RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HOXA11 (Homo sapiens)

Ensembl gene IDs: ENSG00000005073

Ensembl transcript IDs: ENST00000006015.4, ENST00000517402.1

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTaGAGCCTCTTGGCTTTTCCACATCTCCCACCTCAGGGAACAGTC +
Preference number: 1 (lower is better)
Translates to: STAISCRDLRGQWPG*SLLAFPHLPPQGTV
Trigger: GACTGTTCCCTGAGGTGGGAGATGTGGAAAAGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR GCA 90 bp TGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTaGAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGGCT +
Preference number: 1 (lower is better)
Translates to: CGGEFAKLPHSTAIS*RDLRGQWPGCSLLA
Trigger: AGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CCA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTaGCTGCAGCCTCTTGGCTTTTCCACATCTCCCACCTCAGGGAAC +
Preference number: 1 (lower is better)
Translates to: TLHSHFLQRSQGPVA*LQPLGFSTSPTSGN
Trigger: GTTCCCTGAGGTGGGAGATGTGGAAAAGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CCA 90 bp TTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTaGCTTTTCCACATCTCCCACCTCAGGGAACAGTCCACTCTGTGT +
Preference number: 1 (lower is better)
Translates to: FPAEISGASGLAAAS*LFHISHLREQSTLC
Trigger: ACACAGAGTGGACTGTTCCCTGAGGTGGGAGATGTGGAAAAGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR TCA 90 bp AGGTCACCAGAAGCTTCCAAGCTCAGTTCAAGAGCCAATGAGGGCTaGGTGTGGTGCTGGAACCCGGTGTTTTGGGGGACTCAAGGCCCT +
Preference number: 1 (lower is better)
Translates to: RSPEASKLSSRANEG*VWCWNPVFWGTQGP
Trigger: AGGGCCTTGAGTCCCCCAAAACACCGGGTTCCAGCACCACACTCAGCCCTCATTGGCTCTTGAACTGAGCTTGGAAGCTTCTGGTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CCA 90 bp CACCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTaGAAAGCAGCCTCATTCTGGGCACCTAGTAATCCTACCCCTTCC +
Preference number: 1 (lower is better)
Translates to: HLKATSKSSRCSHWL*KAASFWAPSNPTPS
Trigger: GGAAGGGGTAGGATTACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CCA 90 bp CTCTTCCACCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTaGCTTTGGAAAGCAGCCTCATTCTGGGCACCTAGTAATCCTACC +
Preference number: 1 (lower is better)
Translates to: LFHLKATSKSSRCSH*LWKAASFWAPSNPT
Trigger: GGTAGGATTACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGGTGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR GCA 90 bp GAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTaGCACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: EQIQVSLRVVESLPN*HTPQPFPAEISGAS
Trigger: ACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CCA 90 bp CTCTGCAGCCAGACACTGAGCAAATCCAAGTTTCATTACGTGTGGTaGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: LCSQTLSKSKFHYVW*RVCQTATLHSHFLQ
Trigger: CTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CCA 90 bp CTGCTCTGCAGCCAGACACTGAGCAAATCCAAGTTTCATTACGTGTaGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTG +
Preference number: 1 (lower is better)
Translates to: LLCSQTLSKSKFHYV*WRVCQTATLHSHFL
Trigger: CAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR TCA 90 bp GCCTGTATAAGTGCTGCAACACACACGGTGGGTAAGAACCAGAATTaGGGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACAT +
Preference number: 1 (lower is better)
Translates to: ACISAATHTVGKNQN*GQANTPSTNGANRH
Trigger: ATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTGTTGCAGCACTTATACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR CCA 90 bp TTAACCACTGAGATCTTAATCAAGAGAGTCCCAGACCACCTCCTGTaGGGCTATCTCCATGCATCCCTCTCTTGCACACCTCTTTTCAAA +
Preference number: 1 (lower is better)
Translates to: LTTEILIKRVPDHLL*GYLHASLSCTPLFK
Trigger: TTTGAAAAGAGGTGTGCAAGAGAGGGATGCATGGAGATAGCCCCACAGGAGGTGGTCTGGGACTCTCTTGATTAAGATCTCAGTGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR TCA 90 bp ATGCACAGCTCTCAGAATCCAATGATTATTAGGAATCTTAACCACTaGGATCTTAATCAAGAGAGTCCCAGACCACCTCCTGTGGGGCTA +
Preference number: 1 (lower is better)
Translates to: MHSSQNPMIIRNLNH*DLNQESPRPPPVGL
Trigger: TAGCCCCACAGGAGGTGGTCTGGGACTCTCTTGATTAAGATCTCAGTGGTTAAGATTCCTAATAATCATTGGATTCTGAGAGCTGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR GCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTTCCACAGCCATTTCCTaGAGAGATCTCAGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: GGLKALIAKAGDLLARPTSTAIS*RDLRGQ
Trigger: CTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGA...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR TCA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGTCGAGGCTTTGGGCCTaGGTGGCAGGCTGGAACCAA +
Preference number: 2 (lower is better)
Translates to: TLHSHFLQRSQGPVAWLQSRLWA*VAGWNQ
Trigger: TTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGA...CTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp CACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCCAGACCACCTCCTGTaGGGCTATCTCCATGCATCC +
Preference number: 2 (lower is better)
Translates to: HSTAISCRDLRGQWPGCSPDHLL*GYLHAS
Trigger: GGATGCATGGAGATAGCCCCACAGGAGGTGGTCTGG...GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp CACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCGCTGGATCAGTGTGGTaGGTGGCTAGGAGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: HSTAISCRDLRGQWPGCSAGSVW*VARRSG
Trigger: TCCACTCCTCCTAGCCACCCACCACACTGATCCAGC...GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR GCA 90 bp CACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCGTGGGGCTATCTCCATaGATCCCTCTCTTGCACACC +
Preference number: 2 (lower is better)
Translates to: HSTAISCRDLRGQWPGCSVGLSP*IPLLHT
Trigger: GGTGTGCAAGAGAGGGATGCATGGAGATAGCCCCAC...GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGTCCCCAAGCTGAACTaGGCTTGGAGAGCACACAGC +
Preference number: 2 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQVPKLN*AWRAHS
Trigger: GCTGTGTGCTCTCCAAGCCCAGTTCAGCTTGGGGAC...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGAGGGCTGGATCAGTGTaGTGGGTGGCTAGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLRAGSV*WVARRS
Trigger: ACTCCTCCTAGCCACCCACCACACTGATCCAGCCCT...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp ACACAGGGAGGCAAAGGAGATTCAATGGGAGGGTGCCTGGCTTTCCCAGATGAGAAGCTGGGGACCTGCTaGCCAGGCCCACTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: TQGGKGDSMGGCLAFPDEKLGTC*PGPLLC
Trigger: GCAGAGCAGTGGGCCTGGCCAGCAGGTCCCCAGCTT...CTCATCTGGGAAAGCCAGGCACCCTCCCATTGAATCTCCTTTGCCTCCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CCA 90 bp GGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATGTTGCTTTACTCAGGGGTCCTaGGGGTGGGTAGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GRPGRLPLSISLTLSKCCFTQGS*GWVGSQ
Trigger: CTGGGAGCCTACCCACCCCCAGGACCCCTGAGTAAA...GCAACATTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTAAAGCAGCCTCATTCTaGGCACCTAGTAATCCTACC +
Preference number: 2 (lower is better)
Translates to: GGLKALIAKAGDLLARPTKAASF*APSNPT
Trigger: GGTAGGATTACTAGGTGCCCAGAATGAGGCTGCTTT...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp TGCTGGCCAGGCCCACTGCTCTGCAGCCAGACACTGAGCAAATCCAAGTTTCATGATCTCAGGGGCCAGTaGCCTGGCTGCAGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: CWPGPLLCSQTLSKSKFHDLRGQ*PGCSLL
Trigger: CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATC...ATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAGAGCAGTGGGCCTGGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CAA 90 bp ATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTaGGCTTTTCCACATCTCCCACCTCAGGGAACAGTCCACTCTGTG +
Preference number: 2 (lower is better)
Translates to: ISCRDLRGQWPGCSL*AFPHLPPQGTVHSV
Trigger: CACAGAGTGGACTGTTCCCTGAGGTGGGAGATGTGGAAAAGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp GTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGGCTTTGGGCCTGAGTaGCAGGCTGGAACCAAGACC +
Preference number: 2 (lower is better)
Translates to: VCQTATLHSHFLQRSQGPGFGPE*QAGTKT
Trigger: GGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCC...TGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CAA 90 bp TCCACATCTCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTaGGGCCTGAGTGGCAGGCTGGAACCAAGACCCTCATTTGGTAGA +
Preference number: 2 (lower is better)
Translates to: STSPTSGNSPLCVEA*GLSGRLEPRPSFGR
Trigger: TCTACCAAATGAGGGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGAGATGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR GCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGACCTACCCCTTCCTCCTaGCCCTGTCCCCAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRPTPSS*PCPQAE
Trigger: TTCAGCTTGGGGACAGGGGCAGGAGGAAGGGGTAGG...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp GTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGAAAGAAAAGCCAGGTaGGCTGTAGGAGGCGGTGGC +
Preference number: 2 (lower is better)
Translates to: VCQTATLHSHFLQRSQGPERKAR*AVGGGG
Trigger: GCCACCGCCTCCTACAGCCCACCTGGCTTTTCTTTC...TGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAACAGGGGCCAGTGGCCTaGCTGCAGCCTCTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQQGPVA*LQPLGF
Trigger: AAAGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTG...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CCA 90 bp GACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCGGGCCCAATCCCCAGTaGAGACCACACCCAGCCCGC +
Preference number: 2 (lower is better)
Translates to: DTEQIQVSLRVVESLPNCGPNPQ*RPHPAR
Trigger: GCGGGCTGGGTGTGGTCTCCACTGGGGATTGGGCCC...GCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGAAAGCAGCCTCATTCTaGGCACCTAGTAATCCTACC +
Preference number: 2 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQKAASF*APSNPT
