Pregenerated sensors for HOXA6 (Homo sapiens)
Ensembl gene IDs: ENSG00000106006Ensembl transcript IDs: ENST00000222728.3, ENST00000521478.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTGTGTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGAGCTCCGGGCTCCCCTaGAGCTGCGGAAGCCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VCAVRPAPPLVLAVCEVLSSGLP*SCGSPQ Trigger: CTGGGGGCTTCCGCAGCTTCAGGGGAGCCCGGAGCT...CAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCACACAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGTTTTAAAGCCGAAGGAGGTTaGAGCGCTGGCCTGGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VQCAPLHRWYWLCVRFCFKAEGG*SAGLVP Trigger: AGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTT...AAAACAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGTTTTTTTGTAAGAAATAAATaGACAGACGCTTGCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: VQCAPLHRWYWLCVRFCFFVRNK*TDACKA Trigger: AGCTTTGCAAGCGTCTGTGCATTTATTTCTTACAAA...AAAACAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCAC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CCA 90 bp | GCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTCCCTGCCGGCCTCGGCGCCCATaGCTCCCATACACAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: ARARGQSRRRLQRWPGPCRPRRP*LPYTAP Trigger: GGGTGCTGTGTATGGGAGCCATGGGCGCCGAGGCCG...GCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR TCA 90 bp | GTTGGGGAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGGCCCGCCTTTGCCTCTaGGTCCTCCCCGCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VGEQARARGQSRRRLQRWARLCL*VLPAGL Trigger: CAGCCCAGCGGGGAGGACTCAGAGGCAAAGGCGGGC...CCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTCCCCAAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR TCA 90 bp | GTTGGGGAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGAGCTCCGGGCTCCCCTaGAGCTGCGGAAGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VGEQARARGQSRRRLQRWSSGLP*SCGSPQ Trigger: CTGGGGGCTTCCGCAGCTTCAGGGGAGCCCGGAGCT...CCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTCCCCAAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | GTTGGGGAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCCTCTGCTTGCCACTaGCCGAGGGCGAGGCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VGEQARARGQSRRRLQRWPSACH*PRARRH Trigger: GTGGCGCCTCGCCCTCGGGCAGTGGCAAGCAGAGGG...CCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTCCCCAAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTCCCTGCCCAGAGGAGTCCTGGCCGCTaGGAAGGCTCCCGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: GQGGKAEGGCSAGLVPAQRSPGR*EGSRGK Trigger: CTTTCCCCGGGAGCCTTCCCAGCGGCCAGGACTCCT...CTGGGCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CCA 90 bp | GCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTCCCTGCTCGGCGCCTTCGTCATaGAGTGCTTTGCCCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: ARARGQSRRRLQRWPGPCSAPSS*SALPCP Trigger: CGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGA...GCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | GAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTCGTAGGACGCCCGGTTaGAGGCCAGGACCGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: EQARARGQSRRRLQRWPGRRTPG*RPGPSW Trigger: CCAACTCGGTCCTGGCCTGCAACCGGGCGTCCTACG...ACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | GCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTCCCTGCAAAGCCGAAGGAGGTTaGAGCGCTGGCCTGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: ARARGQSRRRLQRWPGPCKAEGG*SAGLVP Trigger: AGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTT...GCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | ATAAATGCACAGACGCTTGCAAAGCTCCGGGCTCCCCTGAAGCTGCGGAAGCCCCGGGGCCCCTCTGCTTaGCACTGCCCGAGGGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: INAQTLAKLRAPLKLRKPRGPSA*HCPRAR Trigger: