Pregenerated sensors for HOXA7 (Homo sapiens)
Ensembl gene IDs: ENSG00000122592Ensembl transcript IDs: ENST00000242159.5, ENST00000519842.1, ENST00000523796.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAACCCCAGGATGGAGCTGAGCAGGGTACAGGACAACACAGGAGATaGAGGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGT | + |
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Preference number: 1 (lower is better) Translates to: EPQDGAEQGTGQHRR*RALRRALDLPTHYS Trigger: ACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTCCTGTGTTGTCCTGTACCCTGCTCAGCTCCATCCTGGGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 90 bp | GCTGGGTGTCTGCCAGTGTTGGGATACATAGGGACTTCCTGGGAATaGAGGCCCTCTGGGGCTGGATACATAGGTAGTTTGGGGGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: AGCLPVLGYIGTSWE*RPSGAGYIGSLGVP Trigger: AGGCACCCCCAAACTACCTATGTATCCAGCCCCAGAGGGCCTCCATTCCCAGGAAGTCCCTATGTATCCCAACACTGGCAGACACCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 90 bp | GGTGGTGCTGGGTGTCTGCCAGTGTTGGGATACATAGGGACTTCCTaGGAATGGAGGCCCTCTGGGGCTGGATACATAGGTAGTTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: GGAGCLPVLGYIGTS*EWRPSGAGYIGSLG Trigger: CCCCAAACTACCTATGTATCCAGCCCCAGAGGGCCTCCATTCCCAGGAAGTCCCTATGTATCCCAACACTGGCAGACACCCAGCACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR GCA 90 bp | AACATTCCCCTCCAGAAGTGGGGGTTGATGGGCCTGAGCTGTGGGTaGCAAGCCAGAGAAGGAGGGATTGATTCTAGGGTGCAAGCACTT | + |
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Preference number: 1 (lower is better) Translates to: NIPLQKWGLMGLSCG*QAREGGIDSRVQAL Trigger: AAGTGCTTGCACCCTAGAATCAATCCCTCCTTCTCTGGCTTGGCACCCACAGCTCAGGCCCATCAACCCCCACTTCTGGAGGGGAATGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR GCA 90 bp | GTAGGTAGTAGTGAGATTCACTTTCTTGCGGGTCTGGGAGGGTGGTaGTGGGTGTCTGCCAGTGTTGGGATACATAGGGACTTCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: VGSSEIHFLAGLGGW*WVSASVGIHRDFLG Trigger: TCCCAGGAAGTCCCTATGTATCCCAACACTGGCAGACACCCAGCACCACCCTCCCAGACCCGCAAGAAAGTGAATCTCACTACTACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR GCA 90 bp | ATGGAGCTGAGCAGGGTACAGGACAACACAGGAGATGAAGGGCATTaGGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: MELSRVQDNTGDEGH*GGHWTSPPTTVNSR Trigger: TCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTCCTGTGTTGTCCTGTACCCTGCTCAGCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 90 bp | GGTAGTAGTGAGATTCACTTTCTTGCGGGTCTGGGAGGGTGGTGCTaGGTGTCTGCCAGTGTTGGGATACATAGGGACTTCCTGGGAATG | + |
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Preference number: 1 (lower is better) Translates to: GSSEIHFLAGLGGWC*VSASVGIHRDFLGM Trigger: CATTCCCAGGAAGTCCCTATGTATCCCAACACTGGCAGACACCCAGCACCACCCTCCCAGACCCGCAAGAAAGTGAATCTCACTACTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 90 bp | GGAGTAGGTAGTAGTGAGATTCACTTTCTTGCGGGTCTGGGAGGGTaGTGCTGGGTGTCTGCCAGTGTTGGGATACATAGGGACTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GVGSSEIHFLAGLGG*CWVSASVGIHRDFL Trigger: CAGGAAGTCCCTATGTATCCCAACACTGGCAGACACCCAGCACCACCCTCCCAGACCCGCAAGAAAGTGAATCTCACTACTACCTACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 90 bp | AGGGTACAGGACAACACAGGAGATGAAGGGCATTGCGGAGGGCATTaGACCTCCCCACCCACTACAGTTAACTCAAGACAACATACCATG | + |
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Preference number: 1 (lower is better) Translates to: RVQDNTGDEGHCGGH*TSPPTTVNSRQHTM Trigger: CATGGTATGTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTCCTGTGTTGTCCTGTACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR GCA 90 bp | ATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAACATACCATaGTACAAAGTCACCCCATTAACACATCCTTTCCAAGTCAAGACA | + |
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Preference number: 1 (lower is better) Translates to: IGPPHPLQLTQDNIP*YKVTPLTHPFQVKT Trigger: TGTCTTGACTTGGAAAGGATGTGTTAATGGGGTGACTTTGTAGCATGGTATGTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CAA 90 bp | CAGATCTGCAGCCAGCTCAGGAACATTCCCCTCCAGAAGTGGGGGTaGATGGGCCTGAGCTGTGGGTGCCAAGCCAGAGAAGGAGGGATT | + |
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Preference number: 2 (lower is better) Translates to: QICSQLRNIPLQKWG*MGLSCGCQAREGGI Trigger: AATCCCTCCTTCTCTGGCTTGGCACCCACAGCTCAGGCCCATCAACCCCCACTTCTGGAGGGGAATGTTCCTGAGCTGGCTGCAGATCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CCA 90 bp | CACAGTCCTGCTAAGCAGAAGCTAACCCACAGATCTGCAGCCAGCTCAGGAACAGCGGGTCTGGGAGGGTaGTGCTGGGTGTCTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: HSPAKQKLTHRSAASSGTAGLGG*CWVSAS Trigger: ACTGGCAGACACCCAGCACCACCCTCCCAGACCCGC...TGTTCCTGAGCTGGCTGCAGATCTGTGGGTTAGCTTCTGCTTAGCAGGACTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR GCA 90 bp | GGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAACAGGCGACCCAGTCTCTaGGGCCGCTCAGTCCACAAA | + |
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Preference number: 2 (lower is better) Translates to: GIAEGIGPPHPLQLTQDNRRPSL*GRSVHK Trigger: TTTGTGGACTGAGCGGCCGCAGAGACTGGGTCGCCT...GTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR GCA 90 bp | GGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAACGGTCTGGGAGGGTGGTaGTGGGTGTCTGCCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: GIAEGIGPPHPLQLTQDNGLGGW*WVSASV Trigger: AACACTGGCAGACACCCAGCACCACCCTCCCAGACC...GTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR GCA 90 bp | GAGATGAAGGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTAAGCAGCAGGGGACTTaGCTGGGAGCAGTCGGCACT | + |
