Pregenerated sensors for HOXA5 (Homo sapiens)
Ensembl gene IDs: ENSG00000106004Ensembl transcript IDs: ENST00000222726.4
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGGGACACACCGCTTaGAGTCACAGTTTTCATCACAGAGTCACTAGTCACTACACGTCG | + |
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Preference number: 1 (lower is better) Translates to: SSCKGSYKGTQGHTA*SHSFHHRVTSHYTS Trigger: CGACGTGTAGTGACTAGTGACTCTGTGATGAAAACTGTGACTCCAAGCGGTGTGTCCCTGCGTGCCTTTATAGGACCCTTTGCACGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR TCA 90 bp | TATACAGGCGCTATAATGGCAATAAACAGGCTCATGATTAAAAGATaGATTAGGGCAACGAGAACAGGGCTTCTTCACAGAAGGAACACA | + |
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Preference number: 1 (lower is better) Translates to: YTGAIMAINRLMIKR*IRATRTGLLHRRNT Trigger: TGTGTTCCTTCTGTGAAGAAGCCCTGTTCTCGTTGCCCTAATTCATCTTTTAATCATGAGCCTGTTTATTGCCATTATAGCGCCTGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR-3UTR TCA 90 bp | TGCGCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGGGCACTAAACGAGATTaGAGGGGGACTTTTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: CAYKSHFQSSCKGSYKGTGTKRD*RGTFCV Trigger: CACACAAAAAGTCCCCCTTCAATCTCGTTTAGTGCC...CGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR-3UTR GCA 90 bp | CACACCGCTTGGAGTCACAGTTTTCATCACAGAGTCACTAGTCACTACACGTCGACACTTCCACGCACATaGACAGTTAAACAACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: HTAWSHSFHHRVTSHYTSTLPRT*TVKQLE Trigger: CTCAAGTTGTTTAACTGTGCATGTGCGTGGAAGTGT...CGACGTGTAGTGACTAGTGACTCTGTGATGAAAACTGTGACTCCAAGCGGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR-3UTR TCA 90 bp | ACTACACGTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATCTCATGATTAAAAGATaGATTAGGGCAACGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: TTRRTSCVSSSHLYNSINLMIKR*IRATRT Trigger: TGTTCTCGTTGCCCTAATTCATCTTTTAATCATGAG...ATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGACGTGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR-3UTR CAA 90 bp | AAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGGGACACTACACGTCGAACAAGTaGTGTCTCATCAAGTCACCT | + |
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Preference number: 3 (lower is better) Translates to: KSHFQSSCKGSYKGTQGHYTSNK*CLIKSP Trigger: AGGTGACTTGATGAGACACAACTTGTTCGACGTGTA...GTGTCCCTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR CCA 72 bp | AAAGGGTCCTATAAAGGCACGCAGGGACACACCGCTTaGAGTCACAGTTTTCATCACAGAGTCACTAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: KGSYKGTQGHTA*SHSFHHRVTSH Trigger: GTGACTAGTGACTCTGTGATGAAAACTGTGACTCCAAGCGGTGTGTCCCTGCGTGCCTTTATAGGACCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR-3UTR CAA 90 bp | CAGGGACACACCGCTTGGAGTCACAGTTTTCATCACAGAGTCACTAGTCACTACAACAGCTTGGAGCTATaGAGACAGGAACACTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: QGHTAWSHSFHHRVTSHYNSLEL*RQEHFH Trigger: GTGGAAGTGTTCCTGTCTCAATAGCTCCAAGCTGTT...GTAGTGACTAGTGACTCTGTGATGAAAACTGTGACTCCAAGCGGTGTGTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR-3UTR CAA 90 bp | GCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGAATATCTTTAACAGCTaGGAGCTATTGAGACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: AYKSHFQSSCKGSYKGTQNIFNS*ELLRQE Trigger: TTCCTGTCTCAATAGCTCCAAGCTGTTAAAGATATT...CTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR GCA 72 bp | CTTGGAGCTATTGAGACAGGAACACTTCCACGCACATaGACAGTTAAACAACTTGAGTGCAACACACAACAT | + |