Trigger: GGTAGGATTACTAGGTGCCCAGAATGAGGCTGCTTT...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGAAAGAAAAGCCAGGTaGGCTGTAGGAGGCGGTGGC +
Preference number: 2 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRERKAR*AVGGGG
Trigger: GCCACCGCCTCCTACAGCCCACCTGGCTTTTCTTTC...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp TCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATCACTCTCAGGCTCTTaGAAGGTCACCAGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: SPGRPGRLPLSISLTLSKSLSGS*KVTRSF
Trigger: GAAGCTTCTGGTGACCTTCCAAGAGCCTGAGAGTGA...TTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR TCA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTAGTCACCATGTGGCTTaGCTTTGTCAAGGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: HLREQSTLCRGFGPEWQASHHVA*LCQGQN
Trigger: ATTTTGCCCTTGACAAAGTCAAGCCACATGGTGACT...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR TCA 90 bp CTGCAGCCAGACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCCCTGTCCCCAAGCTaGACTGGGCTTGGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: LQPDTEQIQVSLRVVESLPLSPS*TGLGEH
Trigger: GTGCTCTCCAAGCCCAGTTCAGCTTGGGGACAGGGG...CAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR GCA 90 bp TCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATTTCCCACAAGGATTTaGAGCCCTCTTCCACCTCAA +
Preference number: 2 (lower is better)
Translates to: SPGRPGRLPLSISLTLSKFPTRI*SPLPPQ
Trigger: TTGAGGTGGAAGAGGGCTGCAAATCCTTGTGGGAAA...TTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CCA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTTCAAAAGTCACCATGTaGCTTGACTTTGTCAAGGGC +
Preference number: 2 (lower is better)
Translates to: HLREQSTLCRGFGPEWQASKVTM*LDFVKG
Trigger: GCCCTTGACAAAGTCAAGCCACATGGTGACTTTTGA...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR TCA 90 bp TCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGACCCCTGTCCCCAAGCTaGACTGGGCTTGGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: SQYKWSQQTFLNTGRQRRPLSPS*TGLGEH
Trigger: GTGCTCTCCAAGCCCAGTTCAGCTTGGGGACAGGGG...TCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR TCA 90 bp TCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATCTGCAGCCAGACACTaGGCAAATCCAAGTTTCATT +
Preference number: 2 (lower is better)
Translates to: SPGRPGRLPLSISLTLSKSAARH*ANPSFI
Trigger: AATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAGA...TTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CCA 90 bp GTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAAGCCGCTGTTCACATTaGCTTTGGAAAGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: VCQTATLHSHFLQRSQGPSRCSH*LWKAAS
Trigger: TGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCT...TGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp TCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGAGATCTCAGGGGCCAGTaGCCTGGCTGCAGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: SQYKWSQQTFLNTGRQRRDLRGQ*PGCSLL
Trigger: CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATC...TCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAACAATGGGAGGGTGCCTaGCTTTCCCAGATGAGATCC +
Preference number: 2 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQQWEGA*LSQMRS
Trigger: GGATCTCATCTGGGAAAGCCAGGCACCCTCCCATTG...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR GCA 90 bp GACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCCTACCCCTTCCTCCTaGCCCTGTCCCCAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: DTEQIQVSLRVVESLPNCPTPSS*PCPQAE
Trigger: TTCAGCTTGGGGACAGGGGCAGGAGGAAGGGGTAGG...GCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATCCAGACCACCTCCTGTaGGGCTATCTCCATGCATCC +
Preference number: 2 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHPDHLL*GYLHAS
Trigger: GGATGCATGGAGATAGCCCCACAGGAGGTGGTCTGG...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp GGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGTCCCCAAGCTGAACTaGGCTTGGAGAGCACACAGC +
Preference number: 2 (lower is better)
Translates to: GQANTPSTNGANRHFLTQVPKLN*AWRAHS
Trigger: GCTGTGTGCTCTCCAAGCCCAGTTCAGCTTGGGGAC...CTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGACACTGATGCCACCTaGAATCATAGATTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQDTDAT*NHRFLF
Trigger: GAAAAGAAATCTATGATTCCAGGTGGCATCAGTGTC...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAAGATCAGTGTGGTGGGTaGCTAGGAGGAGTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQDQCGG*LGGVER
Trigger: TCTTTCCACTCCTCCTAGCCACCCACCACACTGATC...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR TCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGAGGAATCTTAACCACTaGGATCTTAATCAAGAGAGT +
Preference number: 2 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQRNLNH*DLNQES
Trigger: ACTCTCTTGATTAAGATCTCAGTGGTTAAGATTCCT...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR GCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGATTTCCCACAAGGATTTaGAGCCCTCTTCCACCTCAA +
Preference number: 2 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRFPTRI*SPLPPQ
Trigger: TTGAGGTGGAAGAGGGCTGCAAATCCTTGTGGGAAA...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp TCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGACTAGGAACTCAGGGCTaGATCAGTGTGGTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: SQYKWSQQTFLNTGRQRRLGTQG*ISVVGG
Trigger: GCCACCCACCACACTGATCCAGCCCTGAGTTCCTAG...TCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR CAA 90 bp ACACTGATGCCACCTGGAATCATAGATTTCTTTTCCCACAAGGATTaGCAGCCCTCTTCCACCTCAAAGCTACCTCCAAGTCCAGCCGCT +
Preference number: 2 (lower is better)
Translates to: TLMPPGIIDFFSHKD*QPSSTSKLPPSPAA
Trigger: AGCGGCTGGACTTGGAGGTAGCTTTGAGGTGGAAGAGGGCTGCAAATCCTTGTGGGAAAAGAAATCTATGATTCCAGGTGGCATCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR TCA 90 bp CAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGATTCTGCAGGCTCCAAGAGTaGACCACCAGGGGTCCCAAA +
Preference number: 2 (lower is better)
Translates to: QYKWSQQTFLNTGRQRRFCRLQE*TTRGPK
Trigger: TTTGGGACCCCTGGTGGTTCACTCTTGGAGCCTGCA...GAATCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR CAA 90 bp CCAGACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTaGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGATCTCA +
Preference number: 2 (lower is better)
Translates to: PDTEQIQVSLRVVES*PNCHTPQPFPAEIS
Trigger: TGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp CTGCAGCCAGACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGAGCCGCTGTTCACATTaGCTTTGGAAAGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: LQPDTEQIQVSLRVVESLSRCSH*LWKAAS
Trigger: TGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCT...CAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR TCA 90 bp ATCTTAACCACTGAGATCTTAATCAAGAGAGTCCCAGACCACCTCCTGTGGGGCAGTCACCATGTGGCTTaGCTTTGTCAAGGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: ILTTEILIKRVPDHLLWGSHHVA*LCQGQN
Trigger: ATTTTGCCCTTGACAAAGTCAAGCCACATGGTGACT...GCCCCACAGGAGGTGGTCTGGGACTCTCTTGATTAAGATCTCAGTGGTTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR GCA 90 bp GTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTCAAGGGCAAAATCTaGATATTATCTCATGTGTAT +
Preference number: 2 (lower is better)
Translates to: VCQTATLHSHFLQRSQGPVKGKI*ILSHVY
Trigger: ATACACATGAGATAATATGCAGATTTTGCCCTTGAC...TGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTCAAAAGTCACCATGTaGCTTGACTTTGTCAAGGGC +
Preference number: 2 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHSKVTM*LDFVKG
Trigger: GCCCTTGACAAAGTCAAGCCACATGGTGACTTTTGA...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR TCA 90 bp AGGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAAGGAATCTTAACCACTaGGATCTTAATCAAGAGAGT +
Preference number: 2 (lower is better)
Translates to: RTGQHSQYKWSQQTFLNTRNLNH*DLNQES
Trigger: ACTCTCTTGATTAAGATCTCAGTGGTTAAGATTCCT...TGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR GCA 90 bp CAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGATTCGTCAAGGGCAAAATCTaGATATTATCTCATGTGTAT +
Preference number: 2 (lower is better)
Translates to: QYKWSQQTFLNTGRQRRFVKGKI*ILSHVY
Trigger: ATACACATGAGATAATATGCAGATTTTGCCCTTGAC...GAATCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR CCA 72 bp CACAGGGAGGCAAAGGAGATTCAATGGGAGGGTGCCTaGCTTTCCCAGATGAGATCCCCAGGCCGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: HREAKEIQWEGA*LSQMRSPGRPG
Trigger: GCCTGGCCGGCCTGGGGATCTCATCTGGGAAAGCCAGGCACCCTCCCATTGAATCTCCTTTGCCTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR TCA 72 bp ACCACACCCAGCCCGCAGCTCTGCAGGCTCCAAGAGTaGACCACCAGGGGTCCCAAACCTGTCATTCTAGCT +
Preference number: 3 (lower is better)
Translates to: TTPSPQLCRLQE*TTRGPKPVILA
Trigger: AGCTAGAATGACAGGTTTGGGACCCCTGGTGGTTCACTCTTGGAGCCTGCAGAGCTGCGGGCTGGGTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR GCA 72 bp GAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTaGAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: EFAKLPHSTAIS*RDLRGQWPGCS
Trigger: GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CCA 72 bp AGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTaGCTGCAGCCTCTTGGCTTTTCCACATCTCCCACC +
Preference number: 3 (lower is better)
Translates to: SHFLQRSQGPVA*LQPLGFSTSPT
Trigger: GGTGGGAGATGTGGAAAAGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CAA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTCTGTTCACATTGGCTTaGGAAAGCAGCCTCATTCTG +
Preference number: 3 (lower is better)
Translates to: GGLKALIAKAGDLLARPTLFTLA*ESSLIL
Trigger: CAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAG...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR GCA 72 bp ATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTaGAGCCTCTTGGCTTTTCCACATCTCCCACCTCAG +
