Pregenerated sensors for HOXB4 (Homo sapiens)
Ensembl gene IDs: ENSG00000182742Ensembl transcript IDs: ENST00000332503.6
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGAGTAGTGCCCAGCTCCCAGAACTCAACTGGCCCCTCACCCTaGCAAGCATGGCTTGGCTTGGCCTTTCAGAGGAAGGCCCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: GRVVPSSQNSTGPSP*QAWLGLAFQRKALP Trigger: CGGGAGGGCCTTCCTCTGAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCCAGTTGAGTTCTGGGAGCTGGGCACTACTCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR CCA 90 bp | TGCACTATCTGGCAGTCAGAGGGTGCTTTCGCTGGGTATCGGGAGTaGGGGACAAAGAAAGGAAATCCAGGCTGTCTTCCAGCAGCGGCA | + |
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Preference number: 1 (lower is better) Translates to: CTIWQSEGAFAGYRE*GTKKGNPGCLPAAA Trigger: TGCCGCTGCTGGAAGACAGCCTGGATTTCCTTTCTTTGTCCCCCACTCCCGATACCCAGCGAAAGCACCCTCTGACTGCCAGATAGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR CCA 90 bp | CACATTCATTTTCAGTCTAGGAGAGAGGCTTCTGCTGTACAACTCTaGACTGGCAGAGTAGTGCCCAGCTCCCAGAACTCAACTGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: HIHFQSRREASAVQL*TGRVVPSSQNSTGP Trigger: GGGGCCAGTTGAGTTCTGGGAGCTGGGCACTACTCTGCCAGTCCAGAGTTGTACAGCAGAAGCCTCTCTCCTAGACTGAAAATGAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR TCA 90 bp | GTGGGTGAGCAGTCATTCTGGCCCTCAGTGAATGGGCACGAAAGATaGGGGAGAGTGTGTGTGTGTTACCGTGACCAAAACACTGCACTA | + |
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Preference number: 1 (lower is better) Translates to: VGEQSFWPSVNGHER*GRVCVCYRDQNTAL Trigger: TAGTGCAGTGTTTTGGTCACGGTAACACACACACACTCTCCCTCATCTTTCGTGCCCATTCACTGAGGGCCAGAATGACTGCTCACCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR TCA 90 bp | TTCTCCTCGGCAGAGGAAACAAGACAGATGGGCCTGGACCTGGCGTaGTTAAAGATGAAACGTGGATCCATCTTCGCCAAAGCTGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: FSSAEETRQMGLDLA*LKMKRGSIFAKAEN Trigger: GTTTTCAGCTTTGGCGAAGATGGATCCACGTTTCATCTTTAATCACGCCAGGTCCAGGCCCATCTGTCTTGTTTCCTCTGCCGAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR GCA 90 bp | AATAATAATAAACGATGCAACATAATAAACTATGGGAGAGGGCTCTaGAACATCCTCCTCCCAGACTGGGAGGGGCACATTTTATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: NNNKRCNIINYGRGL*NILLPDWEGHILFP Trigger: AGGAAATAAAATGTGCCCCTCCCAGTCTGGGAGGAGGATGTTGCAGAGCCCTCTCCCATAGTTTATTATGTTGCATCGTTTATTATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR CCA 90 bp | AATGGTCGCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACAGATGGCCACCCCGAGGTTCGTaGCTCCCGCGTGCGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: NGRHRGPSSPRQRKQDRWPPRGS*LPRAGA Trigger: TGCCCCCGCACGCGGGAGCCACGAACCTCGGGGTGG...CCATCTGTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGCGACCATT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR CCA 90 bp | GTGCCCAGCTCCCAGAACTCAACTGGCCCCTCACCCTGCCAAGCATGGCTTGGCAGAGGGTGCTTTCGCTaGGTATCGGGAGTGGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: VPSSQNSTGPSPCQAWLGRGCFR*VSGVGD Trigger: GTCCCCCACTCCCGATACCCAGCGAAAGCACCCTCT...GCCAAGCCATGCTTGGCAGGGTGAGGGGCCAGTTGAGTTCTGGGAGCTGGGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR CCA 90 bp | GGCCCCTCACCCTGCCAAGCATGGCTTGGCTTGGCCTTTCAGAGGAAGGCCCTCACCCCACGGTGGAAGTaGGTGAGCAGTCATTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GPSPCQAWLGLAFQRKALTPRWK*VSSHSG Trigger: GCCAGAATGACTGCTCACCCACTTCCACCGTGGGGT...GAGGGCCTTCCTCTGAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGACTGGCAGAGTAGTGCCCAGCTCCCAGAACTCAACTGGCCCCTCACCCTGAATGGGCACGAAAGATaGGGGAGAGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LDWQSSAQLPELNWPLTLNGHER*GRVCVC Trigger: ACACACACACACTCTCCCTCATCTTTCGTGCCCATT...CAGGGTGAGGGGCCAGTTGAGTTCTGGGAGCTGGGCACTACTCTGCCAGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR GCA 90 bp | TGTACAACTCTGGACTGGCAGAGTAGTGCCCAGCTCCCAGAACTCAACTGGCCCCTGGCAGTCAGAGGGTaGTTTCGCTGGGTATCGGGA | + |