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Preference number: 2 (lower is better) Translates to: EMKGIAEGIGPPHPLQLTKQQGT*LGAVGT Trigger: AGTGCCGACTGCTCCCAGGCAAGTCCCCTGCTGCTT...AGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CCA 90 bp | CACAGTCCTGCTAAGCAGAAGCTAACCCACAGATCTGCAGCCAGCTCAGGAACACTGGGAGGGTGGTGCTaGGTGTCTGCCAGTGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: HSPAKQKLTHRSAASSGTLGGWC*VSASVG Trigger: CCCAACACTGGCAGACACCCAGCACCACCCTCCCAG...TGTTCCTGAGCTGGCTGCAGATCTGTGGGTTAGCTTCTGCTTAGCAGGACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CCA 90 bp | GATACAGGAGCCAGAGGAAAGGACAGCGAAGCTGGAAGCATCTCCACAGTCCTGGATGGGCCTGAGCTGTaGGTGCCAAGCCAGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: DTGARGKDSEAGSISTVLDGPEL*VPSQRR Trigger: CCTTCTCTGGCTTGGCACCCACAGCTCAGGCCCATC...CAGGACTGTGGAGATGCTTCCAGCTTCGCTGTCCTTTCCTCTGGCTCCTGTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAGAAGGAGGGATTGATTCTAGGGTGCAAGCACTTAGGATGCTTTTTGGAGGGAGCTGGAGTAGGTaGTGGGGGTGGGTAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: AREGGIDSRVQALRMLFGGSWSR*WGWVEC Trigger: GCACTCTACCCACCCCCATCACCTACTCCAGCTCCC...TCCAAAAAGCATCCTAAGTGCTTGCACCCTAGAATCAATCCCTCCTTCTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CCA 90 bp | CGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTGCCTTCCAGGGCCGGCTGGCCTaGGGTTGGGGGTGTCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: RIFIFGYIKHSWAGKCAFQGRLA*GWGCLL Trigger: CAAAAGACACCCCCAACCCCAGGCCAGCCGGCCCTG...GAAGGCACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR GCA 90 bp | CGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTGCCTTCTTTCCGACTGTCCGGTaGAGAGAGGGCCCCGGATCG | + |
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Preference number: 2 (lower is better) Translates to: RIFIFGYIKHSWAGKCAFFPTVR*REGPGS Trigger: CGATCCGGGGCCCTCTCTGCACCGGACAGTCGGAAA...GAAGGCACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CCA 90 bp | CCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTGCCGTTGGGGGTGTCTTTTaGGGTCCTCGGAGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PRIFIFGYIKHSWAGKCAVGGVF*GPRRQR Trigger: CCTCTGCCTCCGAGGACCCCAAAAGACACCCCCAAC...GGCACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR GCA 90 bp | GGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAACGGATTGATTCTAGGGTaGAAGCACTTAGGATGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GIAEGIGPPHPLQLTQDNGLILG*KHLGCF Trigger: AAAGCATCCTAAGTGCTTGCACCCTAGAATCAATCC...GTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CCA 90 bp | AACTCAAGACAACATACCATGCTACAAAGTCACCCCATTAACACATCCTTTCCAGGGACTTCCTGGGAATaGAGGCCCTCTGGGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: NSRQHTMLQSHPINTSFPGTSWE*RPSGAG Trigger: TCCAGCCCCAGAGGGCCTCCATTCCCAGGAAGTCCC...TGGAAAGGATGTGTTAATGGGGTGACTTTGTAGCATGGTATGTTGTCTTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CCA 90 bp | GTCACCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTACATAGGGACTTCCTaGGAATGGAGGCCCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VTTHLYFRLHKTQLGWEVYIGTS*EWRPSG Trigger: CCCAGAGGGCCTCCATTCCCAGGAAGTCCCTATGTA...CACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR GCA 90 bp | GGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAACTCCAAGTCAAGACACTaGCTTACAAATGAACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: GIAEGIGPPHPLQLTQDNSKSRH*LTNELQ Trigger: TTGGAGTTCATTTGTAAGGCAGTGTCTTGACTTGGA...GTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CCA 90 bp | AACTCAAGACAACATACCATGCTACAAAGTCACCCCATTAACACATCCTTTCCAAGCAGGGGACTTGCCTaGGAGCAGTCGGCACTAGGT | + |
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Preference number: 2 (lower is better) Translates to: NSRQHTMLQSHPINTSFPSRGLA*EQSALG Trigger: ACCTAGTGCCGACTGCTCCCAGGCAAGTCCCCTGCT...TGGAAAGGATGTGTTAATGGGGTGACTTTGTAGCATGGTATGTTGTCTTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR GCA 72 bp | CTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTaGGGCCGCTCAGTCCACAAAAGTTGGGAGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: LGGRGNPRRPSL*GRSVHKSWELE Trigger: CTCCAGCTCCCAACTTTTGTGGACTGAGCGGCCGCAGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 72 bp | CAAAAGCTGCGGGCTGTAAGCAGCAGGGGACTTGCCTaGGAGCAGTCGGCACTAGGTAGCAGGCAAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: QKLRAVSSRGLA*EQSALGSRQAS Trigger: GCTGGCTTGCCTGCTACCTAGTGCCGACTGCTCCCAGGCAAGTCCCCTGCTGCTTACAGCCCGCAGCTTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 72 bp | ATCTGCAGCCAGCTCAGGAACATTCCCCTCCAGAAGTaGGGGTTGATGGGCCTGAGCTGTGGGTGCCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: ICSQLRNIPLQK*GLMGLSCGCQA Trigger: GGCTTGGCACCCACAGCTCAGGCCCATCAACCCCCACTTCTGGAGGGGAATGTTCCTGAGCTGGCTGCAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR TCA 72 bp | GATGGAGCTGAGCAGGGTACAGGACAACACAGGAGATaGAGGGCATTGCGGAGGGCATTGGACCTCCCCACC | + |
