Pregenerated sensors for HOXB8 (Homo sapiens)
Ensembl gene IDs: ENSG00000120068Ensembl transcript IDs: ENST00000239144.5, ENST00000498634.2, ENST00000576562.1
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTATTGTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAACCACTAGCGGGGACTaGCGCGGCGGGGGACGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: FIVTLPPFSGADNRTKYRTTSGD*RGGGRC Trigger: GCAGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGT...TCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTACAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGAAGGGAGACAGAAAGAATTACGGCGTGAATAGGCAGTTTCATGTTGTTGGGCGAGGGAGCCTTTaGTTAAATCCTTTTCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: REKGDRKNYGVNRQFHVVGRGSL*LNPFLS Trigger: GGAAAGAAAAGGATTTAAGCAAAGGCTCCCTCGCCC...AACAACATGAAACTGCCTATTCACGCCGTAATTCTTTCTGTCTCCCTTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTTCACAGTAAACCTAAGAACACTTGTAACAATTGCCCACAGCGCGCATGCCAGAAATCGGTACCTTaGTCATTACAAAGAAGCACG | + |
|
Preference number: 2 (lower is better) Translates to: SLHSKPKNTCNNCPQRACQKSVP*SLQRST Trigger: CGTGCTTCTTTGTAATGACCAAGGTACCGATTTCTG...GCATGCGCGCTGTGGGCAATTGTTACAAGTGTTCTTAGGTTTACTGTGAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| 3UTR CCA 72 bp | AGGCCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTaGTCCGGTTCTCCCAAGACGAGGAATGAGGCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RPILHGKAFWGS*SGSPKTRNEAS Trigger: GCTCGCCTCATTCCTCGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGTGCTTGGGGCAGGTCTGTTCTTTATTAAACCAGGCCAATTCTGCACGGGGCCTTTTGGGGAAGTaGGTCCGGTTCTCCCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GGCLGQVCSLLNQANSARGLLGK*VRFSQD Trigger: GTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCC...CCGTGCAGAATTGGCCTGGTTTAATAAAGAACAGACCTGCCCCAAGCACCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTCTTCACAGTAAACCTAAGAACACTTGTAACAATTGCCCACAGCGCGCATAGGGCGAGGGAGCCTTaGCTTAAATCCTTTTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ILFTVNLRTLVTIAHSAHRAREP*LKSFSF Trigger: GAAAGAAAAGGATTTAAGCAAAGGCTCCCTCGCCCT...ATGCGCGCTGTGGGCAATTGTTACAAGTGTTCTTAGGTTTACTGTGAAGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTGTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAATAGGCAGTTTCATGTaGTTGGGAGAACTTAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FIVTLPPFSGADNRTKYRIGSFM*LGELSR Trigger: TCTGCTAAGTTCTCCCAACAACATGAAACTGCCTAT...TCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTACAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | TACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTGCGGTGGGAGTGGGCGACGGGCTCTaGTCGGAGCCCTCGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YEILPLAGTGAAGDAAVGVGDGL*SEPSAS Trigger: GGAGGCCGAGGGCTCCGAGCAGAGCCCGTCGCCCAC...TCCCACCGCAGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | TACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTGCGGTGGGAGACCGTACACCACGGTaGGTCGGCCGCCCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YEILPLAGTGAAGDAAVGDRTPR*VGRPGP Trigger: AGGACCTGGGCGGCCGACCCACCGTGGTGTACGGTC...TCCCACCGCAGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | TACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTGCGGTGGGAAGCTGCCGCCGCTGCTaGGACCGTACACCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YEILPLAGTGAAGDAAVGSCRRC*DRTPRW Trigger: CCACCGTGGTGTACGGTCCCAGCAGCGGCGGCAGCT...TCCCACCGCAGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | AGCCGGGCCTTTGCCGCTCGCCCTCACAGGGCGAGGGAGCCTTTGCTTAAATCCGGGCGGCCGCGGCCCTaGCAGTCCCAGCTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAFAARPHRAREPLLKSGRPRP*QSQLKP Trigger: AGGCTTCAGCTGGGACTGCCAGGGCCGCGGCCGCCC...GGATTTAAGCAAAGGCTCCCTCGCCCTGTGAGGGCGAGCGGCAAAGGCCCGGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | TACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTGCGGTGGGATTGCAGTCTGCGTACTaGACCAGGTCTGGATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YEILPLAGTGAAGDAAVGLQSAY*TRSGSC Trigger: GCAGGATCCAGACCTGGTGCAGTACGCAGACTGCAA...TCCCACCGCAGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | AGCCGGGCCTTTGCCGCTCGCCCTCACAGGGCGAGGGAGCCTTTGCTTAAATCCTGGCGGCGGCAAGCTTaGAGTCTGCGTACTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAFAARPHRAREPLLKSWRRQA*SLRTAP Trigger: TGGTGCAGTACGCAGACTGCAAGCTTGCCGCCGCCA...GGATTTAAGCAAAGGCTCCCTCGCCCTGTGAGGGCGAGCGGCAAAGGCCCGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGGATTGGGAGGGGAAATGAGGACGCAGCGAGAGAGAGCGAGAGCGAGAGCTTCTTGTCGCCCTTCTaGGCGTCGCCCTCGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERIGRGNEDAARESESESFLSPF*ASPSSA Trigger: