Pregenerated sensors for HOXC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000198353Ensembl transcript IDs: ENST00000303406.4, ENST00000430889.3, ENST00000507650.1
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCTCCTCACTAACCTCCCCTaGTGCATTTTCAATGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: ALRGSPDAFSFVCCLRPLLTNLP*CIFNAK Trigger: TTTTGCATTGAAAATGCACCAGGGGAGGTTAGTGAG...GAGGGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| 3UTR-3UTR TCA 90 bp | AACACAATAACCACGATAGGGGTGGGGAGAGATTCTACCTATAGACTGCCTCTCTTTGGCTCCTCAAACTaGACAGCTCTGAGAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: NTITTIGVGRDSTYRLPLFGSSN*TALRGS Trigger: AGAGCCTCTCAGAGCTGTTCAGTTTGAGGAGCCAAA...GAGAGGCAGTCTATAGGTAGAATCTCTCCCCACCCCTATCGTGGTTATTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCAGGAGGGCAGGGGGCTaGTTTGTTTATCTGTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: TALRGSPDAFSFVCCLRPRRAGG*FVYLFC Trigger: ACAAAACAGATAAACAAACAAGCCCCCTGCCCTCCT...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCTCATCTGTTTTGTCTGTTaGGAACTGACAAGGGACAAG | + |
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Preference number: 3 (lower is better) Translates to: ALRGSPDAFSFVCCLRPLICFVC*ELTRDK Trigger: CTTGTCCCTTGTCAGTTCCAAACAGACAAAACAGAT...GAGGGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| 3UTR-3UTR CAA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTGGGCAGGGGGCTTGTTaGTTTATCTGTTTTGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: FPLKFTQARPSHLAIYNFGQGAC*FICFVC Trigger: ACAGACAAAACAGATAAACAAACAAGCCCCCTGCCC...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCTGGTCGGGGGCTGGCTaGCTGCAGGCTGGCGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TALRGSPDAFSFVCCLRPWSGAG*LQAGGA Trigger: AGCCCCGCCAGCCTGCAGCCAGCCAGCCCCCGACCA...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | GCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCTCGCGCGGAGGCGGTGGTaGGTACAGCTCCTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: ALRGSPDAFSFVCCLRPLARRRW*VQLLVV Trigger: CACCACCAGGAGCTGTACCCACCACCGCCTCCGCGC...GAGGGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR TCA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCGCCGGCCGGGGGTGCTaGCCTGACTTTGGTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: TALRGSPDAFSFVCCLRPAGRGC*PDFGVG Trigger: CCCAACACCAAAGTCAGGTCAGCACCCCCGGCCGGC...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR TCA 90 bp | GCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCTCCCGGGGGTGCTGACCTaGCTTTGGTGTTGGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: ALRGSPDAFSFVCCLRPLPGVLT*LWCWGV Trigger: GACTCCCCAACACCAAAGTCAGGTCAGCACCCCCGG...GAGGGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR GCA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCAGTACCCGGGGTAGCTaGCGAAAGGGTGCTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: TALRGSPDAFSFVCCLRPSTRGS*RKGAGR Trigger: GCGCCCAGCACCCTTTCGGCAGCTACCCCGGGTACT...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR GCA 90 bp | GCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCTCCCTGGTAATGTCCTCTaGCCGTTGCTGCTCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ALRGSPDAFSFVCCLRPLPGNVL*PLLLRR Trigger: CCGCCGGAGCAGCAACGGGCAGAGGACATTACCAGG...GAGGGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR TCA 90 bp | GCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCTCCTCGCAGAGCGACTGTaGTTTCTCGGGGTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: ALRGSPDAFSFVCCLRPLLAERL*FLGVVV Trigger: CACCACCACCCCGAGAAATCACAGTCGCTCTGCGAG...GAGGGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCGGGCCCCTGGAGACTaGTGCAGCTATACTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: TALRGSPDAFSFVCCLRPRAPGD*CSYTGA Trigger: AGCGCCAGTATAGCTGCACCAGTCTCCAGGGGCCCG...