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Preference number: 3 (lower is better) Translates to: DGAEQGTGQHRR*RALRRALDLPT Trigger: GGTGGGGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTCCTGTGTTGTCCTGTACCCTGCTCAGCTCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGGAGCAGTCGGCACTAGGTAGCAGGCAAGCCAGCCAGCACAAAATAGGTGGGTGTCTGCCAGTGTaGGGATACATAGGGACTTCC | + |
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Preference number: 3 (lower is better) Translates to: AWEQSALGSRQASQHKIGGCLPV*GYIGTS Trigger: GGAAGTCCCTATGTATCCCAACACTGGCAGACACCC...ACCTATTTTGTGCTGGCTGGCTTGCCTGCTACCTAGTGCCGACTGCTCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CAA 90 bp | GATACAGGAGCCAGAGGAAAGGACAGCGAAGCTGGAAGCATCTCCACAGTCCTGGTGCTAGGTAGTATTTaGGACGCGCCAGAGCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: DTGARGKDSEAGSISTVLVLGSI*DAPEQG Trigger: GCCCTGCTCTGGCGCGTCCAAAATACTACCTAGCAC...CAGGACTGTGGAGATGCTTCCAGCTTCGCTGTCCTTTCCTCTGGCTCCTGTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR GCA 72 bp | AGCAGGGTACAGGACAACACAGGAGATGAAGGGCATTaGGGAGGGCATTGGACCTCCCCACCCACTACAGTT | + |
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Preference number: 3 (lower is better) Translates to: SRVQDNTGDEGH*GGHWTSPPTTV Trigger: AACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTCCTGTGTTGTCCTGTACCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 72 bp | GGGTGTCTGCCAGTGTTGGGATACATAGGGACTTCCTaGGAATGGAGGCCCTCTGGGGCTGGATACATAGGT | + |
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Preference number: 3 (lower is better) Translates to: GCLPVLGYIGTS*EWRPSGAGYIG Trigger: ACCTATGTATCCAGCCCCAGAGGGCCTCCATTCCCAGGAAGTCCCTATGTATCCCAACACTGGCAGACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CAA 90 bp | GGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAAGTGAGATTCACTTTCTaGCGGGTCTGGGAGGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: GHCGGHWTSPPTTVNSRQVRFTF*RVWEGG Trigger: ACCACCCTCCCAGACCCGCAAGAAAGTGAATCTCAC...TTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 72 bp | CTGCCAGTGTTGGGATACATAGGGACTTCCTGGGAATaGAGGCCCTCTGGGGCTGGATACATAGGTAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LPVLGYIGTSWE*RPSGAGYIGSL Trigger: CAAACTACCTATGTATCCAGCCCCAGAGGGCCTCCATTCCCAGGAAGTCCCTATGTATCCCAACACTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 72 bp | AGTAGTGAGATTCACTTTCTTGCGGGTCTGGGAGGGTaGTGCTGGGTGTCTGCCAGTGTTGGGATACATAGG | + |
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Preference number: 3 (lower is better) Translates to: SSEIHFLAGLGG*CWVSASVGIHR Trigger: CCTATGTATCCCAACACTGGCAGACACCCAGCACCACCCTCCCAGACCCGCAAGAAAGTGAATCTCACTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CAA 90 bp | GTCACCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGGCATTGCGGAGGGCATaGGACCTCCCCACCCACTAC | + |
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Preference number: 3 (lower is better) Translates to: VTTHLYFRLHKTQLGWEVALRRA*DLPTHY Trigger: GTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGC...CACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CCA 72 bp | GACAACACAGGAGATGAAGGGCATTGCGGAGGGCATTaGACCTCCCCACCCACTACAGTTAACTCAAGACAA | + |
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Preference number: 3 (lower is better) Translates to: DNTGDEGHCGGH*TSPPTTVNSRQ Trigger: TTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTCCTGTGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR-3UTR CAA 90 bp | CCTCCCCACCCACTACAGTTAACTCAAGACAACATACCATGCTACAAAGTCACCGGATACATAGGTAGTTaGGGGGTGCCTCGAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: PPHPLQLTQDNIPCYKVTGYIGS*GVPRAE Trigger: CTCTGCTCGAGGCACCCCCAAACTACCTATGTATCC...GGTGACTTTGTAGCATGGTATGTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR GCA 72 bp | CCCCACCCACTACAGTTAACTCAAGACAACATACCATaGTACAAAGTCACCCCATTAACACATCCTTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: PHPLQLTQDNIP*YKVTPLTHPFQ Trigger: TTGGAAAGGATGTGTTAATGGGGTGACTTTGTAGCATGGTATGTTGTCTTGAGTTAACTGTAGTGGGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR GCA 90 bp | CCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGCGGCCGCTCAGTCCAGCCTCAGCCGCGCCATaGAGCGCGCCCTCGTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: PRRQRESKATQSLRPLSPASAAP*SAPSSV Trigger: GACGGACGAGGGCGCGCTGCATGGCGCGGCTGAGGC...TGGACTGAGCGGCCGCAGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CAA 72 bp | GGGTGCCTCGAGCAGAGGCCTGTGCTAGGTAGTATTTaGGACGCGCCAGAGCAGGGCCGGCTGGCCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GCLEQRPVLGSI*DAPEQGRLAWG Trigger: ACCCCAGGCCAGCCGGCCCTGCTCTGGCGCGTCCAAAATACTACCTAGCACAGGCCTCTGCTCGAGGCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CCA 90 bp | GGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAATGTCCGCGGCAGCAGTaGCGGCGGCAGAGGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: GHCGGHWTSPPTTVNSRQCPRQQ*RRQRAR Trigger: CCGTGCCCTCTGCCGCCGCCACTGCTGCCGCGGACA...TTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CCA 90 bp | GGGTGTCTTTTGGGGTCCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTCAGGGCCGGCTGGCCTaGGGTTGGGGGTGTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: GCLLGSSEAEGIQGDPVSQGRLA*GWGCLL Trigger: CAAAAGACACCCCCAACCCCAGGCCAGCCGGCCCTG...AGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGGACCCCAAAAGACACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CCA 90 bp | TCTTTTGGGGTCCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGCGGCGGGACTTCCTGGGAATaGAGGCCCTCTGGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SFGVLGGRGNPRRPSLCGGTSWE*RPSGAG Trigger: TCCAGCCCCAGAGGGCCTCCATTCCCAGGAAGTCCC...GCCGCAGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGGACCCCAAAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CCA 90 bp | GGGTGTCTTTTGGGGTCCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGTCGGCTCGGCATTTTaGAACAGAGAAGCCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: GCLLGSSEAEGIQGDPVSVGSAF*NREAPA Trigger: GGCGGGGGCTTCTCTGTTCCAAAATGCCGAGCCGAC...AGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGGACCCCAAAAGACACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| 3UTR CAA 72 bp | AGCCAGCTCAGGAACATTCCCCTCCAGAAGTGGGGGTaGATGGGCCTGAGCTGTGGGTGCCAAGCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQLRNIPLQKWG*MGLSCGCQARE Trigger: TTCTCTGGCTTGGCACCCACAGCTCAGGCCCATCAACCCCCACTTCTGGAGGGGAATGTTCCTGAGCTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR TCA 90 bp | CCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGCGGCCGCTCAGTCCAGATAAAGGGGGCTGTTaGCATTGTATAAGCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRRQRESKATQSLRPLSPDKGGC*HCISPE Trigger: TTCCGGGCTTATACAATGTCAACAGCCCCCTTTATC...TGGACTGAGCGGCCGCAGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGTCTTTTGGGGTCCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTCTTTGGCGAGGTCACTaGAGAGCCCGGGGATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GCLLGSSEAEGIQGDPVSLWRGH*RARGCF Trigger: AAAACATCCCCGGGCTCTGCAGTGACCTCGCCAAAG...AGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGGACCCCAAAAGACACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | AAACCAGTGAGTCTCTTAAAGACGCTTTTCCGACTGTCCGGTGCAGAGAGGGCCCGTGGGCGATTTCAATaGGGCGGCGCCGCGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPVSLLKTLFRLSGAERARGRFQ*GGAASG Trigger: ACCTGACGCGGCGCCGCCGCATTGAAATCGCCCACG...GGCCCTCTCTGCACCGGACAGTCGGAAAAGCGTCTTTAAGAGACTCACTGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | GATACAGGAGCCAGAGGAAAGGACAGCGAAGCTGGAAGCATCTCCACAGTCCTGTTTCCGACTGTCCGGTaGAGAGAGGGCCCCGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: DTGARGKDSEAGSISTVLFPTVR*REGPGS Trigger: CGATCCGGGGCCCTCTCTGCACCGGACAGTCGGAAA...CAGGACTGTGGAGATGCTTCCAGCTTCGCTGTCCTTTCCTCTGGCTCCTGTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | AGGGTACAGGACAACACAGGAGATGAAGGGCATTGCGGAGGGCATTGGACCTCCAGGCGACCCAGTCTCTaGGGCCGCTCAGTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVQDNTGDEGHCGGHWTSRRPSL*GRSVHK Trigger: TTTGTGGACTGAGCGGCCGCAGAGACTGGGTCGCCT...GGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTCCTGTGTTGTCCTGTACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR TCA 90 bp | CACAGTCCTGCTAAGCAGAAGCTAACCCACAGATCTGCAGCCAGCTCAGGAACAGGGAGCTGGAGTAGGTaGTGGGGGTGGGTAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSPAKQKLTHRSAASSGTGSWSR*WGWVEC Trigger: GCACTCTACCCACCCCCATCACCTACTCCAGCTCCC...TGTTCCTGAGCTGGCTGCAGATCTGTGGGTTAGCTTCTGCTTAGCAGGACTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCACCCACTACAGTTAACTCAAGACAACATACCATGCTACAAAGTCACCAGGCGCAGGGCAGGTTaGCGTAGGCGTCGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPHPLQLTQDNIPCYKVTRRRAG*RRRRRP Trigger: TGGGCGCCGACGCCTACGGCAACCTGCCCTGCGCCT...GGTGACTTTGTAGCATGGTATGTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | AAACCAGTGAGTCTCTTAAAGACGCTTTTCCGACTGTCCGGTGCAGAGAGGGCCTGTCGCAGGCGCCTTTaGCGAGGTCACTGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPVSLLKTLFRLSGAERACRRRL*RGHCRA Trigger: GGCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGACA...GGCCCTCTCTGCACCGGACAGTCGGAAAAGCGTCTTTAAGAGACTCACTGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | GGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAAAGCAGGGGACTTGCCTaGGAGCAGTCGGCACTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHCGGHWTSPPTTVNSRQSRGLA*EQSALG Trigger: ACCTAGTGCCGACTGCTCCCAGGCAAGTCCCCTGCT...TTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | GGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAACGGAGATGAAGGGCATTaGGGAGGGCATTGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GIAEGIGPPHPLQLTQDNGDEGH*GGHWTS Trigger: GGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTCC...GTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | GATACAGGAGCCAGAGGAAAGGACAGCGAAGCTGGAAGCATCTCCACAGTCCTGATTCCCCTCCAGAAGTaGGGGTTGATGGGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTGARGKDSEAGSISTVLIPLQK*GLMGLS Trigger: GCTCAGGCCCATCAACCCCCACTTCTGGAGGGGAAT...CAGGACTGTGGAGATGCTTCCAGCTTCGCTGTCCTTTCCTCTGGCTCCTGTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | GGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAACATTGCGGAGGGCATTaGACCTCCCCACCCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: GHCGGHWTSPPTTVNSRQHCGGH*TSPPTT Trigger: TGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATG...TTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTGAGTCTCTTAAAGACGCTTTTCCGACTGTCCGGTGCAGAGAGGGCCGGACAACACAGGAGATaGAGGGCATTGCGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPVSLLKTLFRLSGAERAGQHRR*RALRRA Trigger: TGCCCTCCGCAATGCCCTTCATCTCCTGTGTTGTCC...GGCCCTCTCTGCACCGGACAGTCGGAAAAGCGTCTTTAAGAGACTCACTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | AAAACCAGTGAGTCTCTTAAAGACGCTTTTCCGACTGTCCGGTGCAGAGAGGGCGGTCTGGGAGGGTGGTaGTGGGTGTCTGCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTSESLKDAFPTVRCREGGLGGW*WVSASV Trigger: AACACTGGCAGACACCCAGCACCACCCTCCCAGACC...GCCCTCTCTGCACCGGACAGTCGGAAAAGCGTCTTTAAGAGACTCACTGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | GTCACCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGGCGGGTCTGGGAGGGTaGTGCTGGGTGTCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTTHLYFRLHKTQLGWEVAGLGG*CWVSAS Trigger: ACTGGCAGACACCCAGCACCACCCTCCCAGACCCGC...CACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR TCA 90 bp | GGGTGTCTTTTGGGGTCCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTCATAATTTTGACCTGTaGTTTGTTGTCCGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCLLGSSEAEGIQGDPVSHNFDL*FVVRQL Trigger: AAGCTGCCGGACAACAAATCACAGGTCAAAATTATG...AGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGGACCCCAAAAGACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCACCCACTACAGTTAACTCAAGACAACATACCATGCTACAAAGTCACCAAGCAGCAGGGGACTTaGCTGGGAGCAGTCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PPHPLQLTQDNIPCYKVTKQQGT*LGAVGT Trigger: AGTGCCGACTGCTCCCAGGCAAGTCCCCTGCTGCTT...GGTGACTTTGTAGCATGGTATGTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | AAACCAGTGAGTCTCTTAAAGACGCTTTTCCGACTGTCCGGTGCAGAGAGGGCCGCTAACCCACAGATCTaGAGCCAGCTCAGGAACATT | + |
|
Preference number: 4 (lower is better) Translates to: KPVSLLKTLFRLSGAERAANPQI*SQLRNI Trigger: AATGTTCCTGAGCTGGCTGCAGATCTGTGGGTTAGC...GGCCCTCTCTGCACCGGACAGTCGGAAAAGCGTCTTTAAGAGACTCACTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGTAAAACCAGTGAGTCTCTTAAAGACGCTTTTCCGACTGTCCGGTGCAGAGATGGGCCTGAGCTGTaGGTGCCAAGCCAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSKTSESLKDAFPTVRCRDGPEL*VPSQRR Trigger: CCTTCTCTGGCTTGGCACCCACAGCTCAGGCCCATC...TCTGCACCGGACAGTCGGAAAAGCGTCTTTAAGAGACTCACTGGTTTTACTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGTAAAACCAGTGAGTCTCTTAAAGACGCTTTTCCGACTGTCCGGTGCAGAGGTAGATGCGGAAATTaGCCTCAGCCGCGCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKTSESLKDAFPTVRCRGRCGN*PQPRHA Trigger: TGCATGGCGCGGCTGAGGCCAATTTCCGCATCTACC...TCTGCACCGGACAGTCGGAAAAGCGTCTTTAAGAGACTCACTGGTTTTACTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | CCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTGCCTACATAGGGACTTCCTaGGAATGGAGGCCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRIFIFGYIKHSWAGKCAYIGTS*EWRPSG Trigger: CCCAGAGGGCCTCCATTCCCAGGAAGTCCCTATGTA...GGCACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | TCACCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTGCATCCAGGGGTAGATaGGGAAATTGGCCTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPRIFIFGYIKHSWAGKCASRGR*GNWPQP Trigger: CGGCTGAGGCCAATTTCCGCATCTACCCCTGGATGC...ACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | AACTCAAGACAACATACCATGCTACAAAGTCACCCCATTAACACATCCTTTCCACTGGGAGGGTGGTGCTaGGTGTCTGCCAGTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSRQHTMLQSHPINTSFPLGGWC*VSASVG Trigger: CCCAACACTGGCAGACACCCAGCACCACCCTCCCAG...TGGAAAGGATGTGTTAATGGGGTGACTTTGTAGCATGGTATGTTGTCTTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | GAGATGAAGGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAACATACCATaGTACAAAGTCACCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EMKGIAEGIGPPHPLQLTQDNIP*YKVTPL Trigger: TAATGGGGTGACTTTGTAGCATGGTATGTTGTCTTG...AGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | AACTCAAGACAACATACCATGCTACAAAGTCACCCCATTAACACATCCTTTCCAGTTGGGGGTGTCTTTTaGGGTCCTCGGAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSRQHTMLQSHPINTSFPVGGVF*GPRRQR Trigger: CCTCTGCCTCCGAGGACCCCAAAAGACACCCCCAAC...TGGAAAGGATGTGTTAATGGGGTGACTTTGTAGCATGGTATGTTGTCTTGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | CGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTGCCTTCAAAGGACAGCGAAGCTaGAAGCATCTCCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIFIFGYIKHSWAGKCAFKGQRS*KHLHSP Trigger: AGGACTGTGGAGATGCTTCCAGCTTCGCTGTCCTTT...GAAGGCACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CCA 90 bp | TCACCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTCGCTTCTCTGTGAGTTaGGAGCAAAGGAGCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPRIFIFGYIKHSWAGKCRFSVS*EQRSKK Trigger: CTTCTTGCTCCTTTGCTCCCAACTCACAGAGAAGCG...ACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | TCACCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTGGATTGATTCTAGGGTaGAAGCACTTAGGATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPRIFIFGYIKHSWAGKCGLILG*KHLGCF Trigger: AAAGCATCCTAAGTGCTTGCACCCTAGAATCAATCC...ACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR GCA 90 bp | GTCACCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTCCAAGTCAAGACACTaGCTTACAAATGAACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTTHLYFRLHKTQLGWEVSKSRH*LTNELQ Trigger: TTGGAGTTCATTTGTAAGGCAGTGTCTTGACTTGGA...CACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS GCA 90 bp | CGCGGCAGCAGTGGCGGCGGCAGAGGGCACGGCGCCCTCGGGAGCTaGGGCGGCAGTCGGACCTTCGTCCTTATGCTCTTTCTTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RGSSGGGRGHGALGS*GGSRTFVLMLFLPL Trigger: AAGTGGAAGAAAGAGCATAAGGACGAAGGTCCGACTGCCGCCGCAGCTCCCGAGGGCGCCGTGCCCTCTGCCGCCGCCACTGCTGCCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242159.5 ENST00000523796.2 |