GGCGGACGAGGGCGACGCGCAGAAGGGCGACAAGAA...GCTCTCGCTCTCGCTCTCTCTCGCTGCGTCCTCATTTCCCCTCCCAATCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTATTACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTTGGATTTGCGACGGGTaGTGGAAGCTGCCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSYYEILPLAGTGAAGDAWICDG*WKLPPL Trigger: CAGCGGCGGCAGCTTCCAGCACCCGTCGCAAATCCA...AGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTAATAGCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTATTACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTCGTAGCCGTAGAAATTaGCGGGGTCCCCGTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: RSYYEILPLAGTGAAGDARSRRN*RGPRGT Trigger: CGTGCCACGGGGACCCCGGCAATTTCTACGGCTACG...AGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTAATAGCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | CCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACGAGGAATGAGGCGAGCCTGGTTCTTGTCGCCCTTCTaGGCGTCGCCCTCGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFGEVGPVLPRRGMRRAWFLSPF*ASPSSA Trigger: GGCGGACGAGGGCGACGCGCAGAAGGGCGACAAGAA...CCAGGCTCGCCTCATTCCTCGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CCA 90 bp | AGCCGGGCCTTTGCCGCTCGCCCTCACAGGGCGAGGGAGCCTTTGCTTAAATCCGACCCCGCATCCTATTaGCTTCTTCGTACTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAFAARPHRAREPLLKSDPASY*LLRTPP Trigger: GGGAGGAGTACGAAGAAGCCAATAGGATGCGGGGTC...GGATTTAAGCAAAGGCTCCCTCGCCCTGTGAGGGCGAGCGGCAAAGGCCCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTATTACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTACCAGGTCTGGATCCTaGGCACCGAATAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSYYEILPLAGTGAAGDATRSGS*APNRLW Trigger: CCAGAGCCTATTCGGTGCGCAGGATCCAGACCTGGT...AGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTAATAGCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | AGGCCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGGTCAGTCCCAGGGCGTaGGATACCTCGATTCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RPILHGKAFWGSWSGSPKVSPRA*DTSIRR Trigger: GCGGCGAATCGAGGTATCGCACGCCCTGGGACTGAC...CTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACGAGGAATGAGGCGTTCTCCAGCTCCTCCTaGTCGCATTTGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKAFWGSWSGSPKTRNEAFSSSS*SHLLLG Trigger: CCCCAGCAGCAAATGCGAGCAGGAGGAGCTGGAGAA...CGCCTCATTCCTCGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACGAGGCCAGCCCACGGGCCTTaGACGCTGCCGTTTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILHGKAFWGSWSGSPKTRPAHGP*TLPFFL Trigger: CAAGAAAAACGGCAGCGTCCAAGGCCCGTGGGCTGG...CCTCGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCACAGTAAACCTAAGAACACTTGTAACAATTGCCCACAGCGCGCATGCACCACTAGCGGGGACTaGCGCGGCGGGGGACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHSKPKNTCNNCPQRACTTSGD*RGGGRC Trigger: GCAGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGT...GCATGCGCGCTGTGGGCAATTGTTACAAGTGTTCTTAGGTTTACTGTGAAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACGCGACTCTGTCTCTCTTaGTGCCCCAGATATGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PILHGKAFWGSWSGSPKTRLCLS*CPRYAG Trigger: GCCCGCATATCTGGGGCACCAAGAGAGACAGAGTCG...CGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CCA 90 bp | GCCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACGGAATGAGGCGAGCCTaGCTCACGACTCTGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ANSARQGLLGKLVRFSQDGMRRA*LTTLSL Trigger: GAGAGACAGAGTCGTGAGCCAGGCTCGCCTCATTCC...GTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACGAGGAATGAGGCGAGCCTGGCCTTTTGGGGAAGTTaGTCCGGTTCTCCCAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: AFWGSWSGSPKTRNEASLAFWGS*SGSPKT Trigger: CGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGC...CAGGCTCGCCTCATTCCTCGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGGTGCTTGGGGCAGGTCTGTTCTTTATTAAACCAGGCCAATTCTGCACGGTCCCAAGACGAGGAATaGGGCGAGCCTGGCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: GGCLGQVCSLLNQANSARSQDEE*GEPGSR Trigger: TCGTGAGCCAGGCTCGCCTCATTCCTCGTCTTGGGA...CCGTGCAGAATTGGCCTGGTTTAATAAAGAACAGACCTGCCCCAAGCACCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR GCA 90 bp | GTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAGGAAGCTGCCGCCGCTaGTGGGACCGTACACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VTLPPFSGADNRTKYRGTGSCRR*WDRTPR Trigger: CCGTGGTGTACGGTCCCAGCAGCGGCGGCAGCTTCC...TGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | ATTCTCTTCACAGTAAACCTAAGAACACTTGTAACAATTGCCCACAGCGCGCATTCTGTCGGCCTCGCCTaGGTCCGGCGGCTGCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ILFTVNLRTLVTIAHSAHSVGLA*VRRLLA Trigger: CGCAAGCAGCCGCCGGACGCAGGCGAGGCCGACAGA...ATGCGCGCTGTGGGCAATTGTTACAAGTGTTCTTAGGTTTACTGTGAAGAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGCTTGGGGCAGGTCTGTTCTTTATTAAACCAGGCCAATTCTGCACGGCAACTCTGTCTCTCTTGGTaGCCCAGATATGCGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCLGQVCSLLNQANSARQLCLSW*PRYAGG Trigger: TCCGCCCGCATATCTGGGGCACCAAGAGAGACAGAG...TTGCCGTGCAGAATTGGCCTGGTTTAATAAAGAACAGACCTGCCCCAAGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACGAGGAATGAGGCGGCTCGCATTTGCTGCTaGGGAACTTGTCTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKAFWGSWSGSPKTRNEAARICC*GTCLCC Trigger: ACAACAAAGACAAGTTCCCCAGCAGCAAATGCGAGC...CGCCTCATTCCTCGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCTATTACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTGAAAGAATTACGGCGTaGATAGGCAGTTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSYYEILPLAGTGAAGDAERITA*IGSFML Trigger: CAACATGAAACTGCCTATTCACGCCGTAATTCTTTC...AGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTAATAGCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | GTTTCATGTTGTTGGGAGAACTTAGCAGAAATCGGTACCTTGGTCATTACAAAGGCTCAGCCGGGCCTTTaGCGCTCGCCCTCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSCCWENLAEIGTLVITKAQPGL*RSPSQG Trigger: GCCCTGTGAGGGCGAGCGGCAAAGGCCCGGCTGAGC...CTTTGTAATGACCAAGGTACCGATTTCTGCTAAGTTCTCCCAACAACATGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | TTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAACAAAATGCTGGTAGGGAGCCGTaGACAGCGACGACGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FRPFQAQTTEQSIEEQQNAGREP*TATTAR Trigger: ACGGGCCGTCGTCGCTGTCCACGGCTCCCTACCAGC...ATTTTGTTGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGACCTCGCCCAGGCCGCTaGCGGCGGCAAGCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIVTLPPFSGADNRTKYRPRPGR*RRQACS Trigger: ACTGCAAGCTTGCCGCCGCCAGCGGCCTGGGCGAGG...TCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTACAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | AAGGGAAGGAGATCCACGGTAGCTCACACACAGAAGCTATTACGAGATACTACCGGCAAGCTTGCAGTCTaGGTACTGCACCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGRRSTVAHTQKLLRDTTGKLAV*VLHQVW Trigger: CCAGACCTGGTGCAGTACGCAGACTGCAAGCTTGCC...GGTAGTATCTCGTAATAGCTTCTGTGTGTGAGCTACCGTGGATCTCCTTCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | GGTCTGTTCTTTATTAAACCAGGCCAATTCTGCACGGCAAGGCCTTTTGGGGAATTGGTGCCCCAGATATaGGGGCGGAGATGGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLFFIKPGQFCTARPFGELVPQI*GRRWSK Trigger: CTTGCTCCATCTCCGCCCGCATATCTGGGGCACCAA...TTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCTGGTTTAATAAAGAACAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCACAGTAAACCTAAGAACACTTGTAACAATTGCCCACAGCGCGCATGCAAGTCTAAGCTTGCATaGCAGCCGCGGCTCGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHSKPKNTCNNCPQRACKSKLA*QPRLAR Trigger: GCGAGCGAGCCGCGGCTGCCATGCAAGCTTAGACTT...GCATGCGCGCTGTGGGCAATTGTTACAAGTGTTCTTAGGTTTACTGTGAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | TGTTGTTGGGAGAACTTAGCAGAAATCGGTACCTTGGTCATTACAAAGAAGCACAGGGGAAGAGCTGTGTaGGCGACGGGCTCTGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CCWENLAEIGTLVITKKHRGRAV*ATGSAR Trigger: CCGAGCAGAGCCCGTCGCCCACACAGCTCTTCCCCT...GTGCTTCTTTGTAATGACCAAGGTACCGATTTCTGCTAAGTTCTCCCAACAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | GTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAAGAAAGCCAGCGAGCTaGGGGGTTGCAGAGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTLPPFSGADNRTKYRGTRKPAS*GVAEGR Trigger: TCTCCCCTCTGCAACCCCCCAGCTCGCTGGCTTTCT...TGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAAGGGAGACAGAAAGAATTACGGCGTGAATAGGCAGTTTCATGTTGTTGTCAGTCCCAGGGCGTaGGATACCTCGATTCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: REKGDRKNYGVNRQFHVVVSPRA*DTSIRR Trigger: GCGGCGAATCGAGGTATCGCACGCCCTGGGACTGAC...AACAACATGAAACTGCCTATTCACGCCGTAATTCTTTCTGTCTCCCTTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTGGGGCAGGTCTGTTCTTTATTAAACCAGGCCAATTCTGCACGGCAAGGCCCTGCTCGCATTTGCTaGTGGGGAACTTGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLGQVCSLLNQANSARQGPARIC*WGTCLC Trigger: ACAAAGACAAGTTCCCCAGCAGCAAATGCGAGCAGG...GCCTTGCCGTGCAGAATTGGCCTGGTTTAATAAAGAACAGACCTGCCCCAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAACCAGGCCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGCCTCCTGCTCGCATTTaGTGCTGGGGAACTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIKPGQFCTARPFGEVGPPPARI*CWGTCL Trigger: AAGACAAGTTCCCCAGCAGCAAATGCGAGCAGGAGG...CGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCTGGTTTAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGGCAGGTCTGTTCTTTATTAAACCAGGCCAATTCTGCACGGCAAGGCCTTAAACCAGGCCAATTCTaGACGGCAAGGCCTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQVCSLLNQANSARQGLKPGQF*TARPFG