RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HOMER2 (Homo sapiens)

Ensembl gene IDs: ENSG00000103942

Ensembl transcript IDs: ENST00000304231.12, ENST00000450735.7, ENST00000500334.1, ENST00000558090.2, ENST00000558552.1, ENST00000558817.1, ENST00000560374.5, ENST00000561345.5, ENST00000619240.1, ENST00000619367.1

Found 446 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACTTGGGACTCTGCCGTGGTTTACGGGCTCCTGCCAGGTGCCCTaGGGGTCTCTAGGGCCCAGGAGAACACTTTGCCGCAAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: PLGTLPWFTGSCQVP*GSLGPRRTLCRKAL
Trigger: CAGAGCCTTGCGGCAAAGTGTTCTCCTGGGCCCTAGAGACCCCCAGGGCACCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp AGGCAGGCGCCTGCCCACCACCATCAAGGCTGTGCTCATGGAGCCTaGAGGCTGGAGACCAACTGCCCTCTGTGCACAGTCTTCCTGGGT +
Preference number: 1 (lower is better)
Translates to: RQAPAHHHQGCAHGA*RLETNCPLCTVFLG
Trigger: ACCCAGGAAGACTGTGCACAGAGGGCAGTTGGTCTCCAGCCTGCAGGCTCCATGAGCACAGCCTTGATGGTGGTGGGCAGGCGCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp CCAAAACATGCACCACTTGGGACTCTGCCGTGGTTTACGGGCTCCTaGCAGGTGCCCTGGGGGTCTCTAGGGCCCAGGAGAACACTTTGC +
Preference number: 1 (lower is better)
Translates to: PKHAPLGTLPWFTGS*QVPWGSLGPRRTLC
Trigger: GCAAAGTGTTCTCCTGGGCCCTAGAGACCCCCAGGGCACCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp CGCCTGCCCACCACCATCAAGGCTGTGCTCATGGAGCCTGCAGGCTaGAGACCAACTGCCCTCTGTGCACAGTCTTCCTGGGTGTTGATC +
Preference number: 1 (lower is better)
Translates to: RLPTTIKAVLMEPAG*RPTALCAQSSWVLI
Trigger: GATCAACACCCAGGAAGACTGTGCACAGAGGGCAGTTGGTCTCCAGCCTGCAGGCTCCATGAGCACAGCCTTGATGGTGGTGGGCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp AGAATGTCCCAGGTCGTCCCAAGTCTGGAGAAGTGGGGTGCACACTaGCCTCTGTCGTCGGCTGCCTATGAGAGCTCTGCCTTGTGGGGG +
Preference number: 1 (lower is better)
Translates to: RMSQVVPSLEKWGAH*PLSSAAYESSALWG
Trigger: CCCCCACAAGGCAGAGCTCTCATAGGCAGCCGACGACAGAGGCCAGTGTGCACCCCACTTCTCCAGACTTGGGACGACCTGGGACATTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp AGGTCCAGGAGACCTGGATGCAGAGTCCACGCTGCTGGTCACCGCTaGGTGACCCTGGGCGTGTCACTTTCTCTGTCTCTACTTCCCATC +
Preference number: 1 (lower is better)
Translates to: RSRRPGCRVHAAGHR*VTLGVSLSLSLLPI
Trigger: GATGGGAAGTAGAGACAGAGAAAGTGACACGCCCAGGGTCACCCAGCGGTGACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp GTGAATCATCAGTCCTGCCCATCACTCGCCAAAACATGCACCACTTaGGACTCTGCCGTGGTTTACGGGCTCCTGCCAGGTGCCCTGGGG +
Preference number: 1 (lower is better)
Translates to: VNHQSCPSLAKTCTT*DSAVVYGLLPGALG
Trigger: CCCCAGGGCACCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTGGCGAGTGATGGGCAGGACTGATGATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp TCACATCACGTCTGCCTTCTTCCCAAAGGTGCACCTGGCCACATGTaGGGTCCCACCATAACGTCCCCAGCGCGTCCTGTGGTTGGCTCT +
Preference number: 1 (lower is better)
Translates to: SHHVCLLPKGAPGHM*GPTITSPARPVVGS
Trigger: AGAGCCAACCACAGGACGCGCTGGGGACGTTATGGTGGGACCTCACATGTGGCCAGGTGCACCTTTGGGAAGAAGGCAGACGTGATGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp TGGCATGTCTCAAAAGATACTGCATCAAGGTCCAGGAGACCTGGATaGAGAGTCCACGCTGCTGGTCACCGCTGGGTGACCCTGGGCGTG +
Preference number: 1 (lower is better)
Translates to: WHVSKDTASRSRRPG*RVHAAGHRWVTLGV
Trigger: CACGCCCAGGGTCACCCAGCGGTGACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCTTGATGCAGTATCTTTTGAGACATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp TACTGCATCAAGGTCCAGGAGACCTGGATGCAGAGTCCACGCTGCTaGTCACCGCTGGGTGACCCTGGGCGTGTCACTTTCTCTGTCTCT +
Preference number: 1 (lower is better)
Translates to: YCIKVQETWMQSPRC*SPLGDPGRVTFSVS
Trigger: AGAGACAGAGAAAGTGACACGCCCAGGGTCACCCAGCGGTGACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCTTGATGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp TCTTCCTGGGTGTTGATCAGGTCCCGTTCAAGCTGCTCCCACCACTaGGCAAGGCTGCTCCCTCCCCAGAAAGCCAGAAAGGAGTGCATC +
Preference number: 1 (lower is better)
Translates to: SSWVLIRSRSSCSHH*ARLLPPQKARKECI
Trigger: GATGCACTCCTTTCTGGCTTTCTGGGGAGGGAGCAGCCTTGCTCAGTGGTGGGAGCAGCTTGAACGGGACCTGATCAACACCCAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp CCGTGGGCTCCTCCTGGGGTCAGCGATCCTGAAGCCTGGTATTCATaGGGTCTTCAGAATGTCCCAGGTCGTCCCAAGTCTGGAGAAGTG +
Preference number: 1 (lower is better)
Translates to: PWAPPGVSDPEAWYS*GLQNVPGRPKSGEV
Trigger: CACTTCTCCAGACTTGGGACGACCTGGGACATTCTGAAGACCTCATGAATACCAGGCTTCAGGATCGCTGACCCCAGGAGGAGCCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp GGTACACTTAGAGCCACCGTGGGCTCCTCCTGGGGTCAGCGATCCTaGAGCCTGGTATTCATGAGGTCTTCAGAATGTCCCAGGTCGTCC +
Preference number: 1 (lower is better)
Translates to: GTLRATVGSSWGQRS*SLVFMRSSECPRSS
Trigger: GGACGACCTGGGACATTCTGAAGACCTCATGAATACCAGGCTTCAGGATCGCTGACCCCAGGAGGAGCCCACGGTGGCTCTAAGTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp AGAGTGGCATGTCTCAAAAGATACTGCATCAAGGTCCAGGAGACCTaGATGCAGAGTCCACGCTGCTGGTCACCGCTGGGTGACCCTGGG +
Preference number: 1 (lower is better)
Translates to: RVACLKRYCIKVQET*MQSPRCWSPLGDPG
Trigger: CCCAGGGTCACCCAGCGGTGACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCTTGATGCAGTATCTTTTGAGACATGCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp CTCTGGCAGCTCTGCATTAAAGGAATACGAAAACGGAGGAGATCCTaGAGGGTACGGGAACAGGGTAGGCATGGGCCGGTCAGAGCAGCG +
Preference number: 1 (lower is better)
Translates to: LWQLCIKGIRKRRRS*RVREQGRHGPVRAA
Trigger: CGCTGCTCTGACCGGCCCATGCCTACCCTGTTCCCGTACCCTCCAGGATCTCCTCCGTTTTCGTATTCCTTTAATGCAGAGCTGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp CATGAGGTCTTCAGAATGTCCCAGGTCGTCCCAAGTCTGGAGAAGTaGGGTGCACACTGGCCTCTGTCGTCGGCTGCCTATGAGAGCTCT +
Preference number: 1 (lower is better)
Translates to: HEVFRMSQVVPSLEK*GAHWPLSSAAYESS
Trigger: AGAGCTCTCATAGGCAGCCGACGACAGAGGCCAGTGTGCACCCCACTTCTCCAGACTTGGGACGACCTGGGACATTCTGAAGACCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp CTCACAGCTGTGAATCATCAGTCCTGCCCATCACTCGCCAAAACATaGACCACTTGGGACTCTGCCGTGGTTTACGGGCTCCTGCCAGGT +
Preference number: 1 (lower is better)
Translates to: LTAVNHQSCPSLAKT*TTWDSAVVYGLLPG
Trigger: ACCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTGGCGAGTGATGGGCAGGACTGATGATTCACAGCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp CTGGTATTCATGAGGTCTTCAGAATGTCCCAGGTCGTCCCAAGTCTaGAGAAGTGGGGTGCACACTGGCCTCTGTCGTCGGCTGCCTATG +
Preference number: 1 (lower is better)
Translates to: LVFMRSSECPRSSQV*RSGVHTGLCRRLPM
Trigger: CATAGGCAGCCGACGACAGAGGCCAGTGTGCACCCCACTTCTCCAGACTTGGGACGACCTGGGACATTCTGAAGACCTCATGAATACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp GTACGGGAACAGGGTAGGCATGGGCCGGTCAGAGCAGCGGTAGAGTaGAGAGATGACATGGCAAGATGGAGAAGCACAAGACTGTGTAAC +
Preference number: 1 (lower is better)
Translates to: VREQGRHGPVRAAVE*RDDMARWRSTRLCN
Trigger: GTTACACAGTCTTGTGCTTCTCCATCTTGCCATGTCATCTCTTCACTCTACCGCTGCTCTGACCGGCCCATGCCTACCCTGTTCCCGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp TGGCTACAGGGAGGGCCCAGGCAGGCAGAGCCAAGTACAGCTTCATaGAGATTCCTACAGCACAGAACAGCTAATTCCTATGTCCCAAGC +
Preference number: 1 (lower is better)
Translates to: WLQGGPRQAEPSTAS*RFLQHRTANSYVPS
Trigger: GCTTGGGACATAGGAATTAGCTGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGGCCCTCCCTGTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp CACAAGCGGCTGCGATGCTCACGAGTGAATGGCTTACATTCTGCCTaGGTCTGGCGTAAGGTTATGACAACAGTACTGAGACTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: HKRLRCSRVNGLHSA*VWRKVMTTVLRLGW
Trigger: CCAGCCCAGTCTCAGTACTGTTGTCATAACCTTACGCCAGACTCAGGCAGAATGTAAGCCATTCACTCGTGAGCATCGCAGCCGCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp AGGGCTGTGTTCTCTTCTAAAGGCTCCGGGGAGAAGCCATTTCCTTaGCCTTTCTGGTTTCTAGAGGTTGCCCCTGTTCCTTGGCTTGTG +
Preference number: 1 (lower is better)
Translates to: RAVFSSKGSGEKPFP*PFWFLEVAPVPWLV
Trigger: CACAAGCCAAGGAACAGGGGCAACCTCTAGAAACCAGAAAGGGCAAGGAAATGGCTTCTCCCCGGAGCCTTTAGAAGAGAACACAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp CCACATGTGAGGTCCCACCATAACGTCCCCAGCGCGTCCTGTGGTTaGCTCTCATCCAAAATTGTCCCTGGTTTCTATAGAGAAGGAGAC +
Preference number: 1 (lower is better)
Translates to: PHVRSHHNVPSASCG*LSSKIVPGFYREGD
Trigger: GTCTCCTTCTCTATAGAAACCAGGGACAATTTTGGATGAGAGCCAACCACAGGACGCGCTGGGGACGTTATGGTGGGACCTCACATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp GCTGAGTTCCATGAACGCCTGCAATGGAGCAGCTCACCCCTCCACTaGAACAGAGCAGATCTGGGGAAAGTAATAGTCTTCTTACTGTGG +
Preference number: 1 (lower is better)
Translates to: AEFHERLQWSSSPLH*NRADLGKVIVFLLW
Trigger: CCACAGTAAGAAGACTATTACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAGGCGTTCATGGAACTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp GTTCGAGGTCTTGTGTGGATACTGGTTCTCTTTCCCTCCAAGGCCTaGCCATACTGTCCCAACCTGTTGCTCTGGTGGTTTTACATTCCC +
Preference number: 1 (lower is better)
Translates to: VRGLVWILVLFPSKA*PYCPNLLLWWFYIP
Trigger: GGGAATGTAAAACCACCAGAGCAACAGGTTGGGACAGTATGGTCAGGCCTTGGAGGGAAAGAGAACCAGTATCCACACAAGACCTCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp AGAATTAGTCATAGGACCCTGAATGAGTACAAGGGGGATGGAGGGTaGAGTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAG +
Preference number: 1 (lower is better)
Translates to: RISHRTLNEYKGDGG*SPVCLRRKGAADRE
Trigger: CTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGACTTCACCCTCCATCCCCCTTGTACTCATTCAGGGTCCTATGACTAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp GGAGGCATATTCACTGTATTACGCTCCACCCTTTACTTGATGTTTTaGATCAAATGTAGTCCACAGCAGGCAGGCGCCTGCCCACCACCA +
Preference number: 1 (lower is better)
Translates to: GGIFTVLRSTLYLMF*IKCSPQQAGACPPP
Trigger: TGGTGGTGGGCAGGCGCCTGCCTGCTGTGGACTACATTTGATGCAAAACATCAAGTAAAGGGTGGAGCGTAATACAGTGAATATGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp AACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGGTCTTaGCTCCCGTGCAAACACACATTGGGCTTATCTAGCAGTCCCTTC +
Preference number: 1 (lower is better)
Translates to: NSIGGSHRIISTQWS*LPCKHTLGLSSSPF
Trigger: GAAGGGACTGCTAGATAAGCCCAATGTGTGTTTGCACGGGAGTCAAGACCACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp TGCCCCAGCCCCCACTTCCACTTATGCTTTGGTTCAGGAGTAGCCTaGAAGGACATTAGCCTACTTAGGGAGATCAAGAACTTCCAAAGT +
Preference number: 1 (lower is better)
Translates to: CPSPHFHLCFGSGVA*KDISLLREIKNFQS
Trigger: ACTTTGGAAGTTCTTGATCTCCCTAAGTAGGCTAATGTCCTTGCAGGCTACTCCTGAACCAAAGCATAAGTGGAAGTGGGGGCTGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp CTTCTCAGAAGGCTAGTCCCCACAGAAGAAAAGTGCCTCATAGGTTaGCTTTGTGTGGGCCCTACTGAGGCAGAATATGACCAGATGAAG +
Preference number: 1 (lower is better)
Translates to: LLRRLVPTEEKCLIG*LCVGPTEAEYDQMK
Trigger: CTTCATCTGGTCATATTCTGCCTCAGTAGGGCCCACACAAAGGCAACCTATGAGGCACTTTTCTTCTGTGGGGACTAGCCTTCTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp ACATTCTCCTGCCTTCTCAGAAGGCTAGTCCCCACAGAAGAAAAGTaGCTCATAGGTTGCCTTTGTGTGGGCCCTACTGAGGCAGAATAT +
Preference number: 1 (lower is better)
Translates to: TFSCLLRRLVPTEEK*LIGCLCVGPTEAEY
Trigger: ATATTCTGCCTCAGTAGGGCCCACACAAAGGCAACCTATGAGGCACTTTTCTTCTGTGGGGACTAGCCTTCTGAGAAGGCAGGAGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp AAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTGTCTaGAGCTTCATGTGTCACCTGTGCTCACATTTCATTGGCCAGAAT +
Preference number: 1 (lower is better)
Translates to: KADTAELLMGISVSV*SFMCHLCSHFIGQN
Trigger: ATTCTGGCCAATGAAATGTGAGCACAGGTGACACATGAAGCTCCAGACAGACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp TGTTTCTGGGAGGCATATTCACTGTATTACGCTCCACCCTTTACTTaGTGTTTTGCATCAAATGTAGTCCACAGCAGGCAGGCGCCTGCC +
Preference number: 1 (lower is better)
Translates to: CFWEAYSLYYAPPFT*CFASNVVHSRQAPA
Trigger: GGCAGGCGCCTGCCTGCTGTGGACTACATTTGATGCAAAACATCAAGTAAAGGGTGGAGCGTAATACAGTGAATATGCCTCCCAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp TCACCTGTGCTCACATTTCATTGGCCAGAATTAGTCATAGGACCCTaGATGAGTACAAGGGGGATGGAGGGTGAAGTCCTGTATGCCTCA +
Preference number: 1 (lower is better)
Translates to: SPVLTFHWPELVIGP*MSTRGMEGEVLYAS
Trigger: TGAGGCATACAGGACTTCACCCTCCATCCCCCTTGTACTCATTCAGGGTCCTATGACTAATTCTGGCCAATGAAATGTGAGCACAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp CCGGGCGGCACTAGGAAGGCTTCCTCGCCACTCCCAACTTTAAAATaGATCCAGCTGGGTCTTGACTGGAATGAAAGGTTATTTTTAAAG +
Preference number: 1 (lower is better)
Translates to: PGGTRKASSPLPTLK*IQLGLDWNERLFLK
Trigger: CTTTAAAAATAACCTTTCATTCCAGTCAAGACCCAGCTGGATGCATTTTAAAGTTGGGAGTGGCGAGGAAGCCTTCCTAGTGCCGCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp GAATTATTTTCTCTTGGCACCCACGGGTCACCAAAGGGACTAGAGTaGCATGTCTCAAAAGATACTGCATCAAGGTCCAGGAGACCTGGA +
Preference number: 1 (lower is better)
Translates to: ELFSLGTHGSPKGLE*HVSKDTASRSRRPG
Trigger: TCCAGGTCTCCTGGACCTTGATGCAGTATCTTTTGAGACATGCCACTCTAGTCCCTTTGGTGACCCGTGGGTGCCAAGAGAAAATAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp ACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCCTCTTTTaGGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAG +
Preference number: 1 (lower is better)
Translates to: TIHFWILAKTSGCLF*VPVLSHITSAFFPK
Trigger: CTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAGAGGCAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp GGGATTCACCACTCCTACACATTTGGGAAAAGCCGGTTCTGTGTTTaGTACAGACTTTGCCATGTGAATAGCCTGTTCCAACAGCTCTGG +
Preference number: 1 (lower is better)
Translates to: GIHHSYTFGKSRFCV*YRLCHVNSLFQQLW