||
| CDS GCA 90 bp | GCGCGCCCTCGTCCGTCTTGTCGCAGGCGCCTTTGGCGAGGTCACTaGAGAGCCCGGGGATGTTTTGGTCGTAGGAGGCGCAGGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ARPRPSCRRRLWRGH*RARGCFGRRRRRAG Trigger: ACCTGCCCTGCGCCTCCTACGACCAAAACATCCCCGGGCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGACAAGACGGACGAGGGCGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS TCA 90 bp | GGTCGAGGCGAAGGCGCCGGCGCCCGCCCCGTAGCCGCTTCTCTGTaGGTTGGGAGCAAAGGAGCAAGAAGTCGGCTCGGCATTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRGEGAGARPVAASL*VGSKGARSRLGILE Trigger: TTCCAAAATGCCGAGCCGACTTCTTGCTCCTTTGCTCCCAACTCACAGAGAAGCGGCTACGGGGCGGGCGCCGGCGCCTTCGCCTCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS TCA 90 bp | CCAGGCCGTAGCCGGACGCAAAGGGGCTCTGATAAAGGGGGCTGTTaGCATTGTATAAGCCCGGAACGGTCGAGGCGAAGGCGCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRSRTQRGSDKGGC*HCISPERSRRRRRR Trigger: GCGCCGGCGCCTTCGCCTCGACCGTTCCGGGCTTATACAATGTCAACAGCCCCCTTTATCAGAGCCCCTTTGCGTCCGGCTACGGCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS CCA 90 bp | AGGCGAAGGCGCCGGCGCCCGCCCCGTAGCCGCTTCTCTGTGAGTTaGGAGCAAAGGAGCAAGAAGTCGGCTCGGCATTTTGGAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRRRRRPPRSRFSVS*EQRSKKSARHFGTE Trigger: CTCTGTTCCAAAATGCCGAGCCGACTTCTTGCTCCTTTGCTCCCAACTCACAGAGAAGCGGCTACGGGGCGGGCGCCGGCGCCTTCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CAA 90 bp | CCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGCGGCCGCTCAGTCCAAGGGGGCTGTTGACATaGTATAAGCCCGGAACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRRQRESKATQSLRPLSPRGLLT*YKPGTV Trigger: GACCGTTCCGGGCTTATACAATGTCAACAGCCCCCT...TGGACTGAGCGGCCGCAGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CAA 90 bp | CCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGCGGCCGCTCAGTCCAGTGAGATTCACTTTCTaGCGGGTCTGGGAGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRRQRESKATQSLRPLSPVRFTF*RVWEGG Trigger: ACCACCCTCCCAGACCCGCAAGAAAGTGAATCTCAC...TGGACTGAGCGGCCGCAGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CAA 90 bp | TCTTTTGGGGTCCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGCGGCGTGCTAGGTAGTATTTaGGACGCGCCAGAGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFGVLGGRGNPRRPSLCGVLGSI*DAPEQG Trigger: GCCCTGCTCTGGCGCGTCCAAAATACTACCTAGCAC...GCCGCAGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGGACCCCAAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS GCA 90 bp | GCCGGACTTAGACTCGGATCCAGACGGGGAAGGCGCAGCATCTCTTaGAGCTGCAGAGAGATTGCCACCGCAAACTGGAGCCATGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLRLGSRRGRRSIS*SCREIATANWSHVV Trigger: AACCACATGGCTCCAGTTTGCGGTGGCAATCTCTCTGCAGCTGCAAGAGATGCTGCGCCTTCCCCGTCTGGATCCGAGTCTAAGTCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519842.1 |
||
| CDS-3UTR CAA 90 bp | GGGTGTCTTTTGGGGTCCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTAAACCCCATTTTCTTTaGGACGGAGCTCGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCLLGSSEAEGIQGDPVSKPHFL*DGARRS Trigger: GCTGCGGCGAGCTCCGTCCAAAAGAAAATGGGGTTT...AGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGGACCCCAAAAGACACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CAA 90 bp | CCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGCGGCCGCTCAGTCCATTGACCTGTGATTTGTaGTCCGGCAGCTTTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRRQRESKATQSLRPLSPLTCDL*SGSFQC Trigger: ACACTGAAAGCTGCCGGACAACAAATCACAGGTCAA...TGGACTGAGCGGCCGCAGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CAA 90 bp | TCTTTTGGGGTCCTCGGAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGCGGCCCAGAGAAGGAGGGATaGATTCTAGGGTGCAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SFGVLGGRGNPRRPSLCGPEKEG*ILGCKH Trigger: GTGCTTGCACCCTAGAATCAATCCCTCCTTCTCTGG...GCCGCAGAGACTGGGTCGCCTTGGATTCCCTCTGCCTCCGAGGACCCCAAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CAA 90 bp | GGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAAGCATTGCGGAGGGCATaGGACCTCCCCACCCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: GHCGGHWTSPPTTVNSRQALRRA*DLPTHY Trigger: GTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGC...TTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CAA 90 bp | GAGATGAAGGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTGGATACATAGGTAGTTaGGGGGTGCCTCGAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EMKGIAEGIGPPHPLQLTGYIGS*GVPRAE Trigger: CTCTGCTCGAGGCACCCCCAAACTACCTATGTATCC...AGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS GCA 90 bp | ATCCAGACGGGGAAGGCGCAGCATCTCTTGCAGCTGCAGAGAGATTaGCACCGCAAACTGGAGCCATGTGGTTCGAATAAAGTCAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: IQTGKAQHLLQLQRD*HRKLEPCGSNKVNV Trigger: GACGTTGACTTTATTCGAACCACATGGCTCCAGTTTGCGGTGGCAATCTCTCTGCAGCTGCAAGAGATGCTGCGCCTTCCCCGTCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519842.1 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGAAGGAGGGATTGATTCTAGGGTGCAAGCACTTAGGATGCTTTTTGGAGGTTGGGGGTGTCTTTaGGGGTCCTCGGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AREGGIDSRVQALRMLFGGWGCL*GSSEAE Trigger: CTCTGCCTCCGAGGACCCCAAAAGACACCCCCAACC...TCCAAAAAGCATCCTAAGTGCTTGCACCCTAGAATCAATCCCTCCTTCTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000242159.5 |