Preference number: 3 (lower is better)
Translates to: ISCRDLRGQWPG*SLLAFPHLPPQ
Trigger: CTGAGGTGGGAGATGTGGAAAAGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CAA 90 bp TCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAACAAGCTGAACTGGGCTaGGAGAGCACACAGCTTTTT +
Preference number: 3 (lower is better)
Translates to: SPGRPGRLPLSISLTLSKQAELG*ESTQLF
Trigger: AAAAAGCTGTGTGCTCTCCAAGCCCAGTTCAGCTTG...TTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CAA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGCTGTTCACATTGGCTTaGGAAAGCAGCCTCATTCTG +
Preference number: 3 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQLFTLA*ESSLIL
Trigger: CAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAG...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR TCA 72 bp GTCACCAGAAGCTTCCAAGCTCAGTTCAAGAGCCAATaGGGGCTGAGTGTGGTGCTGGAACCCGGTGTTTTG +
Preference number: 3 (lower is better)
Translates to: VTRSFQAQFKSQ*GLSVVLEPGVL
Trigger: CAAAACACCGGGTTCCAGCACCACACTCAGCCCTCATTGGCTCTTGAACTGAGCTTGGAAGCTTCTGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR TCA 72 bp AGTGCTGCAACACACACGGTGGGTAAGAACCAGAATTaGGGACAGGCCAACACTCCCAGTACAAATGGAGCC +
Preference number: 3 (lower is better)
Translates to: SAATHTVGKNQN*GQANTPSTNGA
Trigger: GGCTCCATTTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTGTTGCAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR CCA 72 bp GCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTaGAAAGCAGCCTCATTCTGGGCACCTAGTAATCCT +
Preference number: 3 (lower is better)
Translates to: ATSKSSRCSHWL*KAASFWAPSNP
Trigger: AGGATTACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CCA 72 bp CTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTaGCTTTGGAAAGCAGCCTCATTCTGGGCACCTAGT +
Preference number: 3 (lower is better)
Translates to: LKATSKSSRCSH*LWKAASFWAPS
Trigger: ACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CAA 90 bp GTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCACCATGTGGCTTGACTTaGTCAAGGGCAAAATCTGCA +
Preference number: 3 (lower is better)
Translates to: VCQTATLHSHFLQRSQGPPCGLT*SRAKSA
Trigger: TGCAGATTTTGCCCTTGACAAAGTCAAGCCACATGG...TGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CAA 90 bp CAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCCCATGCATCCCTCTCTaGCACACCTCTTTTCAAAAG +
Preference number: 3 (lower is better)
Translates to: QVQPLFTLALESSLILGTPCIPL*HTSFQK
Trigger: CTTTTGAAAAGAGGTGTGCAAGAGAGGGATGCATGG...GGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CAA 90 bp TCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCTAGTCAAGCTGAACTGGGCTaGGAGAGCACACAGCTTTTT +
Preference number: 3 (lower is better)
Translates to: SSRCSHWLWKAASFWAPSQAELG*ESTQLF
Trigger: AAAAAGCTGTGTGCTCTCCAAGCCCAGTTCAGCTTG...ACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CAA 90 bp GGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGCTCACTCTCAGGCTCTaGGAAGGTCACCAGAAGCTT +
Preference number: 3 (lower is better)
Translates to: GQANTPSTNGANRHFLTQLTLRL*EGHQKL
Trigger: AAGCTTCTGGTGACCTTCCAAGAGCCTGAGAGTGAG...CTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CAA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTTTCCCACAAGGATTaGCAGCCCTCTTCCACCTCA +
Preference number: 3 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHFSHKD*QPSSTS
Trigger: TGAGGTGGAAGAGGGCTGCAAATCCTTGTGGGAAAA...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR GCA 72 bp CAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTaGCACACTCCACAGCCATTTCCTGCAGAGATCTCA +
Preference number: 3 (lower is better)
Translates to: QVSLRVVESLPN*HTPQPFPAEIS
Trigger: TGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CAA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATCCATGTGGCTTGACTTaGTCAAGGGCAAAATCTGCA +
Preference number: 3 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHPCGLT*SRAKSA
Trigger: TGCAGATTTTGCCCTTGACAAAGTCAAGCCACATGG...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CAA 90 bp ATCTTAACCACTGAGATCTTAATCAAGAGAGTCCCAGACCACCTCCTGTGGGGCAAGTCACCATGTGGCTaGACTTTGTCAAGGGCAAAA +
Preference number: 3 (lower is better)
Translates to: ILTTEILIKRVPDHLLWGKSPCG*TLSRAK
Trigger: TTTTGCCCTTGACAAAGTCAAGCCACATGGTGACTT...GCCCCACAGGAGGTGGTCTGGGACTCTCTTGATTAAGATCTCAGTGGTTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR-3UTR CAA 90 bp ACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGATTCAATGCAGCCGCTGTTCACATaGGCTTTGGAAAGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: TNGANRHFLTQGGKGDSMQPLFT*ALESSL
Trigger: GAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTG...CATTGAATCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CAA 90 bp GGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGAAGTCACCATGTGGCTaGACTTTGTCAAGGGCAAAA +
Preference number: 3 (lower is better)
Translates to: GQANTPSTNGANRHFLTQKSPCG*TLSRAK
Trigger: TTTTGCCCTTGACAAAGTCAAGCCACATGGTGACTT...CTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
3UTR-3UTR CAA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATAACCAAGACCCTCATTaGGTAGAAAGAAAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHNQDPH*VERKAR
Trigger: CCTGGCTTTTCTTTCTACCAAATGAGGGTCTTGGTT...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTGCCGCGCTGGGCGCCTaGAGGCAGTCTCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: GGLKALIAKAGDLLARPTAALGA*RQSLCT
Trigger: CGTGCACAGAGACTGCCTGCAGGCGCCCAGCGCGGC...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTCCGCTCTTTCTCCTCTaGTGCCGCCGCCGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: GGLKALIAKAGDLLARPTPLFLL*CRRRLP
Trigger: CGGGAGACGGCGGCGGCAGCAGAGGAGAAAGAGCGG...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCAAGACGACTCGGGGCTaGTGCTGCTCTCGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: HSTAISCRDLRGQWPGCSKTTRG*CCSRGA
Trigger: GGCGCCCCGAGAGCAGCAGCAGCCCCGAGTCGTCTT...GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTCTGGTCGAAAGCCTGTaGCAGGACGCCGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GGLKALIAKAGDLLARPTLVESL*QDAVPA
Trigger: GGCAGGAACGGCGTCCTGCCACAGGCTTTCGACCAG...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTACTTCGCGCACGGGTTaGACCTTGGGCTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GGLKALIAKAGDLLARPTTSRTG*TLGSPQ
Trigger: CTGCGGAGAGCCCAAGGTCCAACCCGTGCGCGAAGT...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517402.1
CDS-3UTR CCA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGGGGTGCGTTGGCCACTaGAGCCGCCGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TLHSHFLQRSQGPVAWLQGCVGH*SRRPCP
Trigger: AGGACAAGGCCGGCGGCTCCAGTGGCCAACGCACCC...CTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCGTTGGCCGAGCTCTTaGCCAGCACGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TLHSHFLQRSQGPVAWLQRWPSS*PARRQA
Trigger: TGCCTGGCGACGTGCTGGCCAAGAGCTCGGCCAACG...CTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTGAAAGAAAAGCCAGGTaGGCTGTAGGAGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGLKALIAKAGDLLARPTERKAR*AVGGGG
Trigger: GCCACCGCCTCCTACAGCCCACCTGGCTTTTCTTTC...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCGATCTCAGGGGCCAGTaGCCTGGCTGCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HSTAISCRDLRGQWPGCSDLRGQ*PGCSLL
Trigger: CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATC...GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTTGCAGGCAGTCTCTGTaGACGAGCTCCTCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: HLREQSTLCRGFGPEWQACRQSL*TSSSAE
Trigger: CTCCGCGGAGGAGCTCGTGCACAGAGACTGCCTGCA...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTCGAGGTTTTCCGGGGTaGCGTAGGCTGTCTCGAAAA +
Preference number: 4 (lower is better)
Translates to: GGLKALIAKAGDLLARPTRGFPG*RRLSRK
Trigger: TTTTCGAGACAGCCTACGGCACCCCGGAAAACCTCG...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTAGCGCTTTTTGCGGGTaGGTTGGCCACTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: HLREQSTLCRGFGPEWQASAFCG*VGHWSR
Trigger: GCGGCTCCAGTGGCCAACGCACCCGCAAAAAGCGCT...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CTTTCCCAGATGAGATCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCGGTGGTGGTAGACGTTaGCCGAGCTCTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSQMRSPGRPGRLPLSISGGGRR*PSSWPA
Trigger: TGCTGGCCAAGAGCTCGGCCAACGTCTACCACCACC...GGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGATCTCATCTGGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGACGAGACTGCGGGGGTaGGGTGGTGGTAGACGTTGG +
Preference number: 4 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQTRLRG*GGGRRW
Trigger: CCAACGTCTACCACCACCCCACCCCCGCAGTCTCGT...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGGATCTCAGGGGCCAGTaGCCTGGCTGCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLDLRGQ*PGCSLL
Trigger: CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATC...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp TCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAACCCCTGTCCCCAAGCTaGACTGGGCTTGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SPGRPGRLPLSISLTLSKPLSPS*TGLGEH
Trigger: GTGCTCTCCAAGCCCAGTTCAGCTTGGGGACAGGGG...TTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR TCA 90 bp AGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTGGAACCAAGACCCTCGAGGCTTTGGGCCTaGGTGGCAGGCTGGAACCAA +
Preference number: 4 (lower is better)
Translates to: SPLCVEALGLSGRLEPRPSRLWA*VAGWNQ