Trigger: CCAGAGCTGTTGGAACAGGCTATTCACATGGCAAAGTCTGTATCAAACACAGAACCGGCTTTTCCCAAATGTGTAGGAGTGGTGAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp CATAATAAAGAGTTCACAGCACACTCAAGGCCAGGGTGCTTATCCTaGCACCCAACAGAAGGGCTACTAGGTGTATGGCAAAAATGGGAT +
Preference number: 1 (lower is better)
Translates to: HNKEFTAHSRPGCLS*HPTEGLLGVWQKWD
Trigger: ATCCCATTTTTGCCATACACCTAGTAGCCCTTCTGTTGGGTGCCAGGATAAGCACCCTGGCCTTGAGTGTGCTGTGAACTCTTTATTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp CACTGGAACAGAGCAGATCTGGGGAAAGTAATAGTCTTCTTACTGTaGTGTTCCCAGGGCCTGGGCATGAGGGTGCACAATAAATATTTG +
Preference number: 1 (lower is better)
Translates to: HWNRADLGKVIVFLL*CSQGLGMRVHNKYL
Trigger: CAAATATTTATTGTGCACCCTCATGCCCAGGCCCTGGGAACACCACAGTAAGAAGACTATTACTTTCCCCAGATCTGCTCTGTTCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp GAACTCTGTTTCCATTCCTGCGATCTCAGGGCCTCCCACTTGTTTTaGACATACTGCTCTGCCTCCACTAAAGCCATCAATAAAGAACTC +
Preference number: 1 (lower is better)
Translates to: ELCFHSCDLRASHLF*TYCSASTKAINKEL
Trigger: GAGTTCTTTATTGATGGCTTTAGTGGAGGCAGAGCAGTATGTTCAAAACAAGTGGGAGGCCCTGAGATCGCAGGAATGGAAACAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 90 bp GATGACATGGCAAGATGGAGAAGCACAAGACTGTGTAACCTACTGTaGAATAAGCAAGAGAAAGGGCACAGAGATGGTAACAACTCTGGC +
Preference number: 1 (lower is better)
Translates to: DDMARWRSTRLCNLL*NKQEKGHRDGNNSG
Trigger: GCCAGAGTTGTTACCATCTCTGTGCCCTTTCTCTTGCTTATTGCACAGTAGGTTACACAGTCTTGTGCTTCTCCATCTTGCCATGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp ACTCCAGTGTTAAAGAGGAAGCAGTACACACTCACACACTGTGGGTaGGAGTATAATTGGGTCTGTCTTTCTGGAAGGCAATTTGAGGCA +
Preference number: 1 (lower is better)
Translates to: TPVLKRKQYTLTHCG*EYNWVCLSGRQFEA
Trigger: TGCCTCAAATTGCCTTCCAGAAAGACAGACCCAATTATACTCCCACCCACAGTGTGTGAGTGTGTACTGCTTCCTCTTTAACACTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp ATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTaGCTGCCTCTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGC +
Preference number: 1 (lower is better)
Translates to: MNGTNNPLLDISKDQ*LPLLSACAKSHHVC
Trigger: GCAGACGTGATGTGACTTAGCACAGGCACTCAAAAGAGGCAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp AACACTTTGCCGCAAGGCTCTGCACCGTCAAAGAGAGTAGGGCACTaGACAATTCCACTTCAAACAAAAGATCCACAAACTTCTGGTAAA +
Preference number: 1 (lower is better)
Translates to: NTLPQGSAPSKRVGH*TIPLQTKDPQTSGK
Trigger: TTTACCAGAAGTTTGTGGATCTTTTGTTTGAAGTGGAATTGTTCAGTGCCCTACTCTCTTTGACGGTGCAGAGCCTTGCGGCAAAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 90 bp TCTTTGGGGACCATTATTCTGTCTAGTAAAAGGAGCTTTCTAGAATaGAGATTTCCAGGCCCAGAATGCAAGGGTCCTCATCCAGGTTTT +
Preference number: 1 (lower is better)
Translates to: SLGTIILSSKRSFLE*RFPGPECKGPHPGF
Trigger: AAAACCTGGATGAGGACCCTTGCATTCTGGGCCTGGAAATCTTCATTCTAGAAAGCTCCTTTTACTAGACAGAATAATGGTCCCCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 90 bp AAGAGGAAGCAGTACACACTCACACACTGTGGGTGGGAGTATAATTaGGTCTGTCTTTCTGGAAGGCAATTTGAGGCAATACATATTACA +
Preference number: 1 (lower is better)
Translates to: KRKQYTLTHCGWEYN*VCLSGRQFEAIHIT
Trigger: TGTAATATGTATTGCCTCAAATTGCCTTCCAGAAAGACAGACCCAATTATACTCCCACCCACAGTGTGTGAGTGTGTACTGCTTCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACAGCAGGCAGGCGCCTaGCCACCACCATCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVQQAGA*PPPSRL
Trigger: CAGCCTTGATGGTGGTGGGCAGGCGCCTGCCTGCTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 90 bp TGTGAATCATCAGTCCTGCCCATCACTCGCCAAAACATGCACCACTaGGGACTCTGCCGTGGTTTACGGGCTCCTGCCAGGTGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: CESSVLPITRQNMHH*GLCRGLRAPARCPG
Trigger: CCCAGGGCACCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTGGCGAGTGATGGGCAGGACTGATGATTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACGAACACCGTCCAGGTTaGTCCAGGGCCAGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: DNSTETGLDVRINEGTSHEHRPG*SRARAG
Trigger: CCCCGCCCTGGCCCTGGAGCAACCTGGACGGTGTTC...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACTTGGGACTCTGCCGTaGTTTACGGGCTCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVLGTLP*FTGSCQ
Trigger: CTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTTTCCCTCCAAGGCCTaGCCATACTGTCCCAACCTG +
Preference number: 2 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVFPSKA*PYCPNL
Trigger: CAGGTTGGGACAGTATGGTCAGGCCTTGGAGGGAAA...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGAGCTGCTCCCACCACTaGGCAAGGCTGCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVSCSHH*ARLLPP
Trigger: GGGAGGGAGCAGCCTTGCTCAGTGGTGGGAGCAGCT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACAGGTGAGGGTAACATaGAGGGAGAAGGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVQVRVT*REKGAA
Trigger: AGCAGCCCCCTTCTCCCTTCATGTTACCCTCACCTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAGGCAGGAGGATCATTTaGGCCCAGGAGTCAGGACCA +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVGRRII*AQESGP
Trigger: TGGTCCTGACTCCTGGGCTCAAATGATCCTCCTGCC...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTATCCAGGAGACCTGGATaGAGAGTCCACGCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVSRRPG*RVHAAG
Trigger: ACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGA...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAACCACTGAGCAAGGCTaGTCCCTCCCCAGAAAGCCA +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVTTEQG*SLPRKP
Trigger: TGGCTTTCTGGGGAGGGAGCAGCCTTGCTCAGTGGT...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTATGTGCTCATGGAGCCTaGAGGCTGGAGACCAACTGC +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVCAHGA*RLETNC
Trigger: GCAGTTGGTCTCCAGCCTGCAGGCTCCATGAGCACA...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCACAGCCTCACAGCTGTaGATCATCAGTCCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVTASQL*IISPAH
Trigger: ATGGGCAGGACTGATGATTCACAGCTGTGAGGCTGT...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGTGGTTTACGGGCTCCTaGCAGGTGCCCTGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVWFTGS*QVPWGS
Trigger: AGACCCCCAGGGCACCTGGCAGGAGCCCGTAAACCA...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCTGAGATCACGCCACTaGACTCCAGCCTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVLRSRH*TPAWGP
Trigger: TGGCCCCCAGGCTGGAGTGCAGTGGCGTGATCTCAG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGCTCACTGCAACCTCTaGCTCCTGGGTTCACTGCCT +
Preference number: 2 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTAHCNL*LLGSLP
Trigger: AGGCAGTGAACCCAGGAGGCAGAGGTTGCAGTGAGC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACTCAAGCAATCTTCCTaGCTCCGCCTCCAGAAGTGC +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVLKQSS*LRLQKC
Trigger: GCACTTCTGGAGGCGGAGGCAGGAAGATTGCTTGAG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACACTCCGTTGCCCAGGCTaGTGCTATCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTLRCPG*CYLSSL
Trigger: CAGTGAGCTGAGATAGCACCAGCCTGGGCAACGGAG...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAGGTGGGGGCTGTGTATaGTGGCTTGCACCTGTGATT +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVGGGCV*WLAPVI
Trigger: AATCACAGGTGCAAGCCACCATACACAGCCCCCACC...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAAGTGGCTGCCTCTTTTaGGTGCCTGTGCTAAGTCAC +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVSGCLF*VPVLSH
Trigger: GTGACTTAGCACAGGCACTCAAAAGAGGCAGCCACT...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGCCCAACCTGTTGCTCTaGTGGTTTTACATTCCCCGG +
Preference number: 2 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLPNLLL*WFYIPR
Trigger: CCGGGGAATGTAAAACCACCAGAGCAACAGGTTGGG...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACACCTTGCCATCAGAATTaGGAAGACCTCGCCGGGCTT +
Preference number: 2 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTPCHQN*EDLAGL
Trigger: AAGCCCGGCGAGGTCTTCCCAATTCTGATGGCAAGG...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACAGGGTCCTAGGACCTaGTCTGTCTATGCTTTAGGA +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVQGPRT*SVYALG
Trigger: TCCTAAAGCATAGACAGATCAGGTCCTAGGACCCTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGCAGGTGACAGTCTCTaGCCTGTTCTCTCACCCAAT +
Preference number: 2 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTAGDSL*PVLSPN
Trigger: ATTGGGTGAGAGAACAGGGCAGAGACTGTCACCTGC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACCACCATCAAGGCTGTaGTCATGGAGCCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAPPSRL*SWSLQA
Trigger: AGCCTGCAGGCTCCATGAGCACAGCCTTGATGGTGG...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAAAGTGCCTCATAGGTTaGCTTTGTGTGGGCCCTACT +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVKCLIG*LCVGPT
Trigger: AGTAGGGCCCACACAAAGGCAACCTATGAGGCACTT...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCATTAGCAAAGACCAGTaGCTGCCTCTTTTGAGTGCC +
Preference number: 2 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVISKDQ*LPLLSA
Trigger: GGCACTCAAAAGAGGCAGCCACTGGTCTTTGCTAAT...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGTGATTCTGGCATTGTaGAAGGCCAAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTVILAL*KAKAGG
Trigger: TCCTCCTGCCTTGGCCTTCCACAATGCCAGAATCAC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGACTCCTGATCTCAGGTaGTCCATCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVTPDLR*SIHLGL
Trigger: GAGGCCAAGGTGGATGGATCACCTGAGATCAGGAGT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGGGTGGCTTGCACCTGTaGTTCTGGCATTGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVGGLHL*FWHCGR
Trigger: CCTTCCACAATGCCAGAATCACAGGTGCAAGCCACC...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAAGCCGGTTCTGTGTTTaGTACAGACTTTGCCATGTG +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVSRFCV*YRLCHV
Trigger: CACATGGCAAAGTCTGTATCAAACACAGAACCGGCT...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGAGGCTGGAGACCAACTaGCCTCTGTGCACAGTCTTC +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVRLETN*PLCTVF
Trigger: GAAGACTGTGCACAGAGGGCAGTTGGTCTCCAGCCT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCCTTCTTCCCAAAGGTaGACCTGGCCACATGTGAGG +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVPSSQR*TWPHVR
Trigger: CCTCACATGTGGCCAGGTGCACCTTTGGGAAGAAGG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTCCCACTTCCCCTTTTaGTGTTTCTTCACACACACA +
Preference number: 2 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVSHFPF*CFFTHT
Trigger: TGTGTGTGTGAAGAAACAGCAAAAGGGGAAGTGGGA...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAAAAACATGCACCACTTaGGACTCTGCCGTGGTTTAC +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVKTCTT*DSAVVY
Trigger: GTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTT...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAGGGTGGGAGTATAATTaGGTCTGTCTTTCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVGWEYN*VCLSGR
Trigger: CCTTCCAGAAAGACAGACCCAATTATACTCCCACCC...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 90 bp GGTATAGCAGCCAGTCTTGGAAACACCAAAATCAGGAGACCTCAATaGCAAACTGAAAATGCAGTCCTGGCCCTGCAGCTTCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: GIAASLGNTKIRRPQ*QTENAVLALQLPGS
Trigger: GCTGCCTGGAAGCTGCAGGGCCAGGACTGCATTTTCAGTTTGCAATTGAGGTCTCCTGATTTTGGTGTTTCCAAGACTGGCTGCTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCACAAGCGGCTGCGATaGTCACGAGTGAATGGCTTA +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVHKRLR*SRVNGL
Trigger: TAAGCCATTCACTCGTGAGCATCGCAGCCGCTTGTG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTATCTCTACTTCCCATCTaGAAAATGCAGGTGACAGTC +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVSLLPI*KMQVTV
Trigger: GACTGTCACCTGCATTTTGCAGATGGGAAGTAGAGA...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGAGGAGTCCCTCTCCATaGCAAAACCCCCATCATCTC +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVRSPSP*QNPHHL
Trigger: GAGATGATGGGGGTTTTGGCATGGAGAGGGACTCCT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAGCCTCCTGGGTTCACTaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEASWVH*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGTGAACCCAGGAGGC...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCCCAAAGGGACTAGAGTaGCATGTCTCAAAAGATACT +
Preference number: 2 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVPKGLE*HVSKDT
Trigger: AGTATCTTTTGAGACATGCCACTCTAGTCCCTTTGG...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAATTTCAGTGTCTGTCTaGAGCTTCATGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVISVSV*SFMCHL
Trigger: CAGGTGACACATGAAGCTCCAGACAGACACTGAAAT...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACACTGATTGTGAACTCCTaGGCTCAAGCAATCTTCCTG +
Preference number: 2 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTLIVNS*AQAIFL
Trigger: CAGGAAGATTGCTTGAGCCCAGGAGTTCACAATCAG...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATACTGGTCACCGCTGGGTaGCCCTGGGCGTGTCACTTT +
Preference number: 2 (lower is better)
Translates to: SASTKAINKELRVCLFSILVTAG*PWACHF
Trigger: AAAGTGACACGCCCAGGGTCACCCAGCGGTGACCAG...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCGCTCCACCCTTTACTTaGTGTTTTGCATCAAATGTA +
Preference number: 2 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVAPPFT*CFASNV
Trigger: TACATTTGATGCAAAACATCAAGTAAAGGGTGGAGC...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCTTTTACTCTTGAGCTaGGGGCTGGGATTCACCACT +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVLLLLS*GLGFTT
