Pregenerated sensors for HOXC6 (Homo sapiens)
Ensembl gene IDs: ENSG00000197757Ensembl transcript IDs: ENST00000243108.5, ENST00000394331.3, ENST00000504315.1, ENST00000509328.1
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCTTTCAGGTCCACGTTTaGCTCCCTAATTTTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPFQVHV*LPNFVL Trigger: TAAAACAAAATTAGGGAGTCAAACGTGGACCTGAAA...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTAGAGGGGGTCCAGAGCTaGCTTTCAGGTCCACGTTTG | + |
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Preference number: 2 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVEGVQS*LSGPRL Trigger: CAAACGTGGACCTGAAAGTCAGCTCTGGACCCCCTC...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| 3UTR-3UTR CCA 90 bp | AATATTCGAGAACGGACCCAGAGGTTGGATTTATACAGGAGGGTAACACGAAGGAGCCAAGTCCTCACTTaGAGGGCAATCTGTAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: NIRERTQRLDLYRRVTRRSQVLT*RAICRV Trigger: GACTCTACAGATTGCCCTCCAAGTGAGGACTTGGCT...CCTTCGTGTTACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTCTCGAATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| 3UTR-3UTR CAA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTAGTGATTAGGGGAGAGTaGGTGGGGAGCGAGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVVIRGE*VGSEGE Trigger: TTCTCCCTCGCTCCCCACCAACTCTCCCCTAATCAC...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGTGATTAGGGGAGAGTaGGTGGGGAGCGAGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: KAWTGKRACRQAENELARVIRGE*VGSEGE Trigger: TTCTCCCTCGCTCCCCACCAACTCTCCCCTAATCAC...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCGGGCTAGGCAGGGACTaGGGGGAGGCCCTGGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPGLGRD*GEALGV Trigger: AACCCCCAGGGCCTCCCCGCAGTCCCTGCCTAGCCC...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCCATAGGCGGTGGAATTaGGGGCGACGTTGGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPHRRWN*GRRWGG Trigger: TCCTCCCCAACGTCGCCCTCAATTCCACCGCCTATG...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCAGGACGTCCGAGCGCTaGTGTCACTCTCCCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPRTSER*CHSPSL Trigger: GAGAGAGGGAGAGTGACAGCAGCGCTCGGACGTCCT...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCGCAATCTGTAGAGTCTaGGTTCAGGGTCCGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPAICRV*VQGPSP Trigger: GGGGCTCGGACCCTGAACTCAGACTCTACAGATTGC...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCGGTGAAAGAGAGTTGTaGGGTGAGGGAGGGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPGEREL*GEGGGP Trigger: TGGACCCCCTCCCTCACCGCACAACTCTCTTTCACC...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCTCTATGCCGTACCCCTaGAAGCTCCTACTCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPSMPYP*KLLLHP Trigger: AGGGTGGAGTAGGAGCTTTCAGGGGTACGGCATAGA...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCGTGAATTGCAGGGATTaGAAGGGTGCCTCCCTACCC | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPVNCRD*KGASLP Trigger: GGGTAGGGAGGCACCCTTTCAATCCCTGCAATTCAC...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCCAACCGGGAATGCGATaGATTTGTGTAGCGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPQPGMR*ICVACA Trigger: TGCACACGCTACACAAATGCATCGCATTCCCGGTTG...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTAGGGCTAGGCAGGGACTaGGGGGAGGCCCTGGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVGLGRD*GEALGV Trigger: AACCCCCAGGGCCTCCCCGCAGTCCCTGCCTAGCCC...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGACCCTGGGGGTTGGTGTaGGGCCAAGGCGCGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TGKRACRQAENELARERGPWGLV*GQGAPS Trigger: GGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGG...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCAAAATCCTGAGCGATTaGGGTCTGTGTGTTATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPKILSD*GLCVMS Trigger: GGACATAACACACAGACCTCAATCGCTCAGGATTTT...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCTCAGAACTAAAATCCTaGGCGATTGAGGTCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPSELKS*AIEVCV Trigger: CACACAGACCTCAATCGCTCAGGATTTTAGTTCTGA...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTACCCCACGGGCCAGGCTaGTGCAGGCGAGCGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVPHGPG*CRRAQK Trigger: TTTCTGCGCTCGCCTGCAGCAGCCTGGCCCGTGGGG...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCGGCCAATCCAACTTGTaGGTCGATCGTAAACTTTTA | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPGQSNL*VDRKLL Trigger: TAAAAGTTTACGATCGACTCACAAGTTGGATTGGCC...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | AGGCCCTGGGGGTTGGTGTGGGGCCAAGGCGCGCCCTCCTTGGGCCTCCGGCCCTTGCCTCTCCTGGCTTaGCGAGTTTTAAATATTGTC | + |