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Preference number: 3 (lower is better) Translates to: LGAIETGTLPRT*TVKQLECNTQH Trigger: ATGTTGTGTGTTGCACTCAAGTTGTTTAACTGTGCATGTGCGTGGAAGTGTTCCTGTCTCAATAGCTCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR-3UTR CAA 90 bp | GTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATTACACAAGTGCAACACACAACATaGGCACTAAACGAGATTGAA | + |
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Preference number: 3 (lower is better) Translates to: VEQVVSHQVTSTTALITQVQHTT*ALNEIE Trigger: TTCAATCTCGTTTAGTGCCAATGTTGTGTGTTGCAC...TTGTGTAATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR TCA 72 bp | GCTATAATGGCAATAAACAGGCTCATGATTAAAAGATaGATTAGGGCAACGAGAACAGGGCTTCTTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: AIMAINRLMIKR*IRATRTGLLHR Trigger: TCTGTGAAGAAGCCCTGTTCTCGTTGCCCTAATTCATCTTTTAATCATGAGCCTGTTTATTGCCATTATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | AAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGGGACACCGGCTCCGGACGCCGTaGCAACCCCCTCTCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KSHFQSSCKGSYKGTQGHRLRTP*QPPLCC Trigger: GCAGCAGAGAGGGGGTTGGCACGGCGTCCGGAGCCG...GTGTCCCTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CCA 90 bp | CTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGGTCTCCGGAGCCAAAGTaGCCGGAGCCCGAGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LIRATSRVRAKGPIKARRSPEPK*PEPERP Trigger: CGGCCGCTCGGGCTCCGGCCACTTTGGCTCCGGAGA...CCTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CCA 90 bp | GCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGGTGGACGTGGCCGGCTaGCTGTACCTGGGCTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: AYKSHFQSSCKGSYKGTQVDVAG*LYLGSA Trigger: CGCCGAGCCCAGGTACAGCCAGCCGGCCACGTCCAC...CTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | TGCGCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGGGCAGCGGATCGGGCTaGGGAGAGTGCGTGGACGTG | + |
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Preference number: 4 (lower is better) Translates to: CAYKSHFQSSCKGSYKGTGSGSG*GECVDV Trigger: CACGTCCACGCACTCTCCTCAGCCCGATCCGCTGCC...CGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | CAGCTTGGAGCTATTGAGACAGGAACACTTCCACGCACATGCACAGTTAAACAACGCTGGCAGCGTAGCTaGGGGCGCGCTCTCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QLGAIETGTLPRTCTVKQRWQRS*GRALRS Trigger: GCTCCGGAGAGCGCGCCCGCAGCTACGCTGCCAGCG...TTGTTTAACTGTGCATGTGCGTGGAAGTGTTCCTGTCTCAATAGCTCCAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CCA 90 bp | GAATTAGGGCAACGAGAACAGGGCTTCTTCACAGAAGGAACACAAGGGAGTTTCTCGCCTGCTCGCTGCTaGCAGGGGCGTCCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: ELGQREQGFFTEGTQGSFSPARC*QGRPPR Trigger: CCGAGGAGGACGCCCCTGCCAGCAGCGAGCAGGCGA...GAAACTCCCTTGTGTTCCTTCTGTGAAGAAGCCCTGTTCTCGTTGCCCTAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | GCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGAGCCGTAGCCGTACCTaGCGGAGTGCATGCTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: AYKSHFQSSCKGSYKGTQSRSRT*RSACSP Trigger: CGGCGAGCATGCACTCCGGCAGGTACGGCTACGGCT...CTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | CACACCGCTTGGAGTCACAGTTTTCATCACAGAGTCACTAGTCACTACACGTCGCCGTCCGGGCCCTTTTaGCTTCCGGGCCGCCTATGT | + |