Trigger: AGTGGTGAATCCCAGCCCTCAGCTCAAGAGTAAAAG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTATATTTCTTTTACTCTTaGGCTGAGGGCTGGGATTCA +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVYFFYS*AEGWDS
Trigger: TGAATCCCAGCCCTCAGCTCAAGAGTAAAAGAAATA...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTATCAGGAGACCTCAATTaGAAACTGAAAATGCAGTCC +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVSGDLN*KLKMQS
Trigger: GGACTGCATTTTCAGTTTGCAATTGAGGTCTCCTGA...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAATGGAGCCTGCAGGCTaGAGACCAACTGCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEMEPAG*RPTALC
Trigger: ACAGAGGGCAGTTGGTCTCCAGCCTGCAGGCTCCAT...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCAAGCGCGTCCTGTGGTTaGCTCTCATCCAAAATTGTC +
Preference number: 2 (lower is better)
Translates to: LLSACAKSHHVCLLPKGASASCG*LSSKIV
Trigger: GACAATTTTGGATGAGAGCCAACCACAGGACGCGCT...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCGATGTCTCAAGGCAATaGAAGAATTTAGCTTCTAGA +
Preference number: 2 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVDVSRQ*KNLASR
Trigger: TCTAGAAGCTAAATTCTTTCATTGCCTTGAGACATC...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACGCTGCTCTCACAACTaGCGTAAAGTCGGGACTTCC +
Preference number: 2 (lower is better)
Translates to: TNENKKGKHTQHGNEEAERCSHN*RKVGTS
Trigger: GGAAGTCCCGACTTTACGTCAGTTGTGAGAGCAGCG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTATCTTATCTGGTGGAATaGGTCTCTGAGATTAGCTTT +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVSYLVE*VSEISF
Trigger: AAAGCTAATCTCAGAGACTCATTCCACCAGATAAGA...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACTCTGTTTCCATTCCTaGGATCTCAGGGCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: TNENKKGKHTQHGNEEAELCFHS*DLRASH
Trigger: GTGGGAGGCCCTGAGATCGCAGGAATGGAAACAGAG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGGTGAATCATCAGTCCTaGCCATCACTCGCCAAAACA +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVVNHQS*PSLAKT
Trigger: TGTTTTGGCGAGTGATGGGCAGGACTGATGATTCAC...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCTGTGTATGGTGGCTTaGACCTGTGATTCTGGCATT +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVLCMVA*TCDSGI
Trigger: AATGCCAGAATCACAGGTGCAAGCCACCATACACAG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCAGTCTTGTGTGGATACTaGTTCTCTTTCCCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAVLCGY*FSFPPR
Trigger: CCTTGGAGGGAAAGAGAACCAGTATCCACACAAGAC...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAAGAATTATTTTCTCTTaGCACCCACGGGTCACCAAA +
Preference number: 2 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTRIIFS*HPRVTK
Trigger: TTTGGTGACCCGTGGGTGCCAAGAGAAAATAATTCT...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGTCCCAAAGGTGCACCTaGCCACATGTGAGGTCCCAC +
Preference number: 2 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLSQRCT*PHVRSH
Trigger: GTGGGACCTCACATGTGGCCAGGTGCACCTTTGGGA...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCCACTCCTACACATTTaGGAAAAGCCGGTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVPLLHI*EKPVLC
Trigger: ACACAGAACCGGCTTTTCCCAAATGTGTAGGAGTGG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCGTGCAAACACACATTaGGCTTATCTAGCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVRANTH*AYLAVP
Trigger: AGGGACTGCTAGATAAGCCCAATGTGTGTTTGCACG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 90 bp ATGTTTCTGGGAGGCATATTCACTGTATTACGCTCCACCCTTTACTaGATGTTTTGCATCAAATGTAGTCCACAGCAGGCAGGCGCCTGC +
Preference number: 2 (lower is better)
Translates to: MFLGGIFTVLRSTLY*MFCIKCSPQQAGAC
Trigger: GCAGGCGCCTGCCTGCTGTGGACTACATTTGATGCAAAACATCAAGTAAAGGGTGGAGCGTAATACAGTGAATATGCCTCCCAGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 90 bp CAGTGTCTGTCTGGAGCTTCATGTGTCACCTGTGCTCACATTTCATaGGCCAGAATTAGTCATAGGACCCTGAATGAGTACAAGGGGGAT +
Preference number: 2 (lower is better)
Translates to: QCLSGASCVTCAHIS*ARISHRTLNEYKGD
Trigger: ATCCCCCTTGTACTCATTCAGGGTCCTATGACTAATTCTGGCCAATGAAATGTGAGCACAGGTGACACATGAAGCTCCAGACAGACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGACTGTCCCAACCTGTTaGTCTGGTGGTTTTACATTC +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVTVPTC*SGGFTF
Trigger: GAATGTAAAACCACCAGAGCAACAGGTTGGGACAGT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGAAAGCCAGAAAGGAGTaGATCTCCAGGAAGGGGCGG +
Preference number: 2 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLKARKE*ISRKGR
Trigger: CCGCCCCTTCCTGGAGATGCACTCCTTTCTGGCTTT...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAATTTGCCGCAAGGCTCTaGACCGTCAAAGAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEFAARL*TVKESR
Trigger: CCTACTCTCTTTGACGGTGCAGAGCCTTGCGGCAAA...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACTCCGCCTCCAGAAGTaGTGGGATTACAAGCATGAG +
Preference number: 2 (lower is better)
Translates to: TNENKKGKHTQHGNEEAELRLQK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTCTGGAGGCGGAG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAAAGGTCCAGGAGACCTaGATGCAGAGTCCACGCTGC +
Preference number: 2 (lower is better)
Translates to: SASTKAINKELRVCLFSIKVQET*MQSPRC
Trigger: GCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCTT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGTATATACTGTTTCTTTaGGGAAGCCATGTACTCAGA +
Preference number: 2 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLYILFL*GSHVLR
Trigger: TCTGAGTACATGGCTTCCCCAAAGAAACAGTATATA...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGGGCTACTAGGTGTATaGCAAAAATGGGATTTCATA +
Preference number: 2 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTGLLGV*QKWDFI
Trigger: TATGAAATCCCATTTTTGCCATACACCTAGTAGCCC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 90 bp AACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCCTCTTTaGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: NNPLLDISKDQWLPL*SACAKSHHVCLLPK
Trigger: TTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAGAGGCAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAGGCTTACATTCTGCCTaGGTCTGGCGTAAGGTTATG +
Preference number: 2 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEGLHSA*VWRKVM
Trigger: CATAACCTTACGCCAGACTCAGGCAGAATGTAAGCC...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACATTCTGGAAGGCAATTTaGGGCAATACATATTACAAG +
Preference number: 2 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTFWKAI*GNTYYK
Trigger: CTTGTAATATGTATTGCCTCAAATTGCCTTCCAGAA...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAATATTTATACAACCTTaGCATCAGAATTGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVIFIQP*HQNWED
Trigger: GTCTTCCCAATTCTGATGGCAAGGTTGTATAAATAT...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATACTGAAAATGCAGTCCTaGCCCTGCAGCTTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SASTKAINKELRVCLFSILKMQS*PCSFQA
Trigger: TGCCTGGAAGCTGCAGGGCCAGGACTGCATTTTCAG...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCTTGAGATCGGTACATaGAAGAGGCATGTAAGTAAC +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVLEIGT*KRHVSN
Trigger: GTTACTTACATGCCTCTTCCATGTACCGATCTCAAG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR TCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGAGGCCATACTCTCTTTaGCAAGGCAATAAAACTAGA +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVRPYSL*QGNKTR
Trigger: TCTAGTTTTATTGCCTTGTCAAAGAGAGTATGGCCT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAAAGTCACATCACGTCTaGCTTCTTCCCAAAGGTGCA +
Preference number: 2 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEKSHHV*LLPKGA
Trigger: TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTT...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAAACCTGTTGCTCTGGTaGTTTTACATTCCCCGGGCG +
Preference number: 2 (lower is better)
Translates to: SASTKAINKELRVCLFSINLLLW*FYIPRA
Trigger: CGCCCGGGGAATGTAAAACCACCAGAGCAACAGGTT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGTTTAGTCCAAAGCTATaGCGATCCAAACAATGTGGT +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVFSPKL*RSKQCG
Trigger: ACCACATTGTTTGGATCGCCATAGCTTTGGACTAAA...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGTCTTGGAAAGATTCCTaGAAAACCAGAATCATTCCA +
Preference number: 2 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVSWKDS*KTRIIP
Trigger: TGGAATGATTCTGGTTTTGCAGGAATCTTTCCAAGA...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGATGCTCACGAGTGAATaGCTTACATTCTGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLMLTSE*LTFCLS
Trigger: ACTCAGGCAGAATGTAAGCCATTCACTCGTGAGCAT...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACTTTACTTGATGTTTTaGATCAAATGTAGTCCACAG +
Preference number: 2 (lower is better)
Translates to: TNENKKGKHTQHGNEEAELYLMF*IKCSPQ
Trigger: CTGTGGACTACATTTGATGCAAAACATCAAGTAAAG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 90 bp ACTGTGGGTGGGAGTATAATTGGGTCTGTCTTTCTGGAAGGCAATTaGAGGCAATACATATTACAAGTCCTAAAAATGTGCATTCTTTTT +
Preference number: 2 (lower is better)
Translates to: TVGGSIIGSVFLEGN*RQYILQVLKMCILF
Trigger: AAAAAGAATGCACATTTTTAGGACTTGTAATATGTATTGCCTCAAATTGCCTTCCAGAAAGACAGACCCAATTATACTCCCACCCACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp GCACGTCACACCAGCTCAAGGGAACACCGTCCAGGTTaGTCCAGGGCCAGGGCGGGGCCTGGGCCTCGGCCA +
Preference number: 3 (lower is better)
Translates to: ARHTSSREHRPG*SRARAGPGPRP
Trigger: TGGCCGAGGCCCAGGCCCCGCCCTGGCCCTGGAGCAACCTGGACGGTGTTCCCTTGAGCTGGTGTGACGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp GCACCACTTGGGACTCTGCCGTGGTTTACGGGCTCCTaGCAGGTGCCCTGGGGGTCTCTAGGGCCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: APLGTLPWFTGS*QVPWGSLGPRR
Trigger: TCTCCTGGGCCCTAGAGACCCCCAGGGCACCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp ACTCTGCCGTGGTTTACGGGCTCCTGCCAGGTGCCCTaGGGGTCTCTAGGGCCCAGGAGAACACTTTGCCGC +
Preference number: 3 (lower is better)
Translates to: TLPWFTGSCQVP*GSLGPRRTLCR
Trigger: GCGGCAAAGTGTTCTCCTGGGCCCTAGAGACCCCCAGGGCACCTGGCAGGAGCCCGTAAACCACGGCAGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp ATCAAGGTCCAGGAGACCTGGATGCAGAGTCCACGCTaGTGGTCACCGCTGGGTGACCCTGGGCGTGTCACT +
Preference number: 3 (lower is better)
Translates to: IKVQETWMQSPR*WSPLGDPGRVT
Trigger: AGTGACACGCCCAGGGTCACCCAGCGGTGACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCTTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp CCTGCCCACCACCATCAAGGCTGTGCTCATGGAGCCTaGAGGCTGGAGACCAACTGCCCTCTGTGCACAGTC +
Preference number: 3 (lower is better)
Translates to: PAHHHQGCAHGA*RLETNCPLCTV
Trigger: GACTGTGCACAGAGGGCAGTTGGTCTCCAGCCTGCAGGCTCCATGAGCACAGCCTTGATGGTGGTGGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp CCCATCACTCGCCAAAACATGCACCACTTGGGACTCTaGCGTGGTTTACGGGCTCCTGCCAGGTGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: PITRQNMHHLGL*RGLRAPARCPG
Trigger: CCCAGGGCACCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTGGCGAGTGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp AAGGTCCAGGAGACCTGGATGCAGAGTCCACGCTGCTaGTCACCGCTGGGTGACCCTGGGCGTGTCACTTTC +
Preference number: 3 (lower is better)
Translates to: KVQETWMQSPRC*SPLGDPGRVTF
Trigger: GAAAGTGACACGCCCAGGGTCACCCAGCGGTGACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp CACTCGCCAAAACATGCACCACTTGGGACTCTGCCGTaGTTTACGGGCTCCTGCCAGGTGCCCTGGGGGTCT +
Preference number: 3 (lower is better)
Translates to: HSPKHAPLGTLP*FTGSCQVPWGS
Trigger: AGACCCCCAGGGCACCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTGGCGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp CAGGTCGTCCCAAGTCTGGAGAAGTGGGGTGCACACTaGCCTCTGTCGTCGGCTGCCTATGAGAGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: QVVPSLEKWGAH*PLSSAAYESSA
Trigger: GGCAGAGCTCTCATAGGCAGCCGACGACAGAGGCCAGTGTGCACCCCACTTCTCCAGACTTGGGACGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp GTCTGCCTTCTTCCCAAAGGTGCACCTGGCCACATGTaGGGTCCCACCATAACGTCCCCAGCGCGTCCTGTG +
Preference number: 3 (lower is better)
Translates to: VCLLPKGAPGHM*GPTITSPARPV
Trigger: CACAGGACGCGCTGGGGACGTTATGGTGGGACCTCACATGTGGCCAGGTGCACCTTTGGGAAGAAGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp CTGGATGCAGAGTCCACGCTGCTGGTCACCGCTGGGTaGCCCTGGGCGTGTCACTTTCTCTGTCTCTACTTC +
Preference number: 3 (lower is better)
Translates to: LDAESTLLVTAG*PWACHFLCLYF
Trigger: GAAGTAGAGACAGAGAAAGTGACACGCCCAGGGTCACCCAGCGGTGACCAGCAGCGTGGACTCTGCATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp GGTCCCGTTCAAGCTGCTCCCACCACTGAGCAAGGCTaGTCCCTCCCCAGAAAGCCAGAAAGGAGTGCATCT +
Preference number: 3 (lower is better)
Translates to: GPVQAAPTTEQG*SLPRKPERSAS
Trigger: AGATGCACTCCTTTCTGGCTTTCTGGGGAGGGAGCAGCCTTGCTCAGTGGTGGGAGCAGCTTGAACGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp CAGTCCTGCCCATCACTCGCCAAAACATGCACCACTTaGGACTCTGCCGTGGTTTACGGGCTCCTGCCAGGT +
Preference number: 3 (lower is better)
Translates to: QSCPSLAKTCTT*DSAVVYGLLPG
Trigger: ACCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTGGCGAGTGATGGGCAGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp AGAGCCACCGTGGGCTCCTCCTGGGGTCAGCGATCCTaGAGCCTGGTATTCATGAGGTCTTCAGAATGTCCC +
Preference number: 3 (lower is better)
Translates to: RATVGSSWGQRS*SLVFMRSSECP
Trigger: GGGACATTCTGAAGACCTCATGAATACCAGGCTTCAGGATCGCTGACCCCAGGAGGAGCCCACGGTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp GTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACCTaGCCACATGTGAGGTCCCACCATAACGTCCCCAGC +
