Pregenerated sensors for HOXC5 (Homo sapiens)
Ensembl gene IDs: ENSG00000172789Ensembl transcript IDs: ENST00000312492.3
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCTGTGGCGCGGGCCGGGCCCACCTTAACTCGGGAGGGCCGCGCTaGGGCTGGGAGCCGGAGATACGGCCCAGGCCAAGGTTCGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SCGAGRAHLNSGGPR*GWEPEIRPRPRFVL Trigger: CAGAACGAACCTTGGCCTGGGCCGTATCTCCGGCTCCCAGCCTCAGCGCGGCCCTCCCGAGTTAAGGTGGGCCCGGCCCGCGCCACAGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR GCA 90 bp | GCTGAGGCTGGGAGCCGGAGATACGGCCCAGGCCAAGGTTCGTTCTaGGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAG | + |
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Preference number: 1 (lower is better) Translates to: AEAGSRRYGPGQGSF*ASLYAAALRGSPAE Trigger: CTCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCCGGCTCCCAGCCTCAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCGGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCTGCGGAGCTTGCCCTaGGCCCCGGGTACCGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: GAGDTAQAKVRSAPACTPLRSLP*APGTEL Trigger: CAGCTCGGTACCCGGGGCCCAGGGCAAGCTCCGCAG...CGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCCGGCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR TCA 90 bp | AGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGACCCCGGGTACCGAGCTaGGCCGAGCTGAGGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: RFVLRQPVRRSPPGKSCGPRVPS*AELRGD Trigger: ATCTCCCCTCAGCTCGGCTCAGCTCGGTACCCGGGG...TCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCAAGTCCTGCGGAGCTTaGCCTGGGCCCCGGGTACCG | + |
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Preference number: 2 (lower is better) Translates to: GDTAQAKVRSAPACTPQPKSCGA*PGPRVP Trigger: CGGTACCCGGGGCCCAGGGCAAGCTCCGCAGGACTT...GGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR CCA 90 bp | GAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTGCCCCGCGGGAACCCTaGGTCGGTAGGGATGCGGAA | + |
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Preference number: 2 (lower is better) Translates to: EIRPRPRFVLRQPVRRSPAPREP*VGRDAE Trigger: TTCCGCATCCCTACCGACCCAGGGTTCCCGCGGGGC...AGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGGTCCAGTGCCAGGAAACCCCACTAGTTGAGCTAGCTAGCAGGCTGGGGAAGCGCTTTTGTCTGTaGGGCCCGGGAGCCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: AGVQCQETPLVELASRLGKRFCL*GPGAQC Trigger: GCACTGGGCTCCCGGGCCCCACAGACAAAAGCGCTT...CCCCAGCCTGCTAGCTAGCTCAACTAGTGGGGTTTCCTGGCACTGGACCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR GCA 90 bp | TCAGGAGGGCACAGAAATTCGTGGCAGGGACTATGGGACAGCAAAGGGCCTCTACGGCCTGAGAGGGCATaGAGCAGGCGCAGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SGGHRNSWQGLWDSKGPLRPERA*SRRRLG Trigger: CCCCAGCCTGCGCCTGCTGCATGCCCTCTCAGGCCG...TAGAGGCCCTTTGCTGTCCCATAGTCCCTGCCACGAATTTCTGTGCCCTCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGGGCACAGAAATTCGTGGCAGGGACTATGGGACAGCAAAGGGCCTCTACGAGCTGAGGGGAGATaGGGCAGCGCCGACAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SGGHRNSWQGLWDSKGPLRAEGR*GSADSP Trigger: GGGGCTGTCGGCGCTGCCCCATCTCCCCTCAGCTCG...TAGAGGCCCTTTGCTGTCCCATAGTCCCTGCCACGAATTTCTGTGCCCTCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR GCA 90 bp | AAATCTAGTTTAGTCGCTACAAGGAAGCACCCCGAGTCTAGGGCCAGACTCTCGGGTAGGGATGCGGAATaGCAAGGAAAAGCGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: KSSLVATRKHPESRARLSGRDAE*QGKALL Trigger: CAAAAGCGCTTTTCCTTGGCATTCCGCATCCCTACC...CGAGAGTCTGGCCCTAGACTCGGGGTGCTTCCTTGTAGCGACTAAACTAGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCAGGAAGGACCCAGAGTCAATAAATAGTTGGACAACAGCAATGGGTCAGGAGGTTCCCGGGTTTTaGGGGGAAGAGGTTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SFRKDPESINSWTTAMGQEVPGF*GEEVVE Trigger: CTCCACAACCTCTTCCCCCCAAAACCCGGGAACCTC...CTGACCCATTGCTGTTGTCCAACTATTTATTGACTCTGGGTCCTTCCTGAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR TCA 72 bp | GCGGGCCGGGCCCACCTTAACTCGGGAGGGCCGCGCTaGGGCTGGGAGCCGGAGATACGGCCCAGGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: AGRAHLNSGGPR*GWEPEIRPRPR Trigger: CCTTGGCCTGGGCCGTATCTCCGGCTCCCAGCCTCAGCGCGGCCCTCCCGAGTTAAGGTGGGCCCGGCCCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR CCA 72 bp | CCGCAGCCCTCCGGGGAAGTCCTGCGGAGCTTGCCCTaGGCCCCGGGTACCGAGCTGAGCCGAGCTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: PQPSGEVLRSLP*APGTELSRAEG Trigger: CCCCTCAGCTCGGCTCAGCTCGGTACCCGGGGCCCAGGGCAAGCTCCGCAGGACTTCCCCGGAGGGCTGCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR-3UTR CAA 90 bp | TGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAGCTTGCCCTGCAAGGAAAAGCGCTTTaGTCTGTGGGGCCCGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: CASLYAAALRGSPAELALQGKAL*SVGPGS Trigger: GCTCCCGGGCCCCACAGACAAAAGCGCTTTTCCTTG...CAGGGCAAGCTCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR GCA 72 bp | AGCAAAGGGCCTCTAGGACCACTTGCTGGGGTCCAGTaGCAGGAAACCCCACTAGTTGAGCTAGCTAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SKGPLGPLAGVQ*QETPLVELASR Trigger: CCTGCTAGCTAGCTCAACTAGTGGGGTTTCCTGGCACTGGACCCCAGCAAGTGGTCCTAGAGGCCCTTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR CCA 72 bp | GACAACAGCAATGGGTCAGGAGGGCACAGAAATTCGTaGCAGGGACTATGGGACAGCAAAGGGCCTCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: DNSNGSGGHRNS*QGLWDSKGPLG Trigger: TCCTAGAGGCCCTTTGCTGTCCCATAGTCCCTGCCACGAATTTCTGTGCCCTCCTGACCCATTGCTGTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR GCA 72 bp | GGAAAGCATAGAGCAACTGTGGGGGCCCTAGGCCGATaGTCTCCTTTCATATGCAAATCATTCATAAGTGAA | + |
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Preference number: 3 (lower is better) Translates to: GKHRATVGALGR*SPFICKSFISE Trigger: TTCACTTATGAATGATTTGCATATGAAAGGAGAGCATCGGCCTAGGGCCCCCACAGTTGCTCTATGCTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR CCA 72 bp | TATAGTTTCAGGAAGGACCCAGAGTCAATAAATAGTTaGACAACAGCAATGGGTCAGGAGGGCACAGAAATT | + |
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Preference number: 3 (lower is better) Translates to: YSFRKDPESINS*TTAMGQEGTEI Trigger: AATTTCTGTGCCCTCCTGACCCATTGCTGTTGTCCAACTATTTATTGACTCTGGGTCCTTCCTGAAACTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | GGGTCCGGCGAGGGTCCTGTGGCGCGGGCCGGGCCCACCTTAACTCGGGAGGGCCTCAGTCCGGCGGGCTaGCCTGTCTGCGCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GSGEGPVARAGPTLTREGLSPAG*PVCACS Trigger: GGAGCAGGCGCAGACAGGGCAGCCCGCCGGACTGAG...GCCCTCCCGAGTTAAGGTGGGCCCGGCCCGCGCCACAGGACCCTCGCCGGACCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | CGGGGAAGTCCTGCGGAGCTTGCCCTGGGCCCCGGGTACCGAGCTGAGCCGAGCCTAGCAGGCTGGGGCTaGCGGCCTGAGAGGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: RGSPAELALGPGYRAEPSLAGWG*RPERAC Trigger: GCATGCCCTCTCAGGCCGGCAGCCCCAGCCTGCTAG...GCTCGGCTCAGCTCGGTACCCGGGGCCCAGGGCAAGCTCCGCAGGACTTCCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR CAA 72 bp | TGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAGCTaGCCCTGGGCCCCGGGTACCGAGCTGAGCCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: CTPQPSGEVLRS*PWAPGTELSRA