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Preference number: 4 (lower is better) Translates to: RPWGLVWGQGAPSLGLRPLPLLA*RVLNIV Trigger: GACAATATTTAAAACTCGGCAAGCCAGGAGAGGCAA...GGGCCGGAGGCCCAAGGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTAGGGGCGTCGAAGGAGTaGGGGAGCCAAGTCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVGASKE*GSQVLT Trigger: AGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCC...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGGGCTGGGCATTTGCTaGGGCAGAGGGGCTAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KAWTGKRACRQAENELARGLGIC*GRGARQ Trigger: CTGCCTAGCCCCTCTGCCCCAGCAAATGCCCAGCCC...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGAAAGAGAGTTGTGCGGTaGGGGAGGGGGTCCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TGKRACRQAENELARERGKRVVR*GRGSRA Trigger: AGCTCTGGACCCCCTCCCTCACCGCACAACTCTCTT...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGATACCCTGGGCAATCCTaGAGTGCAGCAGGAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TGKRACRQAENELARERGYPGQS*SAAGEV Trigger: CACCTCTCCTGCTGCACTGCAGGATTGCCCAGGGTA...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGCATTTGTGTAGCGTGTaGAAATGGGCGCCGCGGTCG | + |
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Preference number: 4 (lower is better) Translates to: KAWTGKRACRQAENELARHLCSV*KWAPRS Trigger: CGACCGCGGCGCCCATTTGCACACGCTACACAAATG...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGTGGATACTGGCTTTCTaGTCCTGGGGCGCAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KAWTGKRACRQAENELARWILAF*SWGAVL Trigger: CAGGACTGCGCCCCAGGACCAGAAAGCCAGTATCCA...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCCCCTGGGGGTTGGTGTaGGGCCAAGGCGCGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IVPVINTECVIRGELVGSPWGLV*GQGAPS Trigger: GGAGGGCGCGCCTTGGCCCCACACCAACCCCCAGGG...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGGAGGCCCTGGGGGTTaGTGTGGGGCCAAGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: IVPVINTECVIRGELVGSGGPGG*CGAKAR Trigger: GCGCGCCTTGGCCCCACACCAACCCCCAGGGCCTCC...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTAACAACATCCCCTCTATaGCGTACCCCTGAAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVTTSPL*RTPESS Trigger: GGAGCTTTCAGGGGTACGGCATAGAGGGGATGTTGT...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | CCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGAGGGACACGGGCCAGGCTGCTaGAGGCGAGCGCAGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PVINTECVIRGELVGSEGHGPGC*RRAQKE Trigger: CTCTTTCTGCGCTCGCCTGCAGCAGCCTGGCCCGTG...TCCCTCGCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | TCGAGAACGGACCCAGAGGTTGGATTTATACAGGAGGGTAACACGAAGGGATTTTTGGGGAGGACGTCCTaGCCCCCGGCGAGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SRTDPEVGFIQEGNTKGFLGRTS*PPARWQ Trigger: CTGCCACCTCGCCGGGGGCCAGGACGTCCTCCCCAA...AAATCCCTTCGTGTTACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTCTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR CCA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTAGGTAAATCTGGATACTaGCTTTCTGGTCCTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVGKSGY*LSGPGA Trigger: CGCCCCAGGACCAGAAAGCCAGTATCCAGATTTACC...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGACAATTTGCCTGGGCTaGGCATTTGCTGGGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: KAWTGKRACRQAENELARTICLG*AFAGAE Trigger: CTCTGCCCCAGCAAATGCCCAGCCCAGGCAAATTGT...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGAGTAGTGGAAGACCACTaGCAGCCACCCAACCAAACC | + |
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Preference number: 4 (lower is better) Translates to: TGKRACRQAENELARERGVVEDH*QPPNQT Trigger: GGTTTGGTTGGGTGGCTGCCAGTGGTCTTCCACTAC...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGCAGGGATTGAAAGGGTaGCTCCCTACCCCTACCTTT | + |
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Preference number: 4 (lower is better) Translates to: KAWTGKRACRQAENELARQGLKG*LPTPTF Trigger: AAAGGTAGGGGTAGGGAGGCACCCTTTCAATCCCTG...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGATGGCAGGGACAGTCCTaGTCACTCTTTCTGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TGKRACRQAENELARERGWQGQS*SLFLLL Trigger: GAGAAGCAGAAAGAGTGACCAGGACTGTCCCTGCCA...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTAAGGTTTCCCTGGCAATaGTTAGGCTCTTACAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVRFPWQ*LGSYRE Trigger: CTCCCTGTAAGAGCCTAACCATTGCCAGGGAAACCT...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | CCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGAGGGAGCCCCCGGCTGGAACTaGACACGACATTCTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PVINTECVIRGELVGSEGAPGWN*TRHSPV Trigger: CACAGGAGAATGTCGTGTTCAGTTCCAGCCGGGGGC...TCCCTCGCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGTGGATCGTGTCAGATTaGCCATACCCACCTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: KAWTGKRACRQAENELARWIVSD*PYPPAF Trigger: AAAGGCAGGTGGGTATGGGCAATCTGACACGATCCA...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | CCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGAGGGATGTAGCGTGTGCAAATaGGCGCCGCGGTCGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: PVINTECVIRGELVGSEGCSVCK*APRSPC Trigger: ACATGGCGACCGCGGCGCCCATTTGCACACGCTACA...TCCCTCGCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCCAGGGAGGACTGTTCTaGGGAGCGCTCGGAACGGAC | + |