Preference number: 3 (lower is better)
Translates to: VTSRLPSSQRCT*PHVRSHHNVPS
Trigger: GCTGGGGACGTTATGGTGGGACCTCACATGTGGCCAGGTGCACCTTTGGGAAGAAGGCAGACGTGATGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp TTCAGAATGTCCCAGGTCGTCCCAAGTCTGGAGAAGTaGGGTGCACACTGGCCTCTGTCGTCGGCTGCCTAT +
Preference number: 3 (lower is better)
Translates to: FRMSQVVPSLEK*GAHWPLSSAAY
Trigger: ATAGGCAGCCGACGACAGAGGCCAGTGTGCACCCCACTTCTCCAGACTTGGGACGACCTGGGACATTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp ATGAGGTCTTCAGAATGTCCCAGGTCGTCCCAAGTCTaGAGAAGTGGGGTGCACACTGGCCTCTGTCGTCGG +
Preference number: 3 (lower is better)
Translates to: MRSSECPRSSQV*RSGVHTGLCRR
Trigger: CCGACGACAGAGGCCAGTGTGCACCCCACTTCTCCAGACTTGGGACGACCTGGGACATTCTGAAGACCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACACAGAGTCTCGCTCCGTaGCCCAGGCTGGTGCTATCT +
Preference number: 3 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTQSLAP*PRLVLS
Trigger: AGATAGCACCAGCCTGGGCAACGGAGCGAGACTCTG...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp CTTCCAGGCAGCACAAGCGGCTGCGATGCTCACGAGTaGATGGCTTACATTCTGCCTGAGTCTGGCGTAAGG +
Preference number: 3 (lower is better)
Translates to: LPGSTSGCDAHE*MAYILPESGVR
Trigger: CCTTACGCCAGACTCAGGCAGAATGTAAGCCATTCACTCGTGAGCATCGCAGCCGCTTGTGCTGCCTGGAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp TCAAAAGATACTGCATCAAGGTCCAGGAGACCTGGATaGAGAGTCCACGCTGCTGGTCACCGCTGGGTGACC +
Preference number: 3 (lower is better)
Translates to: SKDTASRSRRPG*RVHAAGHRWVT
Trigger: GGTCACCCAGCGGTGACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCTTGATGCAGTATCTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp AAGTTAAATGAAGTCATTGTGGCGCCAGACAGGGCATaGCTACAGGGAGGGCCCAGGCAGGCAGAGCCAAGT +
Preference number: 3 (lower is better)
Translates to: KLNEVIVAPDRA*LQGGPRQAEPS
Trigger: ACTTGGCTCTGCCTGCCTGGGCCCTCCCTGTAGCCATGCCCTGTCTGGCGCCACAATGACTTCATTTAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp CCTCCTGGGGTCAGCGATCCTGAAGCCTGGTATTCATaGGGTCTTCAGAATGTCCCAGGTCGTCCCAAGTCT +
Preference number: 3 (lower is better)
Translates to: PPGVSDPEAWYS*GLQNVPGRPKS
Trigger: AGACTTGGGACGACCTGGGACATTCTGAAGACCTCATGAATACCAGGCTTCAGGATCGCTGACCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp GTGAATCATCAGTCCTGCCCATCACTCGCCAAAACATaGACCACTTGGGACTCTGCCGTGGTTTACGGGCTC +
Preference number: 3 (lower is better)
Translates to: VNHQSCPSLAKT*TTWDSAVVYGL
Trigger: GAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTGGCGAGTGATGGGCAGGACTGATGATTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp TGTCTCAAAAGATACTGCATCAAGGTCCAGGAGACCTaGATGCAGAGTCCACGCTGCTGGTCACCGCTGGGT +
Preference number: 3 (lower is better)
Translates to: CLKRYCIKVQET*MQSPRCWSPLG
Trigger: ACCCAGCGGTGACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCTTGATGCAGTATCTTTTGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp CTCTGCATTAAAGGAATACGAAAACGGAGGAGATCCTaGAGGGTACGGGAACAGGGTAGGCATGGGCCGGTC +
Preference number: 3 (lower is better)
Translates to: LCIKGIRKRRRS*RVREQGRHGPV
Trigger: GACCGGCCCATGCCTACCCTGTTCCCGTACCCTCCAGGATCTCCTCCGTTTTCGTATTCCTTTAATGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp AATCCCCCATCAGCTGAGTTCCATGAACGCCTGCAATaGAGCAGCTCACCCCTCCACTGGAACAGAGCAGAT +
Preference number: 3 (lower is better)
Translates to: NPPSAEFHERLQ*SSSPLHWNRAD
Trigger: ATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAGGCGTTCATGGAACTCAGCTGATGGGGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGGGAACACCGTCCAGGTaGCTCCAGGGCCAGGGCGGG +
Preference number: 3 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLGTPSR*LQGQGG
Trigger: CCCGCCCTGGCCCTGGAGCAACCTGGACGGTGTTCC...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAGGCCTCCCACTTGTTTaGAACATACTGCTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVGLPLV*NILLCL
Trigger: GAGGCAGAGCAGTATGTTCAAAACAAGTGGGAGGCC...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACAGTGGCTGCCTCTTTaGAGTGCCTGTGCTAAGTCA +
Preference number: 3 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVQWLPL*SACAKS
Trigger: TGACTTAGCACAGGCACTCAAAAGAGGCAGCCACTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp ACTCTCCTCTGGAGAAAGGGGAGTGCTGAAGCTGACTaGGTCAAATTGCATGAGCCTGGTGGAACAGGGGCT +
Preference number: 3 (lower is better)
Translates to: TLLWRKGSAEAD*VKLHEPGGTGA
Trigger: AGCCCCTGTTCCACCAGGCTCATGCAATTTGACTCAGTCAGCTTCAGCACTCCCCTTTCTCCAGAGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp GAGTTCACAGCACACTCAAGGCCAGGGTGCTTATCCTaGCACCCAACAGAAGGGCTACTAGGTGTATGGCAA +
Preference number: 3 (lower is better)
Translates to: EFTAHSRPGCLS*HPTEGLLGVWQ
Trigger: TTGCCATACACCTAGTAGCCCTTCTGTTGGGTGCCAGGATAAGCACCCTGGCCTTGAGTGTGCTGTGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCGCATCCAGCTGGGTCTaGACTGGAATGAAAGGTTAT +
Preference number: 3 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVASSWV*TGMKGY
Trigger: ATAACCTTTCATTCCAGTCAAGACCCAGCTGGATGC...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAACCACTCCTACACATTaGGGAAAAGCCGGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVTTPTH*GKAGSV
Trigger: CACAGAACCGGCTTTTCCCAAATGTGTAGGAGTGGT...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp CTACTACACAAAAGTCAGAGGACCTTAGTGGGCTGGTaGCGCAGGAACAGCGAAGCAGGTACACTTAGAGCC +
Preference number: 3 (lower is better)
Translates to: LLHKSQRTLVGW*RRNSEAGTLRA
Trigger: GGCTCTAAGTGTACCTGCTTCGCTGTTCCTGCGTCACCAGCCCACTAAGGTCCTCTGACTTTTGTGTAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp ACATCAGCATTTGCTGAGGGAAGGGAAGGCAGACACTaGGGAACTGCTCATGGGCATTTCAGTGTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: TSAFAEGREGRH*GTAHGHFSVCL
Trigger: CAGACAGACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGCAAATGCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp TGCCTTCTCAGAAGGCTAGTCCCCACAGAAGAAAAGTaGCTCATAGGTTGCCTTTGTGTGGGCCCTACTGAG +
Preference number: 3 (lower is better)
Translates to: CLLRRLVPTEEK*LIGCLCVGPTE
Trigger: CTCAGTAGGGCCCACACAAAGGCAACCTATGAGGCACTTTTCTTCTGTGGGGACTAGCCTTCTGAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp TCTCTTGGCACCCACGGGTCACCAAAGGGACTAGAGTaGCATGTCTCAAAAGATACTGCATCAAGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: SLGTHGSPKGLE*HVSKDTASRSR
Trigger: CCTGGACCTTGATGCAGTATCTTTTGAGACATGCCACTCTAGTCCCTTTGGTGACCCGTGGGTGCCAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp AGGTCCCACCATAACGTCCCCAGCGCGTCCTGTGGTTaGCTCTCATCCAAAATTGTCCCTGGTTTCTATAGA +
Preference number: 3 (lower is better)
Translates to: RSHHNVPSASCG*LSSKIVPGFYR
Trigger: TCTATAGAAACCAGGGACAATTTTGGATGAGAGCCAACCACAGGACGCGCTGGGGACGTTATGGTGGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp GGAGGGCCCAGGCAGGCAGAGCCAAGTACAGCTTCATaGAGATTCCTACAGCACAGAACAGCTAATTCCTAT +
Preference number: 3 (lower is better)
Translates to: GGPRQAEPSTAS*RFLQHRTANSY
Trigger: ATAGGAATTAGCTGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGGCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCGGCTCTCATCCAAAATaGTCCCTGGTTTCTATAGAG +
Preference number: 3 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVGSHPK*SLVSIE
Trigger: CTCTATAGAAACCAGGGACAATTTTGGATGAGAGCC...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAGCCCAGGAGAACACTTaGCCGCAAGGCTCTGCACCG +
Preference number: 3 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEAQENT*PQGSAP
Trigger: CGGTGCAGAGCCTTGCGGCAAAGTGTTCTCCTGGGC...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACCTCCCCTTAACATGTaGGAATATGTAAGCTCCCCA +
Preference number: 3 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVPPLNM*EYVSSP
Trigger: TGGGGAGCTTACATATTCCAACATGTTAAGGGGAGG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp CTGGGCGTGTCACTTTCTCTGTCTCTACTTCCCATCTaGAAAATGCAGGTGACAGTCTCTGCCCTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: LGVSLSLSLLPI*KMQVTVSALFS
Trigger: AGAGAACAGGGCAGAGACTGTCACCTGCATTTTGCAGATGGGAAGTAGAGACAGAGAAAGTGACACGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp AGGCTAGTCCCCACAGAAGAAAAGTGCCTCATAGGTTaGCTTTGTGTGGGCCCTACTGAGGCAGAATATGAC +
Preference number: 3 (lower is better)
Translates to: RLVPTEEKCLIG*LCVGPTEAEYD
Trigger: GTCATATTCTGCCTCAGTAGGGCCCACACAAAGGCAACCTATGAGGCACTTTTCTTCTGTGGGGACTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp TTCTCTTCTAAAGGCTCCGGGGAGAAGCCATTTCCTTaGCCTTTCTGGTTTCTAGAGGTTGCCCCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: FSSKGSGEKPFP*PFWFLEVAPVP
Trigger: AGGAACAGGGGCAACCTCTAGAAACCAGAAAGGGCAAGGAAATGGCTTCTCCCCGGAGCCTTTAGAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp AGAGCAGATCTGGGGAAAGTAATAGTCTTCTTACTGTaGTGTTCCCAGGGCCTGGGCATGAGGGTGCACAAT +
Preference number: 3 (lower is better)
Translates to: RADLGKVIVFLL*CSQGLGMRVHN
Trigger: ATTGTGCACCCTCATGCCCAGGCCCTGGGAACACCACAGTAAGAAGACTATTACTTTCCCCAGATCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCAAAACATGCACCACTaGGGACTCTGCCGTGGTTTA +
Preference number: 3 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVQNMHH*GLCRGL
Trigger: TAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp TGGAAACACCAAAATCAGGAGACCTCAATTGCAAACTaGAAATGCAGTCCTGGCCCTGCAGCTTCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: WKHQNQETSIAN*KCSPGPAASRQ
Trigger: CTGCCTGGAAGCTGCAGGGCCAGGACTGCATTTTCAGTTTGCAATTGAGGTCTCCTGATTTTGGTGTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp GGTGGCAGCCACAGAATTATTTCCACTCAGTGGTCTTaGCTCCCGTGCAAACACACATTGGGCTTATCTAGC +
Preference number: 3 (lower is better)
Translates to: GGSHRIISTQWS*LPCKHTLGLSS
Trigger: GCTAGATAAGCCCAATGTGTGTTTGCACGGGAGTCAAGACCACTGAGTGGAAATAATTCTGTGGCTGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp ACCAAAGGGACTAGAGTGGCATGTCTCAAAAGATACTaGATCAAGGTCCAGGAGACCTGGATGCAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: TKGTRVACLKRY*IKVQETWMQSP
Trigger: TGGACTCTGCATCCAGGTCTCCTGGACCTTGATGCAGTATCTTTTGAGACATGCCACTCTAGTCCCTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTTTTTAAAGGTCCTCTaGGTTAAAGGGTTCCAAGTT +
Preference number: 3 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVFLKVL*VKGFQV
Trigger: AACTTGGAACCCTTTAACCAAGAGGACCTTTAAAAA...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGGAACTCAGGGTGTGTTaGTTTTCCATAGAACTGGCC +
Preference number: 3 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVELRVC*FSIELA
Trigger: GGCCAGTTCTATGGAAAACAAACACACCCTGAGTTC...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAATATATACTGTTTCTTaGGGGAAGCCATGTACTCAG +
Preference number: 3 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVIYTVS*GKPCTQ
Trigger: CTGAGTACATGGCTTCCCCAAAGAAACAGTATATAT...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp CTGCGATGCTCACGAGTGAATGGCTTACATTCTGCCTaGGTCTGGCGTAAGGTTATGACAACAGTACTGAGA +
Preference number: 3 (lower is better)
Translates to: LRCSRVNGLHSA*VWRKVMTTVLR
Trigger: TCTCAGTACTGTTGTCATAACCTTACGCCAGACTCAGGCAGAATGTAAGCCATTCACTCGTGAGCATCGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp TTCCATTCCTGCGATCTCAGGGCCTCCCACTTGTTTTaGACATACTGCTCTGCCTCCACTAAAGCCATCAAT +
Preference number: 3 (lower is better)
Translates to: FHSCDLRASHLF*TYCSASTKAIN
Trigger: ATTGATGGCTTTAGTGGAGGCAGAGCAGTATGTTCAAAACAAGTGGGAGGCCCTGAGATCGCAGGAATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp TTCTGGATATTAGCAAAGACCAGTGGCTGCCTCTTTTaGGTGCCTGTGCTAAGTCACATCACGTCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: FWILAKTSGCLF*VPVLSHITSAF
Trigger: GAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAGAGGCAGCCACTGGTCTTTGCTAATATCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp TTCACTGTATTACGCTCCACCCTTTACTTGATGTTTTaGATCAAATGTAGTCCACAGCAGGCAGGCGCCTGC +
Preference number: 3 (lower is better)
Translates to: FTVLRSTLYLMF*IKCSPQQAGAC
Trigger: GCAGGCGCCTGCCTGCTGTGGACTACATTTGATGCAAAACATCAAGTAAAGGGTGGAGCGTAATACAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp CCCCACTTCCACTTATGCTTTGGTTCAGGAGTAGCCTaGAAGGACATTAGCCTACTTAGGGAGATCAAGAAC +
Preference number: 3 (lower is better)
Translates to: PHFHLCFGSGVA*KDISLLREIKN
Trigger: GTTCTTGATCTCCCTAAGTAGGCTAATGTCCTTGCAGGCTACTCCTGAACCAAAGCATAAGTGGAAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp ACTGCGGAACTGCTCATGGGCATTTCAGTGTCTGTCTaGAGCTTCATGTGTCACCTGTGCTCACATTTCATT +
Preference number: 3 (lower is better)
Translates to: TAELLMGISVSV*SFMCHLCSHFI
Trigger: AATGAAATGTGAGCACAGGTGACACATGAAGCTCCAGACAGACACTGAAATGCCCATGAGCAGTTCCGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAAGAAAACCCATATTCTaGAGATCGGTACATGGAAGA +
Preference number: 3 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTRKPIF*RSVHGR
Trigger: TCTTCCATGTACCGATCTCAAGAATATGGGTTTTCT...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp CCGCAAGGCTCTGCACCGTCAAAGAGAGTAGGGCACTaGACAATTCCACTTCAAACAAAAGATCCACAAACT +
Preference number: 3 (lower is better)
Translates to: PQGSAPSKRVGH*TIPLQTKDPQT
Trigger: AGTTTGTGGATCTTTTGTTTGAAGTGGAATTGTTCAGTGCCCTACTCTCTTTGACGGTGCAGAGCCTTGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR GCA 72 bp TCTGTCTATGCTTTAGGAAGAAGCCTCTGGCAGCTCTaGATTAAAGGAATACGAAAACGGAGGAGATCCTGG +
Preference number: 3 (lower is better)
Translates to: SVYALGRSLWQL*IKGIRKRRRSW