Trigger: AGCTCGGCTCAGCTCGGTACCCGGGGCCCAGGGCAAGCTCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | TCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAGCTTGCCCGAGCCGCTTCGTCTCTaGCCGGAGCGTGTCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SAPACTPQPSGEVLRSLPEPLRL*PERVPE Trigger: CTCCGGGACACGCTCCGGGCAGAGACGAAGCGGCTC...GGGCAAGCTCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | CGGGGAAGTCCTGCGGAGCTTGCCCTGGGCCCCGGGTACCGAGCTGAGCCGAGCCCACGGGTAAATCTGTaGCGGGGCCGGTGGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RGSPAELALGPGYRAEPSPRVNL*RGRWLA Trigger: AGCCAGCCACCGGCCCCGCCACAGATTTACCCGTGG...GCTCGGCTCAGCTCGGTACCCGGGGCCCAGGGCAAGCTCCGCAGGACTTCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGGAGAGGGCGAGGTTAGAGGGTCCGGCGAGGGTCCTGTGGCGCGGGCCGAAGTCCTGCGGAGCTTaGCCTGGGCCCCGGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: TKERARLEGPARVLWRGPKSCGA*PGPRVP Trigger: CGGTACCCGGGGCCCAGGGCAAGCTCCGCAGGACTT...CGGCCCGCGCCACAGGACCCTCGCCGGACCCTCTAACCTCGCCCTCTCCTTTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | TGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAGCTTGCCCTGCCCCGTGGAGAGAGTTaGAAGGCGCAGGCGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: CASLYAAALRGSPAELALPRGES*KAQAVG Trigger: TCCCACCGCCTGCGCCTTCCAACTCTCTCCACGGGG...CAGGGCAAGCTCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCGCCCCGCGGGAACCCTaGGTCGGTAGGGATGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: GDTAQAKVRSAPACTPQPAPREP*VGRDAE Trigger: TTCCGCATCCCTACCGACCCAGGGTTCCCGCGGGGC...GGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR TCA 90 bp | GGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCGGGCGAGCCGCCTTCTaGCTGTACATCCCGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: GDTAQAKVRSAPACTPQPGRAAF*LYIPGF Trigger: GAACCCCGGGATGTACAGTCAGAAGGCGGCTCGCCC...GGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GGAGCCGGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGGGTGAGCCCGGGGGTTaGCAGCCATGTCTACCCCGT | + |
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Preference number: 4 (lower is better) Translates to: GAGDTAQAKVRSAPACTPGEPGG*QPCLPR Trigger: ACGGGGTAGACATGGCTGCCAACCCCCGGGCTCACC...CGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCCGGCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | ACAAAGGAGAGGGCGAGGTTAGAGGGTCCGGCGAGGGTCCTGTGGCGCGGGCCGAAGCGCTTTTGTCTGTaGGGCCCGGGAGCCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: TKERARLEGPARVLWRGPKRFCL*GPGAQC Trigger: GCACTGGGCTCCCGGGCCCCACAGACAAAAGCGCTT...CGGCCCGCGCCACAGGACCCTCGCCGGACCCTCTAACCTCGCCCTCTCCTTTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | AGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAGCAGCAGGCGCAGGCTaGGGAGGTTCCCGGGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: RFVLRQPVRRSPPGKSCGAAGAG*GGSRVL Trigger: CAAAACCCGGGAACCTCCCCAGCCTGCGCCTGCTGC...TCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR TCA 90 bp | CTAACCCGTCCAGCCGGGAACAAAGGAGAGGGCGAGGTTAGAGGGTCCGGCGAGCCCCGGGTACCGAGCTaGGCCGAGCTGAGGGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: LTRPAGNKGEGEVRGSGEPRVPS*AELRGD Trigger: ATCTCCCCTCAGCTCGGCTCAGCTCGGTACCCGGGG...CTCGCCGGACCCTCTAACCTCGCCCTCTCCTTTGTTCCCGGCTGGACGGGTTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GCCAGCCTTTGGCTGTCTAACCCGTCCAGCCGGGAACAAAGGAGAGGGCGAGGTCTGCGGAGCTTGCCCTaGGCCCCGGGTACCGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ASLWLSNPSSREQRRGRGLRSLP*APGTEL Trigger: CAGCTCGGTACCCGGGGCCCAGGGCAAGCTCCGCAG...ACCTCGCCCTCTCCTTTGTTCCCGGCTGGACGGGTTAGACAGCCAAAGGCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR TCA 90 bp | TCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAGCTTGCCCCAGGCGGTGGGAAAGTaGTGCTTAAGTCCAATCCGC | + |