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Preference number: 4 (lower is better) Translates to: IVPVINTECVIRGELVGSQGGLF*GALGTD Trigger: GTCCGTTCCGAGCGCTCCGCAGAACAGTCCTCCCTG...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | CCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGAGGGATGGATACTGGCTTTCTaGTCCTGGGGCGCAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PVINTECVIRGELVGSEGWILAF*SWGAVL Trigger: CAGGACTGCGCCCCAGGACCAGAAAGCCAGTATCCA...TCCCTCGCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | CCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGAGGGATTAGGGGAGAGTTGGTaGGGAGCGAGGGAGAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PVINTECVIRGELVGSEGLGESW*GAREKG Trigger: CCCTTTCTCCCTCGCTCCCCACCAACTCTCCCCTAA...TCCCTCGCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGAAGGAATTCATCCCTTTaGCTTTACCTGGTCGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: TGKRACRQAENELARERGRNSSL*LYLVGL Trigger: TAGACCGACCAGGTAAAGGCAAAGGGATGAATTCCT...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR CCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGGCCCTGGGGGTTaGTGTGGGGCCAAGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRGGPGG*CGAKAR Trigger: GCGCGCCTTGGCCCCACACCAACCCCCAGGGCCTCC...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGCCACATGACTTCTTGTaGCCAATCCAACTTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAWTGKRACRQAENELARPHDFL*PIQLVS Trigger: ACTCACAAGTTGGATTGGCCACAAGAAGTCATGTGG...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGAGGGGGTCCAGAGCTaGCTTTCAGGTCCACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IVPVINTECVIRGELVGSEGVQS*LSGPRL Trigger: CAAACGTGGACCTGAAAGTCAGCTCTGGACCCCCTC...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTATCTTTAAATACAATTTaGCTGGGCTGGGCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVSLNTI*LGWAFA Trigger: AGCAAATGCCCAGCCCAGGCAAATTGTATTTAAAGA...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | TCGAGAACGGACCCAGAGGTTGGATTTATACAGGAGGGTAACACGAAGGGATTTTTAGGGGAGAGTTGGTaGGGAGCGAGGGAGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTDPEVGFIQEGNTKGFLGESW*GAREKG Trigger: CCCTTTCTCCCTCGCTCCCCACCAACTCTCCCCTAA...AAATCCCTTCGTGTTACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTCTCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR TCA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGAAAGCTTCAAGCACTaGGGGTCGGTTGCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IVPVINTECVIRGELVGSESFKH*GSVASP Trigger: AGGAGAGGCAACCGACCCTCAGTGCTTGAAGCTTTC...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGACTAAGGTGTTTTGTCTaGAGTTTGAGAGCATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGKRACRQAENELARERGLRCFV*SLRACL Trigger: AAGACATGCTCTCAAACTGCAGACAAAACACCTTAG...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGATCACAGTTTGTAAAATaGCATAATGACCCCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGKRACRQAENELARERGSQFVK*HNDPQD Trigger: ATCCTGGGGGTCATTATGGCATTTTACAAACTGTGA...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCACAATTTGCCTGGGCTaGGCATTTGCTGGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IVPVINTECVIRGELVGSTICLG*AFAGAE Trigger: CTCTGCCCCAGCAAATGCCCAGCCCAGGCAAATTGT...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGTTTCAGGTCCACGTTTaGCTCCCTAATTTTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KAWTGKRACRQAENELARFQVHV*LPNFVL Trigger: TAAAACAAAATTAGGGAGTCAAACGTGGACCTGAAA...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGATTTCAGGTCCACGTTTaGCTCCCTAATTTTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TGKRACRQAENELARERGFQVHV*LPNFVL Trigger: TAAAACAAAATTAGGGAGTCAAACGTGGACCTGAAA...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCTGGCAGGGACAGTCCTaGTCACTCTTTCTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVPVINTECVIRGELVGSWQGQS*SLFLLL Trigger: GAGAAGCAGAAAGAGTGACCAGGACTGTCCCTGCCA...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | CAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGGGGGCGTCGAAGGAGTaGGGGAGCCAAGTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QNTSIVPVINTECVIRGEGASKE*GSQVLT Trigger: AGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCC...CTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGGCTGGGCATTTGCTaGGGCAGAGGGGCTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRGLGIC*GRGARQ Trigger: CTGCCTAGCCCCTCTGCCCCAGCAAATGCCCAGCCC...