Trigger: CCAGGATCTCCTCCGTTTTCGTATTCCTTTAATGCAGAGCTGCCAGAGGCTTCTTCCTAAAGCATAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACACAAGTTCGAGGTCTaGTGTGGATACTGGTTCTCT +
Preference number: 3 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEHKFEV*CGYWFS
Trigger: AGAGAACCAGTATCCACACAAGACCTCGAACTTGTG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp CAGTACACACTCACACACTGTGGGTGGGAGTATAATTaGGTCTGTCTTTCTGGAAGGCAATTTGAGGCAATA +
Preference number: 3 (lower is better)
Translates to: QYTLTHCGWEYN*VCLSGRQFEAI
Trigger: TATTGCCTCAAATTGCCTTCCAGAAAGACAGACCCAATTATACTCCCACCCACAGTGTGTGAGTGTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp TTAAAGAGGAAGCAGTACACACTCACACACTGTGGGTaGGAGTATAATTGGGTCTGTCTTTCTGGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: LKRKQYTLTHCG*EYNWVCLSGRQ
Trigger: TTGCCTTCCAGAAAGACAGACCCAATTATACTCCCACCCACAGTGTGTGAGTGTGTACTGCTTCCTCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp GAGGCATATTCACTGTATTACGCTCCACCCTTTACTTaGTGTTTTGCATCAAATGTAGTCCACAGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: EAYSLYYAPPFT*CFASNVVHSRQ
Trigger: CTGCCTGCTGTGGACTACATTTGATGCAAAACATCAAGTAAAGGGTGGAGCGTAATACAGTGAATATGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp ACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTaGCTGCCTCTTTTGAGTGCCTGTGCTAAGTCACAT +
Preference number: 3 (lower is better)
Translates to: TNNPLLDISKDQ*LPLLSACAKSH
Trigger: ATGTGACTTAGCACAGGCACTCAAAAGAGGCAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR-3UTR CAA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACGCTCCACCCTTTACTaGATGTTTTGCATCAAATGT +
Preference number: 3 (lower is better)
Translates to: TNENKKGKHTQHGNEEAERSTLY*MFCIKC
Trigger: ACATTTGATGCAAAACATCAAGTAAAGGGTGGAGCG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp AAAGCCGGTTCTGTGTTTGATACAGACTTTGCCATGTaGATAGCCTGTTCCAACAGCTCTGGAAAAACCTTT +
Preference number: 3 (lower is better)
Translates to: KAGSVFDTDFAM*IACSNSSGKTF
Trigger: AAAGGTTTTTCCAGAGCTGTTGGAACAGGCTATTCACATGGCAAAGTCTGTATCAAACACAGAACCGGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp CAGAAGGAAAGCTTATCAAGGTATAGCAGCCAGTCTTaGAAACACCAAAATCAGGAGACCTCAATTGCAAAC +
Preference number: 3 (lower is better)
Translates to: QKESLSRYSSQS*KHQNQETSIAN
Trigger: GTTTGCAATTGAGGTCTCCTGATTTTGGTGTTTCCAAGACTGGCTGCTATACCTTGATAAGCTTTCCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CCA 72 bp ATATGCTCTTATCAGGATATAAGAATTATTTTCTCTTaGCACCCACGGGTCACCAAAGGGACTAGAGTGGCA +
Preference number: 3 (lower is better)
Translates to: ICSYQDIRIIFS*HPRVTKGTRVA
Trigger: TGCCACTCTAGTCCCTTTGGTGACCCGTGGGTGCCAAGAGAAAATAATTCTTATATCCTGATAAGAGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR TCA 72 bp CTAAAGAAAAAGAGCCCTGTTAAAATAGGCAGAGCATaGTGTTTCTGGGAGGCATATTCACTGTATTACGCT +
Preference number: 3 (lower is better)
Translates to: LKKKSPVKIGRA*CFWEAYSLYYA
Trigger: AGCGTAATACAGTGAATATGCCTCCCAGAAACATCATGCTCTGCCTATTTTAACAGGGCTCTTTTTCTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGGGAAGGGGCGGGCAGTaGACAGGCCACCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLGRGGQ*TGHPQP
Trigger: TGGCTGGGGGTGGCCTGTCCACTGCCCGCCCCTTCC...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 72 bp GGTGCCCTGGGGGTCTCTAGGGCCCAGGAGAACACTTaGCCGCAAGGCTCTGCACCGTCAAAGAGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: GALGVSRAQENT*PQGSAPSKRVG
Trigger: CCCTACTCTCTTTGACGGTGCAGAGCCTTGCGGCAAAGTGTTCTCCTGGGCCCTAGAGACCCCCAGGGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGAACACCGTCCAGGTTaGTCCAGGGCCAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTEHRPG*SRARAG
Trigger: CCCCGCCCTGGCCCTGGAGCAACCTGGACGGTGTTC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGGCTGCTGGTCACCGCTaGGTGACCCTGGGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLAAGHR*VTLGVS
Trigger: TGACACGCCCAGGGTCACCCAGCGGTGACCAGCAGC...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGCGCCAGACAGGGCATaGCTACAGGGAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTAPDRA*LQGGPR
Trigger: CCTGGGCCCTCCCTGTAGCCATGCCCTGTCTGGCGC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCAAGTGGGGTGCACACTaGCCTCTGTCGTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVKWGAH*PLSSAA
Trigger: GGCAGCCGACGACAGAGGCCAGTGTGCACCCCACTT...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 72 bp TCAGTCCTGCCCATCACTCGCCAAAACATGCACCACTaGGGACTCTGCCGTGGTTTACGGGCTCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVLPITRQNMHH*GLCRGLRAPAR
Trigger: CCTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTGGCGAGTGATGGGCAGGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAGTCGTCGGCTGCCTATaGGAGCTCTGCCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVVVGCL*ELCLVG
Trigger: CCCCACAAGGCAGAGCTCTCATAGGCAGCCGACGAC...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCGCCTCCTGGGTTCACTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVASWVH*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGTGAACCCAGGAGGC...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCACTGCACTCCAGCCTaGGGGCCAGGGTGGACCCCG +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVHCTPA*GPGWTP
Trigger: CGGGGTCCACCCTGGCCCCCAGGCTGGAGTGCAGTG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCCAGGTGAGGGTAACATaGAGGGAGAAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVQVRVT*REKGAA
Trigger: AGCAGCCCCCTTCTCCCTTCATGTTACCCTCACCTG...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCACTGCTTCAGCCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVTASAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCAGT...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACACTGAGATCACGCCACTaGACTCCAGCCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTLRSRH*TPAWGP
Trigger: TGGCCCCCAGGCTGGAGTGCAGTGGCGTGATCTCAG...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCAGGCGTGAGCCACCATaGCCGGCCTGCACAATATAC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVRREPP*PACTIY
Trigger: GTATATTGTGCAGGCCGGGCATGGTGGCTCACGCCT...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTCCCAAAGGTGCACCTaGCCACATGTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVSQRCT*PHVRSH
Trigger: GTGGGACCTCACATGTGGCCAGGTGCACCTTTGGGA...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCATCCTGCCAGGTGCCCTaGGGGTCTCTAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGASCQVP*GSLGPR
Trigger: CCTGGGCCCTAGAGACCCCCAGGGCACCTGGCAGGA...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGGCAACCTCTGCCTCCTaGGTTCACTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLATSAS*VHCLSL
Trigger: GAGGCTGAGGCAGTGAACCCAGGAGGCAGAGGTTGC...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCCCAAGTCTGGAGAAGTaGGGTGCACACTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVPSLEK*GAHWPL
Trigger: CAGAGGCCAGTGTGCACCCCACTTCTCCAGACTTGG...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCCTCTGTTTCCATTCCTaGGATCTCAGGGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVLCFHS*DLRASH
Trigger: GTGGGAGGCCCTGAGATCGCAGGAATGGAAACAGAG...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCAGCAGGCAGGCGCCTaGCCACCACCATCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVQQAGA*PPPSRL
Trigger: CAGCCTTGATGGTGGTGGGCAGGCGCCTGCCTGCTG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGCCCAGGAGAACACTTTaGCGCAAGGCTCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLPRRTL*RKALHR
Trigger: ACGGTGCAGAGCCTTGCGGCAAAGTGTTCTCCTGGG...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTGGTTTACGGGCTCCTaGCAGGTGCCCTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHWFTGS*QVPWGS
Trigger: AGACCCCCAGGGCACCTGGCAGGAGCCCGTAAACCA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACACCACTTGGGACTCTaGCGTGGTTTACGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVHHLGL*RGLRAP
Trigger: AGGAGCCCGTAAACCACGGCAGAGTCCCAAGTGGTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCAGTTCCATGAACGCCTaGAATGGAGCAGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVSSMNA*NGAAHP
Trigger: GGGGTGAGCTGCTCCATTGCAGGCGTTCATGGAACT...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCGGTGGGGGCTGTGTATaGTGGCTTGCACCTGTGATT +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVGGGCV*WLAPVI
Trigger: AATCACAGGTGCAAGCCACCATACACAGCCCCCACC...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGCATGAACGCCTGCAATaGAGCAGCTCACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLHERLQ*SSSPLH
Trigger: GTGGAGGGGTGAGCTGCTCCATTGCAGGCGTTCATG...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCACTTAGAGCCACCGTaGGCTCCTCCTGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHHLEPP*APPGVS
Trigger: GCTGACCCCAGGAGGAGCCCACGGTGGCTCTAAGTG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCAGTGGCTGCCTCTTTTaGGTGCCTGTGCTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVSGCLF*VPVLSH
Trigger: GTGACTTAGCACAGGCACTCAAAAGAGGCAGCCACT...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTCCACTCAGTGGTCTTaGCTCCCGTGCAAACACACA +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVSTQWS*LPCKHT
Trigger: TGTGTGTTTGCACGGGAGTCAAGACCACTGAGTGGA...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACACCACCATCAAGGCTGTaGTCATGGAGCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTPPSRL*SWSLQA
Trigger: AGCCTGCAGGCTCCATGAGCACAGCCTTGATGGTGG...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGCCTTGCCATCAGAATTaGGAAGACCTCGCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLPCHQN*EDLAGL
Trigger: AAGCCCGGCGAGGTCTTCCCAATTCTGATGGCAAGG...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCTCTGTTCCCCAGGCTaGAGTGCACCGGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHLCSPG*SAPVPS
Trigger: TGATGGCACCGGTGCACTCCAGCCTGGGGAACAGAG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACCAGGGTGCTTATCCTaGCACCCAACAGAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVPGCLS*HPTEGL
Trigger: TAGCCCTTCTGTTGGGTGCCAGGATAAGCACCCTGG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCGTGATTCTGGCATTGTaGAAGGCCAAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVVILAL*KAKAGG
Trigger: TCCTCCTGCCTTGGCCTTCCACAATGCCAGAATCAC...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAGCCTCCCACTTGTTTTaGACATACTGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVASHLF*TYCSAS
Trigger: GGAGGCAGAGCAGTATGTTCAAAACAAGTGGGAGGC...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGCTGGTCTCGAACTCCTaGTCTCAGGTGATCCATCCA +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLLVSNS*SQVIHP
Trigger: TGGATGGATCACCTGAGATCAGGAGTTCGAGACCAG...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACCCCCAGGGCTCAAGTaGTCCTACTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAPPGLK*SYCFSL
Trigger: GAGGCTGAAGCAGTAGGATCACTTGAGCCCTGGGGG...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACATGGGGTCAGCGATCCTaGAGCCTGGTATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTWGQRS*SLVFMR
Trigger: CCTCATGAATACCAGGCTTCAGGATCGCTGACCCCA...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACACCACTGAGCAAGGCTaGTCCCTCCCCAGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHTTEQG*SLPRKP
Trigger: TGGCTTTCTGGGGAGGGAGCAGCCTTGCTCAGTGGT...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAAGGCTGGAGACCAACTaGCCTCTGTGCACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTRLETN*PLCTVF
Trigger: GAAGACTGTGCACAGAGGGCAGTTGGTCTCCAGCCT...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGAACCTGTTGCTCTGGTaGTTTTACATTCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLNLLLW*FYIPRA
Trigger: CGCCCGGGGAATGTAAAACCACCAGAGCAACAGGTT...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACACCCCAGCGCGTCCTGTaGTTGGCTCTCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTPQRVL*LALIQN
Trigger: ATTTTGGATGAGAGCCAACCACAGGACGCGCTGGGG...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGTCCCAAGCATGGGATaGAGGCATGAGGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTVPSMG*RHEVSS
Trigger: GCTGGATACCTCATGCCTCCATCCCATGCTTGGGAC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCAGTTGCCCCTGTTCCTTaGCTTGTGGCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAVAPVP*LVAPSS
Trigger: GGAGGAAGGGGCCACAAGCCAAGGAACAGGGGCAAC...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCACCTCAATTGCAAACTaGAAATGCAGTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVTSIAN*KCSPGP
Trigger: AGGGCCAGGACTGCATTTTCAGTTTGCAATTGAGGT...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGGGAGGCGCGTACTTTTaGGCCAGTGATAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLGGAYF*ASDNFR
Trigger: TCTGAAGTTATCACTGGCTCAAAAGTACGCGCCTCC...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACATGCCTGGACTCAAGTaGTCCTTCCACCTTGGCGAC +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHMPGLK*SFHLGD
Trigger: GTCGCCAAGGTGGAAGGATCACTTGAGTCCAGGCAT...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGCTTTTACTCTTGAGCTaGGGGCTGGGATTCACCACT +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLLLLLS*GLGFTT
Trigger: AGTGGTGAATCCCAGCCCTCAGCTCAAGAGTAAAAG...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACATCACTCGCCAAAACATaGACCACTTGGGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTSLAKT*TTWDSA
Trigger: GGCAGAGTCCCAAGTGGTGCATGTTTTGGCGAGTGA...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCTCAAGCAATCTTCCTaGCTCCGCCTCCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHLKQSS*LRLQKC