CCTCGCCCTCGGGCAGTGGCAAGCAGAGGGGCCCCG...GGGCTTCCGCAGCTTCAGGGGAGCCCGGAGCTTTGCAAGCGTCTGTGCATTTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CCA 90 bp | GAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTGCCCCGCTCCACCGCTaGTATTGGCTGTGTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: EQARARGQSRRRLQRWPGAPLHR*YWLCVR Trigger: CCTCACACACAGCCAATACCAGCGGTGGAGCGGGGC...ACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | GCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTCCCTGCCTGTCGGGTTTGTACTaGTGCTCGGGAGAAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: ARARGQSRRRLQRWPGPCLSGLY*CSGEKC Trigger: GCACTTTTCTCCCGAGCAGCAGTACAAACCCGACAG...GCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | ATAAATGCACAGACGCTTGCAAAGCTCCGGGCTCCCCTGAAGCTGCGGAAGCCCCGCTGGCCTGGTCCCTaGCCAGGCATCTACTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: INAQTLAKLRAPLKLRKPRWPGP*PGIYSP Trigger: GGGCGAGTAGATGCCTGGGCAGGGACCAGGCCAGCG...GGGCTTCCGCAGCTTCAGGGGAGCCCGGAGCTTTGCAAGCGTCTGTGCATTTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGCCCAAGAAGGAGTCCTaGCCGCTGGGAAGGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VCAVRPAPPLVLAVCEVLPKKES*PLGRLP Trigger: CGGGAGCCTTCCCAGCGGCCAGGACTCCTTCTTGGG...CAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCACACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR TCA 90 bp | GTTGGGGAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGAGGGCGAGGCGCCACTaGGGTCCTTATCAGAATAGA | + |
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Preference number: 4 (lower is better) Translates to: VGEQARARGQSRRRLQRWRARRH*GPYQNR Trigger: TCTATTCTGATAAGGACCTCAGTGGCGCCTCGCCCT...CCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTCCCCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | GGGTGTGTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTGCCTTCGTCATGGAGTaGTTTGCCCTGCCCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GCVQCAPLHRWYWLCVRFAFVME*FALPAA Trigger: AGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGC...AAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCACACACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | AGTTGGGGAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGTCCTCCCCGCTGGGCTaGGTGGAATTGATGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SWGTGEGKGAKPKEVAALSSPLG*VELMSL Trigger: CAAGCTCATCAATTCCACGCAGCCCAGCGGGGAGGA...CAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTCCCCAACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CCA 90 bp | GGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTCCCTGCCCAGCTCCACCGCTGGTATTaGCTGTGTGTGAGGTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: GQGGKAEGGCSAGLVPAQLHRWY*LCVRFC Trigger: ACAAAACCTCACACACAGCCAATACCAGCGGTGGAG...CTGGGCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | GGGTGTGTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTCTTTGCCCTGCCCGCTaGTGCTGTCGGGTTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: GCVQCAPLHRWYWLCVRFLCPAR*CCRVCT Trigger: AGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAG...AAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCACACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | GTGTGTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGCGTCATGGAGTGCTTTaGCCTGCCCGCTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VCAVRPAPPLVLAVCEVLRHGVL*PARCCC Trigger: ACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACG...CAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | GTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGTTTTTGCCCTGCCCGCTGCTaGTGTCGGGTTTGTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: VQCAPLHRWYWLCVRFCFCPARC*CRVCTA Trigger: AGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCA...AAAACAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | ATAAATGCACAGACGCTTGCAAAGCTCCGGGCTCCCCTGAAGCTGCGGAAGCCCAAATGCACAGACGCTTaGAAAGCTCCGGGCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: INAQTLAKLRAPLKLRKPKCTDA*KAPGSP Trigger: AGGGGAGCCCGGAGCTTTGCAAGCGTCTGTGCATTT...GGGCTTCCGCAGCTTCAGGGGAGCCCGGAGCTTTGCAAGCGTCTGTGCATTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | ATAAATGCACAGACGCTTGCAAAGCTCCGGGCTCCCCTGAAGCTGCGGAAGCCCTCGGGTTTGTACTGCTaGTCGGGAGAAAAGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: INAQTLAKLRAPLKLRKPSGLYC*SGEKCR Trigger: CCTGCACTTTTCTCCCGAGCAGCAGTACAAACCCGA...GGGCTTCCGCAGCTTCAGGGGAGCCCGGAGCTTTGCAAGCGTCTGTGCATTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR TCA 90 bp | ATAAATGCACAGACGCTTGCAAAGCTCCGGGCTCCCCTGAAGCTGCGGAAGCCCTTGGTAGAAACAAGGTaGGGTGTACGTCTTGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: INAQTLAKLRAPLKLRKPLVETR*GVRLVR Trigger: CCGGACAAGACGTACACCTCACCTTGTTTCTACCAA...GGGCTTCCGCAGCTTCAGGGGAGCCCGGAGCTTTGCAAGCGTCTGTGCATTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CCA 90 bp | ATAAATGCACAGACGCTTGCAAAGCTCCGGGCTCCCCTGAAGCTGCGGAAGCCCAGGCCAGGACCGAGTTaGACTGTTGGTAGAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: INAQTLAKLRAPLKLRKPRPGPS*TVGRNK Trigger: CTTGTTTCTACCAACAGTCCAACTCGGTCCTGGCCT...GGGCTTCCGCAGCTTCAGGGGAGCCCGGAGCTTTGCAAGCGTCTGTGCATTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CCA 90 bp | GTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGTTTTGGCTCCCGGGGAAAGTaGGATTCACAAAATAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VQCAPLHRWYWLCVRFCFGSRGK*DSQNRN Trigger: GTTCCTATTTTGTGAATCCCACTTTCCCCGGGAGCC...AAAACAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR GCA 90 bp | GAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTTTTGTAAGAAATAAATaGACAGACGCTTGCAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: EQARARGQSRRRLQRWPGFVRNK*TDACKA Trigger: AGCTTTGCAAGCGTCTGTGCATTTATTTCTTACAAA...ACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 90 bp | GGCAGGACGGCGAGCTGGGCCCCACTGTCTGCCCTTGCCCTGGGCTaGCCATTGAACAGCTCCACCTCTGCCAGCCTGGAGGGTGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: GRTASWAPLSALALG*PLNSSTSASLEGGL Trigger: CAGACCACCCTCCAGGCTGGCAGAGGTGGAGCTGTTCAATGGGCAGCCCAGGGCAAGGGCAGACAGTGGGGCCCAGCTCGCCGTCCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521478.1 |
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| CDS-3UTR CAA 90 bp | GTGTGTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGCCGGGGCCCCTCTGCTaGCCACTGCCCGAGGGCGAG | + |
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Preference number: 5 (lower is better) Translates to: VCAVRPAPPLVLAVCEVLPGPLC*PLPEGE Trigger: CTCGCCCTCGGGCAGTGGCAAGCAGAGGGGCCCCGG...CAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCACACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS TCA 90 bp | CGGCGAGCTGGGCCCCACTGTCTGCCCTTGCCCTGGGCTGCCCATTaGACAGCTCCACCTCTGCCAGCCTGGAGGGTGGTCTGGGAGTAT | + |
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Preference number: 5 (lower is better) Translates to: RRAGPHCLPLPWAAH*TAPPLPAWRVVWEY Trigger: ATACTCCCAGACCACCCTCCAGGCTGGCAGAGGTGGAGCTGTTCAATGGGCAGCCCAGGGCAAGGGCAGACAGTGGGGCCCAGCTCGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521478.1 |
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| CDS GCA 90 bp | AAGTTGGGGAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTaGAGCGCTGGCCTGGTCCCTGCCCAGGCATCTACTCGCCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: KLGNRRGQGGKAEGG*SAGLVPAQASTRPP Trigger: AGGCGGGCGAGTAGATGCCTGGGCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTCCCCAACTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS CCA 90 bp | GAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTaGCCTGGTCCCTGCCCAGGCATCTACTCGCCCGCCTTTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: EQARARGQSRRRLQR*PGPCPGIYSPAFAS