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGCACTGAGGGTCGGTTaGCTCTCCTGGCTTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRALRVG*LSWLAE Trigger: CTCGGCAAGCCAGGAGAGGCAACCGACCCTCAGTGC...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | CAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTGGCCCCCGGCGAGGTaGCAGGATAAGGAAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QNTSIVPVINTECVIRGEWPPAR*QDKEGL Trigger: TAACCCTTCCTTATCCTGCCACCTCGCCGGGGGCCA...CTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR CCA 90 bp | AATATTCGAGAACGGACCCAGAGGTTGGATTTATACAGGAGGGTAACACGAAGGGGTAAATCTGGATACTaGCTTTCTGGTCCTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NIRERTQRLDLYRRVTRRGKSGY*LSGPGA Trigger: CGCCCCAGGACCAGAAAGCCAGTATCCAGATTTACC...CCTTCGTGTTACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTCTCGAATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR TCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGCATAGGCGGTGGAATTaGGGGCGACGTTGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRHRRWN*GRRWGG Trigger: TCCTCCCCAACGTCGCCCTCAATTCCACCGCCTATG...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGCCCCCGGCTGGAACTaGACACGACATTCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRAPGWN*TRHSPV Trigger: CACAGGAGAATGTCGTGTTCAGTTCCAGCCGGGGGC...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGAAGAGAGTTGTGCGGTaGGGGAGGGGGTCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRKRVVR*GRGSRA Trigger: AGCTCTGGACCCCCTCCCTCACCGCACAACTCTCTT...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | TCGAGAACGGACCCAGAGGTTGGATTTATACAGGAGGGTAACACGAAGGGATTTCGAGAAATGCCTCACTaGATCATAGGCGGTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SRTDPEVGFIQEGNTKGFREMPH*IIGGGI Trigger: AATTCCACCGCCTATGATCCAGTGAGGCATTTCTCG...AAATCCCTTCGTGTTACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTCTCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR CCA 90 bp | TCGAGAACGGACCCAGAGGTTGGATTTATACAGGAGGGTAACACGAAGGGATTTCACGACATTCTCCTGTaGCGAATAAAAGGGAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SRTDPEVGFIQEGNTKGFHDILL*RIKGSR Trigger: TCGACTCCCTTTTATTCGCCACAGGAGAATGTCGTG...AAATCCCTTCGTGTTACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTCTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR CCA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCCACGACATTCTCCTGTaGCGAATAAAAGGGAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IVPVINTECVIRGELVGSHDILL*RIKGSR Trigger: TCGACTCCCTTTTATTCGCCACAGGAGAATGTCGTG...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCCAACCAAACCTGACCTaGAGTGGTCTGAAGAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: IVPVINTECVIRGELVGSQPNLT*SGLKNL Trigger: TAGGTTCTTCAGACCACTCCAGGTCAGGTTTGGTTG...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGCAATCTGTAGAGTCTaGGTTCAGGGTCCGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRAICRV*VQGPSP Trigger: GGGGCTCGGACCCTGAACTCAGACTCTACAGATTGC...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGTGAAAGAGAGTTGTaGGGTGAGGGAGGGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRGEREL*GEGGGP Trigger: TGGACCCCCTCCCTCACCGCACAACTCTCTTTCACC...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | CCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGAGGGATCACAGTTTGTAAAATaGCATAATGACCCCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVINTECVIRGELVGSEGSQFVK*HNDPQD Trigger: ATCCTGGGGGTCATTATGGCATTTTACAAACTGTGA...TCCCTCGCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | AATATTCGAGAACGGACCCAGAGGTTGGATTTATACAGGAGGGTAACACGAAGGGTTTTGTCTGCAGTTTaGGAGCATGTCTTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NIRERTQRLDLYRRVTRRVLSAV*EHVFLL Trigger: CAGGAGAAAGACATGCTCTCAAACTGCAGACAAAAC...CCTTCGTGTTACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTCTCGAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR TCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGCAGTGATGGCTGGTaGATTGCAGGGATTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRGSDGW*IAGIER Trigger: CCTTTCAATCCCTGCAATTCACCAGCCATCACTGCC...