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Preference number: 4 (lower is better) Translates to: SAPACTPQPSGEVLRSLPQAVGK*CLSPIR Trigger: GCGGATTGGACTTAAGCATCACTTTCCCACCGCCTG...GGGCAAGCTCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | GAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTGCGGGCTGCCCTGTCTaGGCCTGCTCCTCTTTGATC | + |
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Preference number: 4 (lower is better) Translates to: EIRPRPRFVLRQPVRRSPAGCPV*ACSSLI Trigger: GATCAAAGAGGAGCAGGCGCAGACAGGGCAGCCCGC...AGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | GGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCCAGTACCTGGATGCCTaGACCTCTGAGGCCGATCCA | + |
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Preference number: 4 (lower is better) Translates to: GDTAQAKVRSAPACTPQPQYLDA*TSEADP Trigger: TGGATCGGCCTCAGAGGTGCAGGCATCCAGGTACTG...GGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | AAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGGCCATGTCTACCCCGTaGAGAGAGTTGGAAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: KVRSAPACTPQPSGEVLRAMSTP*RELEGA Trigger: TGCGCCTTCCAACTCTCTCCACGGGGTAGACATGGC...CCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCACTCTCGCCAGCCTTTaGCTGTCTAACCCGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GDTAQAKVRSAPACTPQPTLASL*LSNPSS Trigger: GCTGGACGGGTTAGACAGCCAAAGGCTGGCGAGAGT...GGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | AGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAGAGGTTCCCGGGTTTTaGGGGGAAGAGGTTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RFVLRQPVRRSPPGKSCGEVPGF*GEEVVE Trigger: CTCCACAACCTCTTCCCCCCAAAACCCGGGAACCTC...TCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | GGAGCCGGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGGTCTCGTGGCTCATGTaGAGTTTGGTCATCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: GAGDTAQAKVRSAPACTPVSWLM*SLVIHG Trigger: CCCGTGGATGACCAAACTGCACATGAGCCACGAGAC...CGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCCGGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | AGGAAAGGCGAAAAGGAAAGGCGCAGGGACAGGAACCGGCTAGGGGCGCGCTCTGGCCAAGGTTCGTTCTaGGCCAGCCTGTACGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: RKGEKERRRDRNRLGARSGQGSF*ASLYAA Trigger: TGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCC...AGAGCGCGCCCCTAGCCGGTTCCTGTCCCTGCGCCTTTCCTTTTCGCCTTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | AAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGCTTGCTGGGGTCCAGTaGCAGGAAACCCCACTAGTT | + |
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Preference number: 4 (lower is better) Translates to: KVRSAPACTPQPSGEVLRLAGVQ*QETPLV Trigger: AACTAGTGGGGTTTCCTGGCACTGGACCCCAGCAAG...CCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | CTAACCCGTCCAGCCGGGAACAAAGGAGAGGGCGAGGTTAGAGGGTCCGGCGAGGCCTCTAGGACCACTTaGTGGGGTCCAGTGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LTRPAGNKGEGEVRGSGEASRTT*WGPVPG Trigger: TCCTGGCACTGGACCCCAGCAAGTGGTCCTAGAGGC...CTCGCCGGACCCTCTAACCTCGCCCTCTCCTTTGTTCCCGGCTGGACGGGTTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | GGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCGGGGCCCTAGGCCGATaGTCTCCTTTCATATGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GDTAQAKVRSAPACTPQPGALGR*SPFICK