Trigger: TTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGA...GGGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp AGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTGGAACCAAGACCCAGATTGCCGCGGGGGTaGCATTTAGTGGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPLCVEALGLSGRLEPRPRLPRG*HLVAGS
Trigger: TGAGCCCGCCACTAAATGGCACCCCCGCGGCAATCT...GGGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTACCCCTTCCTCCTaGCCCTGTCCCCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TLHSHFLQRSQGPVAWLQPTPSS*PCPQAE
Trigger: TTCAGCTTGGGGACAGGGGCAGGAGGAAGGGGTAGG...CTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGGGTGGTGGTAGACGTTaGCCGAGCTCTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLGGGRR*PSSWPA
Trigger: TGCTGGCCAAGAGCTCGGCCAACGTCTACCACCACC...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTAGGAACTCAGGGCTaGATCAGTGTGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HSTAISCRDLRGQWPGCSLGTQG*ISVVGG
Trigger: GCCACCCACCACACTGATCCAGCCCTGAGTTCCTAG...GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGGGCTTTGGGCCTGAGTaGCAGGCTGGAACCAAGACC +
Preference number: 4 (lower is better)
Translates to: TLHSHFLQRSQGPVAWLQGFGPE*QAGTKT
Trigger: GGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCC...CTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTGCAAAGGAGATTCAATaGGAGGGTGCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GGLKALIAKAGDLLARPTAKEIQ*EGAWLS
Trigger: GGAAAGCCAGGCACCCTCCCATTGAATCTCCTTTGC...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR TCA 90 bp CAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCCCTGGCTTTCCCAGATaGGATCCCCAGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QVQPLFTLALESSLILGTPGFPR*DPQAGQ
Trigger: CTGGCCGGCCTGGGGATCTCATCTGGGAAAGCCAGG...GGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAAGCCGCGCTGGGCGCCTaGAGGCAGTCTCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQAALGA*RQSLCT
Trigger: CGTGCACAGAGACTGCCTGCAGGCGCCCAGCGCGGC...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp ATTTGCAGCCCTCTTCCACCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACACCGCTCTTTCTCCTCTaGTGCCGCCGCCGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: ICSPLPPQSYLQVQPLFTPLFLL*CRRRLP
Trigger: CGGGAGACGGCGGCGGCAGCAGAGGAGAAAGAGCGG...TGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGGTGGAAGAGGGCTGCAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCAAGACGACTCGGGGCTaGTGCTGCTCTCGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PQSYLQVQPLFTLALESSKTTRG*CCSRGA
Trigger: GGCGCCCCGAGAGCAGCAGCAGCCCCGAGTCGTCTT...GCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCAGGCCCACTGCTCTaGAGCCAGACACTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: TLHSHFLQRSQGPVAWLQPGPLL*SQTLSK
Trigger: TTTGCTCAGTGTCTGGCTGCAGAGCAGTGGGCCTGG...CTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGCCAGGCCCACTGCTCTaGAGCCAGACACTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQPGPLL*SQTLSK
Trigger: TTTGCTCAGTGTCTGGCTGCAGAGCAGTGGGCCTGG...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCTTTTTGCGGGTGCGTTaGCCACTGGAGCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QVQPLFTLALESSLILGTFLRVR*PLEPPA
Trigger: GGCCGGCGGCTCCAGTGGCCAACGCACCCGCAAAAA...GGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGGGCCCAATCCCCAGTaGAGACCACACCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRGPNPQ*RPHPAR
Trigger: GCGGGCTGGGTGTGGTCTCCACTGGGGATTGGGCCC...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGCTAGGAACTCAGGGCTaGATCAGTGTGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQLGTQG*ISVVGG
Trigger: GCCACCCACCACACTGATCCAGCCCTGAGTTCCTAG...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp TCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAAGGCTTTGGGCCTGAGTaGCAGGCTGGAACCAAGACC +
Preference number: 4 (lower is better)
Translates to: SPGRPGRLPLSISLTLSKGFGPE*QAGTKT
Trigger: GGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCC...TTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp GGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATGTTGCCAGGGGCCAGTGGCCTaGCTGCAGCCTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GRPGRLPLSISLTLSKCCQGPVA*LQPLGF
Trigger: AAAGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTG...GCAACATTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR TCA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCAGTTCAAGAGCCAATaGGGGCTGAGTGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLHSHFLQRSQGPVAWLQQFKSQ*GLSVVL
Trigger: CAGCACCACACTCAGCCCTCATTGGCTCTTGAACTG...CTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCAGGACGCCGTTCCTaGCCACGGTGCTATAGAAAT +
Preference number: 4 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQAGRRS*PRCYRN
Trigger: ATTTCTATAGCACCGTGGGCAGGAACGGCGTCCTGC...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp AGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTGGAACCAAGACCCGTAGGAGTATGTCATTaGGCGCGAAGACGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SPLCVEALGLSGRLEPRPVGVCH*ARRRGL
Trigger: CAGACCCCGTCTTCGCGCCCAATGACATACTCCTAC...GGGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp ATTTGCAGCCCTCTTCCACCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACACGTTGGCCGAGCTCTTaGCCAGCACGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ICSPLPPQSYLQVQPLFTRWPSS*PARRQA
Trigger: TGCCTGGCGACGTGCTGGCCAAGAGCTCGGCCAACG...TGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGGTGGAAGAGGGCTGCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCCCAATCCCCAGTaGAGACCACACCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPPSPAAVHIGFGKQPHSGPNPQ*RPHPAR
Trigger: GCGGGCTGGGTGTGGTCTCCACTGGGGATTGGGCCC...AGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp TGCTGGCCAGGCCCACTGCTCTGCAGCCAGACACTGAGCAAATCCAAGTTTCATCCTCATAGCCAAAGCTaGGGACCTGCTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CWPGPLLCSQTLSKSKFHPHSQS*GPAGQA
Trigger: GGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGG...ATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAGAGCAGTGGGCCTGGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCGCACGGGTTGGACCTTaGGCTCTCCGCAGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: QVQPLFTLALESSLILGTARVGP*ALRSSR
Trigger: TCGGCTACTGCGGAGAGCCCAAGGTCCAACCCGTGC...GGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517402.1
CDS-3UTR TCA 90 bp ATTTGCAGCCCTCTTCCACCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACACCCCTGTCCCCAAGCTaGACTGGGCTTGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: ICSPLPPQSYLQVQPLFTPLSPS*TGLGEH
Trigger: GTGCTCTCCAAGCCCAGTTCAGCTTGGGGACAGGGG...TGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGGTGGAAGAGGGCTGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp CAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCTCGAGGCTTTGGGCCTaGGTGGCAGGCTGGAACCAA +
Preference number: 4 (lower is better)
Translates to: QVQPLFTLALESSLILGTSRLWA*VAGWNQ
Trigger: TTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGA...GGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGGTGTGGTGGAGAGTTTaGCAAACTGCCACACTCCAC +
Preference number: 4 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLVWWRV*QTATLH
Trigger: GTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACAC...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CTTTCCCAGATGAGATCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCAGTTGCCTGTATAAGTaGTGCAACACACACGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSQMRSPGRPGRLPLSISSCLYK*CNTHGG
Trigger: CCCACCGTGTGTGTTGCAGCACTTATACAGGCAACT...GGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGATCTCATCTGGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTGCTGTCTCGAAAAACTaGTCGAAAGCCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HLREQSTLCRGFGPEWQAAVSKN*SKACGR
Trigger: CCTGCCACAGGCTTTCGACCAGTTTTTCGAGACAGC...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ATCTTAACCACTGAGATCTTAATCAAGAGAGTCCCAGACCACCTCCTGTGGGGCGGGTGCGTTGGCCACTaGAGCCGCCGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ILTTEILIKRVPDHLLWGGCVGH*SRRPCP
Trigger: AGGACAAGGCCGGCGGCTCCAGTGGCCAACGCACCC...GCCCCACAGGAGGTGGTCTGGGACTCTCTTGATTAAGATCTCAGTGGTTAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATGTTGCGTCCCCAAGCTGAACTaGGCTTGGAGAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: GRPGRLPLSISLTLSKCCVPKLN*AWRAHS
Trigger: GCTGTGTGCTCTCCAAGCCCAGTTCAGCTTGGGGAC...GCAACATTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGACAGGGGCCAGTGGCCTaGCTGCAGCCTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRQGPVA*LQPLGF
Trigger: AAAGCCAAGAGGCTGCAGCCAGGCCACTGGCCCCTG...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp GTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCATGCAGGCTCCAAGAGTaGACCACCAGGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VCQTATLHSHFLQRSQGPCRLQE*TTRGPK
Trigger: TTTGGGACCCCTGGTGGTTCACTCTTGGAGCCTGCA...TGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp TCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAAGGTAAGAACCAGAATTaGGGACAGGCCAACACTCCC +
Preference number: 4 (lower is better)
Translates to: SPGRPGRLPLSISLTLSKGKNQN*GQANTP
Trigger: GGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACC...TTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp CCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCAGATTGCCGCGGGGGTaGCATTTAGTGGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PQSYLQVQPLFTLALESSRLPRG*HLVAGS
Trigger: TGAGCCCGCCACTAAATGGCACCCCCGCGGCAATCT...GCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGCGTTCCTGCCCACGGTaGTATAGAAATTGGACGAGA +
Preference number: 4 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLRSCPR*YRNWTR