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR GCA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCGCCCCTGGAGACTGGTaGAGCTATACTGGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TALRGSPDAFSFVCCLRPAPGDW*SYTGAQ Trigger: CTGAGCGCCAGTATAGCTGCACCAGTCTCCAGGGGC...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AACACAATAACCACGATAGGGGTGGGGAGAGATTCTACCTATAGACTGCCTCTCGCTGCTCCGGCGGCGTaGCGCTCTGGGAGTGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: NTITTIGVGRDSTYRLPLAAPAA*RSGSGL Trigger: AAGACCACTCCCAGAGCGCCACGCCGCCGGAGCAGC...GAGAGGCAGTCTATAGGTAGAATCTCTCCCCACCCCTATCGTGGTTATTGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AACACAATAACCACGATAGGGGTGGGGAGAGATTCTACCTATAGACTGCCTCTCTGTGATTTCTCGGGGTaGTGGTGGCCCGCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: NTITTIGVGRDSTYRLPLCDFSG*WWPAWA Trigger: GGCCCAGGCGGGCCACCACCACCCCGAGAAATCACA...GAGAGGCAGTCTATAGGTAGAATCTCTCCCCACCCCTATCGTGGTTATTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AACACAATAACCACGATAGGGGTGGGGAGAGATTCTACCTATAGACTGCCTCTCGGCGGCGTGGCGCTCTaGGAGTGGTCTTCAGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: NTITTIGVGRDSTYRLPLGGVAL*EWSSEV Trigger: TACTTCTGAAGACCACTCCCAGAGCGCCACGCCGCC...GAGAGGCAGTCTATAGGTAGAATCTCTCCCCACCCCTATCGTGGTTATTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR GCA 90 bp | AAACTAATTCACATCCACTGGTTTATTATTGATCACGGGGCATTTCACATCGACTCCTCTGCCCGTTGCTaGTCCGGCGGCGTGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: KLIHIHWFIIDHGAFHIDSSARC*SGGVAL Trigger: GAGCGCCACGCCGCCGGAGCAGCAACGGGCAGAGGA...GTCGATGTGAAATGCCCCGTGATCAATAATAAACCAGTGGATGTGAATTAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AAAGAACTTCATAGCTTTGTTCTCCTTAAAATGACTTCCCCCTCACTAACCTCCAGGGCGCGGAGGCGGTaGTGGGTACAGCTCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KELHSFVLLKMTSPSLTSRARRR*WVQLLV Trigger: CACCAGGAGCTGTACCCACCACCGCCTCCGCGCCCT...GGAGGTTAGTGAGGGGGAAGTCATTTTAAGGAGAACAAAGCTATGAAGTTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AAACTAATTCACATCCACTGGTTTATTATTGATCACGGGGCATTTCACATCGACGATTTCTCGGGGTGGTaGTGGCCCGCCTGGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: KLIHIHWFIIDHGAFHIDDFSGW*WPAWAG Trigger: GCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATC...GTCGATGTGAAATGCCCCGTGATCAATAATAAACCAGTGGATGTGAATTAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AACACAATAACCACGATAGGGGTGGGGAGAGATTCTACCTATAGACTGCCTCTCGAGAGGCACAGCGAGTaGGCGATCTCGATCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: NTITTIGVGRDSTYRLPLERHSE*AISILL Trigger: GAGAAGGATCGAGATCGCCCACTCGCTGTGCCTCTC...GAGAGGCAGTCTATAGGTAGAATCTCTCCCCACCCCTATCGTGGTTATTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCGTGTTGGGGAGTCGGTaGTCCTTCTTCCATTTCATG | + |
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Preference number: 4 (lower is better) Translates to: TALRGSPDAFSFVCCLRPVLGSR*SFFHFM Trigger: CATGAAATGGAAGAAGGACCACCGACTCCCCAACAC...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR GCA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTCGTGGCCTCGCGAATTaGCGGGCCCCTGGAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: FPLKFTQARPSHLAIYNFRGLAN*RAPGDW Trigger: CCAGTCTCCAGGGGCCCGGCAATTCGCGAGGCCACG...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR GCA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTATGTCCTCTGCCCGTTaGTGCTCCGGCGGCGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: FPLKFTQARPSHLAIYNFMSSAR*CSGGVA Trigger: CGCCACGCCGCCGGAGCAGCAACGGGCAGAGGACAT...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AACACAATAACCACGATAGGGGTGGGGAGAGATTCTACCTATAGACTGCCTCTCGGAATCCCGATTCCCTaGTCCGGCCGTAATATTCCG | + |