Trigger: CCCAAAAGGCCTTGCCGTGCAGAATTGGCCTGGTTT...AAGGCCTTGCCGTGCAGAATTGGCCTGGTTTAATAAAGAACAGACCTGCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAACAAAATATTTGCGACGGGTGCTaGAAGCTGCCGCCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRPFQAQTTEQSIEEQQNICDGC*KLPPLL Trigger: CAGCAGCGGCGGCAGCTTCCAGCACCCGTCGCAAAT...ATTTTGTTGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTTCTTTATTAAACCAGGCCAATTCTGCACGGCAAGGCCTTTTGGGGAACACGGCAAGGCCTTTTaGGGAAGTTGGTCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLFFIKPGQFCTARPFGEHGKAF*GSWSGS Trigger: AGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTG...TTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCTGGTTTAATAAAGAACAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| 3UTR CAA 72 bp | TTATTAAACCAGGCCAATTCTGCACGGCAAGGCCTTTaGGGGAAGTTGGTCCGGTTCTCCCAAGACGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLNQANSARQGL*GKLVRFSQDEE Trigger: TTCCTCGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCTGGTTTAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR TCA 90 bp | TTTATTGTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGACCTGGCAGTCCCAGCTaGAGCCTACTTCTTGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIVTLPPFSGADNRTKYRPGSPS*SLLLVA Trigger: GGCGACAAGAAGTAGGCTTCAGCTGGGACTGCCAGG...TCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTACAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | TTCACGGATACAGAATACATTCTCTTCACAGTAAACCTAAGAACACTTGTAACAACGGGTGCTGGAAGCTaGCGCCGCTGCTGGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTEYILFTVNLRTLVTTGAGS*RRCWDR Trigger: ACGGTCCCAGCAGCGGCGGCAGCTTCCAGCACCCGT...TGTTACAAGTGTTCTTAGGTTTACTGTGAAGAGAATGTATTCTGTATCCGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAAGGGAGACAGAAAGAATTACGGCGTGAATAGGCAGTTTCATGTTGTTTTCTCCAGCTCCTCCTaGTCGCATTTGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: REKGDRKNYGVNRQFHVVFSSSS*SHLLLG Trigger: CCCCAGCAGCAAATGCGAGCAGGAGGAGCTGGAGAA...AACAACATGAAACTGCCTATTCACGCCGTAATTCTTTCTGTCTCCCTTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGACGCAGTCATAATAATTaGGGCGCAGGGACTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FIVTLPPFSGADNRTKYRRSHNN*GAGTPR Trigger: CCGGGGAGTCCCTGCGCCCCAATTATTATGACTGCG...TCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTACAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCACAGTAAACCTAAGAACACTTGTAACAATTGCCCACAGCGCGCATGCAAGAGCTCATTTTATTaGATTTTGAGGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHSKPKNTCNNCPQRACKSSFY*ILRRRR Trigger: CCGCCGCCGCCTCAAAATTCAATAAAATGAGCTCTT...GCATGCGCGCTGTGGGCAATTGTTACAAGTGTTCTTAGGTTTACTGTGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | TGTTGTTGGGAGAACTTAGCAGAAATCGGTACCTTGGTCATTACAAAGAAGCACCCTCCTGCTCGCATTTaGTGCTGGGGAACTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCWENLAEIGTLVITKKHPPARI*CWGTCL Trigger: AAGACAAGTTCCCCAGCAGCAAATGCGAGCAGGAGG...GTGCTTCTTTGTAATGACCAAGGTACCGATTTCTGCTAAGTTCTCCCAACAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | TTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAACAAAATGGGCGAGGGAGCCTTTaGTTAAATCCTTTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRPFQAQTTEQSIEEQQNGRGSL*LNPFLS Trigger: GGAAAGAAAAGGATTTAAGCAAAGGCTCCCTCGCCC...ATTTTGTTGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | ATTCTCTTCACAGTAAACCTAAGAACACTTGTAACAATTGCCCACAGCGCGCATGCTCGCATTTGCTGCTaGGGAACTTGTCTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILFTVNLRTLVTIAHSAHARICC*GTCLCC Trigger: ACAACAAAGACAAGTTCCCCAGCAGCAAATGCGAGC...ATGCGCGCTGTGGGCAATTGTTACAAGTGTTCTTAGGTTTACTGTGAAGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR TCA 90 bp | AAGGGAAGGAGATCCACGGTAGCTCACACACAGAAGCTATTACGAGATACTACCATAAACAGTTTTCGGTaGTTTACTTCCCTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KGRRSTVAHTQKLLRDTTINSFR*FTSLQM Trigger: CATTTGCAGGGAAGTAAATCACCGAAAACTGTTTAT...GGTAGTATCTCGTAATAGCTTCTGTGTGTGAGCTACCGTGGATCTCCTTCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR TCA 90 bp | TTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAACAAAATTGGAGAACAGTGAGTTaGCGAAATAAGAGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FRPFQAQTTEQSIEEQQNWRTVS*RNKSSF Trigger: AAATGAGCTCTTATTTCGTCAACTCACTGTTCTCCA...ATTTTGTTGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | GTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAATTTCGAAGAAGGGATaGCAGTTCATAAACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTLPPFSGADNRTKYRGTISKKG*QFINSF