Trigger: GCACTTCTGGAGGCGGAGGCAGGAAGATTGCTTGAG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTATTTGAGAAAGGGTCTTaGTCTGTGTCCCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVFEKGS*SVSQAC
Trigger: GCATGCCTGGGACACAGAGCAAGACCCTTTCTCAAA...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAGCGCAGCGGGGCCACTaGTGGGAAGTAGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEAQRGH*WEVGGR
Trigger: TCTACCCCCTACTTCCCAGCAGTGGCCCCGCTGCGC...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTTTCATCCGGAGGGCTaGGGCCTTTGGGGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHFHPEG*GLWGLK
Trigger: TTTTAGGCCCCAAAGGCCCCAGCCCTCCGGATGAAA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACAGGTCGTCCCAAGTCTaGAGAAGTGGGGTGCACACT +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHRSSQV*RSGVHT
Trigger: AGTGTGCACCCCACTTCTCCAGACTTGGGACGACCT...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGACAGACTTTGCCATGTaGATAGCCTGTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLTDFAM*IACSNS
Trigger: GCTGTTGGAACAGGCTATTCACATGGCAAAGTCTGT...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCCTCCCAACTTTAAAATaGATCCAGCTGGGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVLPTLK*IQLGLD
Trigger: GTCAAGACCCAGCTGGATGCATTTTAAAGTTGGGAG...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGAGGGAAGGCAGACACTaGGGAACTGCTCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVREGRH*GTAHGH
Trigger: ATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACACTCAAGGCCAGGGTaGTTATCCTGGCACCCAACA +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAHSRPG*LSWHPT
Trigger: TGTTGGGTGCCAGGATAAGCACCCTGGCCTTGAGTG...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCTCCGCCTCCAGAAGTaGTGGGATTACAAGCATGAG +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHLRLQK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTCTGGAGGCGGAG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACTGTGTATGGTGGCTTaGACCTGTGATTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVLCMVA*TCDSGI
Trigger: AATGCCAGAATCACAGGTGCAAGCCACCATACACAG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACTGACTGAGTCAAATTaGATGAGCCTGGTGGAACAG +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVLTESN*MSLVEQ
Trigger: CTGTTCCACCAGGCTCATGCAATTTGACTCAGTCAG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACTGAAAATGCAGTCCTaGCCCTGCAGCTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGALKMQS*PCSFQA
Trigger: TGCCTGGAAGCTGCAGGGCCAGGACTGCATTTTCAG...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCCCAACCTGTTGCTCTaGTGGTTTTACATTCCCCGG +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHPNLLL*WFYIPR
Trigger: CCGGGGAATGTAAAACCACCAGAGCAACAGGTTGGG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAGTCTTGTGTGGATACTaGTTCTCTTTCCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVVLCGY*FSFPPR
Trigger: CCTTGGAGGGAAAGAGAACCAGTATCCACACAAGAC...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGGTTCGAGGTCTTGTGTaGATACTGGTTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLVRGLV*ILVLFP
Trigger: GGGAAAGAGAACCAGTATCCACACAAGACCTCGAAC...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGAAACGGAGGAGATCCTaGAGGGTACGGGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVKRRRS*RVREQG
Trigger: ACCCTGTTCCCGTACCCTCCAGGATCTCCTCCGTTT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTGCGATGCTCACGAGTaGATGGCTTACATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHCDAHE*MAYILP
Trigger: AGGCAGAATGTAAGCCATTCACTCGTGAGCATCGCA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCTGGTCACCGCTGGGTaGCCCTGGGCGTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLLVTAG*PWACHF
Trigger: AAAGTGACACGCCCAGGGTCACCCAGCGGTGACCAG...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGACAGCCTCACAGCTGTaGATCATCAGTCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVTASQL*IISPAH
Trigger: ATGGGCAGGACTGATGATTCACAGCTGTGAGGCTGT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGGACATCAGCATTTGCTaGGGGAAGGGAAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVDISIC*GKGRQT
Trigger: TGTCTGCCTTCCCTTCCCTCAGCAAATGCTGATGTC...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACACGCAACATGGGAATaGGGAAGCAGAATACTACAA +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVHATWE*GSRILQ
Trigger: TTGTAGTATTCTGCTTCCTCATTCCCATGTTGCGTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGTCCCTTCAAGTTAAATaGAGTCATTGTGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLSLQVK*SHCGAR
Trigger: TCTGGCGCCACAATGACTTCATTTAACTTGAAGGGA...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACAGAGCAGCGGTAGAGTaGAGAGATGACATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHRAAVE*RDDMAR
Trigger: TCTTGCCATGTCATCTCTTCACTCTACCGCTGCTCT...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACGATCATCTCTCCATCTaGAGGGCCCTTTTGCCAACT +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHDHLSI*RALLPT
Trigger: AGTTGGCAAAAGGGCCCTTCAGATGGAGAGATGATC...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTCAGGAGACCTCAATTaGAAACTGAAAATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVSGDLN*KLKMQS
Trigger: GGACTGCATTTTCAGTTTGCAATTGAGGTCTCCTGA...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCATTTGCCGCAAGGCTCTaGACCGTCAAAGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAFAARL*TVKESR
Trigger: CCTACTCTCTTTGACGGTGCAGAGCCTTGCGGCAAA...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGGTTCAGGAGTAGCCTaGAAGGACATTAGCCTACTT +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTGSGVA*KDISLL
Trigger: AAGTAGGCTAATGTCCTTGCAGGCTACTCCTGAACC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACTTGGGACTCTGCCGTaGTTTACGGGCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAELGTLP*FTGSCQ
Trigger: CTGGCAGGAGCCCGTAAACCACGGCAGAGTCCCAAG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGGGTGGGAGTATAATTaGGTCTGTCTTTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTGWEYN*VCLSGR
Trigger: CCTTCCAGAAAGACAGACCCAATTATACTCCCACCC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACCAGCCTGGAAAACATaGCGGGACTCTGACTCTACA +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAPAWKT*RDSDST
Trigger: TGTAGAGTCAGAGTCCCGCCATGTTTTCCAGGCTGG...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACAGCGGGGCCACTGCTaGGAAGTAGGGGGTAGAACT +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEQRGHC*EVGGRT
Trigger: AGTTCTACCCCCTACTTCCCAGCAGTGGCCCCGCTG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAGATGACATGGCAAGATaGAGAAGCACAAGACTGTGT +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVDDMAR*RSTRLC
Trigger: ACACAGTCTTGTGCTTCTCCATCTTGCCATGTCATC...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCAGGCTTACATTCTGCCTaGGTCTGGCGTAAGGTTATG +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAGLHSA*VWRKVM
Trigger: CATAACCTTACGCCAGACTCAGGCAGAATGTAAGCC...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGAGGCGCAGGTTGCAGTaGGCTGAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLRRRLQ*AEITPL
Trigger: CAGTGGCGTGATCTCAGCTCACTGCAACCTGCGCCT...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACAGCCGGTTCTGTGTTTaGTACAGACTTTGCCATGTG +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHSRFCV*YRLCHV
Trigger: CACATGGCAAAGTCTGTATCAAACACAGAACCGGCT...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACATCTCTACTTCCCATCTaGAAAATGCAGGTGACAGTC +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTSLLPI*KMQVTV
Trigger: GACTGTCACCTGCATTTTGCAGATGGGAAGTAGAGA...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATACCGGGAGGCGCAGGTTaGAGTGAGCTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSIPGGAG*SELRSR
Trigger: GCGTGATCTCAGCTCACTGCAACCTGCGCCTCCCGG...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGGGCAGGGGAAGAGCCTaGAGGGTCCTAGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLGRGRA*RVLGPD
Trigger: ATCAGGTCCTAGGACCCTGCAGGCTCTTCCCCTGCC...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCTGGTTTCTAGAGGTTaGCCCTGTTCCTTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVLVSRG*PCSLAC
Trigger: ACAAGCCAAGGAACAGGGGCAACCTCTAGAAACCAG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAAAGGTCCAGGAGACCTaGATGCAGAGTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEKVQET*MQSPRC
Trigger: GCAGCGTGGACTCTGCATCCAGGTCTCCTGGACCTT...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGAGCCACCTTCCTGCCTaGGTAGTGTTTAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVSHLPA*VVFKAN
Trigger: GTTGGCTTTAAACACTACCCAGGCAGGAAGGTGGCT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAATTTCAGTGTCTGTCTaGAGCTTCATGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTISVSV*SFMCHL
Trigger: CAGGTGACACATGAAGCTCCAGACAGACACTGAAAT...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACTGCGGAACTGCTCATaGGCATTTCAGTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGALRNCS*AFQCLS
Trigger: AGACAGACACTGAAATGCCCATGAGCAGTTCCGCAG...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCGTGCAAACACACATTaGGCTTATCTAGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHRANTH*AYLAVP
Trigger: AGGGACTGCTAGATAAGCCCAATGTGTGTTTGCACG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACATGCAAACAGCATCGGTaGCAGCCACAGAATTATTTC +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTCKQHR*QPQNYF
Trigger: GAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCA...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAGAGGGCTGGGGCCTTTaGGGCCTAAAAGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEEGWGL*GLKEEW
Trigger: CCATTCCTCTTTTAGGCCCCAAAGGCCCCAGCCCTC...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAATTTCCCTCCAAGGCCTaGCCATACTGTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEFPSKA*PYCPNL
Trigger: CAGGTTGGGACAGTATGGTCAGGCCTTGGAGGGAAA...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAGCACCTGGCCACATGTaGGGTCCCACCATAACGTCC +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSIAPGHM*GPTITS
Trigger: GGACGTTATGGTGGGACCTCACATGTGGCCAGGTGC...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGGGCAGGAGGATCATTTaGGCCCAGGAGTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLGRRII*AQESGP
Trigger: TGGTCCTGACTCCTGGGCTCAAATGATCCTCCTGCC...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAGGTGGCTTGCACCTGTaGTTCTGGCATTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEGGLHL*FWHCGR
Trigger: CCTTCCACAATGCCAGAATCACAGGTGCAAGCCACC...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGGAAGCCTGGTATTCATaGGGTCTTCAGAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVEAWYS*GLQNVP
Trigger: TGGGACATTCTGAAGACCTCATGAATACCAGGCTTC...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTCTTGGAAAGATTCCTaGAAAACCAGAATCATTCCA +
Preference number: 4 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVSWKDS*KTRIIP
Trigger: TGGAATGATTCTGGTTTTGCAGGAATCTTTCCAAGA...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCAGTGAATCATCAGTCCTaGCCATCACTCGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAVNHQS*PSLAKT
Trigger: TGTTTTGGCGAGTGATGGGCAGGACTGATGATTCAC...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACGTTGCCCAGGCTGGTaGTATCTCAGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAERCPGW*YLSSLQ
Trigger: TTGCAGTGAGCTGAGATAGCACCAGCCTGGGCAACG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACACACTACTCTCTTATaGAGAGGTAAGAATGAGGTA +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVHTTLL*RGKNEV
Trigger: TACCTCATTCTTACCTCTGCATAAGAGAGTAGTGTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAATGTGGCTCTCGGCAATaGAAACAGCATCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAECGSRQ*KQHRWQ
Trigger: CTGCCACCGATGCTGTTTGCATTGCCGAGAGCCACA...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGTCAAGGCTGTGCTCATaGAGCCTGCAGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLSRLCS*SLQAGD
Trigger: GTCTCCAGCCTGCAGGCTCCATGAGCACAGCCTTGA...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCTCCGTTGCCCAGGCTaGTGCTATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLLRCPG*CYLSSL
Trigger: CAGTGAGCTGAGATAGCACCAGCCTGGGCAACGGAG...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCTGATTGTGAACTCCTaGGCTCAAGCAATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVLIVNS*AQAIFL
Trigger: CAGGAAGATTGCTTGAGCCCAGGAGTTCACAATCAG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGTTTCCTTGCCCTTTCTaGTTTCTAGAGGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVFPCPF*FLEVAP
Trigger: AGGGGCAACCTCTAGAAACCAGAAAGGGCAAGGAAA...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 72 bp GCCAGTCTTGGAAACACCAAAATCAGGAGACCTCAATaGCAAACTGAAAATGCAGTCCTGGCCCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: ASLGNTKIRRPQ*QTENAVLALQL
Trigger: AAGCTGCAGGGCCAGGACTGCATTTTCAGTTTGCAATTGAGGTCTCCTGATTTTGGTGTTTCCAAGACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 72 bp CTTCTGGATATTAGCAAAGACCAGTGGCTGCCTCTTTaGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLDISKDQWLPL*SACAKSHHVCL
Trigger: AAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAGAGGCAGCCACTGGTCTTTGCTAATATCCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGCTCCACCCTTTACTTaGTGTTTTGCATCAAATGTA +
Preference number: 4 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTAPPFT*CFASNV