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Preference number: 4 (lower is better) Translates to: HTAWSHSFHHRVTSHYTSPSGPF*LPGRLC Trigger: ACATAGGCGGCCCGGAAGGCAAAAGGGCCCGGACGG...CGACGTGTAGTGACTAGTGACTCTGTGATGAAAACTGTGACTCCAAGCGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CCA 90 bp | CACACCGCTTGGAGTCACAGTTTTCATCACAGAGTCACTAGTCACTACACGTCGGCTGAGGAGAGTGCGTaGACGTGGCCGGCTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HTAWSHSFHHRVTSHYTSAEESA*TWPAGC Trigger: ACAGCCAGCCGGCCACGTCCACGCACTCTCCTCAGC...CGACGTGTAGTGACTAGTGACTCTGTGATGAAAACTGTGACTCCAAGCGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CCA 90 bp | TGCGCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGTTTTTCCCGCCGTGGTaGCTGTCGCTGCCGGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: CAYKSHFQSSCKGSYKGTFFPPW*LSLPGE Trigger: CTCGCCCGGCAGCGACAGCCACCACGGCGGGAAAAA...CGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | TGCGCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCCGAGCGGCCGACGCTaGGATCCATGCCATTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: CAYKSHFQSSCKGSYKGTPSGRR*DPCHCS Trigger: GCTACAATGGCATGGATCTCAGCGTCGGCCGCTCGG...CGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CCA 90 bp | ACTGACACTACGCGGGATCCGCTAATACTGCTCAGTACTTTAAACGCTCAGATAGAGTTTTTCCCGCCGTaGTGGCTGTCGCTGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: TDTTRDPLILLSTLNAQIEFFPP*WLSLPG Trigger: GCCCGGCAGCGACAGCCACCACGGCGGGAAAAACTC...TATCTGAGCGTTTAAAGTACTGAGCAGTATTAGCGGATCCCGCGTAGTGTCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CCA 90 bp | TGCGCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCGGCCGAGGCGCCGCTaGAGTTGCTTAGGGAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: CAYKSHFQSSCKGSYKGTRPRRR*SCLGSF Trigger: AAAACTCCCTAAGCAACTCCAGCGGCGCCTCGGCCG...CGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CCA 90 bp | AGTCACCTTAGTACTGACACTACGCGGGATCCGCTAATACTGCTCAGTACTTTATCTCTGCTGCTGATGTaGGTGCTGCCGGCGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SHLSTDTTRDPLILLSTLSLLLM*VLPASA Trigger: GGCCGACGCCGGCAGCACCCACATCAGCAGCAGAGA...TAAAGTACTGAGCAGTATTAGCGGATCCCGCGTAGTGTCAGTACTAAGGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | ACTGACACTACGCGGGATCCGCTAATACTGCTCAGTACTTTAAACGCTCAGATATGCTCGCCGAGTCCCTaGATTGCTCGCTCACGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TDTTRDPLILLSTLNAQICSPSP*IARSRN Trigger: GTTCCGTGAGCGAGCAATTCAGGGACTCGGCGAGCA...TATCTGAGCGTTTAAAGTACTGAGCAGTATTAGCGGATCCCGCGTAGTGTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | CTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGGGCTCGCGGTCGTTTGTaGGTCTATAGCACCCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LIRATSRVRAKGPIKARRARGRL*VYSTLA Trigger: TGCAAGGGTGCTATAGACGCACAAACGACCGCGAGC...CCTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | GAATTAGGGCAACGAGAACAGGGCTTCTTCACAGAAGGAACACAAGGGAGTTTCAGGCGCCGCTGGAGTTaGTTAGGGAGTTTTTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: ELGQREQGFFTEGTQGSFRRRWS*LGSFSR Trigger: GCGGGAAAAACTCCCTAAGCAACTCCAGCGGCGCCT...GAAACTCCCTTGTGTTCCTTCTGTGAAGAAGCCCTGTTCTCGTTGCCCTAATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | GAATTAGGGCAACGAGAACAGGGCTTCTTCACAGAAGGAACACAAGGGAGTTTCCCGCCTATGTTGTCATaGCTTATGTGCAGCTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: ELGQREQGFFTEGTQGSFPPMLS*LMCSLR Trigger: GCGCAAGCTGCACATAAGTCATGACAACATAGGCGG...GAAACTCCCTTGTGTTCCTTCTGTGAAGAAGCCCTGTTCTCGTTGCCCTAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | GTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATTACACAACCGTACCTGCCGGAGTaGATGCTCGCCGAGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VEQVVSHQVTSTTALITQPYLPE*MLAESL Trigger: CAGGGACTCGGCGAGCATGCACTCCGGCAGGTACGG...TTGTGTAATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | CAGCTTGGAGCTATTGAGACAGGAACACTTCCACGCACATGCACAGTTAAACAAGGCACTAAACGAGATTaGAGGGGGACTTTTTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: QLGAIETGTLPRTCTVKQGTKRD*RGTFCV Trigger: CACACAAAAAGTCCCCCTTCAATCTCGTTTAGTGCC...TTGTTTAACTGTGCATGTGCGTGGAAGTGTTCCTGTCTCAATAGCTCCAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | CTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGGACACTTCCACGCACATaGACAGTTAAACAACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LIRATSRVRAKGPIKARRTLPRT*TVKQLE Trigger: CTCAAGTTGTTTAACTGTGCATGTGCGTGGAAGTGT...CCTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | ACTGACACTACGCGGGATCCGCTAATACTGCTCAGTACTTTAAACGCTCAGATACACTTCCAGAGTTCGTaGAAAGGGTCCTATAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TDTTRDPLILLSTLNAQIHFQSS*KGSYKG Trigger: GCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTG...TATCTGAGCGTTTAAAGTACTGAGCAGTATTAGCGGATCCCGCGTAGTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | GCTGCGCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCAAAAAACATACATCACTaGAGCTGCGCTTATAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: AALIRATSRVRAKGPIKAKNIHH*SCAYKS Trigger: GCTCTTATAAGCGCAGCTTCAGTGATGTATGTTTTT...TGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGCGCAGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | CACACCGCTTGGAGTCACAGTTTTCATCACAGAGTCACTAGTCACTACACGTCGAAGCTGATCACAGTTTaGTTAAAACAGCCAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: HTAWSHSFHHRVTSHYTSKLITV*LKQPDL Trigger: CAAGTCTGGCTGTTTTAAGCAAACTGTGATCAGCTT...CGACGTGTAGTGACTAGTGACTCTGTGATGAAAACTGTGACTCCAAGCGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CCA 90 bp | ACACGTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATTACTGTGTGCTTGATTTGTaGCTCGCGGTCGTTTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: TRRTSCVSSSHLYNSINYCVLDL*LAVVCA Trigger: CGCACAAACGACCGCGAGCCACAAATCAAGCACACA...GTAATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGACGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | TGCGCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGATAGCGACCGCAAAATaGGTTTACAAAATAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: CAYKSHFQSSCKGSYKGTIATAK*VYKIRA Trigger: AGCTCTTATTTTGTAAACTCATTTTGCGGTCGCTAT...CGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGCGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | TTAAAAGATGAATTAGGGCAACGAGAACAGGGCTTCTTCACAGAAGGAACACAAACAGCTTGGAGCTATTaGGACAGGAACACTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: LKDELGQREQGFFTEGTQTAWSY*DRNTST Trigger: CGTGGAAGTGTTCCTGTCTCAATAGCTCCAAGCTGT...TTGTGTTCCTTCTGTGAAGAAGCCCTGTTCTCGTTGCCCTAATTCATCTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | GTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATTACACAACTCCTGCCGCGGCCATaGTCATGCTTTTCAGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: VEQVVSHQVTSTTALITQLLPRP*SCFSAY Trigger: ATAAGCTGAAAAGCATGAGCATGGCCGCGGCAGGAG...TTGTGTAATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| 3UTR CAA 72 bp | CAGGAACACTTCCACGCACATGCACAGTTAAACAACTaGAGTGCAACACACAACATTGGCACTAAACGAGAT | + |