Trigger: AAAACTGTTTATGAACTGGCATCCCTTCTTCGAAAT...TGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR GCA 90 bp | TTCACGGATACAGAATACATTCTCTTCACAGTAAACCTAAGAACACTTGTAACACCTGCTCGCATTTGCTaGTGGGGAACTTGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTEYILFTVNLRTLVTPARIC*WGTCLC Trigger: ACAAAGACAAGTTCCCCAGCAGCAAATGCGAGCAGG...TGTTACAAGTGTTCTTAGGTTTACTGTGAAGAGAATGTATTCTGTATCCGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CCA 90 bp | TTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAACAAAATCCGACACACTTTTTGTaGTTTCCAGGAATAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRPFQAQTTEQSIEEQQNPTHFL*FPGIEK Trigger: CTTTTCTATTCCTGGAAACCACAAAAAGTGTGTCGG...ATTTTGTTGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS CCA 90 bp | GCCTGCGTCCGGCGGCTTGCGGGCGCATCCAGGGGAAGAGCTGTGTaGGCGACGGGCTCTGCTCGGAGCCCTCGGCCTCCTCGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ACVRRLAGASRGRAV*ATGSARSPRPPRPG Trigger: GCCTGGGCGAGGAGGCCGAGGGCTCCGAGCAGAGCCCGTCGCCCACACAGCTCTTCCCCTGGATGCGCCCGCAAGCCGCCGGACGCAGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576562.1 |
||
| CDS CCA 90 bp | TGCGTCCGGCGGCTGCTTGCGGGCGCATCCAGGGGAAGAGCTGTGTaGGCGACGGGCTCTGCTCGGAGCCCTCGGCCTCCTCGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVRRLLAGASRGRAV*ATGSARSPRPPRPG Trigger: GCCTGGGCGAGGAGGCCGAGGGCTCCGAGCAGAGCCCGTCGCCCACACAGCTCTTCCCCTGGATGCGCCCGCAAGCAGCCGCCGGACGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS GCA 90 bp | GCGGCCCTGGCAGTCCCAGCTGAAGCCTACTTCTTGTCGCCCTTCTaGGCGTCGCCCTCGTCCGCCGCCTCTGGGGCCCGCTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AALAVPAEAYFLSPF*ASPSSAASGARSSF Trigger: GAAGCTGGAGCGGGCCCCAGAGGCGGCGGACGAGGGCGACGCGCAGAAGGGCGACAAGAAGTAGGCTTCAGCTGGGACTGCCAGGGCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS CCA 90 bp | GCGACGGGCTCTGCTCGGAGCCCTCGGCCTCCTCGCCCAGGCCGCTaGCGGCGGCAAGCTTGCAGTCTGCGTACTGCACCAGGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ATGSARSPRPPRPGR*RRQACSLRTAPGLD Trigger: ATCCAGACCTGGTGCAGTACGCAGACTGCAAGCTTGCCGCCGCCAGCGGCCTGGGCGAGGAGGCCGAGGGCTCCGAGCAGAGCCCGTCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS GCA 90 bp | GGTAGAACTCCTGGATTTGCGACGGGTGCTGGAAGCTGCCGCCGCTaGTGGGACCGTACACCACGGTGGGTCGGCCGCCCAGGTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTPGFATGAGSCRR*WDRTPRWVGRPGPG Trigger: CCCAGGACCTGGGCGGCCGACCCACCGTGGTGTACGGTCCCAGCAGCGGCGGCAGCTTCCAGCACCCGTCGCAAATCCAGGAGTTCTACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS GCA 90 bp | ACGGCCCGTGGTAGAACTCCTGGATTTGCGACGGGTGCTGGAAGCTaGCGCCGCTGCTGGGACCGTACACCACGGTGGGTCGGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TARGRTPGFATGAGS*RRCWDRTPRWVGRP Trigger: TGGGCGGCCGACCCACCGTGGTGTACGGTCCCAGCAGCGGCGGCAGCTTCCAGCACCCGTCGCAAATCCAGGAGTTCTACCACGGGCCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS GCA 90 bp | CGGAGCCCTCGGCCTCCTCGCCCAGGCCGCTGGCGGCGGCAAGCTTaGAGTCTGCGTACTGCACCAGGTCTGGATCCTGCGCACCGAATA | + |
|
Preference number: 5 (lower is better) Translates to: RSPRPPRPGRWRRQA*SLRTAPGLDPAHRI Trigger: TATTCGGTGCGCAGGATCCAGACCTGGTGCAGTACGCAGACTGCAAGCTTGCCGCCGCCAGCGGCCTGGGCGAGGAGGCCGAGGGCTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS CCA 90 bp | AGAACTCCTGGATTTGCGACGGGTGCTGGAAGCTGCCGCCGCTGCTaGGACCGTACACCACGGTGGGTCGGCCGCCCAGGTCCTGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RTPGFATGAGSCRRC*DRTPRWVGRPGPGR Trigger: TCGCCCAGGACCTGGGCGGCCGACCCACCGTGGTGTACGGTCCCAGCAGCGGCGGCAGCTTCCAGCACCCGTCGCAAATCCAGGAGTTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS CCA 90 bp | CCCCGTGGCACGCCACGGCGCACGGGTTCTGCTGGTAGGGAGCCGTaGACAGCGACGACGGCCCGTGGTAGAACTCCTGGATTTGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: PRGTPRRTGSAGREP*TATTARGRTPGFAT Trigger: CGTCGCAAATCCAGGAGTTCTACCACGGGCCGTCGTCGCTGTCCACGGCTCCCTACCAGCAGAACCCGTGCGCCGTGGCGTGCCACGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS-3UTR CAA 90 bp | AGCCGGGCCTTTGCCGCTCGCCCTCACAGGGCGAGGGAGCCTTTGCTTAAATCCGCGTCCGGCGGCTGCTaGCGGGCGCATCCAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRAFAARPHRAREPLLKSASGGC*RAHPGE Trigger: TTCCCCTGGATGCGCCCGCAAGCAGCCGCCGGACGC...GGATTTAAGCAAAGGCTCCCTCGCCCTGTGAGGGCGAGCGGCAAAGGCCCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS GCA 90 bp | TCCTCGCCCAGGCCGCTGGCGGCGGCAAGCTTGCAGTCTGCGTACTaGACCAGGTCTGGATCCTGCGCACCGAATAGGCTCTGGCGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPRPLAAASLQSAY*TRSGSCAPNRLWRC Trigger: GCAACGCCAGAGCCTATTCGGTGCGCAGGATCCAGACCTGGTGCAGTACGCAGACTGCAAGCTTGCCGCCGCCAGCGGCCTGGGCGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS-3UTR CAA 90 bp | GAGAGGATTGGGAGGGGAAATGAGGACGCAGCGAGAGAGAGCGAGAGCGAGAGCGGCTCAGCCGGGCCTTaGCCGCTCGCCCTCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ERIGRGNEDAARESESESGSAGP*PLALTG Trigger: CCCTGTGAGGGCGAGCGGCAAAGGCCCGGCTGAGCC...GCTCTCGCTCTCGCTCTCTCTCGCTGCGTCCTCATTTCCCCTCCCAATCCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | AGCCGGGCCTTTGCCGCTCGCCCTCACAGGGCGAGGGAGCCTTTGCTTAAATCCGCTGAAGCCTACTTCTaGTCGCCCTTCTGCGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRAFAARPHRAREPLLKSAEAYF*SPFCAS Trigger: CGACGCGCAGAAGGGCGACAAGAAGTAGGCTTCAGC...GGATTTAAGCAAAGGCTCCCTCGCCCTGTGAGGGCGAGCGGCAAAGGCCCGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS CCA 90 bp | GGGGAAGTTGGTCCGGTTCTCCCAAGACGAGGAATGAGGCGAGCCTaGCTCACGACTCTGTCTCTCTTGGTGCCCCAGATATGCGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GEVGPVLPRRGMRRA*LTTLSLLVPQICGR Trigger: CCGCCCGCATATCTGGGGCACCAAGAGAGACAGAGTCGTGAGCCAGGCTCGCCTCATTCCTCGTCTTGGGAGAACCGGACCAACTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CAA 90 bp | AGCCGGGCCTTTGCCGCTCGCCCTCACAGGGCGAGGGAGCCTTTGCTTAAATCCGTAGAACTCCTGGATTaGCGACGGGTGCTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRAFAARPHRAREPLLKSVELLD*RRVLEA Trigger: AGCTTCCAGCACCCGTCGCAAATCCAGGAGTTCTAC...GGATTTAAGCAAAGGCTCCCTCGCCCTGTGAGGGCGAGCGGCAAAGGCCCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | GCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACGAGGAATGAGGCGAGCCTGGCACGGCAAGGCCTTTaGGGGAAGTTGGTCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFWGSWSGSPKTRNEASLARQGL*GKLVRF Trigger: GAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGC...CAGGCTCGCCTCATTCCTCGTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGTCCAGCCCACGGGCCTaGGACGCTGCCGTTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RPILHGKAFWGSWSGSPKSSPRA*DAAVFL Trigger: AAGAAAAACGGCAGCGTCCAAGGCCCGTGGGCTGGA...CTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGGGCCTTTTGGGGAAGTaGGTCCGGTTCTCCCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPILHGKAFWGSWSGSPKGLLGK*VRFSQD Trigger: GTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCC...CTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CAA 90 bp | GCCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACTCCTCCTGCTCGCATTaGCTGCTGGGGAACTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ANSARQGLLGKLVRFSQDSSCSH*LLGNLS Trigger: AGACAAGTTCCCCAGCAGCAAATGCGAGCAGGAGGA...GTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTATTACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTTCCCCGGTTTTGTATTaGGAGAACAGTGAGTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: RSYYEILPLAGTGAAGDASPVLY*ENSELT Trigger: CGTCAACTCACTGTTCTCCAAATACAAAACCGGGGA...AGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTAATAGCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTATTACGAGATACTACCACTAGCGGGGACTGGCGCGGCGGGGGACGCTATAGGCAGTTTCATGTaGTTGGGAGAACTTAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSYYEILPLAGTGAAGDAIGSFM*LGELSR Trigger: TCTGCTAAGTTCTCCCAACAACATGAAACTGCCTAT...AGCGTCCCCCGCCGCGCCAGTCCCCGCTAGTGGTAGTATCTCGTAATAGCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | GGTCTGTTCTTTATTAAACCAGGCCAATTCTGCACGGCAAGGCCTTTTGGGGAAACGCTGCCGTTTTTCTaGTCGCCCTTCTGCGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLFFIKPGQFCTARPFGETLPFF*SPFCAS Trigger: CGACGCGCAGAAGGGCGACAAGAAAAACGGCAGCGT...TTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCTGGTTTAATAAAGAACAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTAAACCAGGCCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGACGACTCTGTCTCTCTaGGTGCCCCAGATATGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FIKPGQFCTARPFGEVGPTTLSL*VPQICG Trigger: CCCGCATATCTGGGGCACCAAGAGAGACAGAGTCGT...CGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGCCTGGTTTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAAGGGAGACAGAAAGAATTACGGCGTGAATAGGCAGTTTCATGTTGTTCTGGCGGCGGCAAGCTaGCAGTCTGCGTACTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: REKGDRKNYGVNRQFHVVLAAAS*QSAYCT Trigger: GGTGCAGTACGCAGACTGCAAGCTTGCCGCCGCCAG...AACAACATGAAACTGCCTATTCACGCCGTAATTCTTTCTGTCTCCCTTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | GCCAATTCTGCACGGCAAGGCCTTTTGGGGAAGTTGGTCCGGTTCTCCCAAGACTTGCTGCTGGGGAACTaGTCTTTGTTGTTCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ANSARQGLLGKLVRFSQDLLLGN*SLLFSF Trigger: AAAAGAGAACAACAAAGACAAGTTCCCCAGCAGCAA...GTCTTGGGAGAACCGGACCAACTTCCCCAAAAGGCCTTGCCGTGCAGAATTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAAGGGAGACAGAAAGAATTACGGCGTGAATAGGCAGTTTCATGTTGTTTCCAAAAGTCTAAGCTaGCATGGCAGCCGCGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: REKGDRKNYGVNRQFHVVSKSLS*HGSRGS Trigger: CGAGCCGCGGCTGCCATGCAAGCTTAGACTTTTGGA...AACAACATGAAACTGCCTATTCACGCCGTAATTCTTTCTGTCTCCCTTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | TTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAACAAAATAGACCCCGCATCCTATaGGCTTCTTCGTACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FRPFQAQTTEQSIEEQQNRPRIL*ASSYSS Trigger: GGAGGAGTACGAAGAAGCCAATAGGATGCGGGGTCT...ATTTTGTTGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAAGGGAGACAGAAAGAATTACGGCGTGAATAGGCAGTTTCATGTTGTTTCCTCCTGCTCGCATTaGCTGCTGGGGAACTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: REKGDRKNYGVNRQFHVVSSCSH*LLGNLS Trigger: AGACAAGTTCCCCAGCAGCAAATGCGAGCAGGAGGA...AACAACATGAAACTGCCTATTCACGCCGTAATTCTTTCTGTCTCCCTTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | GTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAGCAGAAATCGGTACCTaGGTCATTACAAAGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VTLPPFSGADNRTKYRGTAEIGT*VITKKH Trigger: GTGCTTCTTTGTAATGACCAAGGTACCGATTTCTGC...TGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | GTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACATTGCTGCTGGGGAACTaGTCTTTGTTGTTCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VTLPPFSGADNRTKYRGTLLLGN*SLLFSF Trigger: AAAAGAGAACAACAAAGACAAGTTCCCCAGCAGCAA...TGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | TTTATTGTAACTCTTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAAGGGCGAGGGAGCCTTaGCTTAAATCCTTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FIVTLPPFSGADNRTKYRRAREP*LKSFSF Trigger: GAAAGAAAAGGATTTAAGCAAAGGCTCCCTCGCCCT...TCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAGAGTTACAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAAGGGAGACAGAAAGAATTACGGCGTGAATAGGCAGTTTCATGTTGTTTCTTTTCATGATCATTaGCATCCATTAGAGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: REKGDRKNYGVNRQFHVVSFHDH*HPLETP Trigger: CGGGGTCTCTAATGGATGCAAATGATCATGAAAAGA...AACAACATGAAACTGCCTATTCACGCCGTAATTCTTTCTGTCTCCCTTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAAGGGAGACAGAAAGAATTACGGCGTGAATAGGCAGTTTCATGTTGTTAAGCCGACACACTTTTaGTGGTTTCCAGGAATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: REKGDRKNYGVNRQFHVVKPTHF*WFPGIE Trigger: TTCTATTCCTGGAAACCACAAAAAGTGTGTCGGCTT...AACAACATGAAACTGCCTATTCACGCCGTAATTCTTTCTGTCTCCCTTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | GTTTCATGTTGTTGGGAGAACTTAGCAGAAATCGGTACCTTGGTCATTACAAAGGGCAGTTTCATGTTGTaGGGAGAACTTAGCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSCCWENLAEIGTLVITKGSFML*GELSRN Trigger: ATTTCTGCTAAGTTCTCCCAACAACATGAAACTGCC...CTTTGTAATGACCAAGGTACCGATTTCTGCTAAGTTCTCCCAACAACATGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS-3UTR CAA 90 bp | TTCCGCCCTTTTCAGGCGCAGACAACAGAACAAAGTATAGAGGAACAACAAAATTTCCCTGCAAATGAGTaGTTTCATATTTTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: FRPFQAQTTEQSIEEQQNFPANE*FHILHC Trigger: ACAGTGCAAAATATGAAACAACTCATTTGCAGGGAA...ATTTTGTTGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS CCA 72 bp | GGCCGGGACCCGCGGACGTGCGGGCGGCCGCGGCCCTaGCAGTCCCAGCTGAAGCCTACTTCTTGTCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRDPRTCGRPRP*QSQLKPTSCRP Trigger: AGGGCGACAAGAAGTAGGCTTCAGCTGGGACTGCCAGGGCCGCGGCCGCCCGCACGTCCGCGGGTCCCGGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS CAA 90 bp | GTGCGGGCGGCCGCGGCCCTGGCAGTCCCAGCTGAAGCCTACTTCTaGTCGCCCTTCTGCGCGTCGCCCTCGTCCGCCGCCTCTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRAAAALAVPAEAYF*SPFCASPSSAASGA Trigger: GGCCCCAGAGGCGGCGGACGAGGGCGACGCGCAGAAGGGCGACAAGAAGTAGGCTTCAGCTGGGACTGCCAGGGCCGCGGCCGCCCGCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS GCA 72 bp | CGCATCCAGGGGAAGAGCTGTGTGGGCGACGGGCTCTaGTCGGAGCCCTCGGCCTCCTCGCCCAGGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RIQGKSCVGDGL*SEPSASSPRPL Trigger: CAGCGGCCTGGGCGAGGAGGCCGAGGGCTCCGAGCAGAGCCCGTCGCCCACACAGCTCTTCCCCTGGATGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS CCA 72 bp | GGAAGCTGCCGCCGCTGCTGGGACCGTACACCACGGTaGGTCGGCCGCCCAGGTCCTGGGCGAAGCCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSCRRCWDRTPR*VGRPGPGRSRS Trigger: ACTGCGGCTTCGCCCAGGACCTGGGCGGCCGACCCACCGTGGTGTACGGTCCCAGCAGCGGCGGCAGCTTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS CCA 72 bp | CGGCGGCTTGCGGGCGCATCCAGGGGAAGAGCTGTGTaGGCGACGGGCTCTGCTCGGAGCCCTCGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRLAGASRGRAV*ATGSARSPRPP Trigger: AGGAGGCCGAGGGCTCCGAGCAGAGCCCGTCGCCCACACAGCTCTTCCCCTGGATGCGCCCGCAAGCCGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576562.1 |
||