Trigger: AGAGGCAAAGGCGGGCGAGTAGATGCCTGGGCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 90 bp | CCGGGCTCGTGTACTTCCGGTCGGCGCCTTCGTCATGGAGTGCTTTaGCCTGCCCGCTGCTGCTGTCGGGTTTGTACTGCTGCTCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PGSCTSGRRLRHGVL*PARCCCRVCTAARE Trigger: CTCCCGAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAAGTACACGAGCCCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS-3UTR CAA 90 bp | GTTGGGGAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGTCGTCATGGAGTGCTTaGCCCTGCCCGCTGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: VGEQARARGQSRRRLQRWSSWSA*PCPLLL Trigger: CAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGA...CCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTCCCCAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CAA 90 bp | GTTGGGGAACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCTGCTGCTGTCGGGTTaGTACTGCTGCTCGGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: VGEQARARGQSRRRLQRWLLLSG*YCCSGE Trigger: TTCTCCCGAGCAGCAGTACAAACCCGACAGCAGCAG...CCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTTCCCCAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS TCA 90 bp | CTGGCCTGGTCCCTGCCCAGGCATCTACTCGCCCGCCTTTGCCTCTaGGTCCTCCCCGCTGGGCTGCGTGGAATTGATGAGCTTGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LAWSLPRHLLARLCL*VLPAGLRGIDELVF Trigger: GAAAACAAGCTCATCAATTCCACGCAGCCCAGCGGGGAGGACTCAGAGGCAAAGGCGGGCGAGTAGATGCCTGGGCAGGGACCAGGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 90 bp | GTAAACCGGGCTCGTGTACTTCCGGTCGGCGCCTTCGTCATGGAGTaGTTTGCCCTGCCCGCTGCTGCTGTCGGGTTTGTACTGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: VNRARVLPVGAFVME*FALPAAAVGFVLLL Trigger: GAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAAGTACACGAGCCCGGTTTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS TCA 90 bp | CCGGTTGCAGGCCAGGACCGAGTTGGACTGTTGGTAGAAACAAGGTaGGGTGTACGTCTTGTCCGGGAGACTCGACGCCCCGTACGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PVAGQDRVGLLVETR*GVRLVRETRRPVRG Trigger: GCCTCGTACGGGGCGTCGAGTCTCCCGGACAAGACGTACACCTCACCTTGTTTCTACCAACAGTCCAACTCGGTCCTGGCCTGCAACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 90 bp | TCCGGTCGGCGCCTTCGTCATGGAGTGCTTTGCCCTGCCCGCTGCTaGTGTCGGGTTTGTACTGCTGCTCGGGAGAAAAGTGCAGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SGRRLRHGVLCPARC*CRVCTAAREKSAGS Trigger: ACTACCTGCACTTTTCTCCCGAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS GCA 90 bp | ACTTCCGGTCGGCGCCTTCGTCATGGAGTGCTTTGCCCTGCCCGCTaGTGCTGTCGGGTTTGTACTGCTGCTCGGGAGAAAAGTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: TSGRRLRHGVLCPAR*CCRVCTAAREKSAG Trigger: ACCTGCACTTTTCTCCCGAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS GCA 90 bp | CTCGTGTACTTCCGGTCGGCGCCTTCGTCATGGAGTGCTTTGCCCTaGCCGCTGCTGCTGTCGGGTTTGTACTGCTGCTCGGGAGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: LVYFRSAPSSWSALP*PLLLSGLYCCSGEK Trigger: CTTTTCTCCCGAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAAGTACACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS-3UTR CAA 90 bp | ATAAATGCACAGACGCTTGCAAAGCTCCGGGCTCCCCTGAAGCTGCGGAAGCCCGGTGAGGTGTACGTCTaGTCCGGGAGACTCGACGCC | + |
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Preference number: 5 (lower is better) Translates to: INAQTLAKLRAPLKLRKPGEVYV*SGRLDA Trigger: GGCGTCGAGTCTCCCGGACAAGACGTACACCTCACC...GGGCTTCCGCAGCTTCAGGGGAGCCCGGAGCTTTGCAAGCGTCTGTGCATTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CAA 90 bp | GGGCAAGGGGGCAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTCCCTGCCCAGCTGGGCTGCGTGGAATaGATGAGCTTGTTTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: GQGGKAEGGCSAGLVPAQLGCVE*MSLFSF Trigger: AAAGGAAAACAAGCTCATCAATTCCACGCAGCCCAG...CTGGGCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CAA 90 bp | GTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGTTTTTCTACTCGCCCGCCTTaGCCTCTGAGTCCTCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: VQCAPLHRWYWLCVRFCFSTRPP*PLSPPR Trigger: GCGGGGAGGACTCAGAGGCAAAGGCGGGCGAGTAGA...AAAACAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS CCA 90 bp | AGGCCCCGTACTCGTAGGACGCCCGGTTGCAGGCCAGGACCGAGTTaGACTGTTGGTAGAAACAAGGTGAGGTGTACGTCTTGTCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: RPRTRRTPGCRPGPS*TVGRNKVRCTSCPG Trigger: TCCCGGACAAGACGTACACCTCACCTTGTTTCTACCAACAGTCCAACTCGGTCCTGGCCTGCAACCGGGCGTCCTACGAGTACGGGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS-3UTR CAA 90 bp | GTGTGTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGAAAATAGGAACTCATTaGCGCGCCCCTCTGCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VCAVRPAPPLVLAVCEVLKIGTH*RAPLQD Trigger: GTCCTGCAGAGGGGCGCGCAAATGAGTTCCTATTTT...CAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 90 bp | TATCAGAATAGAAACACGAGGCCCCGTACTCGTAGGACGCCCGGTTaGAGGCCAGGACCGAGTTGGACTTTCAGTTTCTCTCCAAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: YQNRNTRPRTRRTPG*RPGPSWTFSFSPRG Trigger: CCCCCTTGGAGAGAAACTGAAAGTCCAACTCGGTCCTGGCCTGCAACCGGGCGTCCTACGAGTACGGGGCCTCGTGTTTCTATTCTGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521478.1 |
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| CDS-3UTR CAA 90 bp | GTGCAGTGCGCCCCGCTCCACCGCTGGTATTGGCTGTGTGTGAGGTTTTGTTTTGCTCCACCGCTGGTATaGGCTGTGTGTGAGGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: VQCAPLHRWYWLCVRFCFAPPLV*AVCEVL Trigger: CAAAACCTCACACACAGCCAATACCAGCGGTGGAGC...AAAACAAAACCTCACACACAGCCAATACCAGCGGTGGAGCGGGGCGCACTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 90 bp | TATCAGAATAGAAACACGAGGCCCCGTACTCGTAGGACGCCCGGTTaGAGGCCAGGACCGAGTTGGACTGTTGGTAGAAACAAGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: YQNRNTRPRTRRTPG*RPGPSWTVGRNKVR Trigger: CCTCACCTTGTTTCTACCAACAGTCCAACTCGGTCCTGGCCTGCAACCGGGCGTCCTACGAGTACGGGGCCTCGTGTTTCTATTCTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS CCA 72 bp | ACCGGGCTCGTGTACTTCCGGTCGGCGCCTTCGTCATaGAGTGCTTTGCCCTGCCCGCTGCTGCTGTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: TGLVYFRSAPSS*SALPCPLLLSG Trigger: ACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAAGTACACGAGCCCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS GCA 72 bp | CAAAGCCGAAGGAGGTTGCAGCGCTGGCCTGGTCCCTaGCCAGGCATCTACTCGCCCGCCTTTGCCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: QSRRRLQRWPGP*PGIYSPAFASE Trigger: CTCAGAGGCAAAGGCGGGCGAGTAGATGCCTGGGCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 72 bp | AACAGGCGAGGGCAAGGGGGCAAAGCCGAAGGAGGTTaGAGCGCTGGCCTGGTCCCTGCCCAGGCATCTACT | + |
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Preference number: 6 (lower is better) Translates to: NRRGQGGKAEGG*SAGLVPAQAST Trigger: AGTAGATGCCTGGGCAGGGACCAGGCCAGCGCTGCAACCTCCTTCGGCTTTGCCCCCTTGCCCTCGCCTGTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 72 bp | CCCAGACCAGAGCCCAAAGCACACAGGTGCGGCCTCTaGCCTTCACAGCCCTCTCCTGGAGCCAAAGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: PRPEPKAHRCGL*PSQPSPGAKAV Trigger: GACGGCTTTGGCTCCAGGAGAGGGCTGTGAAGGGCAGAGGCCGCACCTGTGTGCTTTGGGCTCTGGTCTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521478.1 |