||
| CDS-3UTR CAA 90 bp | AAACCAGTGAGTCTCTTAAAGACGCTTTTCCGACTGTCCGGTGCAGAGAGGGCCGGGTGTCTGCCAGTGTaGGGATACATAGGGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: KPVSLLKTLFRLSGAERAGCLPV*GYIGTS Trigger: GGAAGTCCCTATGTATCCCAACACTGGCAGACACCC...GGCCCTCTCTGCACCGGACAGTCGGAAAAGCGTCTTTAAGAGACTCACTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CAA 90 bp | GCCAGAGAAGGAGGGATTGATTCTAGGGTGCAAGCACTTAGGATGCTTTTTGGACTCCAGAAGTGGGGGTaGATGGGCCTGAGCTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: AREGGIDSRVQALRMLFGLQKWG*MGLSCG Trigger: CCCACAGCTCAGGCCCATCAACCCCCACTTCTGGAG...TCCAAAAAGCATCCTAAGTGCTTGCACCCTAGAATCAATCCCTCCTTCTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS CCA 90 bp | AGGCGCAGCATCTCTTGCAGCTGCAGAGAGATTGCCACCGCAAACTaGAGCCATGTGGTTCGAATAAAGTCAACGTCTCCCAGCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RRSISCSCREIATAN*SHVVRIKSTSPSFL Trigger: AAGGAAGCTGGGAGACGTTGACTTTATTCGAACCACATGGCTCCAGTTTGCGGTGGCAATCTCTCTGCAGCTGCAAGAGATGCTGCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519842.1 |
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| CDS-3UTR CAA 90 bp | CACAGTCCTGCTAAGCAGAAGCTAACCCACAGATCTGCAGCCAGCTCAGGAACAGCCCCCGCCGTATATTaGCTAAAAAGCGCGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: HSPAKQKLTHRSAASSGTAPAVY*LKSAFT Trigger: TGTGAACGCGCTTTTTAGCAAATATACGGCGGGGGC...TGTTCCTGAGCTGGCTGCAGATCTGTGGGTTAGCTTCTGCTTAGCAGGACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CAA 90 bp | TCACCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTGAGCCCGGGGATGTTTaGGTCGTAGGAGGCGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SPRIFIFGYIKHSWAGKCEPGDV*VVGGAG Trigger: CCCTGCGCCTCCTACGACCAAAACATCCCCGGGCTC...ACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CAA 90 bp | CGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGTGCCTTCTTGTCGCAGGCGCCTTaGGCGAGGTCACTGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: RIFIFGYIKHSWAGKCAFLSQAP*ARSLQS Trigger: GCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGACAA...GAAGGCACACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CAA 90 bp | AACTCAAGACAACATACCATGCTACAAAGTCACCCCATTAACACATCCTTTCCAGCGCCCTCGTCCGTCTaGTCGCAGGCGCCTTTGGCG | + |
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Preference number: 5 (lower is better) Translates to: NSRQHTMLQSHPINTSFPAPSSV*SQAPLA Trigger: CGCCAAAGGCGCCTGCGACAAGACGGACGAGGGCGC...TGGAAAGGATGTGTTAATGGGGTGACTTTGTAGCATGGTATGTTGTCTTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CAA 90 bp | GGGCATTGCGGAGGGCATTGGACCTCCCCACCCACTACAGTTAACTCAAGACAACTCAGTCCACAAAAGTaGGGAGCTGGAGTAGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: GHCGGHWTSPPTTVNSRQLSPQK*GAGVGD Trigger: ATCACCTACTCCAGCTCCCAACTTTTGTGGACTGAG...TTGTCTTGAGTTAACTGTAGTGGGTGGGGAGGTCCAATGCCCTCCGCAATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CAA 90 bp | AGGGTACAGGACAACACAGGAGATGAAGGGCATTGCGGAGGGCATTGGACCTCCATTTTGACCTGTGATTaGTTGTCCGGCAGCTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: RVQDNTGDEGHCGGHWTSILTCD*LSGSFQ Trigger: CTGAAAGCTGCCGGACAACAAATCACAGGTCAAAAT...GGAGGTCCAATGCCCTCCGCAATGCCCTTCATCTCCTGTGTTGTCCTGTACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CAA 90 bp | GTCACCACGCATCTTTATTTTCGGTTACATAAAACACAGCTGGGCTGGGAAGTGAGTCGGCTCGGCATTTaGGAACAGAGAAGCCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: VTTHLYFRLHKTQLGWEVSRLGI*EQRSPR Trigger: GCGGGGGCTTCTCTGTTCCAAAATGCCGAGCCGACT...CACTTCCCAGCCCAGCTGTGTTTTATGTAACCGAAAATAAAGATGCGTGGTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS-3UTR CAA 90 bp | CCTCCCCACCCACTACAGTTAACTCAAGACAACATACCATGCTACAAAGTCACCCCGCTTCTCTGTGAGTaGGGAGCAAAGGAGCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: PPHPLQLTQDNIPCYKVTPLLCE*GAKEQE Trigger: TTCTTGCTCCTTTGCTCCCAACTCACAGAGAAGCGG...GGTGACTTTGTAGCATGGTATGTTGTCTTGAGTTAACTGTAGTGGGTGGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS GCA 72 bp | CGGGGATGTTTTGGTCGTAGGAGGCGCAGGGCAGGTTaGCGTAGGCGTCGGCGCCCAGGCCGTAGCCGGACG | + |