Trigger: TCTCGTCCAATTTCTATAGCACCGTGGGCAGGAACG...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCCTACCCCTTCCTCCTaGCCCTGTCCCCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PQSYLQVQPLFTLALESSPTPSS*PCPQAE
Trigger: TTCAGCTTGGGGACAGGGGCAGGAGGAAGGGGTAGG...GCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ATCTTAACCACTGAGATCTTAATCAAGAGAGTCCCAGACCACCTCCTGTGGGGCTTTTTGCGGGTGCGTTaGCCACTGGAGCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ILTTEILIKRVPDHLLWGFLRVR*PLEPPA
Trigger: GGCCGGCGGCTCCAGTGGCCAACGCACCCGCAAAAA...GCCCCACAGGAGGTGGTCTGGGACTCTCTTGATTAAGATCTCAGTGGTTAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp TGCTGGCCAGGCCCACTGCTCTGCAGCCAGACACTGAGCAAATCCAAGTTTCATGTCCCCAAGCTGAACTaGGCTTGGAGAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: CWPGPLLCSQTLSKSKFHVPKLN*AWRAHS
Trigger: GCTGTGTGCTCTCCAAGCCCAGTTCAGCTTGGGGAC...ATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAGAGCAGTGGGCCTGGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTAGCCGCTGTTCACATTaGCTTTGGAAAGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HLREQSTLCRGFGPEWQASRCSH*LWKAAS
Trigger: TGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCT...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGTCACTCTCAGGCTCTTaGAAGGTCACCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQSLSGS*KVTRSF
Trigger: GAAGCTTCTGGTGACCTTCCAAGAGCCTGAGAGTGA...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGACCAGACCACCTCCTGTaGGGCTATCTCCATGCATCC +
Preference number: 4 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRPDHLL*GYLHAS
Trigger: GGATGCATGGAGATAGCCCCACAGGAGGTGGTCTGG...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAATTTACTCAGGGGTCCTaGGGGTGGGTAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQFTQGS*GWVGSQ
Trigger: CTGGGAGCCTACCCACCCCCAGGACCCCTGAGTAAA...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTAAAGCAGCCTCATTCTaGGCACCTAGTAATCCTACC +
Preference number: 4 (lower is better)
Translates to: HLREQSTLCRGFGPEWQAKAASF*APSNPT
Trigger: GGTAGGATTACTAGGTGCCCAGAATGAGGCTGCTTT...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GGGGGACTCAAGGCCCTCATAGCCAAAGCTGGGGACCTGCTGGCCAGGCCCACTGACACTGATGCCACCTaGAATCATAGATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GGLKALIAKAGDLLARPTDTDAT*NHRFLF
Trigger: GAAAAGAAATCTATGATTCCAGGTGGCATCAGTGTC...AGTGGGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGGGCCTTGAGTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGCTGGATCAGTGTGGTaGGTGGCTAGGAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRAGSVW*VARRSG
Trigger: TCCACTCCTCCTAGCCACCCACCACACTGATCCAGC...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAAGGGCTGGATCAGTGTaGTGGGTGGCTAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRRAGSV*WVARRS
Trigger: ACTCCTCCTAGCCACCCACCACACTGATCCAGCCCT...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp TCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCTAGTAGGGCTGGATCAGTGTaGTGGGTGGCTAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SSRCSHWLWKAASFWAPSRAGSV*WVARRS
Trigger: ACTCCTCCTAGCCACCCACCACACTGATCCAGCCCT...ACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATAAGCTGGGGACCTGCTaGCCAGGCCCACTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHKLGTC*PGPLLC
Trigger: GCAGAGCAGTGGGCCTGGCCAGCAGGTCCCCAGCTT...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGAGTCACCATGTGGCTTaGCTTTGTCAAGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLSHHVA*LCQGQN
Trigger: ATTTTGCCCTTGACAAAGTCAAGCCACATGGTGACT...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp AGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTGGAACCAAGACCCTCTGCAGCCAGACACTaGGCAAATCCAAGTTTCATT +
Preference number: 4 (lower is better)
Translates to: SPLCVEALGLSGRLEPRPSAARH*ANPSFI
Trigger: AATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAGA...GGGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGTCTGCAGCCAGACACTaGGCAAATCCAAGTTTCATT +
Preference number: 4 (lower is better)
Translates to: TLHSHFLQRSQGPVAWLQSAARH*ANPSFI
Trigger: AATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAGA...CTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CTGCAGCCAGACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGTGCAGGCAGTCTCTGTaGACGAGCTCCTCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: LQPDTEQIQVSLRVVESLCRQSL*TSSSAE
Trigger: CTCCGCGGAGGAGCTCGTGCACAGAGACTGCCTGCA...CAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CTGCAGCCAGACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGAGCGCTTTTTGCGGGTaGGTTGGCCACTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LQPDTEQIQVSLRVVESLSAFCG*VGHWSR
Trigger: GCGGCTCCAGTGGCCAACGCACCCGCAAAAAGCGCT...CAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCGTGGGGCTATCTCCATaGATCCCTCTCTTGCACACC +
Preference number: 4 (lower is better)
Translates to: PQSYLQVQPLFTLALESSVGLSP*IPLLHT
Trigger: GGTGTGCAAGAGAGGGATGCATGGAGATAGCCCCAC...GCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp TCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCTAGTTCCACAGCCATTTCCTaGAGAGATCTCAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSRCSHWLWKAASFWAPSSTAIS*RDLRGQ
Trigger: CTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGA...ACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATGTTGCGAAAAGAAGGGAGGCTaGAGAAATCTGGACCCGAGA +
Preference number: 4 (lower is better)
Translates to: GRPGRLPLSISLTLSKCCEKKGG*RNLDPR
Trigger: TCTCGGGTCCAGATTTCTCCAGCCTCCCTTCTTTTC...GCAACATTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGACGGTGCTATAGAAATTaGACGAGACTGCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRRCYRN*TRLRGW
Trigger: CCACCCCCGCAGTCTCGTCCAATTTCTATAGCACCG...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATGCCTTGTCCTCAGTGTaGCCGGAAGACGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHALSSV*PEDDSG
Trigger: CCCCGAGTCGTCTTCCGGCCACACTGAGGACAAGGC...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACACAGGGAGGCAAAGGAGATTCAATGGGAGGGTGCCTGGCTTTCCCAGATGAGCCCAATTCCAGCCGCTaGAGTCTTAGAGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: TQGGKGDSMGGCLAFPDEPNSSR*SLRGVD
Trigger: ATCCACTCCTCTAAGACTCCAGCGGCTGGAATTGGG...CTCATCTGGGAAAGCCAGGCACCCTCCCATTGAATCTCCTTTGCCTCCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp GTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCACCCAATTCCAGCCGCTaGAGTCTTAGAGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: VCQTATLHSHFLQRSQGPPNSSR*SLRGVD
Trigger: ATCCACTCCTCTAAGACTCCAGCGGCTGGAATTGGG...TGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ATCTTAACCACTGAGATCTTAATCAAGAGAGTCCCAGACCACCTCCTGTGGGGCTTTACTCAGGGGTCCTaGGGGTGGGTAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ILTTEILIKRVPDHLLWGFTQGS*GWVGSQ
Trigger: CTGGGAGCCTACCCACCCCCAGGACCCCTGAGTAAA...GCCCCACAGGAGGTGGTCTGGGACTCTCTTGATTAAGATCTCAGTGGTTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGTGTTCACATTGGCTTTaGAAAGCAGCCTCATTCTGG +
Preference number: 4 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQCSHWL*KAASFW
Trigger: CCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACA...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATCCTCATAGCCAAAGCTaGGGACCTGCTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHPHSQS*GPAGQA
Trigger: GGCCTGGCCAGCAGGTCCCCAGCTTTGGCTATGAGG...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCACTCCCAGTACAAATaGAGCCAACAGACATTTCTT +
Preference number: 4 (lower is better)
Translates to: HSTAISCRDLRGQWPGCSHSQYK*SQQTFL
Trigger: AAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTG...GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp CTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGCAGGACGCCGTTCCTaGCCACGGTGCTATAGAAAT +
Preference number: 4 (lower is better)
Translates to: LPPSPAAVHIGFGKQPHSAGRRS*PRCYRN
Trigger: ATTTCTATAGCACCGTGGGCAGGAACGGCGTCCTGC...AGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAATCCACAGCCATTTCCTaGAGAGATCTCAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQSTAIS*RDLRGQ
Trigger: CTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGA...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp TCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCTAGTGTGTGGTGGAGAGTTTaGCAAACTGCCACACTCCAC +
Preference number: 4 (lower is better)
Translates to: SSRCSHWLWKAASFWAPSVWWRV*QTATLH
Trigger: GTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACAC...ACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCGAGGCTGGAGAAATCTaGACCCGAGACGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: QVQPLFTLALESSLILGTEAGEI*TRDVVS
Trigger: ACTTACTACGTCTCGGGTCCAGATTTCTCCAGCCTC...GGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp GACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCGCCTTGTCCTCAGTGTaGCCGGAAGACGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: DTEQIQVSLRVVESLPNCALSSV*PEDDSG
Trigger: CCCCGAGTCGTCTTCCGGCCACACTGAGGACAAGGC...GCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAGATCAGTGTGGTGGGTaGCTAGGAGGAGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRDQCGG*LGGVER
Trigger: TCTTTCCACTCCTCCTAGCCACCCACCACACTGATC...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATGCTGGATCAGTGTGGTaGGTGGCTAGGAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHAGSVW*VARRSG
Trigger: TCCACTCCTCCTAGCCACCCACCACACTGATCCAGC...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATGAAAGAAAAGCCAGGTaGGCTGTAGGAGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHERKAR*AVGGGG