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | TCGAGAACGGACCCAGAGGTTGGATTTATACAGGAGGGTAACACGAAGGGATTTCTAAGGTGTTTTGTCTaGAGTTTGAGAGCATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRTDPEVGFIQEGNTKGFLRCFV*SLRACL Trigger: AAGACATGCTCTCAAACTGCAGACAAAACACCTTAG...AAATCCCTTCGTGTTACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTCTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR CCA 90 bp | AATATTCGAGAACGGACCCAGAGGTTGGATTTATACAGGAGGGTAACACGAAGGCCCTTTGCCTTTACCTaGTCGGTCTATGATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIRERTQRLDLYRRVTRRPFAFT*SVYDFF Trigger: AAAGAAATCATAGACCGACCAGGTAAAGGCAAAGGG...CCTTCGTGTTACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTCTCGAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR CCA 90 bp | CAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGAGCCAAGTCCTCACTTaGAGGGCAATCTGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNTSIVPVINTECVIRGESQVLT*RAICRV Trigger: GACTCTACAGATTGCCCTCCAAGTGAGGACTTGGCT...CTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | CAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGAAACCTGACCTGGAGTaGTCTGAAGAACCTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNTSIVPVINTECVIRGEKPDLE*SEEPRG Trigger: TCCCCTAGGTTCTTCAGACCACTCCAGGTCAGGTTT...CTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGCAGGGCAGGTTTCCCTaGCAATGGTTAGGCTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRQGRFP*QWLGSY Trigger: GTAAGAGCCTAACCATTGCCAGGGAAACCTGCCCTG...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | CAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGCGAGAAATGCCTCACTaGATCATAGGCGGTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: QNTSIVPVINTECVIRGEREMPH*IIGGGI Trigger: AATTCCACCGCCTATGATCCAGTGAGGCATTTCTCG...CTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGAGGAGAGGTGAGAATTaGGGTCAACTTCTAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRRRGEN*GQLLGP Trigger: GGGTCCTAGAAGTTGACCCCAATTCTCACCTCTCCT...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR TCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGTCAGAACTAAAATCCTaGGCGATTGAGGTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRSELKS*AIEVCV Trigger: CACACAGACCTCAATCGCTCAGGATTTTAGTTCTGA...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGTTGCCCATACCCACCTaGCTTTCTCAGAAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRLPIPT*LSQKNF Trigger: GAAATTTTTCTGAGAAAGGCAGGTGGGTATGGGCAA...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR GCA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGTCTTTAAATACAATTTaGCTGGGCTGGGCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNQNTSIVPVINTECVIRSLNTI*LGWAFA Trigger: AGCAAATGCCCAGCCCAGGCAAATTGTATTTAAAGA...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | ACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGAGCGAGGAGAATTGAGGGCGACGTaGGGGAGGACGTCCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGKRACRQAENELARERGELRAT*GRTSWP Trigger: GGGCCAGGACGTCCTCCCCAACGTCGCCCTCAATTC...TCCTCGCTCCCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS CCA 90 bp | CCGGTTCTGGGCAACGGCCGCTCCATAGGTCGAGAAATGCCTCACTaGATCATAGGCGGTGGAATTGAGGGCGACGTTGGGGAGGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: PVLGNGRSIGREMPH*IIGGGIEGDVGEDV Trigger: GACGTCCTCCCCAACGTCGCCCTCAATTCCACCGCCTATGATCCAGTGAGGCATTTCTCGACCTATGGAGCGGCCGTTGCCCAGAACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000243108.5 ENST00000394331.3 ENST00000504315.1 |
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| CDS-3UTR CAA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGAGCACTGAGGGTCGGTaGCCTCTCCTGGCTTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KAWTGKRACRQAENELARSTEGR*PLLACR Trigger: TCGGCAAGCCAGGAGAGGCAACCGACCCTCAGTGCT...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS TCA 90 bp | CTCCATAGGTCGAGAAATGCCTCACTGGATCATAGGCGGTGGAATTaGGGGCGACGTTGGGGAGGACGTCCGAGCGCTGCTGTCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHRSRNASLDHRRWN*GRRWGGRPSAAVTL Trigger: GAGAGTGACAGCAGCGCTCGGACGTCCTCCCCAACGTCGCCCTCAATTCCACCGCCTATGATCCAGTGAGGCATTTCTCGACCTATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS TCA 90 bp | CTCCATAGGTCGAGAAATGCCTCACTGGATCATAGGCGGTGGAATTaGGGGCGACGTTGGGGAGGACGTCCTTGTCGCTGCCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHRSRNASLDHRRWN*GRRWGGRPCRCLLL Trigger: GAGGAGGAGGCAGCGACAAGGACGTCCTCCCCAACGTCGCCCTCAATTCCACCGCCTATGATCCAGTGAGGCATTTCTCGACCTATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504315.1 |
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| CDS GCA 90 bp | GGGAGGACGTCCGAGCGCTGCTGTCACTCTCCCTCTCTCCCTCTCTaGCTCTCTCTCTCCCACTCTCTTTCTCGTCTTCCCTCATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRTSERCCHSPSLPL*LSLSHSLSRLPSFC Trigger: ACAGAATGAGGGAAGACGAGAAAGAGAGTGGGAGAGAGAGAGGCAGAGAGGGAGAGAGGGAGAGTGACAGCAGCGCTCGGACGTCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 90 bp | GACCTACCCTGGGCAATCCTGCAGTGCAGCAGGAGAGGTGAGAATTaGGGTCAACTTCTAGGACCCTCAAAACGACCCACATCCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DLPWAILQCSRRGEN*GQLLGPSKRPTSPG Trigger: CCCCGGGGATGTGGGTCGTTTTGAGGGTCCTAGAAGTTGACCCCAATTCTCACCTCTCCTGCTGCACTGCAGGATTGCCCAGGGTAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGGGTGAATTGCAGGGATaGAAAGGGTGCCTCCCTACC | + |
