGAGGCGGACGCGCTCGCCGGCAGCAAGCACAAAGAGGAGAAGGCCGACCTGGACCCCAGCAACCCCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS TCA 72 bp | CGGACGACTGAGAGGGCACGGGCGCCCACGACGTGCTaGACACTGCCGGCTTGGGCGCGAAGCTACAGGACG | + |
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Preference number: 6 (lower is better) Translates to: RTTERARAPTTC*TLPAWARSYRT Trigger: CGTCCTGTAGCTTCGCGCCCAAGCCGGCAGTGTTCAGCACGTCGTGGGCGCCCGTGCCCTCTCAGTCGTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CCA 72 bp | AGGACGGAAAATCGCTACAGTCCGGCACCAAACCGCTaGGTCTGGCGGCGGCGGGATGAGCCCCGGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RTENRYSPAPNR*VWRRRDEPRWP Trigger: CGGCCACCGGGGCTCATCCCGCCGCCGCCAGACCCAGCGGTTTGGTGCCGGACTGTAGCGATTTTCCGTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CCA 72 bp | GAAAATCGCTACAGTCCGGCACCAAACCGCTGGGTCTaGCGGCGGCGGGATGAGCCCCGGTGGCCGGAAACC | + |
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Preference number: 6 (lower is better) Translates to: ENRYSPAPNRWV*RRRDEPRWPET Trigger: GGTTTCCGGCCACCGGGGCTCATCCCGCCGCCGCCAGACCCAGCGGTTTGGTGCCGGACTGTAGCGATTTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CCA 72 bp | AACCGCTGGGTCTGGCGGCGGCGGGATGAGCCCCGGTaGCCGGAAACCTGGACGCTAGGAGGTCTTCATTGT | + |
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Preference number: 6 (lower is better) Translates to: NRWVWRRRDEPR*PETWTLGGLHC Trigger: ACAATGAAGACCTCCTAGCGTCCAGGTTTCCGGCCACCGGGGCTCATCCCGCCGCCGCCAGACCCAGCGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS GCA 72 bp | CTGAGAGGGCACGGGCGCCCACGACGTGCTGAACACTaGCGGCTTGGGCGCGAAGCTACAGGACGGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: LRGHGRPRRAEH*RLGREATGRKI Trigger: GATTTTCCGTCCTGTAGCTTCGCGCCCAAGCCGGCAGTGTTCAGCACGTCGTGGGCGCCCGTGCCCTCTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CCA 72 bp | AGCGCTTCTTCCTCGTGGAGCGGGCGTGAATCCAGTTaGCCACGGGGTTGCTGGGGTCCAGGTCGGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SASSSWSGRESS*PRGCWGPGRPS Trigger: AGAAGGCCGACCTGGACCCCAGCAACCCCGTGGCCAACTGGATTCACGCCCGCTCCACGAGGAAGAAGCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CCA 72 bp | AGCGCTTCTTCCTCGTGGAGCGGGCGTGAATCCAGTTaGCCACGGGGTTGCCTTCTCTCCCTCCAGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SASSSWSGRESS*PRGCLLSLQGL Trigger: GAGGCCCTGGAGGGAGAGAAGGCAACCCCGTGGCCAACTGGATTCACGCCCGCTCCACGAGGAAGAAGCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504557.1 |
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| CDS CAA 72 bp | GGCACGGGCGCCCACGACGTGCTGAACACTGCCGGCTaGGGCGCGAAGCTACAGGACGGAAAATCGCTACAG | + |
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Preference number: 6 (lower is better) Translates to: GTGAHDVLNTAG*GAKLQDGKSLQ Trigger: CTGTAGCGATTTTCCGTCCTGTAGCTTCGCGCCCAAGCCGGCAGTGTTCAGCACGTCGTGGGCGCCCGTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303450.5 ENST00000508190.1 |
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| CDS CAA 72 bp | CAGGCAGAGAGACCCAGAAGACTCTGTCCCTCTGGTTaGGTCCAATCCCGCTTCGGAAGCGCCTTCGTTACC | + |
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Preference number: 6 (lower is better) Translates to: QAERPRRLCPSG*VQSRFGSAFVT Trigger: GGTAACGAAGGCGCTTCCGAAGCGGGATTGGACCAAACCAGAGGGACAGAGTCTTCTGGGTCTCTCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504557.1 |
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| CDS CCA 72 bp | AGGCAGAGAGACCCAGAAGACTCTGTCCCTCTGGTTTaGTCCAATCCCGCTTCGGAAGCGCCTTCGTTACCT | + |
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Preference number: 6 (lower is better) Translates to: RQRDPEDSVPLV*SNPASEAPSLP Trigger: AGGTAACGAAGGCGCTTCCGAAGCGGGATTGGACCAAACCAGAGGGACAGAGTCTTCTGGGTCTCTCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504557.1 |
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