Trigger: GCCACCGCCTCCTACAGCCCACCTGGCTTTTCTTTC...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATGTTGCTTTCATTACGTGTGGTaGAGAGTTTGCCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: GRPGRLPLSISLTLSKCCFHYVW*RVCQTA
Trigger: GGCAGTTTGGCAAACTCTCCACCACACGTAATGAAA...GCAACATTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp AGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTGGAACCAAGACCCAAGTTTCATTACGTGTaGTGGAGAGTTTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: SPLCVEALGLSGRLEPRPKFHYV*WRVCQT
Trigger: AGTTTGGCAAACTCTCCACCACACGTAATGAAACTT...GGGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTAAGTTTCATTACGTGTaGTGGAGAGTTTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: HLREQSTLCRGFGPEWQAKFHYV*WRVCQT
Trigger: AGTTTGGCAAACTCTCCACCACACGTAATGAAACTT...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp ACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGATTCAATGAAGCTGGGGACCTGCTaGCCAGGCCCACTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TNGANRHFLTQGGKGDSMKLGTC*PGPLLC
Trigger: GCAGAGCAGTGGGCCTGGCCAGCAGGTCCCCAGCTT...CATTGAATCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR TCA 90 bp GACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCAATGGCGTACTCTCTaGAGGTCACTTCGCGCACGG +
Preference number: 4 (lower is better)
Translates to: DTEQIQVSLRVVESLPNCQWRTL*RSLRAR
Trigger: CCGTGCGCGAAGTGACCTTCAGAGAGTACGCCATTG...GCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp TGCTGGCCAGGCCCACTGCTCTGCAGCCAGACACTGAGCAAATCCAAGTTTCATAGTCACCATGTGGCTTaGCTTTGTCAAGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: CWPGPLLCSQTLSKSKFHSHHVA*LCQGQN
Trigger: ATTTTGCCCTTGACAAAGTCAAGCCACATGGTGACT...ATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAGAGCAGTGGGCCTGGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGAACCTGTCATTCTAGCTaGTGCACAGCTCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRTCHSS*CTALRI
Trigger: GATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGT...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp ATTTGCAGCCCTCTTCCACCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACAACCTGTCATTCTAGCTaGTGCACAGCTCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: ICSPLPPQSYLQVQPLFTTCHSS*CTALRI
Trigger: GATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGT...TGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGGTGGAAGAGGGCTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGTCTTTATTTTCCTTGTaGCCAGTTGCCTGTATAAGT +
Preference number: 4 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQSLFSL*PVACIS
Trigger: ACTTATACAGGCAACTGGGCACAAGGAAAATAAAGA...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp TCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGACCAGACCACCTCCTGTaGGGCTATCTCCATGCATCC +
Preference number: 4 (lower is better)
Translates to: SQYKWSQQTFLNTGRQRRPDHLL*GYLHAS
Trigger: GGATGCATGGAGATAGCCCCACAGGAGGTGGTCTGG...TCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp ATCTTAACCACTGAGATCTTAATCAAGAGAGTCCCAGACCACCTCCTGTGGGGCGATCAGTGTGGTGGGTaGCTAGGAGGAGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: ILTTEILIKRVPDHLLWGDQCGG*LGGVER
Trigger: TCTTTCCACTCCTCCTAGCCACCCACCACACTGATC...GCCCCACAGGAGGTGGTCTGGGACTCTCTTGATTAAGATCTCAGTGGTTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATCAATGGGAGGGTGCCTaGCTTTCCCAGATGAGATCC +
Preference number: 4 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHQWEGA*LSQMRS
Trigger: GGATCTCATCTGGGAAAGCCAGGCACCCTCCCATTG...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR TCA 90 bp GGTCCCAAACCTGTCATTCTAGCTGATGCACAGCTCTCAGAATCCAATGATTATCAATGGCGTACTCTCTaGAGGTCACTTCGCGCACGG +
Preference number: 4 (lower is better)
Translates to: GPKPVILADAQLSESNDYQWRTL*RSLRAR
Trigger: CCGTGCGCGAAGTGACCTTCAGAGAGTACGCCATTG...ATAATCATTGGATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGTTTGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp GGTCCCAAACCTGTCATTCTAGCTGATGCACAGCTCTCAGAATCCAATGATTATTGCAGGCTCCAAGAGTaGACCACCAGGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GPKPVILADAQLSESNDYCRLQE*TTRGPK
Trigger: TTTGGGACCCCTGGTGGTTCACTCTTGGAGCCTGCA...ATAATCATTGGATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGTTTGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp GACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCGAGGTTTTCCGGGGTaGCGTAGGCTGTCTCGAAAA +
Preference number: 4 (lower is better)
Translates to: DTEQIQVSLRVVESLPNCRGFPG*RRLSRK
Trigger: TTTTCGAGACAGCCTACGGCACCCCGGAAAACCTCG...GCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGGTCAAGGGCAAAATCTaGATATTATCTCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLVKGKI*ILSHVY
Trigger: ATACACATGAGATAATATGCAGATTTTGCCCTTGAC...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCGGTGCTATAGAAATTaGACGAGACTGCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: DTEQIQVSLRVVESLPNCRCYRN*TRLRGW
Trigger: CCACCCCCGCAGTCTCGTCCAATTTCTATAGCACCG...GCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAATCAAAAGTCACCATGTaGCTTGACTTTGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQSKVTM*LDFVKG
Trigger: GCCCTTGACAAAGTCAAGCCACATGGTGACTTTTGA...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAATGTTCACATTGGCTTTaGAAAGCAGCCTCATTCTGG +
Preference number: 4 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQCSHWL*KAASFW
Trigger: CCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACA...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR TCA 90 bp ACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGATTCAATGCAGTTCAAGAGCCAATaGGGGCTGAGTGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TNGANRHFLTQGGKGDSMQFKSQ*GLSVVL
Trigger: CAGCACCACACTCAGCCCTCATTGGCTCTTGAACTG...CATTGAATCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp GGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGAACATGATTCTCCACTaGAGCTGCCTCTTTGAAGCG +
Preference number: 4 (lower is better)
Translates to: GQANTPSTNGANRHFLTQNMILH*SCLFEA
Trigger: CGCTTCAAAGAGGCAGCTGCAGTGGAGAATCATGTT...CTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp CTGCAGCCAGACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGAACATGATTCTCCACTaGAGCTGCCTCTTTGAAGCG +
Preference number: 4 (lower is better)
Translates to: LQPDTEQIQVSLRVVESLNMILH*SCLFEA
Trigger: CGCTTCAAAGAGGCAGCTGCAGTGGAGAATCATGTT...CAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp AGGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACACGTTCCTGCCCACGGTaGTATAGAAATTGGACGAGA +
Preference number: 4 (lower is better)
Translates to: RTGQHSQYKWSQQTFLNTRSCPR*YRNWTR
Trigger: TCTCGTCCAATTTCTATAGCACCGTGGGCAGGAACG...TGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp CTGCAGCCAGACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGGAGAGTTTGCCAAACTaGCACACTCCACAGCCATTT +
Preference number: 4 (lower is better)
Translates to: LQPDTEQIQVSLRVVESLESLPN*HTPQPF
Trigger: AAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTC...CAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTTGTGCCCAGTTaGCTGTATAAGTGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHFLVPS*LYKCCN
Trigger: GTTGCAGCACTTATACAGGCAACTGGGCACAAGGAA...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp GGTCCCAAACCTGTCATTCTAGCTGATGCACAGCTCTCAGAATCCAATGATTATATTATTGGGCTACCTTaGGCTCTCCGCAGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: GPKPVILADAQLSESNDYIIGLP*ALRSSR
Trigger: TCGGCTACTGCGGAGAGCCCAAGGTAGCCCAATAAT...ATAATCATTGGATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGTTTGGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp GGTCCCAAACCTGTCATTCTAGCTGATGCACAGCTCTCAGAATCCAATGATTATGCTGTCTCGAAAAACTaGTCGAAAGCCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPKPVILADAQLSESNDYAVSKN*SKACGR
Trigger: CCTGCCACAGGCTTTCGACCAGTTTTTCGAGACAGC...ATAATCATTGGATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGTTTGGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp AGGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACATCACTCTCAGGCTCTTaGAAGGTCACCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RTGQHSQYKWSQQTFLNTSLSGS*KVTRSF
Trigger: GAAGCTTCTGGTGACCTTCCAAGAGCCTGAGAGTGA...TGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATCTGCAACACACACGGTaGGTAAGAACCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHLQHTR*VRTRIE
Trigger: CTCAATTCTGGTTCTTACCCACCGTGTGTGTTGCAG...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp ACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGATTCAATGATTCTCCACTGCAGCTaGCTCTTTGAAGCGGATCCG +
Preference number: 4 (lower is better)
Translates to: TNGANRHFLTQGGKGDSMILHCS*LFEADP
Trigger: CGGATCCGCTTCAAAGAGGCAGCTGCAGTGGAGAAT...CATTGAATCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp GACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCTTTCCCACAAGGATTTaGAGCCCTCTTCCACCTCAA +
Preference number: 4 (lower is better)
Translates to: DTEQIQVSLRVVESLPNCFPTRI*SPLPPQ
Trigger: TTGAGGTGGAAGAGGGCTGCAAATCCTTGTGGGAAA...GCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR GCA 90 bp TCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGAGAGAGTTTGCCAAACTaGCACACTCCACAGCCATTT +
Preference number: 4 (lower is better)
Translates to: SQYKWSQQTFLNTGRQRRESLPN*HTPQPF
Trigger: AAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTC...TCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp AGGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAAAAGCAGCCTCATTCTaGGCACCTAGTAATCCTACC +
Preference number: 4 (lower is better)
Translates to: RTGQHSQYKWSQQTFLNTKAASF*APSNPT
Trigger: GGTAGGATTACTAGGTGCCCAGAATGAGGCTGCTTT...TGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAAGACACTGATGCCACCTaGAATCATAGATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQDTDAT*NHRFLF