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Preference number: 2 (lower is better) Translates to: CTTLDWQSSAQLPELNWPLAVRG*FRWVSG Trigger: TCCCGATACCCAGCGAAAGCACCCTCTGACTGCCAG...GGGCCAGTTGAGTTCTGGGAGCTGGGCACTACTCTGCCAGTCCAGAGTTGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR CCA 90 bp | TCTAGGAGAGAGGCTTCTGCTGTACAACTCTGGACTGGCAGAGTAGTGCCCAGCCCCCCAACCCCACGGTaGAAGTGGGTGAGCAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: SRREASAVQLWTGRVVPSPPTPR*KWVSSH Trigger: ATGACTGCTCACCCACTTCCACCGTGGGGTTGGGGG...GCTGGGCACTACTCTGCCAGTCCAGAGTTGTACAGCAGAAGCCTCTCTCCTAGA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR GCA 90 bp | TATTCACACATACGAAGGGTTCTAGACTCAAGCAGCCCCAGAGGTAGGAAGGGGACCCCCTTCCCTACTTaGTCCCCTCCTCTGTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: YSHIRRVLDSSSPRGRKGTPFPT*SPPLLP Trigger: GGGCAACAGAGGAGGGGAGCAAGTAGGGAAGGGGGT...CCCCTTCCTACCTCTGGGGCTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR GCA 90 bp | TATTCACACATACGAAGGGTTCTAGACTCAAGCAGCCCCAGAGGTAGGAAGGGGACTGGCCCCTCACCCTaGCAAGCATGGCTTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: YSHIRRVLDSSSPRGRKGTGPSP*QAWLGL Trigger: CAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCCAGT...CCCCTTCCTACCTCTGGGGCTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR CCA 90 bp | GTGCCCAGCTCCCAGAACTCAACTGGCCCCTCACCCTGCCAAGCATGGCTTGGCTTCGTATATAAAGTGTaGGGGAGGGCAGATAGATTT | + |
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Preference number: 2 (lower is better) Translates to: VPSSQNSTGPSPCQAWLGFVYKV*GRADRF Trigger: AAATCTATCTGCCCTCCCCCACACTTTATATACGAA...GCCAAGCCATGCTTGGCAGGGTGAGGGGCCAGTTGAGTTCTGGGAGCTGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR CAA 90 bp | CTTTCAGAGGAAGGCCCTCCCGGGTCTCTGAGTCTCTCTTTTTCCTaGGACTCAATTTTCCTGCTCACTCCTGAGTTGTCAAGGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: LSEEGPPGSLSLSFS*DSIFLLTPELSRPP Trigger: GGGTGGCCTTGACAACTCAGGAGTGAGCAGGAAAATTGAGTCCAAGGAAAAAGAGAGACTCAGAGACCCGGGAGGGCCTTCCTCTGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR GCA 90 bp | ATTTTCCTGCTCACTCCTGAGTTGTCAAGGCCACCCCCTTCCCTACTTGCTCCCCCCCTCCCCCTCTTCTaGGTTTATTCGTATATAAAG | + |
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Preference number: 2 (lower is better) Translates to: IFLLTPELSRPPPSLLAPPLPLF*VYSYIK Trigger: CTTTATATACGAATAAACGCAGAAGAGGGGGAGGGG...GGGAGCAAGTAGGGAAGGGGGTGGCCTTGACAACTCAGGAGTGAGCAGGAAAAT 51% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR TCA 90 bp | GTCACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGTTTCCTGCTCACTCCTaGGTTGTCAAGGCCACCCCC | + |