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Preference number: 4 (lower is better) Translates to: NTITTIGVGRDSTYRLPLGIPIP*SGRNIP Trigger: CGGAATATTACGGCCGGACCAGGGAATCGGGATTCC...GAGAGGCAGTCTATAGGTAGAATCTCTCCCCACCCCTATCGTGGTTATTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR TCA 90 bp | AACACAATAACCACGATAGGGGTGGGGAGAGATTCTACCTATAGACTGCCTCTCCAAACTGAACAGCTCTaGGAGGCTCTCCAGATGCAT | + |
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Preference number: 4 (lower is better) Translates to: NTITTIGVGRDSTYRLPLQTEQL*EALQMH Trigger: ATGCATCTGGAGAGCCTCTCAGAGCTGTTCAGTTTG...GAGAGGCAGTCTATAGGTAGAATCTCTCCCCACCCCTATCGTGGTTATTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AAACTAATTCACATCCACTGGTTTATTATTGATCACGGGGCATTTCACATCGACGTGGCGCTCTGGGAGTaGTCTTCAGAAGTACCCGGG | + |
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Preference number: 4 (lower is better) Translates to: KLIHIHWFIIDHGAFHIDVALWE*SSEVPG Trigger: CCCGGGTACTTCTGAAGACCACTCCCAGAGCGCCAC...GTCGATGTGAAATGCCCCGTGATCAATAATAAACCAGTGGATGTGAATTAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTGAATTGCCGGGCCCCTaGAGACTGGTGCAGCTATAC | + |
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Preference number: 4 (lower is better) Translates to: FPLKFTQARPSHLAIYNFELPGP*RLVQLY Trigger: GTATAGCTGCACCAGTCTCCAGGGGCCCGGCAATTC...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR TCA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTTACAGCTCCTGGTGGTaGTGCTGGAATCCCGATTCC | + |
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Preference number: 4 (lower is better) Translates to: FPLKFTQARPSHLAIYNFYSSWW*CWNPDS Trigger: GGAATCGGGATTCCAGCATCACCACCAGGAGCTGTA...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR GCA 90 bp | AAACTAATTCACATCCACTGGTTTATTATTGATCACGGGGCATTTCACATCGACGCATTTAGCTTTGTCTaGTGTCTTCGCCCCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KLIHIHWFIIDHGAFHIDAFSFV*CLRPLS Trigger: GGAGAGGGGGCGAAGACAGCAGACAAAGCTAAATGC...GTCGATGTGAAATGCCCCGTGATCAATAATAAACCAGTGGATGTGAATTAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR TCA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTTTTGGCTCCTCAAACTaGACAGCTCTGAGAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FPLKFTQARPSHLAIYNFFGSSN*TALRGS Trigger: AGAGCCTCTCAGAGCTGTTCAGTTTGAGGAGCCAAA...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR GCA 90 bp | AAACTAATTCACATCCACTGGTTTATTATTGATCACGGGGCATTTCACATCGACGCTTTGTCGTTTTTCTaGTCCATAAAGCCCTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: KLIHIHWFIIDHGAFHIDALSFF*SIKPSY Trigger: GTAGGAGGGCTTTATGGAGCAGAAAAACGACAAAGC...GTCGATGTGAAATGCCCCGTGATCAATAATAAACCAGTGGATGTGAATTAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AAAGAACTTCATAGCTTTGTTCTCCTTAAAATGACTTCCCCCTCACTAACCTCCCTCACTAACCTCCCCTaGTGCATTTTCAATGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: KELHSFVLLKMTSPSLTSLTNLP*CIFNAK Trigger: TTTTGCATTGAAAATGCACCAGGGGAGGTTAGTGAG...GGAGGTTAGTGAGGGGGAAGTCATTTTAAGGAGAACAAAGCTATGAAGTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR TCA 90 bp | AAACTAATTCACATCCACTGGTTTATTATTGATCACGGGGCATTTCACATCGACCCACTGGTTTATTATTaGTCACGGGGCATTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: KLIHIHWFIIDHGAFHIDPLVYY*SRGISH Trigger: ATGTGAAATGCCCCGTGATCAATAATAAACCAGTGG...GTCGATGTGAAATGCCCCGTGATCAATAATAAACCAGTGGATGTGAATTAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | AAAGAACTTCATAGCTTTGTTCTCCTTAAAATGACTTCCCCCTCACTAACCTCCCGAATATTCTTCGCATaGAGGAAATTTCGGATCGAT | + |