Trigger: TTTGCATATGAAAGGAGAGCATCGGCCTAGGGCCCC...GGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GCCAGCCTTTGGCTGTCTAACCCGTCCAGCCGGGAACAAAGGAGAGGGCGAGGTGGTAGCGCGTGTAACTaGTTCGGGACCGCTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: ASLWLSNPSSREQRRGRGGSACN*FGTACR Trigger: ACGGCAAGCGGTCCCGAACCAGTTACACGCGCTACC...ACCTCGCCCTCTCCTTTGTTCCCGGCTGGACGGGTTAGACAGCCAAAGGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| 3UTR CAA 72 bp | GTCGGTAGGGATGCGGAATGCCAAGGAAAAGCGCTTTaGTCTGTGGGGCCCGGGAGCCCAGTGCTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: VGRDAECQGKAL*SVGPGSPVLQH Trigger: GTGCTGGAGCACTGGGCTCCCGGGCCCCACAGACAAAAGCGCTTTTCCTTGGCATTCCGCATCCCTACCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | CTAACCCGTCCAGCCGGGAACAAAGGAGAGGGCGAGGTTAGAGGGTCCGGCGAGTTGCCGTCCGTCTCGTaGCTCATGTGCAGTTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LTRPAGNKGEGEVRGSGELPSVS*LMCSLV Trigger: GACCAAACTGCACATGAGCCACGAGACGGACGGCAA...CTCGCCGGACCCTCTAACCTCGCCCTCTCCTTTGTTCCCGGCTGGACGGGTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | AGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAGTTGGACAACAGCAATaGGTCAGGAGGGCACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: RFVLRQPVRRSPPGKSCGVGQQQ*VRRAQK Trigger: TTTCTGTGCCCTCCTGACCCATTGCTGTTGTCCAAC...TCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | AAATCTAGTTTAGTCGCTACAAGGAAGCACCCCGAGTCTAGGGCCAGACTCTCGCGGCCTGAGAGGGCATaGAGCAGGCGCAGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KSSLVATRKHPESRARLSRPERA*SRRRLG Trigger: CCCCAGCCTGCGCCTGCTGCATGCCCTCTCAGGCCG...CGAGAGTCTGGCCCTAGACTCGGGGTGCTTCCTTGTAGCGACTAAACTAGATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCGGCTCATGTGCAGTTTaGTCATCCACGGGTAAATCT | + |
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Preference number: 4 (lower is better) Translates to: GDTAQAKVRSAPACTPQPGSCAV*SSTGKS Trigger: AGATTTACCCGTGGATGACCAAACTGCACATGAGCC...GGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GCCAGCCTTTGGCTGTCTAACCCGTCCAGCCGGGAACAAAGGAGAGGGCGAGGTTCGTGGCAGGGACTATaGGACAGCAAAGGGCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: ASLWLSNPSSREQRRGRGSWQGL*DSKGPL Trigger: TAGAGGCCCTTTGCTGTCCCATAGTCCCTGCCACGA...ACCTCGCCCTCTCCTTTGTTCCCGGCTGGACGGGTTAGACAGCCAAAGGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GCCAGCCTTTGGCTGTCTAACCCGTCCAGCCGGGAACAAAGGAGAGGGCGAGGTGGGCACAGAAATTCGTaGCAGGGACTATGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: ASLWLSNPSSREQRRGRGGHRNS*QGLWDS Trigger: GCTGTCCCATAGTCCCTGCCACGAATTTCTGTGCCC...ACCTCGCCCTCTCCTTTGTTCCCGGCTGGACGGGTTAGACAGCCAAAGGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | TCAGGAGGGCACAGAAATTCGTGGCAGGGACTATGGGACAGCAAAGGGCCTCTATGGTTCGGGACCGCTTaGCGTCCGTCTCGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SGGHRNSWQGLWDSKGPLWFGTA*RPSRGS Trigger: TGAGCCACGAGACGGACGGCAAGCGGTCCCGAACCA...TAGAGGCCCTTTGCTGTCCCATAGTCCCTGCCACGAATTTCTGTGCCCTCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR TCA 90 bp | TCAGGAGGGCACAGAAATTCGTGGCAGGGACTATGGGACAGCAAAGGGCCTCTAGGATGCCTGCACCTCTaGGGCCGATCCATAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SGGHRNSWQGLWDSKGPLGCLHL*GRSIVP Trigger: GGGAACTATGGATCGGCCTCAGAGGTGCAGGCATCC...TAGAGGCCCTTTGCTGTCCCATAGTCCCTGCCACGAATTTCTGTGCCCTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR GCA 90 bp | AGGAAAGGCGAAAAGGAAAGGCGCAGGGACAGGAACCGGCTAGGGGCGCGCTCTGGTAGGGATGCGGAATaGCAAGGAAAAGCGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: RKGEKERRRDRNRLGARSGRDAE*QGKALL Trigger: CAAAAGCGCTTTTCCTTGGCATTCCGCATCCCTACC...AGAGCGCGCCCCTAGCCGGTTCCTGTCCCTGCGCCTTTCCTTTTCGCCTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | TCAGGAGGGCACAGAAATTCGTGGCAGGGACTATGGGACAGCAAAGGGCCTCTACGCCGTAGCAGTACCTaGATGCCTGCACCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGGHRNSWQGLWDSKGPLRRSST*MPAPLR Trigger: CCTCAGAGGTGCAGGCATCCAGGTACTGCTACGGCG...TAGAGGCCCTTTGCTGTCCCATAGTCCCTGCCACGAATTTCTGTGCCCTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GGGTCAGGAGGGCACAGAAATTCGTGGCAGGGACTATGGGACAGCAAAGGGCCTTCTAGGACCACTTGCTaGGGTCCAGTGCCAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSGGHRNSWQGLWDSKGPSRTTC*GPVPGN Trigger: GTTTCCTGGCACTGGACCCCAGCAAGTGGTCCTAGA...AGGCCCTTTGCTGTCCCATAGTCCCTGCCACGAATTTCTGTGCCCTCCTGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | GCCGGAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGGAGTCAATAAATAGTTaGACAACAGCAATGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGDTAQAKVRSAPACTPQESINS*TTAMGQ Trigger: CTGACCCATTGCTGTTGTCCAACTATTTATTGACTC...CTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTCCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR TCA 90 bp | GAGATACGGCCCAGGCCAAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTTTTCTGCACCCTTTTTaGTTAAGGGTGATTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EIRPRPRFVLRQPVRRSPFLHPF*LRVICD Trigger: GTCACAAATCACCCTTAATCAAAAAGGGTGCAGAAA...AGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTTGGCCTGGGCCGTATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR TCA 90 bp | AGGAAAGGCGAAAAGGAAAGGCGCAGGGACAGGAACCGGCTAGGGGCGCGCTCTGCTCTGCTTATAGAATaGATTGGCTACGTAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKGEKERRRDRNRLGARSALLIE*IGYVGA Trigger: AGCTCCTACGTAGCCAATTCATTCTATAAGCAGAGC...AGAGCGCGCCCCTAGCCGGTTCCTGTCCCTGCGCCTTTCCTTTTCGCCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | AAATATAGTTTCAGGAAGGACCCAGAGTCAATAAATAGTTGGACAACAGCAATGCGAGCTGAGGGGAGATaGGGCAGCGCCGACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KYSFRKDPESINSWTTAMRAEGR*GSADSP Trigger: GGGGCTGTCGGCGCTGCCCCATCTCCCCTCAGCTCG...CATTGCTGTTGTCCAACTATTTATTGACTCTGGGTCCTTCCTGAAACTATATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | TCAGGAGGGCACAGAAATTCGTGGCAGGGACTATGGGACAGCAAAGGGCCTCTATATAGGCAGGGATATTaGGGCTCTGCTTATAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SGGHRNSWQGLWDSKGPLYRQGY*GSAYRM Trigger: CATTCTATAAGCAGAGCCCCAATATCCCTGCCTATA...TAGAGGCCCTTTGCTGTCCCATAGTCCCTGCCACGAATTTCTGTGCCCTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CCA 90 bp | AGTTTCAGGAAGGACCCAGAGTCAATAAATAGTTGGACAACAGCAATGGGTCAGGCTTATAGAATGAATTaGCTACGTAGGAGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SFRKDPESINSWTTAMGQAYRMN*LRRSSW Trigger: CCATGAGCTCCTACGTAGCCAATTCATTCTATAAGC...CTGACCCATTGCTGTTGTCCAACTATTTATTGACTCTGGGTCCTTCCTGAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS GCA 90 bp | CCTTCTGACTGTACATCCCGGGGTTCAGAGGAGCCGCTTCGTCTCTaGCCGGAGCGTGTCCCGGAGCGGCCGCGGCGCTGCAGGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSDCTSRGSEEPLRL*PERVPERPRRCRRG Trigger: GCCCCGCCTGCAGCGCCGCGGCCGCTCCGGGACACGCTCCGGGCAGAGACGAAGCGGCTCCTCTGAACCCCGGGATGTACAGTCAGAAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CAA 90 bp | ACAAAGGAGAGGGCGAGGTTAGAGGGTCCGGCGAGGGTCCTGTGGCGCGGGCCGCTGGTTCGGGACCGCTaGCCGTCCGTCTCGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TKERARLEGPARVLWRGPLVRDR*PSVSWL