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Preference number: 2 (lower is better) Translates to: VTLYSTQIFTHTKGSRLKFPAHS*VVKATP Trigger: GGGGGTGGCCTTGACAACTCAGGAGTGAGCAGGAAA...CTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR TCA 90 bp | GTCACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGCATCTTCGCCAAAGCTaGAAACGAGGAGCTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: VTLYSTQIFTHTKGSRLKHLRQS*KRGAAA Trigger: GGCTGCAGCTCCTCGTTTTCAGCTTTGGCGAAGATG...CTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR CCA 90 bp | ATTTTCCTGCTCACTCCTGAGTTGTCAAGGCCACCCCCTTCCCTACTTGCTCCCATTAAAGATGAAACGTaGATCCATCTTCGCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: IFLLTPELSRPPPSLLAPIKDET*IHLRQS Trigger: GCTTTGGCGAAGATGGATCCACGTTTCATCTTTAAT...GGGAGCAAGTAGGGAAGGGGGTGGCCTTGACAACTCAGGAGTGAGCAGGAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR CCA 90 bp | GTCACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGAAGCATGGCTTGGCTTaGCCTTTCAGAGGAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: VTLYSTQIFTHTKGSRLKKHGLA*PFRGRP Trigger: GGGCCTTCCTCTGAAAGGCCAAGCCAAGCCATGCTT...CTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGCAGCTGCCAAGCATGGCTTaGCTTGGCCTTTCAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: TLYSTQIFTHTKGSRLKQLPSMA*LGLSEE Trigger: TTCCTCTGAAAGGCCAAGCCAAGCCATGCTTGGCAG...CTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR GCA 72 bp | GTGCCCAGCTCCCAGAACTCAACTGGCCCCTCACCCTaGCAAGCATGGCTTGGCTTGGCCTTTCAGAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VPSSQNSTGPSP*QAWLGLAFQRK Trigger: CTTCCTCTGAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCCAGTTGAGTTCTGGGAGCTGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR CCA 72 bp | TGGCAGTCAGAGGGTGCTTTCGCTGGGTATCGGGAGTaGGGGACAAAGAAAGGAAATCCAGGCTGTCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: WQSEGAFAGYRE*GTKKGNPGCLP Trigger: TGGAAGACAGCCTGGATTTCCTTTCTTTGTCCCCCACTCCCGATACCCAGCGAAAGCACCCTCTGACTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGTGTGTGTGTGTTACCGTGACCAAAACACTGCACTATCTGGCAGTCAGACGAGCCGGGCCTCATTaGTTAGCGGGTGTCGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: GECVCVTVTKTLHYLAVRRAGPH*LAGVEV Trigger: TACCTCGACACCCGCTAACAAATGAGGCCCGGCTCG...TCTGACTGCCAGATAGTGCAGTGTTTTGGTCACGGTAACACACACACACTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR CCA 72 bp | TTTCAGTCTAGGAGAGAGGCTTCTGCTGTACAACTCTaGACTGGCAGAGTAGTGCCCAGCTCCCAGAACTCA | + |
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Preference number: 3 (lower is better) Translates to: FQSRREASAVQL*TGRVVPSSQNS Trigger: TGAGTTCTGGGAGCTGGGCACTACTCTGCCAGTCCAGAGTTGTACAGCAGAAGCCTCTCTCCTAGACTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR TCA 72 bp | CAGTCATTCTGGCCCTCAGTGAATGGGCACGAAAGATaGGGGAGAGTGTGTGTGTGTTACCGTGACCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: QSFWPSVNGHER*GRVCVCYRDQN Trigger: GTTTTGGTCACGGTAACACACACACACTCTCCCTCATCTTTCGTGCCCATTCACTGAGGGCCAGAATGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR TCA 72 bp | GCAGAGGAAACAAGACAGATGGGCCTGGACCTGGCGTaGTTAAAGATGAAACGTGGATCCATCTTCGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: AEETRQMGLDLA*LKMKRGSIFAK Trigger: TTTGGCGAAGATGGATCCACGTTTCATCTTTAATCACGCCAGGTCCAGGCCCATCTGTCTTGTTTCCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| 3UTR TCA 72 bp | ATTAAAGATGAAACGTGGATCCATCTTCGCCAAAGCTaGAAACGAGGAGCTGCAGCCTCCTCCTATTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: IKDETWIHLRQS*KRGAAASSYFS Trigger: AGAGAAATAGGAGGAGGCTGCAGCTCCTCGTTTTCAGCTTTGGCGAAGATGGATCCACGTTTCATCTTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR TCA 90 bp | GGCCCCTCACCCTGCCAAGCATGGCTTGGCTTGGCCTTTCAGAGGAAGGCCCTCAGGGGGCCCTCCGGCTaGGCCTGCCGCACCACCCGA | + |