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Preference number: 4 (lower is better) Translates to: KELHSFVLLKMTSPSLTSRIFFA*RKFRID Trigger: ATCGATCCGAAATTTCCTCCATGCGAAGAATATTCG...GGAGGTTAGTGAGGGGGAAGTCATTTTAAGGAGAACAAAGCTATGAAGTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR GCA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTATTCTACCTATAGACTaGCTCTCTGAACTGAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: FPLKFTQARPSHLAIYNFILPID*LSELKV Trigger: AACTTTCAGTTCAGAGAGGCAGTCTATAGGTAGAAT...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CCA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTCTAATTCACATCCACTaGTTTATTATTGATCACGGG | + |
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Preference number: 4 (lower is better) Translates to: FPLKFTQARPSHLAIYNFLIHIH*FIIDHG Trigger: CCCGTGATCAATAATAAACCAGTGGATGTGAATTAG...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS CCA 90 bp | AGAGGCGCCGGCTCGCAGAGCGACTGTGATTTCTCGGGGTGGTGGTaGCCCGCCTGGGCCGGCCCGTGGCCTCGCGAATTGCCGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RGAGSQSDCDFSGWW*PAWAGPWPRELPGP Trigger: GGGGCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATCACAGTCGCTCTGCGAGCCGGCGCCTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS GCA 90 bp | CGGGGTGGTGGTGGCCCGCCTGGGCCGGCCCGTGGCCTCGCGAATTaGCGGGCCCCTGGAGACTGGTGCAGCTATACTGGCGCTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: RGGGGPPGPARGLAN*RAPGDWCSYTGAQG Trigger: ACCCTGAGCGCCAGTATAGCTGCACCAGTCTCCAGGGGCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 90 bp | GAGAGAGGCGCCGGCTCGCAGAGCGACTGTGATTTCTCGGGGTGGTaGTGGCCCGCCTGGGCCGGCCCGTGGCCTCGCGAATTGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: ERGAGSQSDCDFSGW*WPAWAGPWPRELPG Trigger: GCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATCACAGTCGCTCTGCGAGCCGGCGCCTCTCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 90 bp | GGCTCGCAGAGCGACTGTGATTTCTCGGGGTGGTGGTGGCCCGCCTaGGCCGGCCCGTGGCCTCGCGAATTGCCGGGCCCCTGGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: GSQSDCDFSGWWWPA*AGPWPRELPGPWRL Trigger: CAGTCTCCAGGGGCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATCACAGTCGCTCTGCGAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 90 bp | CCTGAGAGAGGCGCCGGCTCGCAGAGCGACTGTGATTTCTCGGGGTaGTGGTGGCCCGCCTGGGCCGGCCCGTGGCCTCGCGAATTGCCG | + |
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Preference number: 5 (lower is better) Translates to: PERGAGSQSDCDFSG*WWPAWAGPWPRELP Trigger: CGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATCACAGTCGCTCTGCGAGCCGGCGCCTCTCTCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 90 bp | GACTGTGATTTCTCGGGGTGGTGGTGGCCCGCCTGGGCCGGCCCGTaGCCTCGCGAATTGCCGGGCCCCTGGAGACTGGTGCAGCTATAC | + |
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Preference number: 5 (lower is better) Translates to: DCDFSGWWWPAWAGP*PRELPGPWRLVQLY Trigger: GTATAGCTGCACCAGTCTCCAGGGGCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATCACAGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 90 bp | ATGTCCTCTGCCCGTTGCTGCTCCGGCGGCGTGGCGCTCTGGGAGTaGTCTTCAGAAGTACCCGGGGTAGCTGCCGAAAGGGTGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: MSSARCCSGGVALWE*SSEVPGVAAERVLG Trigger: GCCCAGCACCCTTTCGGCAGCTACCCCGGGTACTTCTGAAGACCACTCCCAGAGCGCCACGCCGCCGGAGCAGCAACGGGCAGAGGACAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 