Trigger: TACATTTGATGCAAAACATCAAGTAAAGGGTGGAGC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACGAAAACCCATATTCTTaGGATCGGTACATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHENPYS*DRYMEE
Trigger: CTCTTCCATGTACCGATCTCAAGAATATGGGTTTTC...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCGCTGCTCTCACAACTaGCGTAAAGTCGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLRCSHN*RKVGTS
Trigger: GGAAGTCCCGACTTTACGTCAGTTGTGAGAGCAGCG...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTATTTCTTTTACTCTTaGGCTGAGGGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHYFFYS*AEGWDS
Trigger: TGAATCCCAGCCCTCAGCTCAAGAGTAAAAGAAATA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAACCTTAGTGGGCTGGTaGCGCAGGAACAGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSITLVGW*RRNSEA
Trigger: TGCTTCGCTGTTCCTGCGTCACCAGCCCACTAAGGT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAGCAGGTGACAGTCTCTaGCCTGTTCTCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEAGDSL*PVLSPN
Trigger: ATTGGGTGAGAGAACAGGGCAGAGACTGTCACCTGC...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATATCCAGGAGACCTGGATaGAGAGTCCACGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSISRRPG*RVHAAG
Trigger: ACCAGCAGCGTGGACTCTGCATCCAGGTCTCCTGGA...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATATGTGCTCATGGAGCCTaGAGGCTGGAGACCAACTGC +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSICAHGA*RLETNC
Trigger: GCAGTTGGTCTCCAGCCTGCAGGCTCCATGAGCACA...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCTGAAGCAGCTGCTCTaGAGATTGTCCTTAGAAAAA +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHLKQLL*RLSLEK
Trigger: TTTTTCTAAGGACAATCTGCAGAGCAGCTGCTTCAG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCAGAGAAGCCATTTCCTTaGCCTTTCTGGTTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAEKPFP*PFWFLE
Trigger: CTCTAGAAACCAGAAAGGGCAAGGAAATGGCTTCTC...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTATAGCAGCCAGTCTTaGAAACACCAAAATCAGGAG +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHYSSQS*KHQNQE
Trigger: CTCCTGATTTTGGTGTTTCCAAGACTGGCTGCTATA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCTTCCACTTATGCTTTaGTTCAGGAGTAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVLPLML*FRSSLQ
Trigger: TTGCAGGCTACTCCTGAACCAAAGCATAAGTGGAAG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGCTGTTCCAACAGCTCTaGAAAAACCTTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVLFQQL*KNLFWW
Trigger: CCACCAGAAAAGGTTTTTCCAGAGCTGTTGGAACAG...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAAGCTCACCCCTCCACTaGAACAGAGCAGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSISSPLH*NRADLG
Trigger: CCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAGAGAGCTCTGCCTTGTaGGGGAGCCTCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSIESSAL*GSLQNP
Trigger: GGGATTTTGGAGGCTCCCCCACAAGGCAGAGCTCTC...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACAGGGTCCTAGGACCTaGTCTGTCTATGCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEQGPRT*SVYALG
Trigger: TCCTAAAGCATAGACAGATCAGGTCCTAGGACCCTG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAAAAGCCAGAAAGGAGTaGATCTCCAGGAAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSIKARKE*ISRKGR
Trigger: CCGCCCCTTCCTGGAGATGCACTCCTTTCTGGCTTT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGATATTTATACAACCTTaGCATCAGAATTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLIFIQP*HQNWED
Trigger: GTCTTCCCAATTCTGATGGCAAGGTTGTATAAATAT...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACCCCACTTCCACTTATaGTTTGGTTCAGGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEPHFHL*FGSGVA
Trigger: GGCTACTCCTGAACCAAAGCATAAGTGGAAGTGGGG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAAAGTGCCTCATAGGTTaGCTTTGTGTGGGCCCTACT +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEKCLIG*LCVGPT
Trigger: AGTAGGGCCCACACAAAGGCAACCTATGAGGCACTT...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACCAAAGGGACTAGAGTaGCATGTCTCAAAAGATACT +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAPKGLE*HVSKDT
Trigger: AGTATCTTTTGAGACATGCCACTCTAGTCCCTTTGG...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTTTAGTCCAAAGCTATaGCGATCCAAACAATGTGGT +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHFSPKL*RSKQCG
Trigger: ACCACATTGTTTGGATCGCCATAGCTTTGGACTAAA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACAAAATCTTATCTGGTaGAATGAGTCTCTGAGATTA +
Preference number: 4 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVQNLIW*NESLRL
Trigger: TAATCTCAGAGACTCATTCCACCAGATAAGATTTTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACGATGTCTCAAGGCAATaGAAGAATTTAGCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHDVSRQ*KNLASR
Trigger: TCTAGAAGCTAAATTCTTTCATTGCCTTGAGACATC...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTCAAGAAAACATCCATaGTCTCCAAAATGCACACAA +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHSRKHP*SPKCTQ
Trigger: TTGTGTGCATTTTGGAGATCATGGATGTTTTCTTGA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCATCTTATCTGGTGGAATaGGTCTCTGAGATTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGASYLVE*VSEISF
Trigger: AAAGCTAATCTCAGAGACTCATTCCACCAGATAAGA...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAAGGAGTCCCTCTCCATaGCAAAACCCCCATCATCTC +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSIRSPSP*QNPHHL
Trigger: GAGATGATGGGGGTTTTGGCATGGAGAGGGACTCCT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCAGCTGGGTCTTGACTaGAATGAAAGGTTATTTTTA +
Preference number: 4 (lower is better)
Translates to: DNSTETGLDVRINEGTSHQLGLD*NERLFL
Trigger: TAAAAATAACCTTTCATTCCAGTCAAGACCCAGCTG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAATTAGCAAAGACCAGTaGCTGCCTCTTTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEISKDQ*LPLLSA
Trigger: GGCACTCAAAAGAGGCAGCCACTGGTCTTTGCTAAT...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGAAGTCACATCACGTCTaGCTTCTTCCCAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLKSHHV*LLPKGA
Trigger: TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTT...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAATCCCACTTCCCCTTTTaGTGTTTCTTCACACACACA +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAESHFPF*CFFTHT
Trigger: TGTGTGTGTGAAGAAACAGCAAAAGGGGAAGTGGGA...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCATCCCTTCAGAGAATATaGTTTCTTCTTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGASLQRI*FLLQFP
Trigger: AGGAAACTGAAGAAGAAAGCATATTCTCTGAAGGGA...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAAAAGCTACATTCTCCTaGCTTCTCAGAAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEKATFS*LLRRLV
Trigger: GACTAGCCTTCTGAGAAGGCAGGAGAATGTAGCTTT...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAAGCGCGTCCTGTGGTTaGCTCTCATCCAAAATTGTC +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSISASCG*LSSKIV
Trigger: GACAATTTTGGATGAGAGCCAACCACAGGACGCGCT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCAAACCAAAATCTTATCTaGTGGAATGAGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGANQNLI*WNESLR
Trigger: TCTCAGAGACTCATTCCACCAGATAAGATTTTGGTT...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAATTAGGAAGAAGCCTCTaGCAGCTCTGCATTAAAGGA +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAELGRSL*QLCIKG
Trigger: TCCTTTAATGCAGAGCTGCCAGAGGCTTCTTCCTAA...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 72 bp GGAGGCATATTCACTGTATTACGCTCCACCCTTTACTaGATGTTTTGCATCAAATGTAGTCCACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GGIFTVLRSTLY*MFCIKCSPQQA
Trigger: TGCCTGCTGTGGACTACATTTGATGCAAAACATCAAGTAAAGGGTGGAGCGTAATACAGTGAATATGCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACTTTACTTGATGTTTTaGATCAAATGTAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: LLSACAKSHHVCLLPKGALYLMF*IKCSPQ
Trigger: CTGTGGACTACATTTGATGCAAAACATCAAGTAAAG...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCACTGTAACCTCAAATaGCTGGACTCAAGTGATCCT +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLHCNLK*LDSSDP
Trigger: AGGATCACTTGAGTCCAGGCATTTGAGGTTACAGTG...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCCCACAGAAGAAAAGTaGCTCATAGGTTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLPTEEK*LIGCLC
Trigger: ACAAAGGCAACCTATGAGGCACTTTTCTTCTGTGGG...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACTTGAGATCGGTACATaGAAGAGGCATGTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAELEIGT*KRHVSN
Trigger: GTTACTTACATGCCTCTTCCATGTACCGATCTCAAG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAAAAACATGCACCACTTaGGACTCTGCCGTGGTTTAC +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSIKTCTT*DSAVVY
Trigger: GTAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGAAAGAGGAATGGAGTTaGAGCAGGAAAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLKEEWS*SRKGFQ
Trigger: CTGGAATCCTTTCCTGCTCCAACTCCATTCCTCTTT...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAAGGCCATACTCTCTTTaGCAAGGCAATAAAACTAGA +
Preference number: 4 (lower is better)
Translates to: TNENKKGKHTQHGNEEAERPYSL*QGNKTR
Trigger: TCTAGTTTTATTGCCTTGTCAAAGAGAGTATGGCCT...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAACTGTCCCAACCTGTTaGTCTGGTGGTTTTACATTC +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSITVPTC*SGGFTF
Trigger: GAATGTAAAACCACCAGAGCAACAGGTTGGGACAGT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGAGAATTATTTTCTCTTaGCACCCACGGGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLRIIFS*HPRVTK
Trigger: TTTGGTGACCCGTGGGTGCCAAGAGAAAATAATTCT...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR TCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAAAGAGAGTAGGGCACTaGACAATTCCACTTCAAACA +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSIKRVGH*TIPLQT
Trigger: TGTTTGAAGTGGAATTGTTCAGTGCCCTACTCTCTT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATACTGTGTAACCTACTGTaGAATAAGCAAGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSILCNLL*NKQEKG
Trigger: CCCTTTCTCTTGCTTATTGCACAGTAGGTTACACAG...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR GCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAAGCCTCTGGCAGCTCTaGATTAAAGGAATACGAAAA +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSISLWQL*IKGIRK
Trigger: TTTTCGTATTCCTTTAATGCAGAGCTGCCAGAGGCT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAGGGCTACTAGGTGTATaGCAAAAATGGGATTTCATA +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSIGLLGV*QKWDFI
Trigger: TATGAAATCCCATTTTTGCCATACACCTAGTAGCCC...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CCA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATATATATACTGTTTCTTTaGGGAAGCCATGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: SASTKAINKELRVCLFSIYILFL*GSHVLR
Trigger: TCTGAGTACATGGCTTCCCCAAAGAAACAGTATATA...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
3UTR CAA 72 bp AAATATACATGGACATTGATCTTGCAAGCTTCTAGTTaGCAAGTGCTTCAAAATCTAGTGATGTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: KYTWTLILQASS*QVLQNLVMSQG
Trigger: GCCTTGAGACATCACTAGATTTTGAAGCACTTGCAAACTAGAAGCTTGCAAGATCAATGTCCATGTATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS GCA 90 bp TCCTGCAGTGCTGTGGTCAGCCGTGCATTGCTCTCCCGAAGGGTCTaGAGCTCGATCTCCCACTTCTTCACGTTGGCTGCGCTCTGCGTC +
Preference number: 5 (lower is better)
Translates to: SCSAVVSRALLSRRV*SSISHFFTLAALCV
Trigger: GACGCAGAGCGCAGCCAACGTGAAGAAGTGGGAGATCGAGCTGCAGACCCTTCGGGAGAGCAATGCACGGCTGACCACAGCACTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304231.12
ENST00000450735.7
ENST00000558817.1
ENST00000561345.5
CDS-3UTR CAA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGGAACACCGTCCAGGTaGCTCCAGGGCCAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTGTPSR*LQGQGG
Trigger: CCCGCCCTGGCCCTGGAGCAACCTGGACGGTGTTCC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS GCA 90 bp GAGAGAAGAGCCAGGGAGCTCTGGCAATGCAAGGGCCTGGGAAGCTaGAGCTGCTGGGAACGGGTGGGGAGTCAATCATCAAACAATCCA +
Preference number: 5 (lower is better)
Translates to: ERRARELWQCKGLGS*SCWERVGSQSSNNP
Trigger: TGGATTGTTTGATGATTGACTCCCCACCCGTTCCCAGCAGCTGCAGCTTCCCAGGCCCTTGCATTGCCAGAGCTCCCTGGCTCTTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS GCA 90 bp CATGCAGCTCCATCATGGGGCTGCCTGCACCGCTTGCATGGGACCTaGTTTGCACATGATGCCTTACCAGAGGCATCTTACCAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: HAAPSWGCLHRLHGT*FAHDALPEASYQQS
Trigger: GCTCTGCTGGTAAGATGCCTCTGGTAAGGCATCATGTGCAAAGCAGGTCCCATGCAAGCGGTGCAGGCAGCCCCATGATGGAGCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS-3UTR CAA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGACCTTGCCATCAGAATaGGGAAGACCTCGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLTLPSE*GRPRRA
Trigger: AGCCCGGCGAGGTCTTCCCAATTCTGATGGCAAGGT...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCCCCTGTTCCTTGGCTaGTGGCCCCTTCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: DNSTETGLDVRINEGTSHPLFLG*WPLPPP
Trigger: AGGTGGAGGAAGGGGCCACAAGCCAAGGAACAGGGG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCAGCCCAGGAGAACACTTaGCCGCAAGGCTCTGCACCG +
Preference number: 5 (lower is better)
Translates to: LLSACAKSHHVCLLPKGAAQENT*PQGSAP