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Preference number: 4 (lower is better) Translates to: GPSPCQAWLGLAFQRKALRGPSG*ACRTTR Trigger: TCGGGTGGTGCGGCAGGCTCAGCCGGAGGGCCCCCT...GAGGGCCTTCCTCTGAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | GGCCCCTCACCCTGCCAAGCATGGCTTGGCTTGGCCTTTCAGAGGAAGGCCCTCCCACCCCGAGGTTCGTaGCTCCCGCGTGCGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GPSPCQAWLGLAFQRKALPPRGS*LPRAGA Trigger: TGCCCCCGCACGCGGGAGCCACGAACCTCGGGGTGG...GAGGGCCTTCCTCTGAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | CTGGACTGGCAGAGTAGTGCCCAGCTCCCAGAACTCAACTGGCCCCTCACCCTGCGGAGTGGGACGGGCTaGGGTGCAGGGGGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LDWQSSAQLPELNWPLTLRSGTG*GAGGSG Trigger: CCCAGAACCCCCTGCACCCCAGCCCGTCCCACTCCG...CAGGGTGAGGGGCCAGTTGAGTTCTGGGAGCTGGGCACTACTCTGCCAGTCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | GGCCCCTCACCCTGCCAAGCATGGCTTGGCTTGGCCTTTCAGAGGAAGGCCCTCACTGGCCCCTCACCCTaGCAAGCATGGCTTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GPSPCQAWLGLAFQRKALTGPSP*QAWLGL Trigger: CAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCCAGT...GAGGGCCTTCCTCTGAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR TCA 90 bp | CTGGACTGGCAGAGTAGTGCCCAGCTCCCAGAACTCAACTGGCCCCTCACCCTGCACGGTGGAAGTGGGTaGGCAGTCATTCTGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LDWQSSAQLPELNWPLTLHGGSG*AVILAL Trigger: GAGGGCCAGAATGACTGCTCACCCACTTCCACCGTG...CAGGGTGAGGGGCCAGTTGAGTTCTGGGAGCTGGGCACTACTCTGCCAGTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR TCA 90 bp | GGCCCCTCACCCTGCCAAGCATGGCTTGGCTTGGCCTTTCAGAGGAAGGCCCTCTTTCCTGCTCACTCCTaGGTTGTCAAGGCCACCCCC | + |
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Preference number: 4 (lower is better) Translates to: GPSPCQAWLGLAFQRKALFPAHS*VVKATP Trigger: GGGGGTGGCCTTGACAACTCAGGAGTGAGCAGGAAA...GAGGGCCTTCCTCTGAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | GCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACAGATGGGCCTGGAACCCCCTTCCCTACTTaGTCCCCTCCTCTGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ATEARLLLGRGNKTDGPGTPFPT*SPPLLP Trigger: GGGCAACAGAGGAGGGGAGCAAGTAGGGAAGGGGGT...TCCAGGCCCATCTGTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | AATGGTCGCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACAGATGGCCCCGCCGGCGTAATTaGGGTTTACCGTGCTCACGT | + |
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Preference number: 4 (lower is better) Translates to: NGRHRGPSSPRQRKQDRWPRRRN*GLPCSR Trigger: ACGTGAGCACGGTAAACCCCAATTACGCCGGCGGGG...CCATCTGTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGCGACCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | AATGGTCGCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACAGATGGAGAGGGTGCTTTCGCTaGGTATCGGGAGTGGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: NGRHRGPSSPRQRKQDRWRGCFR*VSGVGD Trigger: GTCCCCCACTCCCGATACCCAGCGAAAGCACCCTCT...CCATCTGTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGCGACCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR TCA 90 bp | CGCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACAGATGGGCCTGGAATGGGCACGAAAGATaGGGGAGAGTGTGTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: RHRGPSSPRQRKQDRWAWNGHER*GRVCVC Trigger: ACACACACACACTCTCCCTCATCTTTCGTGCCCATT...CCAGGCCCATCTGTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAACTGGCCCCTCACCCTGCCAAGCATGGCTTGGCTTGGCCTTTCGGTGAGCAGTCATTCTaGCCCTCAGTGAATGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PRTQLAPHPAKHGLAWPFGEQSF*PSVNGH Trigger: GTGCCCATTCACTGAGGGCCAGAATGACTGCTCACC...GAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCCAGTTGAGTTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR TCA 90 bp | AATGGTCGCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACAGATGGCATCTTCGCCAAAGCTaGAAACGAGGAGCTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: NGRHRGPSSPRQRKQDRWHLRQS*KRGAAA Trigger: GGCTGCAGCTCCTCGTTTTCAGCTTTGGCGAAGATG...CCATCTGTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGCGACCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | CTTTTTCCTTGGACTCAATTTTCCTGCTCACTCCTGAGTTGTCAAGGCCACCCCGAGAGGCAGAGCGCGTaGGCGATCTCCACCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LFPWTQFSCSLLSCQGHPERQSA*AISTLR Trigger: CCGGAGGGTGGAGATCGCCCACGCGCTCTGCCTCTC...GGGGTGGCCTTGACAACTCAGGAGTGAGCAGGAAAATTGAGTCCAAGGAAAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTCACTCCTGAGTTGTCAAGGCCACCCCCTTCCCTACTTGCTCCCCTCCACCCGAGCGGATCTTaGTGTTGGGCAACTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: FLLTPELSRPPPSLLAPLHPSGS*CWATCG Trigger: ACCACAAGTTGCCCAACACCAAGATCCGCTCGGGTG...GAGGGGAGCAAGTAGGGAAGGGGGTGGCCTTGACAACTCAGGAGTGAGCAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTCACTCCTGAGTTGTCAAGGCCACCCCCTTCCCTACTTGCTCCCCTCCTGGCCCTCAGTGAATaGGCACGAAAGATGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLLTPELSRPPPSLLAPLLALSE*ARKMRE Trigger: CTCCCTCATCTTTCGTGCCCATTCACTGAGGGCCAG...GAGGGGAGCAAGTAGGGAAGGGGGTGGCCTTGACAACTCAGGAGTGAGCAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAACTGGCCCCTCACCCTGCCAAGCATGGCTTGGCTTGGCCTTTCCTGCCAAGCATGGCTTaGCTTGGCCTTTCAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PRTQLAPHPAKHGLAWPFLPSMA*LGLSEE Trigger: TTCCTCTGAAAGGCCAAGCCAAGCCATGCTTGGCAG...GAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGAGGGGCCAGTTGAGTTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | CGAGGTAATGGTCGCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACTGTACAACTCTGGACTaGCAGAGTAGTGCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RGNGRHRGPSSPRQRKQDCTTLD*QSSAQL Trigger: GAGCTGGGCACTACTCTGCCAGTCCAGAGTTGTACA...GTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGCGACCATTACCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | GGAGAGTGTGTGTGTGTTACCGTGACCAAAACACTGCACTATCTGGCAGTCAGAAGACGACGGGCTCTTTaGACGCGGAGTGGGACGGGC | + |
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Preference number: 4 (lower is better) Translates to: GECVCVTVTKTLHYLAVRRRRAL*TRSGTG Trigger: GCCCGTCCCACTCCGCGTGCAAAGAGCCCGTCGTCT...TCTGACTGCCAGATAGTGCAGTGTTTTGGTCACGGTAACACACACACACTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | AGCCGGGCCTCATTTGTTAGCGGGTGTCGAGGTAATGGTCGCCACCGAGGCCCGCCCCTCCCCCTCTTCTaGGTTTATTCGTATATAAAG | + |
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Preference number: 4 (lower is better) Translates to: SRASFVSGCRGNGRHRGPPLPLF*VYSYIK Trigger: CTTTATATACGAATAAACGCAGAAGAGGGGGAGGGG...CGGGCCTCGGTGGCGACCATTACCTCGACACCCGCTAACAAATGAGGCCCGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | ATTTTCCTGCTCACTCCTGAGTTGTCAAGGCCACCCCCTTCCCTACTTGCTCCCACCCCACGGTGGAAGTaGGTGAGCAGTCATTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IFLLTPELSRPPPSLLAPTPRWK*VSSHSG Trigger: GCCAGAATGACTGCTCACCCACTTCCACCGTGGGGT...GGGAGCAAGTAGGGAAGGGGGTGGCCTTGACAACTCAGGAGTGAGCAGGAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | AATGGTCGCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACAGATGGTCTGCTGTACAACTCTaGACTGGCAGAGTAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: NGRHRGPSSPRQRKQDRWSAVQL*TGRVVP Trigger: GGGCACTACTCTGCCAGTCCAGAGTTGTACAGCAGA...CCATCTGTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGCGACCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR TCA 90 bp | TGTACAACTCTGGACTGGCAGAGTAGTGCCCAGCTCCCAGAACTCAACTGGCCCGGCCTGGACCTGGCGTaGTTAAAGATGAAACGTGGA | + |