90 bp | CTGGTAATGTCCTCTGCCCGTTGCTGCTCCGGCGGCGTGGCGCTCTaGGAGTGGTCTTCAGAAGTACCCGGGGTAGCTGCCGAAAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LVMSSARCCSGGVAL*EWSSEVPGVAAERV Trigger: CACCCTTTCGGCAGCTACCCCGGGTACTTCTGAAGACCACTCCCAGAGCGCCACGCCGCCGGAGCAGCAACGGGCAGAGGACATTACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS GCA 90 bp | CTGACGTCATTTCTGGAGGTCTGGGGGTTGAGCCCCCGCGAGCGCTaGTGTCACTCTCCCTCTCTCCCTCTCTGCCTCTCTCTCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LTSFLEVWGLSPRER*CHSPSLPLCLSLSH Trigger: GTGGGAGAGAGAGAGGCAGAGAGGGAGAGAGGGAGAGTGACAGCAGCGCTCGCGGGGGCTCAACCCCCAGACCTCCAGAAATGACGTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000303406.4 |
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| CDS CCA 90 bp | GCAGCTATACTGGCGCTCAGGGTAGCTAGGGCGCGGAGGCGGTGGTaGGTACAGCTCCTGGTGGTGATGCTGGAATCCCGATTCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAILALRVARARRRW*VQLLVVMLESRFPG Trigger: ACCAGGGAATCGGGATTCCAGCATCACCACCAGGAGCTGTACCCACCACCGCCTCCGCGCCCTAGCTACCCTGAGCGCCAGTATAGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 90 bp | GGTGCAGCTATACTGGCGCTCAGGGTAGCTAGGGCGCGGAGGCGGTaGTGGGTACAGCTCCTGGTGGTGATGCTGGAATCCCGATTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GAAILALRVARARRR*WVQLLVVMLESRFP Trigger: AGGGAATCGGGATTCCAGCATCACCACCAGGAGCTGTACCCACCACCGCCTCCGCGCCCTAGCTACCCTGAGCGCCAGTATAGCTGCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCCGTGGCCTCGCGAATaGCCGGGCCCCTGGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: TALRGSPDAFSFVCCLRPPWPRE*PGPWRL Trigger: CAGTCTCCAGGGGCCCGGCAATTCGCGAGGCCACGG...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS GCA 90 bp | TTGAGCCCCCGCGAGCGCTGCTGTCACTCTCCCTCTCTCCCTCTCTaGCTCTCTCTCTCCCACTCTCTTTCTCGTCTTCCCTCATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSPRERCCHSPSLPL*LSLSHSLSRLPSFC Trigger: ACAGAATGAGGGAAGACGAGAAAGAGAGTGGGAGAGAGAGAGGCAGAGAGGGAGAGAGGGAGAGTGACAGCAGCGCTCGCGGGGGCTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303406.4 |
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| CDS GCA 90 bp | GTAACCTCTCTCACCATCGTCCCCAGCGCCGTAATCCCCTCTAACTaGCAGGCCCTCTGTCCTAGCATTAAACCTCACCAGCAGCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VTSLTIVPSAVIPSN*QALCPSIKPHQQLR Trigger: ACGCAGCTGCTGGTGAGGTTTAATGCTAGGACAGAGGGCCTGGCAGTTAGAGGGGATTACGGCGCTGGGGACGATGGTGAGAGAGGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507650.1 |
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| CDS GCA 90 bp | AGAGGGCACCAGAGTCTGCTCTTCAGCGTTCGCCTGGGATTCATTTaGGAAGATGTAACCTCTCTCACCATCGTCCCCAGCGCCGTAATC | + |
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Preference number: 5 (lower is better) Translates to: RGHQSLLFSVRLGFI*EDVTSLTIVPSAVI Trigger: GATTACGGCGCTGGGGACGATGGTGAGAGAGGTTACATCTTCGCAAATGAATCCCAGGCGAACGCTGAAGAGCAGACTCTGGTGCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507650.1 |
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| CDS CCA 90 bp | GTGGTGGGTACAGCTCCTGGTGGTGATGCTGGAATCCCGATTCCCTaGTCCGGCCGTAATATTCCGGACTGTGTTCAGGGATGTAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: VVGTAPGGDAGIPIP*SGRNIPDCVQGCSY Trigger: ATAGCTACATCCCTGAACACAGTCCGGAATATTACGGCCGGACCAGGGAATCGGGATTCCAGCATCACCACCAGGAGCTGTACCCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCGACCTGACTTTGGTGTaGGGGAGTCGGTGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TALRGSPDAFSFVCCLRPDLTLV*GSRWSF Trigger: GAAGGACCACCGACTCCCCAACACCAAAGTCAGGTC...