Trigger: GAGCCACGAGACGGACGGCAAGCGGTCCCGAACCAG...CGGCCCGCGCCACAGGACCCTCGCCGGACCCTCTAACCTCGCCCTCTCCTTTGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS TCA 90 bp | CCACTGCTCTTAGCTCGCTCCTCCAGCGCCGGGCGAGCCGCCTTCTaGCTGTACATCCCGGGGTTCAGAGGAGCCGCTTCGTCTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLLARSSSAGRAAF*LYIPGFRGAASSLP Trigger: GGGCAGAGACGAAGCGGCTCCTCTGAACCCCGGGATGTACAGTCAGAAGGCGGCTCGCCCGGCGCTGGAGGAGCGAGCTAAGAGCAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTTTGGCTGTCTAACCCGTCCAGCCGGGAACAAAGGAGAGGGCGAGGTGAAGTCCTGCGGAGCTaGCCCTGGGCCCCGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: ASLWLSNPSSREQRRGRGEVLRS*PWAPGT Trigger: GGTACCCGGGGCCCAGGGCAAGCTCCGCAGGACTTC...ACCTCGCCCTCTCCTTTGTTCCCGGCTGGACGGGTTAGACAGCCAAAGGCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS CCA 90 bp | CGTCTCGTGGCTCATGTGCAGTTTGGTCATCCACGGGTAAATCTGTaGCGGGGCCGGTGGCTGGCTCAGTCCGGCGGGCTGCCCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLVAHVQFGHPRVNL*RGRWLAQSGGLPCL Trigger: CAGACAGGGCAGCCCGCCGGACTGAGCCAGCCACCGGCCCCGCCACAGATTTACCCGTGGATGACCAAACTGCACATGAGCCACGAGACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTTTGGCTGTCTAACCCGTCCAGCCGGGAACAAAGGAGAGGGCGAGGTACCCCGTGGAGAGAGTaGGAAGGCGCAGGCGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLWLSNPSSREQRRGRGTPWRE*EGAGGG Trigger: CCCACCGCCTGCGCCTTCCAACTCTCTCCACGGGGT...ACCTCGCCCTCTCCTTTGTTCCCGGCTGGACGGGTTAGACAGCCAAAGGCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CAA 90 bp | TCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGAGCTTGCCCTCATTGAGACACAAGTaGTTGGCGATCTCTATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAPACTPQPSGEVLRSLPSLRHK*LAISMR Trigger: GCGCATAGAGATCGCCAACAACTTGTGTCTCAATGA...GGGCAAGCTCCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CAA 90 bp | CGCGGGAACCCTGGGTCGGTAGGGATGCGGAATGCCAAGGAAAAGCGCTTTTGTCAAGGAAAAGCGCTTTaGTCTGTGGGGCCCGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RGNPGSVGMRNAKEKRFCQGKAL*SVGPGS Trigger: GCTCCCGGGCCCCACAGACAAAAGCGCTTTTCCTTG...ACAAAAGCGCTTTTCCTTGGCATTCCGCATCCCTACCGACCCAGGGTTCCCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CAA 90 bp | AAGGTTCGTTCTGCGCCAGCCTGTACGCCGCAGCCCTCCGGGGAAGTCCTGCGGTTGATCTGTCTCTCATaGAGACACAAGTTGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KVRSAPACTPQPSGEVLRLICLS*RHKLLA Trigger: CGCCAACAACTTGTGTCTCAATGAGAGACAGATCAA...CCGCAGGACTTCCCCGGAGGGCTGCGGCGTACAGGCTGGCGCAGAACGAACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS TCA 90 bp | TGTCTACCCCGTGGAGAGAGTTGGAAGGCGCAGGCGGTGGGAAAGTaGTGCTTAAGTCCAATCCGCCGTAGCAGTACCTGGATGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: CLPRGESWKAQAVGK*CLSPIRRSSTWMPA Trigger: TGCAGGCATCCAGGTACTGCTACGGCGGATTGGACTTAAGCATCACTTTCCCACCGCCTGCGCCTTCCAACTCTCTCCACGGGGTAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CAA 90 bp | GGGCCTCTAGGACCACTTGCTGGGGTCCAGTGCCAGGAAACCCCACTAGTTGAGTTGAGACACAAGTTGTaGGCGATCTCTATGCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPLGPLAGVQCQETPLVELRHKL*AISMRL Trigger: CAGGCGCATAGAGATCGCCAACAACTTGTGTCTCAA...CTCAACTAGTGGGGTTTCCTGGCACTGGACCCCAGCAAGTGGTCCTAGAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS-3UTR CAA 90 bp | GAGGAAAGGCGAAAAGGAAAGGCGCAGGGACAGGAACCGGCTAGGGGCGCGCTCATAGTTCCCACAAGTTaGCATGTTATAGGCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EERRKGKAQGQEPARGALIVPTS*HVIGRD Trigger: ATCCCTGCCTATAACATGCAAACTTGTGGGAACTAT...GAGCGCGCCCCTAGCCGGTTCCTGTCCCTGCGCCTTTCCTTTTCGCCTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS CCA 90 bp | CCGATCCATAGTTCCCACAAGTTTGCATGTTATAGGCAGGGATATTaGGGCTCTGCTTATAGAATGAATTGGCTACGTAGGAGCTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PIHSSHKFACYRQGY*GSAYRMNWLRRSSW Trigger: CCATGAGCTCCTACGTAGCCAATTCATTCTATAAGCAGAGCCCCAATATCCCTGCCTATAACATGCAAACTTGTGGGAACTATGGATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS GCA 72 bp | TGTACATCCCGGGGTTCAGAGGAGCCGCTTCGTCTCTaGCCGGAGCGTGTCCCGGAGCGGCCGCGGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CTSRGSEEPLRL*PERVPERPRRC Trigger: GCAGCGCCGCGGCCGCTCCGGGACACGCTCCGGGCAGAGACGAAGCGGCTCCTCTGAACCCCGGGATGTACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS GCA 72 bp | TGTGGCGGGGCCGGTGGCTGGCTCAGTCCGGCGGGCTaGCCTGTCTGCGCCTGCTCCTCTTTGATCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CGGAGGWLSPAG*PVCACSSLISP Trigger: TGGGGAGATCAAAGAGGAGCAGGCGCAGACAGGGCAGCCCGCCGGACTGAGCCAGCCACCGGCCCCGCCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS CCA 72 bp | TTTGGTCATCCACGGGTAAATCTGTGGCGGGGCCGGTaGCTGGCTCAGTCCGGCGGGCTGCCCTGTCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: FGHPRVNLWRGR*LAQSGGLPCLR Trigger: GCGCAGACAGGGCAGCCCGCCGGACTGAGCCAGCCACCGGCCCCGCCACAGATTTACCCGTGGATGACCAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS TCA 72 bp | TTAGCTCGCTCCTCCAGCGCCGGGCGAGCCGCCTTCTaGCTGTACATCCCGGGGTTCAGAGGAGCCGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LARSSSAGRAAF*LYIPGFRGAAS Trigger: CGAAGCGGCTCCTCTGAACCCCGGGATGTACAGTCAGAAGGCGGCTCGCCCGGCGCTGGAGGAGCGAGCTAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS CCA 72 bp | GCTCATGTGCAGTTTGGTCATCCACGGGTAAATCTGTaGCGGGGCCGGTGGCTGGCTCAGTCCGGCGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AHVQFGHPRVNL*RGRWLAQSGGL Trigger: CAGCCCGCCGGACTGAGCCAGCCACCGGCCCCGCCACAGATTTACCCGTGGATGACCAAACTGCACATGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS CCA 72 bp | ACCGCTTGCCGTCCGTCTCGTGGCTCATGTGCAGTTTaGTCATCCACGGGTAAATCTGTGGCGGGGCCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TACRPSRGSCAV*SSTGKSVAGPV Trigger: CACCGGCCCCGCCACAGATTTACCCGTGGATGACCAAACTGCACATGAGCCACGAGACGGACGGCAAGCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS GCA 72 bp | GAGTCTGGTAGCGCGTGTAACTGGTTCGGGACCGCTTaGCGTCCGTCTCGTGGCTCATGTGCAGTTTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ESGSACNWFGTA*RPSRGSCAVWS Trigger: TGACCAAACTGCACATGAGCCACGAGACGGACGGCAAGCGGTCCCGAACCAGTTACACGCGCTACCAGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS TCA 72 bp | CGTGGAGAGAGTTGGAAGGCGCAGGCGGTGGGAAAGTaGTGCTTAAGTCCAATCCGCCGTAGCAGTACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGESWKAQAVGK*CLSPIRRSSTW Trigger: CCAGGTACTGCTACGGCGGATTGGACTTAAGCATCACTTTCCCACCGCCTGCGCCTTCCAACTCTCTCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS TCA 72 bp | CAATCCGCCGTAGCAGTACCTGGATGCCTGCACCTCTaGGGCCGATCCATAGTTCCCACAAGTTTGCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: QSAVAVPGCLHL*GRSIVPTSLHV Trigger: AACATGCAAACTTGTGGGAACTATGGATCGGCCTCAGAGGTGCAGGCATCCAGGTACTGCTACGGCGGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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| CDS CCA 72 bp | AGGCAGGGATATTGGGGCTCTGCTTATAGAATGAATTaGCTACGTAGGAGCTCATGGCGGGGAGGGCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RQGYWGSAYRMN*LRRSSWRGGPK Trigger: TTTGGGCCCTCCCCGCCATGAGCTCCTACGTAGCCAATTCATTCTATAAGCAGAGCCCCAATATCCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312492.3 |
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