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Preference number: 6 (lower is better) Translates to: RGCFGRRRRRAG*RRRRRPGRSRT Trigger: CGTCCGGCTACGGCCTGGGCGCCGACGCCTACGGCAACCTGCCCTGCGCCTCCTACGACCAAAACATCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS CAA 72 bp | GCCTCAGCCGCGCCATGCAGCGCGCCCTCGTCCGTCTaGTCGCAGGCGCCTTTGGCGAGGTCACTGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASAAPCSAPSSV*SQAPLARSLQS Trigger: GCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGACAAGACGGACGAGGGCGCGCTGCATGGCGCGGCTGAGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS CAA 90 bp | GTCGCAGGCGCCTTTGGCGAGGTCACTGCAGAGCCCGGGGATGTTTaGGTCGTAGGAGGCGCAGGGCAGGTTGCCGTAGGCGTCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: VAGAFGEVTAEPGDV*VVGGAGQVAVGVGA Trigger: GGCGCCGACGCCTACGGCAACCTGCCCTGCGCCTCCTACGACCAAAACATCCCCGGGCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS CAA 90 bp | CGGAAATTGGCCTCAGCCGCGCCATGCAGCGCGCCCTCGTCCGTCTaGTCGCAGGCGCCTTTGGCGAGGTCACTGCAGAGCCCGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: RKLASAAPCSAPSSV*SQAPLARSLQSPGM Trigger: CATCCCCGGGCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGACAAGACGGACGAGGGCGCGCTGCATGGCGCGGCTGAGGCCAATTTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS GCA 72 bp | AGTGGCGGCGGCAGAGGGCACGGCGCCCTCGGGAGCTaGGGCGGCAGTCGGACCTTCGTCCTTATGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SGGGRGHGALGS*GGSRTFVLMLF Trigger: AAAGAGCATAAGGACGAAGGTCCGACTGCCGCCGCAGCTCCCGAGGGCGCCGTGCCCTCTGCCGCCGCCACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242159.5 ENST00000523796.2 |
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| CDS CCA 72 bp | GCAGCGCGCCCTCGTCCGTCTTGTCGCAGGCGCCTTTaGCGAGGTCACTGCAGAGCCCGGGGATGTTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: AARPRPSCRRRL*RGHCRARGCFG Trigger: ACCAAAACATCCCCGGGCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGACAAGACGGACGAGGGCGCGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS CAA 72 bp | TGCAGCGCGCCCTCGTCCGTCTTGTCGCAGGCGCCTTaGGCGAGGTCACTGCAGAGCCCGGGGATGTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: CSAPSSVLSQAP*ARSLQSPGMFW Trigger: CCAAAACATCCCCGGGCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGACAAGACGGACGAGGGCGCGCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS GCA 72 bp | CGTCCGTCTTGTCGCAGGCGCCTTTGGCGAGGTCACTaGAGAGCCCGGGGATGTTTTGGTCGTAGGAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RPSCRRRLWRGH*RARGCFGRRRR Trigger: GCGCCTCCTACGACCAAAACATCCCCGGGCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGACAAGACGGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS GCA 72 bp | CACACTGTTTATCCGCCCTTCCAGGCCTCCGACCCCTaGACCATGTTGCACCAGCTGAAGCCCCTGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: HTVYPPFQASDP*TMLHQLKPLPP Trigger: GGGCGGCAGGGGCTTCAGCTGGTGCAACATGGTGCAGGGGTCGGAGGCCTGGAAGGGCGGATAAACAGTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519842.1 |
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| CDS CAA 72 bp | GCCTTTGGCGAGGTCACTGCAGAGCCCGGGGATGTTTaGGTCGTAGGAGGCGCAGGGCAGGTTGCCGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: AFGEVTAEPGDV*VVGGAGQVAVG Trigger: GCCTACGGCAACCTGCCCTGCGCCTCCTACGACCAAAACATCCCCGGGCTCTGCAGTGACCTCGCCAAAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS CCA 72 bp | CGCCGGCGCCCGCCCCGTAGCCGCTTCTCTGTGAGTTaGGAGCAAAGGAGCAAGAAGTCGGCTCGGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: RRRPPRSRFSVS*EQRSKKSARHF Trigger: AAAATGCCGAGCCGACTTCTTGCTCCTTTGCTCCCAACTCACAGAGAAGCGGCTACGGGGCGGGCGCCGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS GCA 72 bp | AGACTCGGATCCAGACGGGGAAGGCGCAGCATCTCTTaGAGCTGCAGAGAGATTGCCACCGCAAACTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RLGSRRGRRSIS*SCREIATANWS Trigger: GCTCCAGTTTGCGGTGGCAATCTCTCTGCAGCTGCAAGAGATGCTGCGCCTTCCCCGTCTGGATCCGAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519842.1 |
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| CDS TCA 72 bp | AGCCGGACGCAAAGGGGCTCTGATAAAGGGGGCTGTTaGCATTGTATAAGCCCGGAACGGTCGAGGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SRTQRGSDKGGC*HCISPERSRRR Trigger: CCTTCGCCTCGACCGTTCCGGGCTTATACAATGTCAACAGCCCCCTTTATCAGAGCCCCTTTGCGTCCGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS GCA 72 bp | GGGAAGGCGCAGCATCTCTTGCAGCTGCAGAGAGATTaGCACCGCAAACTGGAGCCATGTGGTTCGAATAAA | + |
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Preference number: 6 (lower is better) Translates to: GKAQHLLQLQRD*HRKLEPCGSNK Trigger: TTTATTCGAACCACATGGCTCCAGTTTGCGGTGGCAATCTCTCTGCAGCTGCAAGAGATGCTGCGCCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519842.1 |
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| CDS CCA 72 bp | ATCTCTTGCAGCTGCAGAGAGATTGCCACCGCAAACTaGAGCCATGTGGTTCGAATAAAGTCAACGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: ISCSCREIATAN*SHVVRIKSTSP Trigger: GGGAGACGTTGACTTTATTCGAACCACATGGCTCCAGTTTGCGGTGGCAATCTCTCTGCAGCTGCAAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519842.1 |
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| CDS CAA 72 bp | GTTGGGAGCAAAGGAGCAAGAAGTCGGCTCGGCATTTaGGAACAGAGAAGCCCCCGCCGTATATTTGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: VGSKGARSRLGI*EQRSPRRIFAK Trigger: TTTAGCAAATATACGGCGGGGGCTTCTCTGTTCCAAAATGCCGAGCCGACTTCTTGCTCCTTTGCTCCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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| CDS CCA 72 bp | TTGGGAGCAAAGGAGCAAGAAGTCGGCTCGGCATTTTaGAACAGAGAAGCCCCCGCCGTATATTTGCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LGAKEQEVGSAF*NREAPAVYLLK Trigger: TTTTAGCAAATATACGGCGGGGGCTTCTCTGTTCCAAAATGCCGAGCCGACTTCTTGCTCCTTTGCTCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242159.5 |
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