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Preference number: 4 (lower is better) Translates to: QEHFHAHAQLNN*SATHNIGTKRD Trigger: ATCTCGTTTAGTGCCAATGTTGTGTGTTGCACTCAAGTTGTTTAACTGTGCATGTGCGTGGAAGTGTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | CGTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATTACACATTTGATATGTGTGCTTaGTTTGTGGCTCGCGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: RRTSCVSSSHLYNSINYTFDMCA*FVARGR Trigger: ACGACCGCGAGCCACAAATCAAGCACACATATCAAA...TGTGTAATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | GTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATTACACAAGACTTATGTGCAGCTTaGGCATCCAGGGGTAGATCT | + |
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Preference number: 4 (lower is better) Translates to: VEQVVSHQVTSTTALITQDLCAA*ASRGRS Trigger: AGATCTACCCCTGGATGCGCAAGCTGCACATAAGTC...TTGTGTAATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR TCA 90 bp | CAGCTTGGAGCTATTGAGACAGGAACACTTCCACGCACATGCACAGTTAAACAACTCATGATTAAAAGATaGATTAGGGCAACGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: QLGAIETGTLPRTCTVKQLMIKR*IRATRT Trigger: TGTTCTCGTTGCCCTAATTCATCTTTTAATCATGAG...TTGTTTAACTGTGCATGTGCGTGGAAGTGTTCCTGTCTCAATAGCTCCAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR GCA 90 bp | GTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATTACACAAGTTAAACAACTTGAGTaGAACACACAACATTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: VEQVVSHQVTSTTALITQVKQLE*NTQHWH Trigger: GTGCCAATGTTGTGTGTTGCACTCAAGTTGTTTAAC...TTGTGTAATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS GCA 90 bp | CGGGCGGCGCCGGGCTCGGCTCGCTCTGCGCACTCGCCTGCTCGCTaGTGGCAGGGGCGTCCTCCTCGGCTCCGGACGCCGTGCCAACCC | + |
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Preference number: 5 (lower is better) Translates to: RAAPGSARSAHSPAR*WQGRPPRLRTPCQP Trigger: GGGTTGGCACGGCGTCCGGAGCCGAGGAGGACGCCCCTGCCAGCAGCGAGCAGGCGAGTGCGCAGAGCGAGCCGAGCCCGGCGCCGCCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS GCA 90 bp | GGTTGGGCGGGCGGCGCCGGGCTCGGCTCGCTCTGCGCACTCGCCTaGTCGCTGCTGGCAGGGGCGTCCTCCTCGGCTCCGGACGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: GWAGGAGLGSLCALA*SLLAGASSSAPDAV Trigger: CACGGCGTCCGGAGCCGAGGAGGACGCCCCTGCCAGCAGCGAGCAGGCGAGTGCGCAGAGCGAGCCGAGCCCGGCGCCGCCCGCCCAACC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS CCA 90 bp | GGGCCACGGCGGAGCAGGGCAGCGGATCGGGCTGAGGAGAGTGCGTaGACGTGGCCGGCTGGCTGTACCTGGGCTCGGCGGGCGCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: GPRRSRAADRAEESA*TWPAGCTWARRAPR Trigger: GCGCGGCGCCCGCCGAGCCCAGGTACAGCCAGCCGGCCACGTCCACGCACTCTCCTCAGCCCGATCCGCTGCCCTGCTCCGCCGTGGCCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS CCA 90 bp | GCGGCGCCGGGCTCGGCTCGCTCTGCGCACTCGCCTGCTCGCTGCTaGCAGGGGCGTCCTCCTCGGCTCCGGACGCCGTGCCAACCCCCT | + |