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| CDS CAA 90 bp | ACCGGGCTCGTGTACTTCCGGTCGGCGCCTTCGTCATGGAGTGCTTaGCCCTGCCCGCTGCTGCTGTCGGGTTTGTACTGCTGCTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: TGLVYFRSAPSSWSA*PCPLLLSGLYCCSG Trigger: TCCCGAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAAGTACACGAGCCCGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS TCA 72 bp | TCCCTGCCCAGGCATCTACTCGCCCGCCTTTGCCTCTaGGTCCTCCCCGCTGGGCTGCGTGGAATTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: SLPRHLLARLCL*VLPAGLRGIDE Trigger: CTCATCAATTCCACGCAGCCCAGCGGGGAGGACTCAGAGGCAAAGGCGGGCGAGTAGATGCCTGGGCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 72 bp | TTCCGGTCGGCGCCTTCGTCATGGAGTGCTTTGCCCTaGCCGCTGCTGCTGTCGGGTTTGTACTGCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: FRSAPSSWSALP*PLLLSGLYCCS Trigger: CGAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS TCA 72 bp | TGGAGGGTGGTCTGGGAGTATGTAGGTGTGGGACCTTaGAGGCCACCTCGGTCCAGCCAGCTCGCTAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: WRVVWEYVGVGP*RPPRSSQLASP Trigger: TGGGCTAGCGAGCTGGCTGGACCGAGGTGGCCTTCAAGGTCCCACACCTACATACTCCCAGACCACCCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521478.1 |
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| CDS GCA 72 bp | CGGCGCCTTCGTCATGGAGTGCTTTGCCCTGCCCGCTaGTGCTGTCGGGTTTGTACTGCTGCTCGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: RRLRHGVLCPAR*CCRVCTAAREK Trigger: TTTCTCCCGAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS GCA 72 bp | GCTCGTGTACTTCCGGTCGGCGCCTTCGTCATGGAGTaGTTTGCCCTGCCCGCTGCTGCTGTCGGGTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: ARVLPVGAFVME*FALPAAAVGFV Trigger: TACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAAGTACACGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS CAA 72 bp | GTGTACTTCCGGTCGGCGCCTTCGTCATGGAGTGCTTaGCCCTGCCCGCTGCTGCTGTCGGGTTTGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: VYFRSAPSSWSA*PCPLLLSGLYC Trigger: GCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAAGTACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS GCA 72 bp | TGTACTTCCGGTCGGCGCCTTCGTCATGGAGTGCTTTaGCCTGCCCGCTGCTGCTGTCGGGTTTGTACTGCT | + |
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Preference number: 6 (lower is better) Translates to: CTSGRRLRHGVL*PARCCCRVCTA Trigger: AGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCGCCGACCGGAAGTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS TCA 72 bp | GGCCAGGACCGAGTTGGACTGTTGGTAGAAACAAGGTaGGGTGTACGTCTTGTCCGGGAGACTCGACGCCCC | + |
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Preference number: 6 (lower is better) Translates to: GQDRVGLLVETR*GVRLVRETRRP Trigger: GGGGCGTCGAGTCTCCCGGACAAGACGTACACCTCACCTTGTTTCTACCAACAGTCCAACTCGGTCCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 72 bp | AGAAACACGAGGCCCCGTACTCGTAGGACGCCCGGTTaGAGGCCAGGACCGAGTTGGACTGTTGGTAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: RNTRPRTRRTPG*RPGPSWTVGRN Trigger: GTTTCTACCAACAGTCCAACTCGGTCCTGGCCTGCAACCGGGCGTCCTACGAGTACGGGGCCTCGTGTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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| CDS GCA 72 bp | CGCCTTCGTCATGGAGTGCTTTGCCCTGCCCGCTGCTaGTGTCGGGTTTGTACTGCTGCTCGGGAGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: RLRHGVLCPARC*CRVCTAAREKS Trigger: ACTTTTCTCCCGAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAGGGCAAAGCACTCCATGACGAAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222728.3 ENST00000521478.1 |
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| CDS GCA 72 bp | AGAAACACGAGGCCCCGTACTCGTAGGACGCCCGGTTaGAGGCCAGGACCGAGTTGGACTTTCAGTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RNTRPRTRRTPG*RPGPSWTFSFS Trigger: AGAGAAACTGAAAGTCCAACTCGGTCCTGGCCTGCAACCGGGCGTCCTACGAGTACGGGGCCTCGTGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521478.1 |
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| CDS CCA 72 bp | ACTCGTAGGACGCCCGGTTGCAGGCCAGGACCGAGTTaGACTGTTGGTAGAAACAAGGTGAGGTGTACGTCT | + |
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Preference number: 6 (lower is better) Translates to: TRRTPGCRPGPS*TVGRNKVRCTS Trigger: AGACGTACACCTCACCTTGTTTCTACCAACAGTCCAACTCGGTCCTGGCCTGCAACCGGGCGTCCTACGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222728.3 |
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