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Preference number: 4 (lower is better) Translates to: CTTLDWQSSAQLPELNWPGLDLA*LKMKRG Trigger: TCCACGTTTCATCTTTAATCACGCCAGGTCCAGGCC...GGGCCAGTTGAGTTCTGGGAGCTGGGCACTACTCTGCCAGTCCAGAGTTGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | CGAGGTAATGGTCGCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACAATTGGGGTTTACCGTaGTCACGTGAACTTTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: RGNGRHRGPSSPRQRKQDNWGLP*SRELCA Trigger: TGCGCAAAGTTCACGTGAGCACGGTAAACCCCAATT...GTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGCGACCATTACCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | GAGCTGCAGCCTCCTCCTATTTCTCTTTCTGTCTTTTTCTTTCTTCCTTCTTCTTGGGACGGGCTGGGGTaGAGGGGGTTCTGGGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: ELQPPPISLSVFFFLPSSWDGLG*RGFWAQ Trigger: CTGCGCCCAGAACCCCCTGCACCCCAGCCCGTCCCA...AGAAGAAGGAAGAAAGAAAAAGACAGAAAGAGAAATAGGAGGAGGCTGCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | TGCAACATAATAAACTATGGGAGAGGGCTCTGCAACATCCTCCTCCCAGACTGGCTGGCAGTCAGAGGGTaGTTTCGCTGGGTATCGGGA | + |
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Preference number: 4 (lower is better) Translates to: CNIINYGRGLCNILLPDWLAVRG*FRWVSG Trigger: TCCCGATACCCAGCGAAAGCACCCTCTGACTGCCAG...CCAGTCTGGGAGGAGGATGTTGCAGAGCCCTCTCCCATAGTTTATTATGTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | GAGCTGCAGCCTCCTCCTATTTCTCTTTCTGTCTTTTTCTTTCTTCCTTCTTCTTCTTTGCACGCGGAGTaGGACGGGCTGGGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ELQPPPISLSVFFFLPSSSLHAE*DGLGCR Trigger: CCTGCACCCCAGCCCGTCCCACTCCGCGTGCAAAGA...AGAAGAAGGAAGAAAGAAAAAGACAGAAAGAGAAATAGGAGGAGGCTGCAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | TGCAACATAATAAACTATGGGAGAGGGCTCTGCAACATCCTCCTCCCAGACTGGAAGCATGGCTTGGCTTaGCCTTTCAGAGGAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: CNIINYGRGLCNILLPDWKHGLA*PFRGRP Trigger: GGGCCTTCCTCTGAAAGGCCAAGCCAAGCCATGCTT...CCAGTCTGGGAGGAGGATGTTGCAGAGCCCTCTCCCATAGTTTATTATGTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | GTCACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGCCCCCAACCCCACGGTaGAAGTGGGTGAGCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VTLYSTQIFTHTKGSRLKPPTPR*KWVSSH Trigger: ATGACTGCTCACCCACTTCCACCGTGGGGTTGGGGG...CTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR TCA 90 bp | TATTCACACATACGAAGGGTTCTAGACTCAAGCAGCCCCAGAGGTAGGAAGGGGGTGTGTGTGTTACCGTaGCCAAAACACTGCACTATC | + |
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Preference number: 4 (lower is better) Translates to: YSHIRRVLDSSSPRGRKGVCVLP*PKHCTI Trigger: GATAGTGCAGTGTTTTGGTCACGGTAACACACACAC...CCCCTTCCTACCTCTGGGGCTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR TCA 90 bp | ACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGCAGTTTACCGTGCTCACGTaGACTTTGCGCATCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: TLYSTQIFTHTKGSRLKQFTVLT*TLRIQG Trigger: CCCCTGGATGCGCAAAGTTCACGTGAGCACGGTAAA...CTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | ACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGCAGTCACCCTGCCAAGCATaGCTTGGCTTGGCCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TLYSTQIFTHTKGSRLKQSPCQA*LGLAFQ Trigger: CTGAAAGGCCAAGCCAAGCCATGCTTGGCAGGGTGA...CTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | TCTAGGAGAGAGGCTTCTGCTGTACAACTCTGGACTGGCAGAGTAGTGCCCAGCCAACATAATAAACTATaGGAGAGGGCTCTGCAACAT | + |