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Preference number: 5 (lower is better) Translates to: KAWTGKRACRQAENELARGELQG*KGCLPT Trigger: GGTAGGGAGGCACCCTTTCAATCCCTGCAATTCACC...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 90 bp | CCTGACCTGGAGTGGTCTGAAGAACCTAGGGGACTAGACCTACCCTaGGCAATCCTGCAGTGCAGCAGGAGAGGTGAGAATTGGGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: PDLEWSEEPRGLDLP*AILQCSRRGENWGQ Trigger: TTGACCCCAATTCTCACCTCTCCTGCTGCACTGCAGGATTGCCCAGGGTAGGTCTAGTCCCCTAGGTTCTTCAGACCACTCCAGGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 90 bp | AATACTGCTAATGAAGGGAGCGCCCAGGGCAGGTTTCCCTGGCAATaGTTAGGCTCTTACAGGGAGGACTGTTCTGCGGAGCGCTCGGAA | + |
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Preference number: 5 (lower is better) Translates to: NTANEGSAQGRFPWQ*LGSYREDCSAERSE Trigger: TTCCGAGCGCTCCGCAGAACAGTCCTCCCTGTAAGAGCCTAACCATTGCCAGGGAAACCTGCCCTGGGCGCTCCCTTCATTAGCAGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTAGGGAATGCGATGCATTaGTGTAGCGTGTGCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVGNAMH*CSVCKW Trigger: CCATTTGCACACGCTACACAAATGCATCGCATTCCC...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 90 bp | ATAGTCATACGGCCCCCGGCTGGAACTGAACACGACATTCTCCTGTaGCGAATAAAAGGGAGTCGAGTAGATCCGGTTCTGGGCAACGGC | + |
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Preference number: 5 (lower is better) Translates to: IVIRPPAGTEHDILL*RIKGSRVDPVLGNG Trigger: GCCGTTGCCCAGAACCGGATCTACTCGACTCCCTTTTATTCGCCACAGGAGAATGTCGTGTTCAGTTCCAGCCGGGGGCCGTATGACTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000243108.5 ENST00000394331.3 ENST00000504315.1 |
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| CDS-3UTR CAA 90 bp | AAGGCCTGGACGGGGAAAAGGGCCTGTAGACAAGCCGAGAACGAGCTAGCAAGGATGGGGGCATTAAGGTaGGATCAGGCGGAATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: KAWTGKRACRQAENELARMGALR*DQAEFK Trigger: TTTGAATTCCGCCTGATCCAACCTTAATGCCCCCAT...CCTTGCTAGCTCGTTCTCGGCTTGTCTACAGGCCCTTTTCCCCGTCCAGGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS TCA 90 bp | AAAGAGCTGAGGGCGGACGCCCAGGCGAAAGAAAGCTTCAAGCACTaGGGGTCGGTTGCCTCTCCTGGCTTGCCGAGTTTTAAATATTGT | + |
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Preference number: 5 (lower is better) Translates to: KELRADAQAKESFKH*GSVASPGLPSFKYC Trigger: ACAATATTTAAAACTCGGCAAGCCAGGAGAGGCAACCGACCCTCAGTGCTTGAAGCTTTCTTTCGCCTGGGCGTCCGCCCTCAGCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 90 bp | CTGCAAACAACCGGGAATGCGATGCATTTGTGTAGCGTGTGCAAATaGGCGCCGCGGTCGCCATGTTTACCCAATTCTCTCATAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LQTTGNAMHLCSVCK*APRSPCLPNSLIEG Trigger: TCCCTCTATGAGAGAATTGGGTAAACATGGCGACCGCGGCGCCCATTTGCACACGCTACACAAATGCATCGCATTCCCGGTTGTTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTAATTTCTGTCTCCAGTTaGTACTCGGAACTAGATGGT | + |
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Preference number: 5 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVISVSS*YSELDG Trigger: ACCATCTAGTTCCGAGTACAAACTGGAGACAGAAAT...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR CAA 90 bp | TGGGGGCGTCGAAGGAGTGGGGGAGCCAAGTCCTCACTTGGAGGGCAATCTGTATTCTTTAAATACAATTaGCCTGGGCTGGGCATTTGC | + |
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Preference number: 5 (lower is better) Translates to: WGRRRSGGAKSSLGGQSVFFKYN*PGLGIC Trigger: GCAAATGCCCAGCCCAGGCAAATTGTATTTAAAGAA...TACAGATTGCCCTCCAAGTGAGGACTTGGCTCCCCCACTCCTTCGACGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | CCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGAGGGATTGGATCGTGTCAGATaGCCCATACCCACCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: PVINTECVIRGELVGSEGLDRVR*PIPTCL Trigger: AAGGCAGGTGGGTATGGGCAATCTGACACGATCCAA...TCCCTCGCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGAATTGAGGGCGACGTaGGGGAGGACGTCCGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: GNQNTSIVPVINTECVIRELRAT*GRTSER Trigger: GCGCTCGGACGTCCTCCCCAACGTCGCCCTCAATTC...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS GCA 90 bp | AATTTTCTGCAAACAACCGGGAATGCGATGCATTTGTGTAGCGTGTaGAAATGGGCGCCGCGGTCGCCATGTTTACCCAATTCTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: NFLQTTGNAMHLCSV*KWAPRSPCLPNSLI Trigger: TATGAGAGAATTGGGTAAACATGGCGACCGCGGCGCCCATTTGCACACGCTACACAAATGCATCGCATTCCCGGTTGTTTGCAGAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCGCGGAATTCAAAGCTTaGCAAAGATTTGTGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: IVPVINTECVIRGELVGSAEFKA*QRFVAL Trigger: CAAGGCCACAAATCTTTGCAAAGCTTTGAATTCCGC...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | ATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGTTGGTGGGGAGCTTCTTTAAATACAATTaGCCTGGGCTGGGCATTTGC | + |