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | GCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCTCCAGATGCATTTAGCTTaGTCTGCTGTCTTCGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALRGSPDAFSFVCCLRPLQMHLA*SAVFAP Trigger: GGGGGCGAAGACAGCAGACAAAGCTAAATGCATCTG...GAGGGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | GCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCCTCGGGCAGGGGGCTTGTTaGTTTATCTGTTTTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALRGSPDAFSFVCCLRPLGQGAC*FICFVC Trigger: ACAGACAAAACAGATAAACAAACAAGCCCCCTGCCC...GAGGGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTAATGTCCTCTGCCCGTaGCTGCTCCGGCGGCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPLKFTQARPSHLAIYNFNVLCP*LLRRRG Trigger: GCCACGCCGCCGGAGCAGCAACGGGCAGAGGACATT...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCATCTGTTTTGTCTGTTaGGAACTGACAAGGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TALRGSPDAFSFVCCLRPICFVC*ELTRDK Trigger: CTTGTCCCTTGTCAGTTCCAAACAGACAAAACAGAT...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | ACAGCTCTGAGAGGCTCTCCAGATGCATTTAGCTTTGTCTGCTGTCTTCGCCCCTCCACTGGTTTATTATaGATCACGGGGCATTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TALRGSPDAFSFVCCLRPSTGLL*ITGHFT Trigger: TGTGAAATGCCCCGTGATCAATAATAAACCAGTGGA...GGGGCGAAGACAGCAGACAAAGCTAAATGCATCTGGAGAGCCTCTCAGAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | TTTCCCCTGAAATTCACCCAAGCCAGACCATCACACCTTGCAATATATAATTTTGGTGCTGACCTGACTTaGGTGTTGGGGAGTCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPLKFTQARPSHLAIYNFGADLT*VLGSRW Trigger: CCACCGACTCCCCAACACCAAAGTCAGGTCAGCACC...AAAATTATATATTGCAAGGTGTGATGGTCTGGCTTGGGTGAATTTCAGGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | AACACAATAACCACGATAGGGGTGGGGAGAGATTCTACCTATAGACTGCCTCTCAGGAGGGCAGGGGGCTaGTTTGTTTATCTGTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NTITTIGVGRDSTYRLPLRRAGG*FVYLFC Trigger: ACAAAACAGATAAACAAACAAGCCCCCTGCCCTCCT...GAGAGGCAGTCTATAGGTAGAATCTCTCCCCACCCCTATCGTGGTTATTGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS-3UTR CAA 90 bp | AAAGAACTTCATAGCTTTGTTCTCCTTAAAATGACTTCCCCCTCACTAACCTCCAGGGATGTAGCTATTTaGCGAATATTCTTCGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: KELHSFVLLKMTSPSLTSRDVAI*RIFFAW Trigger: CCATGCGAAGAATATTCGCAAAATAGCTACATCCCT...GGAGGTTAGTGAGGGGGAAGTCATTTTAAGGAGAACAAAGCTATGAAGTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430889.3 |
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| CDS CCA 72 bp | GGCGCCGGCTCGCAGAGCGACTGTGATTTCTCGGGGTaGTGGTGGCCCGCCTGGGCCGGCCCGTGGCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GAGSQSDCDFSG*WWPAWAGPWPR Trigger: GCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATCACAGTCGCTCTGCGAGCCGGCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 72 bp | TTCTCGGGGTGGTGGTGGCCCGCCTGGGCCGGCCCGTaGCCTCGCGAATTGCCGGGCCCCTGGAGACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSGWWWPAWAGP*PRELPGPWRLV Trigger: CACCAGTCTCCAGGGGCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS GCA 72 bp | GGTGGCCCGCCTGGGCCGGCCCGTGGCCTCGCGAATTaGCGGGCCCCTGGAGACTGGTGCAGCTATACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGPPGPARGLAN*RAPGDWCSYTG Trigger: GCCAGTATAGCTGCACCAGTCTCCAGGGGCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 72 bp | AGCGACTGTGATTTCTCGGGGTGGTGGTGGCCCGCCTaGGCCGGCCCGTGGCCTCGCGAATTGCCGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SDCDFSGWWWPA*AGPWPRELPGP Trigger: GGGGCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATCACAGTCGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 72 bp | GCCGGCTCGCAGAGCGACTGTGATTTCTCGGGGTGGTaGTGGCCCGCCTGGGCCGGCCCGTGGCCTCGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: AGSQSDCDFSGW*WPAWAGPWPRE Trigger: TTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATCACAGTCGCTCTGCGAGCCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CAA 90 bp | TCGGGGTGGTGGTGGCCCGCCTGGGCCGGCCCGTGGCCTCGCGAATaGCCGGGCCCCTGGAGACTGGTGCAGCTATACTGGCGCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGWWWPAWAGPWPRE*PGPWRLVQLYWRSG Trigger: CCCTGAGCGCCAGTATAGCTGCACCAGTCTCCAGGGGCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CAA 72 bp | TGGTGGCCCGCCTGGGCCGGCCCGTGGCCTCGCGAATaGCCGGGCCCCTGGAGACTGGTGCAGCTATACTGG | + |
|
Preference number: 6 (lower is better) Translates to: WWPAWAGPWPRE*PGPWRLVQLYW Trigger: CCAGTATAGCTGCACCAGTCTCCAGGGGCCCGGCAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS GCA 72 bp | GCTCTGGGAGTGGTCTTCAGAAGTACCCGGGGTAGCTaGCGAAAGGGTGCTGGGCGCAGCGCCGGCCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALGVVFRSTRGS*RKGAGRSAGRG Trigger: CCCCCGGCCGGCGCTGCGCCCAGCACCCTTTCGGCAGCTACCCCGGGTACTTCTGAAGACCACTCCCAGAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 72 bp | GGCTCGCAGAGCGACTGTGATTTCTCGGGGTGGTGGTaGCCCGCCTGGGCCGGCCCGTGGCCTCGCGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: GSQSDCDFSGWW*PAWAGPWPREL Trigger: CAATTCGCGAGGCCACGGGCCGGCCCAGGCGGGCCACCACCACCCCGAGAAATCACAGTCGCTCTGCGAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS TCA 72 bp | CGAAAGGGTGCTGGGCGCAGCGCCGGCCGGGGGTGCTaGCCTGACTTTGGTGTTGGGGAGTCGGTGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RKGAGRSAGRGC*PDFGVGESVVL Trigger: AAGGACCACCGACTCCCCAACACCAAAGTCAGGTCAGCACCCCCGGCCGGCGCTGCGCCCAGCACCCTTTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS GCA 72 bp | CTCTTCCCCATACACACTCACCCAACCCTCTGGCCATaGGGCCGGCGAGGCAGGGTCCCAGCTGGACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LFPIHTHPTLWP*GRRGRVPAGPG Trigger: GCCTGGTCCAGCTGGGACCCTGCCTCGCCGGCCGCATGGCCAGAGGGTTGGGTGAGTGTGTATGGGGAAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507650.1 |
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| CDS CCA 72 bp | GCCCGTTGCTGCTCCGGCGGCGTGGCGCTCTGGGAGTaGTCTTCAGAAGTACCCGGGGTAGCTGCCGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARCCSGGVALWE*SSEVPGVAAER Trigger: CCTTTCGGCAGCTACCCCGGGTACTTCTGAAGACCACTCCCAGAGCGCCACGCCGCCGGAGCAGCAACGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 72 bp | TCCTCTGCCCGTTGCTGCTCCGGCGGCGTGGCGCTCTaGGAGTGGTCTTCAGAAGTACCCGGGGTAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSARCCSGGVAL*EWSSEVPGVAA Trigger: GGCAGCTACCCCGGGTACTTCTGAAGACCACTCCCAGAGCGCCACGCCGCCGGAGCAGCAACGGGCAGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 72 bp | CTGGCGCTCAGGGTAGCTAGGGCGCGGAGGCGGTGGTaGGTACAGCTCCTGGTGGTGATGCTGGAATCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LALRVARARRRW*VQLLVVMLESR Trigger: TCGGGATTCCAGCATCACCACCAGGAGCTGTACCCACCACCGCCTCCGCGCCCTAGCTACCCTGAGCGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CAA 72 bp | CTGGGCGCAGCGCCGGCCGGGGGTGCTGACCTGACTTaGGTGTTGGGGAGTCGGTGGTCCTTCTTCCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGAAPAGGADLT*VLGSRWSFFHF Trigger: GAAATGGAAGAAGGACCACCGACTCCCCAACACCAAAGTCAGGTCAGCACCCCCGGCCGGCGCTGCGCCCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CAA 90 bp | GAAAGGGTGCTGGGCGCAGCGCCGGCCGGGGGTGCTGACCTGACTTaGGTGTTGGGGAGTCGGTGGTCCTTCTTCCATTTCATGCGACGG | + |
|