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Preference number: 5 (lower is better) Translates to: AAPGSARSAHSPARC*QGRPPRLRTPCQPP Trigger: AGGGGGTTGGCACGGCGTCCGGAGCCGAGGAGGACGCCCCTGCCAGCAGCGAGCAGGCGAGTGCGCAGAGCGAGCCGAGCCCGGCGCCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS GCA 90 bp | CGCTGGAGTTGCTTAGGGAGTTTTTCCCGCCGTGGTGGCTGTCGCTaGCGGGCGAGGGGGCCACGGCGGAGCAGGGCAGCGGATCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RWSCLGSFSRRGGCR*RARGPRRSRAADRA Trigger: AGCCCGATCCGCTGCCCTGCTCCGCCGTGGCCCCCTCGCCCGGCAGCGACAGCCACCACGGCGGGAAAAACTCCCTAAGCAACTCCAGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS TCA 90 bp | CGCGCTCTCCGGAGCCAAAGTGGCCGGAGCCCGAGCGGCCGACGCTaGGATCCATGCCATTGTAGCCGTAGCCGTACCTGCCGGAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: RALRSQSGRSPSGRR*DPCHCSRSRTCRSA Trigger: TGCACTCCGGCAGGTACGGCTACGGCTACAATGGCATGGATCTCAGCGTCGGCCGCTCGGGCTCCGGCCACTTTGGCTCCGGAGAGCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | AAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGGGACACGTGGCTCGCGGTCGTTaGTGCGTCTATAGCACCCTT | + |
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Preference number: 5 (lower is better) Translates to: KSHFQSSCKGSYKGTQGHVARGR*CVYSTL Trigger: AAGGGTGCTATAGACGCACAAACGACCGCGAGCCAC...GTGTCCCTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | GTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATTACACAAGGGGTAGATCTGGGGTaGGGCGGGCGGCGCCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: VEQVVSHQVTSTTALITQGVDLG*GGRRRA Trigger: AGCCCGGCGCCGCCCGCCCAACCCCAGATCTACCCC...TTGTGTAATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS TCA 90 bp | TGTAGCCGTAGCCGTACCTGCCGGAGTGCATGCTCGCCGAGTCCCTaGATTGCTCGCTCACGGAACTATGATCTCCATAATTATGCAACT | + |
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Preference number: 5 (lower is better) Translates to: CSRSRTCRSACSPSP*IARSRNYDLHNYAT Trigger: AGTTGCATAATTATGGAGATCATAGTTCCGTGAGCGAGCAATTCAGGGACTCGGCGAGCATGCACTCCGGCAGGTACGGCTACGGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | GAATTAGGGCAACGAGAACAGGGCTTCTTCACAGAAGGAACACAAGGGAGTTTCGAGGCGCCGCTGGAGTaGCTTAGGGAGTTTTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: ELGQREQGFFTEGTQGSFEAPLE*LREFFP Trigger: CGGGAAAAACTCCCTAAGCAACTCCAGCGGCGCCTC...GAAACTCCCTTGTGTTCCTTCTGTGAAGAAGCCCTGTTCTCGTTGCCCTAATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | GAATTAGGGCAACGAGAACAGGGCTTCTTCACAGAAGGAACACAAGGGAGTTTCCGCCGAGTCCCTGAATaGCTCGCTCACGGAACTATG | + |
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Preference number: 5 (lower is better) Translates to: ELGQREQGFFTEGTQGSFRRVPE*LAHGTM Trigger: CATAGTTCCGTGAGCGAGCAATTCAGGGACTCGGCG...GAAACTCCCTTGTGTTCCTTCTGTGAAGAAGCCCTGTTCTCGTTGCCCTAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | AGTCACCTTAGTACTGACACTACGCGGGATCCGCTAATACTGCTCAGTACTTTAGGTAGTCCGGGCCATTaGGATAGCGACCGCAAAATG | + |
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Preference number: 5 (lower is better) Translates to: SHLSTDTTRDPLILLSTLGSPGH*DSDRKM Trigger: CATTTTGCGGTCGCTATCCAAATGGCCCGGACTACC...TAAAGTACTGAGCAGTATTAGCGGATCCCGCGTAGTGTCAGTACTAAGGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | CACACCGCTTGGAGTCACAGTTTTCATCACAGAGTCACTAGTCACTACACGTCGTACACGTCGAACAAGTaGTGTCTCATCAAGTCACCT | + |
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Preference number: 5 (lower is better) Translates to: HTAWSHSFHHRVTSHYTSYTSNK*CLIKSP Trigger: AGGTGACTTGATGAGACACAACTTGTTCGACGTGTA...CGACGTGTAGTGACTAGTGACTCTGTGATGAAAACTGTGACTCCAAGCGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | ACTGACACTACGCGGGATCCGCTAATACTGCTCAGTACTTTAAACGCTCAGATAATATGTGTGCTTGATTaGTGGCTCGCGGTCGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: TDTTRDPLILLSTLNAQIICVLD*WLAVVC Trigger: ACAAACGACCGCGAGCCACAAATCAAGCACACATAT...TATCTGAGCGTTTAAAGTACTGAGCAGTATTAGCGGATCCCGCGTAGTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | GCTTATAAGAGCCACTTCCAGAGTTCGTGCAAAGGGTCCTATAAAGGCACGCAGGTGCAACACACAACATaGGCACTAAACGAGATTGAA | + |