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Preference number: 5 (lower is better) Translates to: IVPVINTECVIRGELVGSFFKYN*PGLGIC Trigger: GCAAATGCCCAGCCCAGGCAAATTGTATTTAAAGAA...GCTCCCCACCAACTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000243108.5 ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | CAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGGAACGGACCCAGAGGTaGGATTTATACAGGAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: QNTSIVPVINTECVIRGEERTQR*DLYRRV Trigger: TACCCTCCTGTATAAATCCAACCTCTGGGTCCGTTC...CTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS-3UTR CAA 90 bp | GGGAATCAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGAAGGCAGTAAGCCTTTaGGATCGTGTCAGATTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GNQNTSIVPVINTECVIRKAVSL*DRVRLP Trigger: GGGCAATCTGACACGATCCAAAAGGCTTACTGCCTT...CCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTGATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS-3UTR CAA 90 bp | CAAAACACATCAATTGTGCCAGTGATAAATACAGAGTGTGTGATTAGGGGAGAGAATCCACATGACTTCTaGTGGCCAATCCAACTTGTG | + |
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Preference number: 5 (lower is better) Translates to: QNTSIVPVINTECVIRGENPHDF*WPIQLV Trigger: CACAAGTTGGATTGGCCACAAGAAGTCATGTGGATT...CTCTCCCCTAATCACACACTCTGTATTTATCACTGGCACAATTGATGTGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS TCA 90 bp | GGACAAACCACAATAAAAAGTTCACGTTCATGGATGGAATCCACATaGCTTCTTGTGGCCAATCCAACTTGTGAGTCGATCGTAAACTTT | + |
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Preference number: 5 (lower is better) Translates to: GQTTIKSSRSWMEST*LLVANPTCESIVNF Trigger: AAAGTTTACGATCGACTCACAAGTTGGATTGGCCACAAGAAGTCATGTGGATTCCATCCATGAACGTGAACTTTTTATTGTGGTTTGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS TCA 90 bp | TTCATGGATGGAATCCACATGACTTCTTGTGGCCAATCCAACTTGTaGGTCGATCGTAAACTTTTATTACTCAGCTGTAAATTTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: FMDGIHMTSCGQSNL*VDRKLLLLSCKFSA Trigger: TGCAGAAAATTTACAGCTGAGTAATAAAAGTTTACGATCGACTCACAAGTTGGATTGGCCACAAGAAGTCATGTGGATTCCATCCATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 72 bp | GCGGTGGAATTGAGGGCGACGTTGGGGAGGACGTCCTaGCCCCCGGCGAGGTGGCAGGATAAGGAAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: AVELRATLGRTS*PPARWQDKEGL Trigger: TAACCCTTCCTTATCCTGCCACCTCGCCGGGGGCCAGGACGTCCTCCCCAACGTCGCCCTCAATTCCACCGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000243108.5 |
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| CDS GCA 72 bp | GAATTGAGGGCGACGTTGGGGAGGACGTCCGAGCGCTaGTGTCACTCTCCCTCTCTCCCTCTCTGCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ELRATLGRTSER*CHSPSLPLCLS Trigger: AGAGAGGCAGAGAGGGAGAGAGGGAGAGTGACAGCAGCGCTCGGACGTCCTCCCCAACGTCGCCCTCAATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS TCA 72 bp | AGGGCGGACGCCCAGGCGAAAGAAAGCTTCAAGCACTaGGGGTCGGTTGCCTCTCCTGGCTTGCCGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RADAQAKESFKH*GSVASPGLPSF Trigger: AAAACTCGGCAAGCCAGGAGAGGCAACCGACCCTCAGTGCTTGAAGCTTTCTTTCGCCTGGGCGTCCGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS TCA 72 bp | TCGAGAAATGCCTCACTGGATCATAGGCGGTGGAATTaGGGGCGACGTTGGGGAGGACGTCCGAGCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SRNASLDHRRWN*GRRWGGRPSAA Trigger: AGCAGCGCTCGGACGTCCTCCCCAACGTCGCCCTCAATTCCACCGCCTATGATCCAGTGAGGCATTTCTCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 72 bp | GGCAACGGCCGCTCCATAGGTCGAGAAATGCCTCACTaGATCATAGGCGGTGGAATTGAGGGCGACGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GNGRSIGREMPH*IIGGGIEGDVG Trigger: CCCAACGTCGCCCTCAATTCCACCGCCTATGATCCAGTGAGGCATTTCTCGACCTATGGAGCGGCCGTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000243108.5 ENST00000394331.3 ENST00000504315.1 |
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| CDS TCA 72 bp | TCGAGAAATGCCTCACTGGATCATAGGCGGTGGAATTaGGGGCGACGTTGGGGAGGACGTCCTTGTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRNASLDHRRWN*GRRWGGRPCRC Trigger: GCAGCGACAAGGACGTCCTCCCCAACGTCGCCCTCAATTCCACCGCCTATGATCCAGTGAGGCATTTCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504315.1 |
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| CDS CCA 72 bp | ACCACTGGCAGCCACCCAACCAAACCTGACCTGGAGTaGTCTGAAGAACCTAGGGGACTAGACCTACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TTGSHPTKPDLE*SEEPRGLDLPW Trigger: CCAGGGTAGGTCTAGTCCCCTAGGTTCTTCAGACCACTCCAGGTCAGGTTTGGTTGGGTGGCTGCCAGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 72 bp | AATGAAGGGAGCGCCCAGGGCAGGTTTCCCTGGCAATaGTTAGGCTCTTACAGGGAGGACTGTTCTGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: NEGSAQGRFPWQ*LGSYREDCSAE Trigger: CTCCGCAGAACAGTCCTCCCTGTAAGAGCCTAACCATTGCCAGGGAAACCTGCCCTGGGCGCTCCCTTCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 72 bp | CGGCCCCCGGCTGGAACTGAACACGACATTCTCCTGTaGCGAATAAAAGGGAGTCGAGTAGATCCGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RPPAGTEHDILL*RIKGSRVDPVL Trigger: CAGAACCGGATCTACTCGACTCCCTTTTATTCGCCACAGGAGAATGTCGTGTTCAGTTCCAGCCGGGGGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000243108.5 ENST00000394331.3 ENST00000504315.1 |