Trigger: GAAAAGAAATCTATGATTCCAGGTGGCATCAGTGTC...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp GGTCCCAAACCTGTCATTCTAGCTGATGCACAGCTCTCAGAATCCAATGATTATTTTCCCACAAGGATTTaGAGCCCTCTTCCACCTCAA +
Preference number: 4 (lower is better)
Translates to: GPKPVILADAQLSESNDYFPTRI*SPLPPQ
Trigger: TTGAGGTGGAAGAGGGCTGCAAATCCTTGTGGGAAA...ATAATCATTGGATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGTTTGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CCA 90 bp GACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCATCAAAATCCATTATTaGGCTACCTTGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: DTEQIQVSLRVVESLPNCIKIHY*ATLGSP
Trigger: CGGAGAGCCCAAGGTAGCCCAATAATGGATTTTGAT...GCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp CACACACGGTGGGTAAGAACCAGAATTGAGGACAGGCCAACACTCCCAGTACAAGTAGTAAGTACAACTTaGCAAATACATGTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: HTRWVRTRIEDRPTLPVQVVSTT*QIHVRG
Trigger: TCCTCTAACATGTATTTGCCAAGTTGTACTTACTAC...TTGTACTGGGAGTGTTGGCCTGTCCTCAATTCTGGTTCTTACCCACCGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CCA 90 bp GGTCCCAAACCTGTCATTCTAGCTGATGCACAGCTCTCAGAATCCAATGATTATTTTCATTACGTGTGGTaGAGAGTTTGCCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: GPKPVILADAQLSESNDYFHYVW*RVCQTA
Trigger: GGCAGTTTGGCAAACTCTCCACCACACGTAATGAAA...ATAATCATTGGATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGTTTGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR TCA 90 bp TCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGAAGGAATCTTAACCACTaGGATCTTAATCAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SQYKWSQQTFLNTGRQRRRNLNH*DLNQES
Trigger: ACTCTCTTGATTAAGATCTCAGTGGTTAAGATTCCT...TCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR GCA 90 bp CTGCAGCCAGACACTGAGCAAATCCAAGTTTCATTACGTGTGGTGGAGAGTTTGGTCAAGGGCAAAATCTaGATATTATCTCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: LQPDTEQIQVSLRVVESLVKGKI*ILSHVY
Trigger: ATACACATGAGATAATATGCAGATTTTGCCCTTGAC...CAAACTCTCCACCACACGTAATGAAACTTGGATTTGCTCAGTGTCTGGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
3UTR CAA 72 bp ACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATGTaGCAAGAGATTAAAAAGACCATTCTCAATACCTTT +
Preference number: 4 (lower is better)
Translates to: TASEHFPNSFQM*QEIKKTILNTF
Trigger: AAAGGTATTGAGAATGGTCTTTTTAATCTCTTGCAACATTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS CCA 90 bp TGGCCGAGCTCTTGGCCAGCACGTCGCCAGGCACGCCGGCCGCGCTaGGCGCCTGCAGGCAGTCTCTGTGCACGAGCTCCTCCGCGGAGT +
Preference number: 5 (lower is better)
Translates to: WPSSWPARRQARRPR*APAGSLCARAPPRS
Trigger: ACTCCGCGGAGGAGCTCGTGCACAGAGACTGCCTGCAGGCGCCCAGCGCGGCCGGCGTGCCTGGCGACGTGCTGGCCAAGAGCTCGGCCA
73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 90 bp ACGAGACTGCGGGGGTGGGGTGGTGGTAGACGTTGGCCGAGCTCTTaGCCAGCACGTCGCCAGGCACGCCGGCCGCGCTGGGCGCCTGCA +
Preference number: 5 (lower is better)
Translates to: TRLRGWGGGRRWPSS*PARRQARRPRWAPA
Trigger: TGCAGGCGCCCAGCGCGGCCGGCGTGCCTGGCGACGTGCTGGCCAAGAGCTCGGCCAACGTCTACCACCACCCCACCCCCGCAGTCTCGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS GCA 90 bp CGGCCTTGTCCTCAGTGTGGCCGGAAGACGACTCGGGGCTGCTGCTaGTCTCGGGGCGCCGCCGCCGCTCTTTCTCCTCTGCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RPCPQCGRKTTRGCC*SRGAAAALSPLLPP
Trigger: CGGCGGCAGCAGAGGAGAAAGAGCGGCGGCGGCGCCCCGAGAGCAGCAGCAGCCCCGAGTCGTCTTCCGGCCACACTGAGGACAAGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS GCA 90 bp CGCCGGCCTTGTCCTCAGTGTGGCCGGAAGACGACTCGGGGCTGCTaGTGCTCTCGGGGCGCCGCCGCCGCTCTTTCTCCTCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: RRPCPQCGRKTTRGC*CSRGAAAALSPLLP
Trigger: CGGCAGCAGAGGAGAAAGAGCGGCGGCGGCGCCCCGAGAGCAGCAGCAGCCCCGAGTCGTCTTCCGGCCACACTGAGGACAAGGCCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 90 bp TATAGAAATTGGACGAGACTGCGGGGGTGGGGTGGTGGTAGACGTTaGCCGAGCTCTTGGCCAGCACGTCGCCAGGCACGCCGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: YRNWTRLRGWGGGRR*PSSWPARRQARRPR
Trigger: GCGCGGCCGGCGTGCCTGGCGACGTGCTGGCCAAGAGCTCGGCCAACGTCTACCACCACCCCACCCCCGCAGTCTCGTCCAATTTCTATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGCTGGAGCCGCCGGCCTaGTCCTCAGTGTGGCCGGAA +
Preference number: 5 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLLEPPA*SSVWPE
Trigger: TTCCGGCCACACTGAGGACAAGGCCGGCGGCTCCAG...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTCTTTTTGCGGGTGCGTaGGCCACTGGAGCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: HLREQSTLCRGFGPEWQALFAGA*ATGAAG
Trigger: GCCGGCGGCTCCAGTGGCCAACGCACCCGCAAAAAG...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 90 bp AAGCCTGTGGCAGGACGCCGTTCCTGCCCACGGTGCTATAGAAATTaGACGAGACTGCGGGGGTGGGGTGGTGGTAGACGTTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: KPVAGRRSCPRCYRN*TRLRGWGGGRRWPS
Trigger: GCTCGGCCAACGTCTACCACCACCCCACCCCCGCAGTCTCGTCCAATTTCTATAGCACCGTGGGCAGGAACGGCGTCCTGCCACAGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp CACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTGGAACCCGGTGTTTaGGGGGACTCAAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: HSTAISCRDLRGQWPGCSLEPGV*GDSRPS
Trigger: TGAGGGCCTTGAGTCCCCCAAAACACCGGGTTCCAG...GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp TCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCTAGTACGTTGGCCGAGCTCTaGGCCAGCACGTCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: SSRCSHWLWKAASFWAPSTLAEL*ASTSPG
Trigger: GCCTGGCGACGTGCTGGCCAAGAGCTCGGCCAACGT...ACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp CCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCACGTTGGCCGAGCTCTaGGCCAGCACGTCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PQSYLQVQPLFTLALESSTLAEL*ASTSPG
Trigger: GCCTGGCGACGTGCTGGCCAAGAGCTCGGCCAACGT...GCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGACTTTTTGCGGGTGCGTaGGCCACTGGAGCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRLFAGA*ATGAAG
Trigger: GCCGGCGGCTCCAGTGGCCAACGCACCCGCAAAAAG...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp CACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCAGCCGCTGTTCACATaGGCTTTGGAAAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HSTAISCRDLRGQWPGCSQPLFT*ALESSL
Trigger: GAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTG...GCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp CTTTCCCAGATGAGATCCCCAGGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCACTGCAGCTGCCTCTTaGAAGCGGATCCGTGAAGTA +
Preference number: 5 (lower is better)
Translates to: LSQMRSPGRPGRLPLSISTAAAS*KRIREV
Trigger: TACTTCACGGATCCGCTTCAAAGAGGCAGCTGCAGT...GGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCCTGGGGATCTCATCTGGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp CCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCACTTCGCGCACGGGTaGGACCTTGGGCTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: PQSYLQVQPLFTLALESSHFAHG*DLGLSA
Trigger: TGCGGAGAGCCCAAGGTCCAACCCGTGCGCGAAGTG...GCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517402.1
CDS-3UTR CAA 90 bp ACACTCCACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCTCACTCTCAGGCTCTaGGAAGGTCACCAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: TLHSHFLQRSQGPVAWLQLTLRL*EGHQKL
Trigger: AAGCTTCTGGTGACCTTCCAAGAGCCTGAGAGTGAG...CTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGTGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGCCATGTGGCTTGACTTaGTCAAGGGCAAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLPCGLT*SRAKSA
Trigger: TGCAGATTTTGCCCTTGACAAAGTCAAGCCACATGG...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp ACAGCCATTTCCTGCAGAGATCTCAGGGGCCAGTGGCCTGGCTGCAGCCTCTTGCCATGCATCCCTCTCTaGCACACCTCTTTTCAAAAG +
Preference number: 5 (lower is better)
Translates to: TAISCRDLRGQWPGCSLLPCIPL*HTSFQK
Trigger: CTTTTGAAAAGAGGTGTGCAAGAGAGGGATGCATGG...CAAGAGGCTGCAGCCAGGCCACTGGCCCCTGAGATCTCTGCAGGAAATGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp AGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTGGAACCAAGACCCCTGTTCACATTGGCTTaGGAAAGCAGCCTCATTCTG +
Preference number: 5 (lower is better)
Translates to: SPLCVEALGLSGRLEPRPLFTLA*ESSLIL
Trigger: CAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAG...GGGTCTTGGTTCCAGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp CACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGGCTAAGTCACCATGTGGCTaGACTTTGTCAAGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: HLREQSTLCRGFGPEWQAKSPCG*TLSRAK
Trigger: TTTTGCCCTTGACAAAGTCAAGCCACATGGTGACTT...AGCCTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp GGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATGTTGCCAAGCTGAACTGGGCTaGGAGAGCACACAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: GRPGRLPLSISLTLSKCCQAELG*ESTQLF
Trigger: AAAAAGCTGTGTGCTCTCCAAGCCCAGTTCAGCTTG...GCAACATTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp CTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTCCTGGCTGCAGCCTCTaGGCTTTTCCACATCTCCCA +
Preference number: 5 (lower is better)
Translates to: LPPSPAAVHIGFGKQPHSPGCSL*AFPHLP
Trigger: TGGGAGATGTGGAAAAGCCAAGAGGCTGCAGCCAGG...AGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp ACACAGGGAGGCAAAGGAGATTCAATGGGAGGGTGCCTGGCTTTCCCAGATGAGCTCACTCTCAGGCTCTaGGAAGGTCACCAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: TQGGKGDSMGGCLAFPDELTLRL*EGHQKL
Trigger: AAGCTTCTGGTGACCTTCCAAGAGCCTGAGAGTGAG...CTCATCTGGGAAAGCCAGGCACCCTCCCATTGAATCTCCTTTGCCTCCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp ACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGATTCAATGCTGGAGCCGCCGGCCTaGTCCTCAGTGTGGCCGGAA +