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Preference number: 5 (lower is better) Translates to: AYKSHFQSSCKGSYKGTQVQHTT*ALNEIE Trigger: TTCAATCTCGTTTAGTGCCAATGTTGTGTGTTGCAC...CTGCGTGCCTTTATAGGACCCTTTGCACGAACTCTGGAAGTGGCTCTTATAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | ACTGACACTACGCGGGATCCGCTAATACTGCTCAGTACTTTAAACGCTCAGATAAACAGCTTGGAGCTATaGAGACAGGAACACTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: TDTTRDPLILLSTLNAQINSLEL*RQEHFH Trigger: GTGGAAGTGTTCCTGTCTCAATAGCTCCAAGCTGTT...TATCTGAGCGTTTAAAGTACTGAGCAGTATTAGCGGATCCCGCGTAGTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | CACACCGCTTGGAGTCACAGTTTTCATCACAGAGTCACTAGTCACTACACGTCGAAAGCTGATCACAGTTaGCTTAAAACAGCCAGACTT | + |
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Preference number: 5 (lower is better) Translates to: HTAWSHSFHHRVTSHYTSKADHS*LKTARL Trigger: AAGTCTGGCTGTTTTAAGCAAACTGTGATCAGCTTT...CGACGTGTAGTGACTAGTGACTCTGTGATGAAAACTGTGACTCCAAGCGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS-3UTR CAA 90 bp | ACACGTCGAACAAGTTGTGTCTCATCAAGTCACCTCTACAACAGCATTAATTACAATATCTTTAACAGCTaGGAGCTATTGAGACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: TRRTSCVSSSHLYNSINYNIFNS*ELLRQE Trigger: TTCCTGTCTCAATAGCTCCAAGCTGTTAAAGATATT...GTAATTAATGCTGTTGTAGAGGTGACTTGATGAGACACAACTTGTTCGACGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS GCA 72 bp | GGCGGCGCCGGGCTCGGCTCGCTCTGCGCACTCGCCTaGTCGCTGCTGGCAGGGGCGTCCTCCTCGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: GGAGLGSLCALA*SLLAGASSSAP Trigger: CGGAGCCGAGGAGGACGCCCCTGCCAGCAGCGAGCAGGCGAGTGCGCAGAGCGAGCCGAGCCCGGCGCCGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS GCA 72 bp | TGGGGTTGGGCGGGCGGCGCCGGGCTCGGCTCGCTCTaGGCACTCGCCTGCTCGCTGCTGGCAGGGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: WGWAGGAGLGSL*ALACSLLAGAS Trigger: GGACGCCCCTGCCAGCAGCGAGCAGGCGAGTGCGCAGAGCGAGCCGAGCCCGGCGCCGCCCGCCCAACCCCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS GCA 72 bp | CCGGGCTCGGCTCGCTCTGCGCACTCGCCTGCTCGCTaGTGGCAGGGGCGTCCTCCTCGGCTCCGGACGCCG | + |
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Preference number: 6 (lower is better) Translates to: PGSARSAHSPAR*WQGRPPRLRTP Trigger: CGGCGTCCGGAGCCGAGGAGGACGCCCCTGCCAGCAGCGAGCAGGCGAGTGCGCAGAGCGAGCCGAGCCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS TCA 72 bp | GAGGGGGCCACGGCGGAGCAGGGCAGCGGATCGGGCTaGGGAGAGTGCGTGGACGTGGCCGGCTGGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: EGATAEQGSGSG*GECVDVAGWLY Trigger: GTACAGCCAGCCGGCCACGTCCACGCACTCTCCTCAGCCCGATCCGCTGCCCTGCTCCGCCGTGGCCCCCTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS GCA 72 bp | TGCTTAGGGAGTTTTTCCCGCCGTGGTGGCTGTCGCTaGCGGGCGAGGGGGCCACGGCGGAGCAGGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: CLGSFSRRGGCR*RARGPRRSRAA Trigger: CGCTGCCCTGCTCCGCCGTGGCCCCCTCGCCCGGCAGCGACAGCCACCACGGCGGGAAAAACTCCCTAAGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS GCA 72 bp | GGGTGCTGCCGGCGTCGGCCGAGGCGCCGCTGGAGTTaGTTAGGGAGTTTTTCCCGCCGTGGTGGCTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: GCCRRRPRRRWS*LGSFSRRGGCR