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Preference number: 4 (lower is better) Translates to: SRREASAVQLWTGRVVPSQHNKL*ERALQH Trigger: ATGTTGCAGAGCCCTCTCCCATAGTTTATTATGTTG...GCTGGGCACTACTCTGCCAGTCCAGAGTTGTACAGCAGAAGCCTCTCTCCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | GTCACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGTGCTCACGTGAACTTTaGGCATCCAGGGGTAGACGA | + |
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Preference number: 4 (lower is better) Translates to: VTLYSTQIFTHTKGSRLKCSREL*ASRGRR Trigger: TCGTCTACCCCTGGATGCGCAAAGTTCACGTGAGCA...CTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | TATTCACACATACGAAGGGTTCTAGACTCAAGCAGCCCCAGAGGTAGGAAGGGGTGGACTCAATTTTCCTaGTCACTCCTGAGTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: YSHIRRVLDSSSPRGRKGWTQFS*SLLSCQ Trigger: TTGACAACTCAGGAGTGAGCAGGAAAATTGAGTCCA...CCCCTTCCTACCTCTGGGGCTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR GCA 90 bp | GAGCTGCAGCCTCCTCCTATTTCTCTTTCTGTCTTTTTCTTTCTTCCTTCTTCTTATGGGAGAGGGCTCTaGAACATCCTCCTCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: ELQPPPISLSVFFFLPSSYGRGL*NILLPD Trigger: GTCTGGGAGGAGGATGTTGCAGAGCCCTCTCCCATA...AGAAGAAGGAAGAAAGAAAAAGACAGAAAGAGAAATAGGAGGAGGCTGCAGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | GTCACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGAGGAAACAAGACAGATaGGCCTGGACCTGGCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: VTLYSTQIFTHTKGSRLKRKQDR*AWTWRD Trigger: ATCACGCCAGGTCCAGGCCCATCTGTCTTGTTTCCT...CTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | TATTCACACATACGAAGGGTTCTAGACTCAAGCAGCCCCAGAGGTAGGAAGGGGGAAGGGGCCTGGTTTTaGAATGTCAGAAAGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: YSHIRRVLDSSSPRGRKGEGAWF*NVRKRK Trigger: TTTTCTCTTTCTGACATTCCAAAACCAGGCCCCTTC...CCCCTTCCTACCTCTGGGGCTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | TATTCACACATACGAAGGGTTCTAGACTCAAGCAGCCCCAGAGGTAGGAAGGGGATTAAAGATGAAACGTaGATCCATCTTCGCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: YSHIRRVLDSSSPRGRKGIKDET*IHLRQS Trigger: GCTTTGGCGAAGATGGATCCACGTTTCATCTTTAAT...CCCCTTCCTACCTCTGGGGCTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | ACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCAAGCAGAAACACTGCACTATCTaGCAGTCAGAGGGTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TLYSTQIFTHTKGSRLKQKHCTI*QSEGAF Trigger: GAAAGCACCCTCTGACTGCCAGATAGTGCAGTGTTT...CTGCTTGAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CCA 90 bp | ATTGTCACTCTGTACAGCACACAGATATTCACACATACGAAGGGTTCTAGACTCTTCGTATATAAAGTGTaGGGGAGGGCAGATAGATTT | + |
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Preference number: 4 (lower is better) Translates to: IVTLYSTQIFTHTKGSRLFVYKV*GRADRF Trigger: AAATCTATCTGCCCTCCCCCACACTTTATATACGAA...GAGTCTAGAACCCTTCGTATGTGTGAATATCTGTGTGCTGTACAGAGTGACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS GCA 90 bp | CGGTGCACGCCGCGCGCCGCCCGAAGCCCGCCTCCGGCTGGAAGCTaGTCTCTCGCCTCTGGCCGCCGGCGTAGTACCCGGGCGAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RCTPRAARSPPPAGS*SLASGRRRSTRASG Trigger: ACCACTCGCCCGGGTACTACGCCGGCGGCCAGAGGCGAGAGAGCAGCTTCCAGCCGGAGGCGGGCTTCGGGCGGCGCGCGGCGTGCACCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS TCA 90 bp | GAGCGCGCGGGGGCCTCCATTGGGCCGGCCAGGGGGCCCTCCGGCTaGGCCTGCCGCACCACCCGAGCGGATCTTGGTGTTGGGCAACTT | + |