Preference number: 6 (lower is better) Translates to: ERVLGAAPAGGADLT*VLGSRWSFFHFMRR Trigger: CCGTCGCATGAAATGGAAGAAGGACCACCGACTCCCCAACACCAAAGTCAGGTCAGCACCCCCGGCCGGCGCTGCGCCCAGCACCCTTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS GCA 72 bp | TTTCTGGAGGTCTGGGGGTTGAGCCCCCGCGAGCGCTaGTGTCACTCTCCCTCTCTCCCTCTCTGCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLEVWGLSPRER*CHSPSLPLCLS Trigger: AGAGAGGCAGAGAGGGAGAGAGGGAGAGTGACAGCAGCGCTCGCGGGGGCTCAACCCCCAGACCTCCAGAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000303406.4 |
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| CDS CCA 72 bp | GCCCCCGCTTGGCAAAATCGTGGCACCAGTGGGATCTaGGGAGCGGCCTTCAACTGCAACTGCGCGTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: APAWQNRGTSGI*GAAFNCNCASQ Trigger: TTGAGACGCGCAGTTGCAGTTGAAGGCCGCTCCCCAGATCCCACTGGTGCCACGATTTTGCCAAGCGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507650.1 |
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| CDS CAA 72 bp | CAAATGATTCTGACGTCATTTCTGGAGGTCTGGGGGTaGAGCCCCCGCGAGCGCTGCTGTCACTCTCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QMILTSFLEVWG*SPRERCCHSPS Trigger: AGAGGGAGAGTGACAGCAGCGCTCGCGGGGGCTCAACCCCCAGACCTCCAGAAATGACGTCAGAATCATTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000303406.4 |
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| CDS GCA 72 bp | ATGTTTTATAACCTGGTAATGTCCTCTGCCCGTTGCTaGTCCGGCGGCGTGGCGCTCTGGGAGTGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: MFYNLVMSSARC*SGGVALWEWSS Trigger: TGAAGACCACTCCCAGAGCGCCACGCCGCCGGAGCAGCAACGGGCAGAGGACATTACCAGGTTATAAAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS GCA 72 bp | GTTATGTTTTATAACCTGGTAATGTCCTCTGCCCGTTaGTGCTCCGGCGGCGTGGCGCTCTGGGAGTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VMFYNLVMSSAR*CSGGVALWEWS Trigger: AGACCACTCCCAGAGCGCCACGCCGCCGGAGCAGCAACGGGCAGAGGACATTACCAGGTTATAAAACATAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 72 bp | ACAGCTCCTGGTGGTGATGCTGGAATCCCGATTCCCTaGTCCGGCCGTAATATTCCGGACTGTGTTCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TAPGGDAGIPIP*SGRNIPDCVQG Trigger: TCCCTGAACACAGTCCGGAATATTACGGCCGGACCAGGGAATCGGGATTCCAGCATCACCACCAGGAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS GCA 72 bp | CAGAGTCTGCTCTTCAGCGTTCGCCTGGGATTCATTTaGGAAGATGTAACCTCTCTCACCATCGTCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSLLFSVRLGFI*EDVTSLTIVPS Trigger: GCTGGGGACGATGGTGAGAGAGGTTACATCTTCGCAAATGAATCCCAGGCGAACGCTGAAGAGCAGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507650.1 |
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| CDS CAA 72 bp | CCAGAGTCTGCTCTTCAGCGTTCGCCTGGGATTCATTaGCGAAGATGTAACCTCTCTCACCATCGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PESALQRSPGIH*RRCNLSHHRPQ Trigger: CTGGGGACGATGGTGAGAGAGGTTACATCTTCGCAAATGAATCCCAGGCGAACGCTGAAGAGCAGACTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507650.1 |
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| CDS CAA 72 bp | GTAATATTCCGGACTGTGTTCAGGGATGTAGCTATTTaGCGAATATTCTTCGCATGGAGGAAATTTCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VIFRTVFRDVAI*RIFFAWRKFRI Trigger: GATCCGAAATTTCCTCCATGCGAAGAATATTCGCAAAATAGCTACATCCCTGAACACAGTCCGGAATATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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| CDS CCA 72 bp | TTCAGGGATGTAGCTATTTTGCGAATATTCTTCGCATaGAGGAAATTTCGGATCGATGTAGTTAGAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FRDVAILRIFFA*RKFRIDVVRVH Trigger: ATGGACTCTAACTACATCGATCCGAAATTTCCTCCATGCGAAGAATATTCGCAAAATAGCTACATCCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303406.4 ENST00000430889.3 |
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