Trigger: GCGACAGCCACCACGGCGGGAAAAACTCCCTAAGCAACTCCAGCGGCGCCTCGGCCGACGCCGGCAGCACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS CCA 72 bp | CCGCTGGAGTTGCTTAGGGAGTTTTTCCCGCCGTGGTaGCTGTCGCTGCCGGGCGAGGGGGCCACGGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: PLELLREFFPPW*LSLPGEGATAE Trigger: CTCCGCCGTGGCCCCCTCGCCCGGCAGCGACAGCCACCACGGCGGGAAAAACTCCCTAAGCAACTCCAGCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS CAA 90 bp | CTGCTGATGTGGGTGCTGCCGGCGTCGGCCGAGGCGCCGCTGGAGTaGCTTAGGGAGTTTTTCCCGCCGTGGTGGCTGTCGCTGCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: LLMWVLPASAEAPLE*LREFFPPWWLSLPG Trigger: GCCCGGCAGCGACAGCCACCACGGCGGGAAAAACTCCCTAAGCAACTCCAGCGGCGCCTCGGCCGACGCCGGCAGCACCCACATCAGCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS CAA 72 bp | TGGGTGCTGCCGGCGTCGGCCGAGGCGCCGCTGGAGTaGCTTAGGGAGTTTTTCCCGCCGTGGTGGCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: WVLPASAEAPLE*LREFFPPWWLS Trigger: CGACAGCCACCACGGCGGGAAAAACTCCCTAAGCAACTCCAGCGGCGCCTCGGCCGACGCCGGCAGCACCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS CAA 90 bp | GTCATGACTTATGTGCAGCTTGCGCATCCAGGGGTAGATCTGGGGTaGGGCGGGCGGCGCCGGGCTCGGCTCGCTCTGCGCACTCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VMTYVQLAHPGVDLG*GGRRRARLALRTRL Trigger: CAGGCGAGTGCGCAGAGCGAGCCGAGCCCGGCGCCGCCCGCCCAACCCCAGATCTACCCCTGGATGCGCAAGCTGCACATAAGTCATGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS TCA 72 bp | CGGAGCCAAAGTGGCCGGAGCCCGAGCGGCCGACGCTaGGATCCATGCCATTGTAGCCGTAGCCGTACCTGC | + |
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Preference number: 6 (lower is better) Translates to: RSQSGRSPSGRR*DPCHCSRSRTC Trigger: GCAGGTACGGCTACGGCTACAATGGCATGGATCTCAGCGTCGGCCGCTCGGGCTCCGGCCACTTTGGCTCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS GCA 72 bp | CCGGGCCGCCTATGTTGTCATGACTTATGTGCAGCTTaGGCATCCAGGGGTAGATCTGGGGTTGGGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PGRLCCHDLCAA*ASRGRSGVGRA Trigger: CGCCCGCCCAACCCCAGATCTACCCCTGGATGCGCAAGCTGCACATAAGTCATGACAACATAGGCGGCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS TCA 72 bp | AGCCGTACCTGCCGGAGTGCATGCTCGCCGAGTCCCTaGATTGCTCGCTCACGGAACTATGATCTCCATAAT | + |
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Preference number: 6 (lower is better) Translates to: SRTCRSACSPSP*IARSRNYDLHN Trigger: ATTATGGAGATCATAGTTCCGTGAGCGAGCAATTCAGGGACTCGGCGAGCATGCACTCCGGCAGGTACGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS CAA 90 bp | GCCGTAGCCGTACCTGCCGGAGTGCATGCTCGCCGAGTCCCTGAATaGCTCGCTCACGGAACTATGATCTCCATAATTATGCAACTGGTA | + |
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Preference number: 6 (lower is better) Translates to: AVAVPAGVHARRVPE*LAHGTMISIIMQLV Trigger: TACCAGTTGCATAATTATGGAGATCATAGTTCCGTGAGCGAGCAATTCAGGGACTCGGCGAGCATGCACTCCGGCAGGTACGGCTACGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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| CDS CAA 72 bp | GTACCTGCCGGAGTGCATGCTCGCCGAGTCCCTGAATaGCTCGCTCACGGAACTATGATCTCCATAATTATG | + |
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Preference number: 6 (lower is better) Translates to: VPAGVHARRVPE*LAHGTMISIIM Trigger: CATAATTATGGAGATCATAGTTCCGTGAGCGAGCAATTCAGGGACTCGGCGAGCATGCACTCCGGCAGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222726.4 |
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