| CDS GCA 72 bp | GGGCCTTGGACGCTGCCGTTTTTCTTGTCGCCCTTCTaGGCGTCGCCCTCGTCCGCCGCCTCTGGGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GPWTLPFFLSPF*ASPSSAASGAR Trigger: GCGGGCCCCAGAGGCGGCGGACGAGGGCGACGCGCAGAAGGGCGACAAGAAAAACGGCAGCGTCCAAGGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS CAA 72 bp | GCCGCGGCCCTGGCAGTCCCAGCTGAAGCCTACTTCTaGTCGCCCTTCTGCGCGTCGCCCTCGTCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAALAVPAEAYF*SPFCASPSSAA Trigger: GGCGGCGGACGAGGGCGACGCGCAGAAGGGCGACAAGAAGTAGGCTTCAGCTGGGACTGCCAGGGCCGCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS GCA 72 bp | CCTGGATTTGCGACGGGTGCTGGAAGCTGCCGCCGCTaGTGGGACCGTACACCACGGTGGGTCGGCCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGFATGAGSCRR*WDRTPRWVGRP Trigger: TGGGCGGCCGACCCACCGTGGTGTACGGTCCCAGCAGCGGCGGCAGCTTCCAGCACCCGTCGCAAATCCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS GCA 72 bp | GGCTCTGGCGTTGCAGCGGGTCGTAGCCGTAGAAATTaGCGGGGTCCCCGTGGCACGCCACGGCGCACGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSGVAAGRSRRN*RGPRGTPRRTG Trigger: ACCCGTGCGCCGTGGCGTGCCACGGGGACCCCGGCAATTTCTACGGCTACGACCCGCTGCAACGCCAGAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS GCA 72 bp | CGGCCTCCTCGCCCAGGCCGCTGGCGGCGGCAAGCTTaGAGTCTGCGTACTGCACCAGGTCTGGATCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RPPRPGRWRRQA*SLRTAPGLDPA Trigger: CGCAGGATCCAGACCTGGTGCAGTACGCAGACTGCAAGCTTGCCGCCGCCAGCGGCCTGGGCGAGGAGGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS GCA 72 bp | GCAGTCCCAGCTGAAGCCTACTTCTTGTCGCCCTTCTaGGCGTCGCCCTCGTCCGCCGCCTCTGGGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AVPAEAYFLSPF*ASPSSAASGAR Trigger: GCGGGCCCCAGAGGCGGCGGACGAGGGCGACGCGCAGAAGGGCGACAAGAAGTAGGCTTCAGCTGGGACTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239144.5 |
||
| CDS CCA 72 bp | GGATTTGCGACGGGTGCTGGAAGCTGCCGCCGCTGCTaGGACCGTACACCACGGTGGGTCGGCCGCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GFATGAGSCRRC*DRTPRWVGRPG Trigger: ACCTGGGCGGCCGACCCACCGTGGTGTACGGTCCCAGCAGCGGCGGCAGCTTCCAGCACCCGTCGCAAATCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS CAA 90 bp | TCGGAGCCCTCGGCCTCCTCGCCCAGGCCGCTGGCGGCGGCAAGCTaGCAGTCTGCGTACTGCACCAGGTCTGGATCCTGCGCACCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SEPSASSPRPLAAAS*QSAYCTRSGSCAPN Trigger: ATTCGGTGCGCAGGATCCAGACCTGGTGCAGTACGCAGACTGCAAGCTTGCCGCCGCCAGCGGCCTGGGCGAGGAGGCCGAGGGCTCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS GCA 72 bp | CTCGCCCAGGCCGCTGGCGGCGGCAAGCTTGCAGTCTaGGTACTGCACCAGGTCTGGATCCTGCGCACCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LAQAAGGGKLAV*VLHQVWILRTE Trigger: TTCGGTGCGCAGGATCCAGACCTGGTGCAGTACGCAGACTGCAAGCTTGCCGCCGCCAGCGGCCTGGGCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS CCA 72 bp | ACGCCACGGCGCACGGGTTCTGCTGGTAGGGAGCCGTaGACAGCGACGACGGCCCGTGGTAGAACTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TPRRTGSAGREP*TATTARGRTPG Trigger: TCCAGGAGTTCTACCACGGGCCGTCGTCGCTGTCCACGGCTCCCTACCAGCAGAACCCGTGCGCCGTGGCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS GCA 72 bp | AGGCCGCTGGCGGCGGCAAGCTTGCAGTCTGCGTACTaGACCAGGTCTGGATCCTGCGCACCGAATAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPLAAASLQSAY*TRSGSCAPNRL Trigger: GAGCCTATTCGGTGCGCAGGATCCAGACCTGGTGCAGTACGCAGACTGCAAGCTTGCCGCCGCCAGCGGCCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS CCA 72 bp | GGTGCTCCTAGGGCACAGGATCCAGCCCACGGGCCTTaGACGCTGCCGTTTTTCTTGTCGCCCTTCTGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GAPRAQDPAHGP*TLPFFLSPFCA Trigger: CGCGCAGAAGGGCGACAAGAAAAACGGCAGCGTCCAAGGCCCGTGGGCTGGATCCTGTGCCCTAGGAGCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS GCA 72 bp | AGCTTGCAGTCTGCGTACTGCACCAGGTCTGGATCCTaGGCACCGAATAGGCTCTGGCGTTGCAGCGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLQSAYCTRSGS*APNRLWRCSGS Trigger: CGACCCGCTGCAACGCCAGAGCCTATTCGGTGCGCAGGATCCAGACCTGGTGCAGTACGCAGACTGCAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239144.5 ENST00000576562.1 |
||
| CDS CAA 72 bp | GGAATGAGGCGAGCCTGGCTCACGACTCTGTCTCTCTaGGTGCCCCAGATATGCGGGCGGAGATGGAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GMRRAWLTTLSL*VPQICGRRWSK Trigger: CTTGCTCCATCTCCGCCCGCATATCTGGGGCACCAAGAGAGACAGAGTCGTGAGCCAGGCTCGCCTCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||
| CDS TCA 72 bp | TTGGGGAAGTTGGTCCGGTTCTCCCAAGACGAGGAATaGGGCGAGCCTGGCTCACGACTCTGTCTCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGKLVRFSQDEE*GEPGSRLCLSW Trigger: CCAAGAGAGACAGAGTCGTGAGCCAGGCTCGCCTCATTCCTCGTCTTGGGAGAACCGGACCAACTTCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498634.2 |
||