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| CDS CCA 72 bp | AATTCATTCGCTGCATCCAGGGGTAAATCTGGATACTaGCTTTCTGGTCCTGGGGCGCAGTCCTGCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: NSFAASRGKSGY*LSGPGAQSCPA Trigger: AGCAGGGCAGGACTGCGCCCCAGGACCAGAAAGCCAGTATCCAGATTTACCCCTGGATGCAGCGAATGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000243108.5 ENST00000394331.3 ENST00000504315.1 ENST00000509328.1 |
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| CDS CCA 72 bp | GAGTGGTCTGAAGAACCTAGGGGACTAGACCTACCCTaGGCAATCCTGCAGTGCAGCAGGAGAGGTGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: EWSEEPRGLDLP*AILQCSRRGEN Trigger: ATTCTCACCTCTCCTGCTGCACTGCAGGATTGCCCAGGGTAGGTCTAGTCCCCTAGGTTCTTCAGACCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 72 bp | ACCGGGAATGCGATGCATTTGTGTAGCGTGTGCAAATaGGCGCCGCGGTCGCCATGTTTACCCAATTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: TGNAMHLCSVCK*APRSPCLPNSL Trigger: GAGAGAATTGGGTAAACATGGCGACCGCGGCGCCCATTTGCACACGCTACACAAATGCATCGCATTCCCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 72 bp | ACTGCTAATGAAGGGAGCGCCCAGGGCAGGTTTCCCTaGCAATGGTTAGGCTCTTACAGGGAGGACTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: TANEGSAQGRFP*QWLGSYREDCS Trigger: AGAACAGTCCTCCCTGTAAGAGCCTAACCATTGCCAGGGAAACCTGCCCTGGGCGCTCCCTTCATTAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS GCA 72 bp | CAAACAACCGGGAATGCGATGCATTTGTGTAGCGTGTaGAAATGGGCGCCGCGGTCGCCATGTTTACCCAAT | + |
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Preference number: 6 (lower is better) Translates to: QTTGNAMHLCSV*KWAPRSPCLPN Trigger: ATTGGGTAAACATGGCGACCGCGGCGCCCATTTGCACACGCTACACAAATGCATCGCATTCCCGGTTGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CCA 72 bp | TGGGCAATCCTGCAGTGCAGCAGGAGAGGTGAGAATTaGGGTCAACTTCTAGGACCCTCAAAACGACCCACA | + |
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Preference number: 6 (lower is better) Translates to: WAILQCSRRGEN*GQLLGPSKRPT Trigger: TGTGGGTCGTTTTGAGGGTCCTAGAAGTTGACCCCAATTCTCACCTCTCCTGCTGCACTGCAGGATTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CAA 72 bp | GTAAATTTTCTGCAAACAACCGGGAATGCGATGCATTaGTGTAGCGTGTGCAAATGGGCGCCGCGGTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: VNFLQTTGNAMH*CSVCKWAPRSP Trigger: TGGCGACCGCGGCGCCCATTTGCACACGCTACACAAATGCATCGCATTCCCGGTTGTTTGCAGAAAATTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CAA 90 bp | GGGCGGACGCCCAGGCGAAAGAAAGCTTCAAGCACTGAGGGTCGGTaGCCTCTCCTGGCTTGCCGAGTTTTAAATATTGTCCTTAATAAA | + |
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Preference number: 6 (lower is better) Translates to: GRTPRRKKASSTEGR*PLLACRVLNIVLNK Trigger: TTTATTAAGGACAATATTTAAAACTCGGCAAGCCAGGAGAGGCAACCGACCCTCAGTGCTTGAAGCTTTCTTTCGCCTGGGCGTCCGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CAA 90 bp | TACTCAGCTGTAAATTTTCTGCAAACAACCGGGAATGCGATGCATTaGTGTAGCGTGTGCAAATGGGCGCCGCGGTCGCCATGTTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: YSAVNFLQTTGNAMH*CSVCKWAPRSPCLP Trigger: GGGTAAACATGGCGACCGCGGCGCCCATTTGCACACGCTACACAAATGCATCGCATTCCCGGTTGTTTGCAGAAAATTTACAGCTGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS GCA 72 bp | GCTTCAAGCACTGAGGGTCGGTTGCCTCTCCTGGCTTaGCGAGTTTTAAATATTGTCCTTAATAAATGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSTEGRLPLLA*RVLNIVLNKWG Trigger: CCCCCATTTATTAAGGACAATATTTAAAACTCGGCAAGCCAGGAGAGGCAACCGACCCTCAGTGCTTGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS CAA 72 bp | GGGTGCAAGGCAGTAAGCCTTTTGGATCGTGTCAGATaGCCCATACCCACCTGCCTTTCTCAGAAAAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCKAVSLLDRVR*PIPTCLSQKNF Trigger: GAAATTTTTCTGAGAAAGGCAGGTGGGTATGGGCAATCTGACACGATCCAAAAGGCTTACTGCCTTGCACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS TCA 72 bp | ACAATAAAAAGTTCACGTTCATGGATGGAATCCACATaGCTTCTTGTGGCCAATCCAACTTGTGAGTCGATC | + |
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Preference number: 6 (lower is better) Translates to: TIKSSRSWMEST*LLVANPTCESI Trigger: GATCGACTCACAAGTTGGATTGGCCACAAGAAGTCATGTGGATTCCATCCATGAACGTGAACTTTTTATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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| CDS TCA 72 bp | GGAATCCACATGACTTCTTGTGGCCAATCCAACTTGTaGGTCGATCGTAAACTTTTATTACTCAGCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: GIHMTSCGQSNL*VDRKLLLLSCK Trigger: TTTACAGCTGAGTAATAAAAGTTTACGATCGACTCACAAGTTGGATTGGCCACAAGAAGTCATGTGGATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394331.3 |
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