Preference number: 5 (lower is better)
Translates to: TNGANRHFLTQGGKGDSMLEPPA*SSVWPE
Trigger: TTCCGGCCACACTGAGGACAAGGCCGGCGGCTCCAG...CATTGAATCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp TCCCACCTCAGGGAACAGTCCACTCTGTGTCGAGGCTTTGGGCCTGAGTGGCAGCTTAGAGGAGTGGATTaGCTGAGTAGTACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: SHLREQSTLCRGFGPEWQLRGVD*LSSTVN
Trigger: GTTTACAGTACTACTCAGCAAATCCACTCCTCTAAG...CTGCCACTCAGGCCCAAAGCCTCGACACAGAGTGGACTGTTCCCTGAGGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp CTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTCAGCCGCTGTTCACATaGGCTTTGGAAAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LPPSPAAVHIGFGKQPHSQPLFT*ALESSL
Trigger: GAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTG...AGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp CCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCAAGCTGAACTGGGCTaGGAGAGCACACAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: PQSYLQVQPLFTLALESSQAELG*ESTQLF
Trigger: AAAAAGCTGTGTGCTCTCCAAGCCCAGTTCAGCTTG...GCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp GGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATGTTGCAACCAAGACCCTCATTaGGTAGAAAGAAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GRPGRLPLSISLTLSKCCNQDPH*VERKAR
Trigger: CCTGGCTTTTCTTTCTACCAAATGAGGGTCTTGGTT...GCAACATTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp AAGTTTCATTACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATCCTGGCTGCAGCCTCTaGGCTTTTCCACATCTCCCA +
Preference number: 5 (lower is better)
Translates to: KFHYVWWRVCQTATLHSHPGCSL*AFPHLP
Trigger: TGGGAGATGTGGAAAAGCCAAGAGGCTGCAGCCAGG...ATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGTAATGAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp ATTTGCAGCCCTCTTCCACCTCAAAGCTACCTCCAAGTCCAGCCGCTGTTCACACATCAAAATCCATTATaGGGCTACCTTGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: ICSPLPPQSYLQVQPLFTHQNPL*GYLGLS
Trigger: GGAGAGCCCAAGGTAGCCCAATAATGGATTTTGATG...TGTGAACAGCGGCTGGACTTGGAGGTAGCTTTGAGGTGGAAGAGGGCTGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp GGCCGGCCAGGCCGACTGCCTCTGAGCATTTCCCTAACTCTTTCCAAATGTTGCCTTAGAGGAGTGGATTaGCTGAGTAGTACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: GRPGRLPLSISLTLSKCCLRGVD*LSSTVN
Trigger: GTTTACAGTACTACTCAGCAAATCCACTCCTCTAAG...GCAACATTTGGAAAGAGTTAGGGAAATGCTCAGAGGCAGTCGGCCTGGCCGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp ACGTGTGGTGGAGAGTTTGCCAAACTGCCACACTCCACAGCCATTTCCTGCAGACCATGTGGCTTGACTTaGTCAAGGGCAAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: TCGGEFAKLPHSTAISCRPCGLT*SRAKSA
Trigger: TGCAGATTTTGCCCTTGACAAAGTCAAGCCACATGG...TCTGCAGGAAATGGCTGTGGAGTGTGGCAGTTTGGCAAACTCTCCACCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp CTACCTCCAAGTCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTTTTTCCCACAAGGATTaGCAGCCCTCTTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: LPPSPAAVHIGFGKQPHSFSHKD*QPSSTS
Trigger: TGAGGTGGAAGAGGGCTGCAAATCCTTGTGGGAAAA...AGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGACTTGGAGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp GGTCCCAAACCTGTCATTCTAGCTGATGCACAGCTCTCAGAATCCAATGATTATCTGGAACCCGGTGTTTaGGGGGACTCAAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GPKPVILADAQLSESNDYLEPGV*GDSRPS
Trigger: TGAGGGCCTTGAGTCCCCCAAAACACCGGGTTCCAG...ATAATCATTGGATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGTTTGGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp ACACAGGGAGGCAAAGGAGATTCAATGGGAGGGTGCCTGGCTTTCCCAGATGAGCCGTCTTTATTTTCCTaGTGCCCAGTTGCCTGTATA +
Preference number: 5 (lower is better)
Translates to: TQGGKGDSMGGCLAFPDEPSLFS*CPVACI
Trigger: TATACAGGCAACTGGGCACAAGGAAAATAAAGACGG...CTCATCTGGGAAAGCCAGGCACCCTCCCATTGAATCTCCTTTGCCTCCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp TCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGGGAGGCAAAGGAGAAGTAGGAGTATGTCATaGGGCGCGAAGACGGGGTCT +
Preference number: 5 (lower is better)
Translates to: SQYKWSQQTFLNTGRQRRSRSMS*GAKTGS
Trigger: AGACCCCGTCTTCGCGCCCAATGACATACTCCTACT...TCTCCTTTGCCTCCCTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp TCCAGCCGCTGTTCACATTGGCTTTGGAAAGCAGCCTCATTCTGGGCACCTAGTAAGTCACCATGTGGCTaGACTTTGTCAAGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: SSRCSHWLWKAASFWAPSKSPCG*TLSRAK
Trigger: TTTTGCCCTTGACAAAGTCAAGCCACATGGTGACTT...ACTAGGTGCCCAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAGCGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 90 bp AGGGAGGCTGGAGAAATCTGGACCCGAGACGTAGTAAGTACAACTTaGCAAATACATGTTAGAGGAGCAGGGACCACGCTCATCAAAATC +
Preference number: 5 (lower is better)
Translates to: REAGEIWTRDVVSTT*QIHVRGAGTTLIKI
Trigger: GATTTTGATGAGCGTGGTCCCTGCTCCTCTAACATGTATTTGCCAAGTTGTACTTACTACGTCTCGGGTCCAGATTTCTCCAGCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp GGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGTTTTCCCACAAGGATTaGCAGCCCTCTTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: GQANTPSTNGANRHFLTQFSHKD*QPSSTS
Trigger: TGAGGTGGAAGAGGGCTGCAAATCCTTGTGGGAAAA...CTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp GGACAGGCCAACACTCCCAGTACAAATGGAGCCAACAGACATTTCTTAACACAGCCATGCATCCCTCTCTaGCACACCTCTTTTCAAAAG +
Preference number: 5 (lower is better)
Translates to: GQANTPSTNGANRHFLTQPCIPL*HTSFQK
Trigger: CTTTTGAAAAGAGGTGTGCAAGAGAGGGATGCATGG...CTGTGTTAAGAAATGTCTGTTGGCTCCATTTGTACTGGGAGTGTTGGCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000006015.4
CDS-3UTR CAA 90 bp GGTCCCAAACCTGTCATTCTAGCTGATGCACAGCTCTCAGAATCCAATGATTATCTGTTCACATTGGCTTaGGAAAGCAGCCTCATTCTG +
Preference number: 5 (lower is better)
Translates to: GPKPVILADAQLSESNDYLFTLA*ESSLIL
Trigger: CAGAATGAGGCTGCTTTCCAAAGCCAATGTGAACAG...ATAATCATTGGATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGTTTGGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS-3UTR CAA 90 bp GGTCCCAAACCTGTCATTCTAGCTGATGCACAGCTCTCAGAATCCAATGATTATAACCAAGACCCTCATTaGGTAGAAAGAAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GPKPVILADAQLSESNDYNQDPH*VERKAR
Trigger: CCTGGCTTTTCTTTCTACCAAATGAGGGTCTTGGTT...ATAATCATTGGATTCTGAGAGCTGTGCATCAGCTAGAATGACAGGTTTGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS GCA 72 bp AGCACGTCGCCAGGCACGCCGGCCGCGCTGGGCGCCTaGAGGCAGTCTCTGTGCACGAGCTCCTCCGCGGAG +
Preference number: 6 (lower is better)
Translates to: STSPGTPAALGA*RQSLCTSSSAE
Trigger: CTCCGCGGAGGAGCTCGTGCACAGAGACTGCCTGCAGGCGCCCAGCGCGGCCGGCGTGCCTGGCGACGTGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 72 bp CGGGGGTGGGGTGGTGGTAGACGTTGGCCGAGCTCTTaGCCAGCACGTCGCCAGGCACGCCGGCCGCGCTGG +
Preference number: 6 (lower is better)
Translates to: RGWGGGRRWPSS*PARRQARRPRW
Trigger: CCAGCGCGGCCGGCGTGCCTGGCGACGTGCTGGCCAAGAGCTCGGCCAACGTCTACCACCACCCCACCCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS GCA 72 bp CCTCAGTGTGGCCGGAAGACGACTCGGGGCTGCTGCTaGTCTCGGGGCGCCGCCGCCGCTCTTTCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: PQCGRKTTRGCC*SRGAAAALSPL
Trigger: CAGAGGAGAAAGAGCGGCGGCGGCGCCCCGAGAGCAGCAGCAGCCCCGAGTCGTCTTCCGGCCACACTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS GCA 72 bp TGTCCTCAGTGTGGCCGGAAGACGACTCGGGGCTGCTaGTGCTCTCGGGGCGCCGCCGCCGCTCTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: CPQCGRKTTRGC*CSRGAAAALSP
Trigger: AGGAGAAAGAGCGGCGGCGGCGCCCCGAGAGCAGCAGCAGCCCCGAGTCGTCTTCCGGCCACACTGAGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 72 bp TGGACGAGACTGCGGGGGTGGGGTGGTGGTAGACGTTaGCCGAGCTCTTGGCCAGCACGTCGCCAGGCACGC +
Preference number: 6 (lower is better)
Translates to: WTRLRGWGGGRR*PSSWPARRQAR
Trigger: GCGTGCCTGGCGACGTGCTGGCCAAGAGCTCGGCCAACGTCTACCACCACCCCACCCCCGCAGTCTCGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 72 bp CGTTGGCCACTGGAGCCGCCGGCCTTGTCCTCAGTGTaGCCGGAAGACGACTCGGGGCTGCTGCTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: RWPLEPPALSSV*PEDDSGLLLLS
Trigger: CGAGAGCAGCAGCAGCCCCGAGTCGTCTTCCGGCCACACTGAGGACAAGGCCGGCGGCTCCAGTGGCCAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CAA 72 bp TTTTTGCGGGTGCGTTGGCCACTGGAGCCGCCGGCCTaGTCCTCAGTGTGGCCGGAAGACGACTCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: FLRVRWPLEPPA*SSVWPEDDSGL
Trigger: CAGCCCCGAGTCGTCTTCCGGCCACACTGAGGACAAGGCCGGCGGCTCCAGTGGCCAACGCACCCGCAAAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS GCA 72 bp CGAAAGCCTGTGGCAGGACGCCGTTCCTGCCCACGGTaGTATAGAAATTGGACGAGACTGCGGGGGTGGGGT +
Preference number: 6 (lower is better)
Translates to: RKPVAGRRSCPR*YRNWTRLRGWG
Trigger: ACCCCACCCCCGCAGTCTCGTCCAATTTCTATAGCACCGTGGGCAGGAACGGCGTCCTGCCACAGGCTTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 72 bp GCAGGACGCCGTTCCTGCCCACGGTGCTATAGAAATTaGACGAGACTGCGGGGGTGGGGTGGTGGTAGACGT +
Preference number: 6 (lower is better)
Translates to: AGRRSCPRCYRN*TRLRGWGGGRR
Trigger: ACGTCTACCACCACCCCACCCCCGCAGTCTCGTCCAATTTCTATAGCACCGTGGGCAGGAACGGCGTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 72 bp CCACGGTGCTATAGAAATTGGACGAGACTGCGGGGGTaGGGTGGTGGTAGACGTTGGCCGAGCTCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: PRCYRNWTRLRG*GGGRRWPSSWP
Trigger: TGGCCAAGAGCTCGGCCAACGTCTACCACCACCCCACCCCCGCAGTCTCGTCCAATTTCTATAGCACCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000006015.4
ENST00000517402.1
CDS CCA 72 bp GGAGAAATCTGGACCCGAGACGTAGTAAGTACAACTTaGCAAATACATGTTAGAGGAGCAGGGACCACGCTC +
Preference number: 6 (lower is better)
Translates to: GEIWTRDVVSTT*QIHVRGAGTTL
Trigger: GAGCGTGGTCCCTGCTCCTCTAACATGTATTTGCCAAGTTGTACTTACTACGTCTCGGGTCCAGATTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006015.4