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Preference number: 5 (lower is better) Translates to: ERAGASIGPARGPSG*ACRTTRADLGVGQL Trigger: AAGTTGCCCAACACCAAGATCCGCTCGGGTGGTGCGGCAGGCTCAGCCGGAGGGCCCCCTGGCCGGCCCAATGGAGGCCCCCGCGCGCTC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CAA 90 bp | AGCCGGGCCTCATTTGTTAGCGGGTGTCGAGGTAATGGTCGCCACCGAGGCCCGCCACCCGAGCGGATCTaGGTGTTGGGCAACTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SRASFVSGCRGNGRHRGPPPERI*VLGNLW Trigger: CCACAAGTTGCCCAACACCAAGATCCGCTCGGGTGG...CGGGCCTCGGTGGCGACCATTACCTCGACACCCGCTAACAAATGAGGCCCGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS CCA 90 bp | TCTCTCGCCTCTGGCCGCCGGCGTAGTACCCGGGCGAGTGGTCGCTaGGTAGGTAATCGCTCTGTGAATATTCCTCGCATGGAGGGAACT | + |
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Preference number: 5 (lower is better) Translates to: SLASGRRRSTRASGR*VGNRSVNIPRMEGT Trigger: AGTTCCCTCCATGCGAGGAATATTCACAGAGCGATTACCTACCCAGCGACCACTCGCCCGGGTACTACGCCGGCGGCCAGAGGCGAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CAA 90 bp | CGAGGTAATGGTCGCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACCAAGCATGGCTTGGCTaGGCCTTTCAGAGGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: RGNGRHRGPSSPRQRKQDQAWLG*AFQRKA Trigger: GGCCTTCCTCTGAAAGGCCAAGCCAAGCCATGCTTG...GTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGCGACCATTACCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CAA 90 bp | GCCACCGAGGCCCGTCTTCTCCTCGGCAGAGGAAACAAGACAGATGGGCCTGGAGGAAGGGGCCTGGTTTaGGAATGTCAGAAAGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: ATEARLLLGRGNKTDGPGGRGLV*ECQKEK Trigger: TTTCTCTTTCTGACATTCCAAAACCAGGCCCCTTCC...TCCAGGCCCATCTGTCTTGTTTCCTCTGCCGAGGAGAAGACGGGCCTCGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS-3UTR CAA 90 bp | GAGCTGCAGCCTCCTCCTATTTCTCTTTCTGTCTTTTTCTTTCTTCCTTCTTCTCGAGCCGGGCCTCATTaGTTAGCGGGTGTCGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: ELQPPPISLSVFFFLPSSRAGPH*LAGVEV Trigger: TACCTCGACACCCGCTAACAAATGAGGCCCGGCTCG...AGAAGAAGGAAGAAAGAAAAAGACAGAAAGAGAAATAGGAGGAGGCTGCAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS GCA 72 bp | CCGCGCGCCGCCCGAAGCCCGCCTCCGGCTGGAAGCTaGTCTCTCGCCTCTGGCCGCCGGCGTAGTACCCGG | + |
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Preference number: 6 (lower is better) Translates to: PRAARSPPPAGS*SLASGRRRSTR Trigger: CCGGGTACTACGCCGGCGGCCAGAGGCGAGAGAGCAGCTTCCAGCCGGAGGCGGGCTTCGGGCGGCGCGCGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS TCA 72 bp | GGGGCCTCCATTGGGCCGGCCAGGGGGCCCTCCGGCTaGGCCTGCCGCACCACCCGAGCGGATCTTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: GASIGPARGPSG*ACRTTRADLGV Trigger: AACACCAAGATCCGCTCGGGTGGTGCGGCAGGCTCAGCCGGAGGGCCCCCTGGCCGGCCCAATGGAGGCCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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| CDS CCA 72 bp | TCTGGCCGCCGGCGTAGTACCCGGGCGAGTGGTCGCTaGGTAGGTAATCGCTCTGTGAATATTCCTCGCATG | + |
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Preference number: 6 (lower is better) Translates to: SGRRRSTRASGR*VGNRSVNIPRM Trigger: CATGCGAGGAATATTCACAGAGCGATTACCTACCCAGCGACCACTCGCCCGGGTACTACGCCGGCGGCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332503.6 |
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