Trigger: CGGTGCAGAGCCTTGCGGCAAAGTGTTCTCCTGGGC...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGCTGGGACATCAGCATTaGCTGAGGGAAGGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLLGHQH*LREGKA
Trigger: TGCCTTCCCTTCCCTCAGCAAATGCTGATGTCCCAG...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTATGAGAGCTCTGCCTaGTGGGGGAGCCTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVYESSA*WGSLQN
Trigger: ATTTTGGAGGCTCCCCCACAAGGCAGAGCTCTCATA...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS GCA 90 bp TTCTTTGTGGCTATGAACAAACCCCATGCAGCTCCATCATGGGGCTaGCTGCACCGCTTGCATGGGACCTGCTTTGCACATGATGCCTTA +
Preference number: 5 (lower is better)
Translates to: FFVAMNKPHAAPSWG*LHRLHGTCFAHDAL
Trigger: TAAGGCATCATGTGCAAAGCAGGTCCCATGCAAGCGGTGCAGGCAGCCCCATGATGGAGCTGCATGGGGTTTGTTCATAGCCACAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS-3UTR CAA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGGCCTCCCACTTGTTTaGAACATACTGCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTGLPLV*NILLCL
Trigger: GAGGCAGAGCAGTATGTTCAAAACAAGTGGGAGGCC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACAAAACATGCACCACTaGGGACTCTGCCGTGGTTTA +
Preference number: 5 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVQNMHH*GLCRGL
Trigger: TAAACCACGGCAGAGTCCCAAGTGGTGCATGTTTTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTCCCTAAGCATGGGGTaGCCCCAAAGCAAGAACCAG +
Preference number: 5 (lower is better)
Translates to: DNSTETGLDVRINEGTSHSLSMG*PQSKNQ
Trigger: CTGGTTCTTGCTTTGGGGCAACCCCATGCTTAGGGA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTAGCATCCAGCTGGGTCTaGACTGGAATGAAAGGTTAT +
Preference number: 5 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVASSWV*TGMKGY
Trigger: ATAACCTTTCATTCCAGTCAAGACCCAGCTGGATGC...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACAAAGTGCCTCATAGGTaGCCTTTGTGTGGGCCCTAC +
Preference number: 5 (lower is better)
Translates to: DNSTETGLDVRINEGTSHKVPHR*PLCGPY
Trigger: GTAGGGCCCACACAAAGGCAACCTATGAGGCACTTT...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACCCGTGCAAACACACATaGGGCTTATCTAGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: DNSTETGLDVRINEGTSHPCKHT*GLSSSP
Trigger: GGGACTGCTAGATAAGCCCAATGTGTGTTTGCACGG...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCCAGCTGCTCTGCAGATaGTCCTTAGAAAAATGCTAC +
Preference number: 5 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVQLLCR*SLEKCY
Trigger: GTAGCATTTTTCTAAGGACAATCTGCAGAGCAGCTG...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS CCA 90 bp AAGATTTTCTTTGTGGCTATGAACAAACCCCATGCAGCTCCATCATaGGGCTGCCTGCACCGCTTGCATGGGACCTGCTTTGCACATGAT +
Preference number: 5 (lower is better)
Translates to: KIFFVAMNKPHAAPS*GCLHRLHGTCFAHD
Trigger: ATCATGTGCAAAGCAGGTCCCATGCAAGCGGTGCAGGCAGCCCCATGATGGAGCTGCATGGGGTTTGTTCATAGCCACAAAGAAAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS-3UTR CAA 90 bp GCTGAGGGAAGGGAAGGCAGACACTGCGGAACTGCTCATGGGCATTTCAGTGTCTGTGCTCACATTTCATaGGCCAGAATTAGTCATAGG +
Preference number: 5 (lower is better)
Translates to: AEGREGRHCGTAHGHFSVCAHIS*ARISHR
Trigger: CCTATGACTAATTCTGGCCAATGAAATGTGAGCACA...GACACTGAAATGCCCATGAGCAGTTCCGCAGTGTCTGCCTTCCCTTCCCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACTCAGGGATCCAGGCTaGACAGAGGCTCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: TNENKKGKHTQHGNEEAELRDPG*TEALSL
Trigger: CAGGGACAGAGCCTCTGTCAAGCCTGGATCCCTGAG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS CCA 90 bp ATTCTGAGGCCTCAGGGAGTTAGTGGAGATTTTGAAGTAGGAGGGTaGCATGATCAGACTTGTGTCTTAGCTTCTCTGGCAGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: ILRPQGVSGDFEVGG*HDQTCVLASLAADG
Trigger: CCCATCTGCTGCCAGAGAAGCTAAGACACAAGTCTGATCATGCCACCCTCCTACTTCAAAATCTCCACTAACTCCCTGAGGCCTCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CCA 90 bp TTGCTGAACATCCCACAAGACATGGGCAAGACTCTTGGAAGTAGCTaGATACTGACGACTGAAGCTGGAGCAGAGAGGGGGTATGTTTCT +
Preference number: 5 (lower is better)
Translates to: LLNIPQDMGKTLGSS*ILTTEAGAERGYVS
Trigger: AGAAACATACCCCCTCTCTGCTCCAGCTTCAGTCGTCAGTATCCAGCTACTTCCAAGAGTCTTGCCCATGTCTTGTGGGATGTTCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619240.1
CDS-3UTR CAA 90 bp CCCAGGCAGGCAGAGCCAAGTACAGCTTCATGGAGATTCCTACAGCACAGAACAGGCTCTCATCCAAAATaGTCCCTGGTTTCTATAGAG +
Preference number: 5 (lower is better)
Translates to: PRQAEPSTASWRFLQHRTGSHPK*SLVSIE
Trigger: CTCTATAGAAACCAGGGACAATTTTGGATGAGAGCC...TGTTCTGTGCTGTAGGAATCTCCATGAAGCTGTACTTGGCTCTGCCTGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAACACATGAGAATCGCTaGAACCCGGGAGGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: TNENKKGKHTQHGNEEAETHENR*NPGGAG
Trigger: ACCTGCGCCTCCCGGGTTCAAGCGATTCTCATGTGT...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCAGAGTCTCGCTCCGTaGCCCAGGCTGGTGCTATCT +
Preference number: 5 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLQSLAP*PRLVLS
Trigger: AGATAGCACCAGCCTGGGCAACGGAGCGAGACTCTG...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp TCTCGGCAATGCAAACAGCATCGGTGGCAGCCACAGAATTATTTCCACTCAGTGACCACTCCTACACATTaGGGAAAAGCCGGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: SRQCKQHRWQPQNYFHSVTTPTH*GKAGSV
Trigger: CACAGAACCGGCTTTTCCCAAATGTGTAGGAGTGGT...CACTGAGTGGAAATAATTCTGTGGCTGCCACCGATGCTGTTTGCATTGCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS GCA 90 bp TTACCAGAGGCATCTTACCAGCAGAGCCAAATAAGTAATAAAGCCTaGCTTCAAGATGCTCTGGGCTTCTGGTTTCCTCTCATGGCCGTG +
Preference number: 5 (lower is better)
Translates to: LPEASYQQSQISNKA*LQDALGFWFPLMAV
Trigger: CACGGCCATGAGAGGAAACCAGAAGCCCAGAGCATCTTGAAGGCAGGCTTTATTACTTATTTGGCTCTGCTGGTAAGATGCCTCTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS-3UTR CAA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTACTGTCCCAACCTGTaGCTCTGGTGGTTTTACATT +
Preference number: 5 (lower is better)
Translates to: DNSTETGLDVRINEGTSHYCPNL*LWWFYI
Trigger: AATGTAAAACCACCAGAGCAACAGGTTGGGACAGTA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp GTCCTGTATGCCTCAGAAGGAAAGGAGCCGCAGATAGGGAGGCGCGTACTTTTGAGAAAACCCATATTCTaGAGATCGGTACATGGAAGA +
Preference number: 5 (lower is better)
Translates to: VLYASEGKEPQIGRRVLLRKPIF*RSVHGR
Trigger: TCTTCCATGTACCGATCTCAAGAATATGGGTTTTCT...CAAAAGTACGCGCCTCCCTATCTGCGGCTCCTTTCCTTCTGAGGCATACAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp CTGCAATGGAGCAGCTCACCCCTCCACTGGAACAGAGCAGATCTGGGGAAAGTACAAAATGCACACAAATaGTACAGGCCATACTCTCTT +
Preference number: 5 (lower is better)
Translates to: LQWSSSPLHWNRADLGKVQNAHK*YRPYSL
Trigger: AAGAGAGTATGGCCTGTACAATTTGTGTGCATTTTG...TACTTTCCCCAGATCTGCTCTGTTCCAGTGGAGGGGTGAGCTGCTCCATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS GCA 90 bp AAAACCACATACAAAACGGACTACGGAAATCTTACTACCGAGGCTTaGCCAGGCAGGAGAGAAAGGTGTAGCATCCCTGAAGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: KTTYKTDYGNLTTEA*PGRRERCSIPEVIS
Trigger: ACTGATGACTTCAGGGATGCTACACCTTTCTCTCCTGCCTGGGCAAGCCTCGGTAGTAAGATTTCCGTAGTCCGTTTTGTATGTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619240.1
CDS-3UTR CAA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAACAGTGGCTGCCTCTTTaGAGTGCCTGTGCTAAGTCA +
Preference number: 5 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEQWLPL*SACAKS
Trigger: TGACTTAGCACAGGCACTCAAAAGAGGCAGCCACTG...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAATTCCACTCAGTGGTCTaGACTCCCGTGCAAACACAC +
Preference number: 5 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEFHSVV*TPVQTH
Trigger: GTGTGTTTGCACGGGAGTCAAGACCACTGAGTGGAA...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS TCA 90 bp CCTGCCTTCAAGATGCTCTGGGCTTCTGGTTTCCTCTCATGGCCGTaGAGAAGTAGATTCAGATTTGCTTTAAGGATCCATCACAAGCAA +
Preference number: 5 (lower is better)
Translates to: PAFKMLWASGFLSWP*RSRFRFALRIHHKQ
Trigger: TTGCTTGTGATGGATCCTTAAAGCAAATCTGAATCTACTTCTTCACGGCCATGAGAGGAAACCAGAAGCCCAGAGCATCTTGAAGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS-3UTR CAA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCAGCGCGTCCTGTGGTaGGCTCTCATCCAAAATTGT +
Preference number: 5 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLQRVLW*ALIQNC
Trigger: ACAATTTTGGATGAGAGCCAACCACAGGACGCGCTG...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATATGGCGACCCAAAGTGTaGGGATTACAGGCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SASTKAINKELRVCLFSIWRPKV*GLQARA
Trigger: GGCTCTTGCCTGTAATCCCAACACTTTGGGTCGCCA...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp CTTTTGAGTGCCTGTGCTAAGTCACATCACGTCTGCCTTCTTCCCAAAGGTGCACTGATGAATATGCTGTaGACTTTTTCTGGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLSACAKSHHVCLLPKGALMNML*TFSGGK
Trigger: CTTTCCCCCAGAAAAAGTCAACAGCATATTCATCAG...TGCACCTTTGGGAAGAAGGCAGACGTGATGTGACTTAGCACAGGCACTCAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp GACAACAGTACTGAGACTGGGCTGGATGTCAGAATAAACGAGGGCACGTCACACTTGCAAGCTTCTAGTTaGCAAGTGCTTCAAAATCTA +
Preference number: 5 (lower is better)
Translates to: DNSTETGLDVRINEGTSHLQASS*QVLQNL
Trigger: TAGATTTTGAAGCACTTGCAAACTAGAAGCTTGCAA...GTGTGACGTGCCCTCGTTTATTCTGACATCCAGCCCAGTCTCAGTACTGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS TCA 90 bp GAAGAGGCCAAGCTTTGTCGGGATATTAAGTGTTTATACATTTGCTaGACATCCCACAAGACATGGGCAAGACTCTTGGAAGTAGCTGGA +
Preference number: 5 (lower is better)
Translates to: EEAKLCRDIKCLYIC*TSHKTWARLLEVAG
Trigger: TCCAGCTACTTCCAAGAGTCTTGCCCATGTCTTGTGGGATGTTCAGCAAATGTATAAACACTTAATATCCCGACAAAGCTTGGCCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619240.1
CDS-3UTR CAA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGCACAAGTTCGAGGTCTaGTGTGGATACTGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLHKFEV*CGYWFS
Trigger: AGAGAACCAGTATCCACACAAGACCTCGAACTTGTG...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp ACCAATGAGAACAAAAAGGGAAAGCACACGCAACATGGGAATGAGGAAGCAGAAAAGCCGGTTCTGTGTTaGATACAGACTTTGCCATGT +
Preference number: 5 (lower is better)
Translates to: TNENKKGKHTQHGNEEAEKPVLC*IQTLPC
Trigger: ACATGGCAAAGTCTGTATCAAACACAGAACCGGCTT...TTCTGCTTCCTCATTCCCATGTTGCGTGTGCTTTCCCTTTTTGTTCTCATTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATACCTCCCCTTAACATGTaGGAATATGTAAGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SASTKAINKELRVCLFSIPPLNM*EYVSSP
Trigger: TGGGGAGCTTACATATTCCAACATGTTAAGGGGAGG...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAGCTAAAATCAAGGTGTaGACAGGGCTGTGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SASTKAINKELRVCLFSIAKIKV*TGLCSL
Trigger: AAGAGAACACAGCCCTGTCAACACCTTGATTTTAGC...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATACGCTCCACCCTTTACTaGATGTTTTGCATCAAATGT +
Preference number: 5 (lower is better)
Translates to: SASTKAINKELRVCLFSIRSTLY*MFCIKC
Trigger: ACATTTGATGCAAAACATCAAGTAAAGGGTGGAGCG...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp AGGATGAATGGAACAAACAATCCACTTCTGGATATTAGCAAAGACCAGTGGCTGACATGGACATTGATCTaGCAAGCTTCTAGTTTGCAA +
Preference number: 5 (lower is better)
Translates to: RMNGTNNPLLDISKDQWLTWTLI*QASSLQ
Trigger: TTGCAAACTAGAAGCTTGCAAGATCAATGTCCATGT...CAGCCACTGGTCTTTGCTAATATCCAGAAGTGGATTGTTTGTTCCATTCATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS-3UTR CAA 90 bp TCTGCCTCCACTAAAGCCATCAATAAAGAACTCAGGGTGTGTTTGTTTTCCATAATATATACTGTTTCTTaGGGGAAGCCATGTACTCAG +
Preference number: 5 (lower is better)
Translates to: SASTKAINKELRVCLFSIIYTVS*GKPCTQ
Trigger: CTGAGTACATGGCTTCCCCAAAGAAACAGTATATAT...TATGGAAAACAAACACACCCTGAGTTCTTTATTGATGGCTTTAGTGGAGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558090.2
CDS CAA 90 bp GCCAAAGTCTCCGAACTAAGCCTCGCCGTGTCTGACTGCCCTGCCTaGGGGCACAGGCCGATTCCTGAGCCCATCACTGTGGCCAGGGGA +
Preference number: 6 (lower is better)
Translates to: AKVSELSLAVSDCPA*GHRPIPEPITVARG
Trigger: TCCCCTGGCCACAGTGATGGGCTCAGGAATCGGCCTGTGCCCCAAGGCAGGGCAGTCAGACACGGCGAGGCTTAGTTCGGAGACTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CAA 72 bp TCCGAACTAAGCCTCGCCGTGTCTGACTGCCCTGCCTaGGGGCACAGGCCGATTCCTGAGCCCATCACTGTG +
Preference number: 6 (lower is better)
Translates to: SELSLAVSDCPA*GHRPIPEPITV
Trigger: CACAGTGATGGGCTCAGGAATCGGCCTGTGCCCCAAGGCAGGGCAGTCAGACACGGCGAGGCTTAGTTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS GCA 72 bp GCTGTGGTCAGCCGTGCATTGCTCTCCCGAAGGGTCTaGAGCTCGATCTCCCACTTCTTCACGTTGGCTGCG +
Preference number: 6 (lower is better)
Translates to: AVVSRALLSRRV*SSISHFFTLAA
Trigger: CGCAGCCAACGTGAAGAAGTGGGAGATCGAGCTGCAGACCCTTCGGGAGAGCAATGCACGGCTGACCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304231.12
ENST00000450735.7
ENST00000558817.1
ENST00000561345.5
CDS GCA 72 bp CGGAGCCGGTCATTCTCATCACGGCAGATGGAGAACTaGCTCTTCCACTGCTCCACACTGGCTGCCGACTCC +
Preference number: 6 (lower is better)
Translates to: RSRSFSSRQMEN*LFHCSTLAADS
Trigger: GGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGCAGTTCTCCATCTGCCGTGATGAGAATGACCGGCTCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304231.12
ENST00000450735.7
ENST00000558817.1
CDS GCA 72 bp CCCATGCAGCTCCATCATGGGGCTGCCTGCACCGCTTaGATGGGACCTGCTTTGCACATGATGCCTTACCAG +
Preference number: 6 (lower is better)
Translates to: PMQLHHGAACTA*MGPALHMMPYQ
Trigger: CTGGTAAGGCATCATGTGCAAAGCAGGTCCCATGCAAGCGGTGCAGGCAGCCCCATGATGGAGCTGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS CAA 72 bp CCCCATGCAGCTCCATCATGGGGCTGCCTGCACCGCTaGCATGGGACCTGCTTTGCACATGATGCCTTACCA +
Preference number: 6 (lower is better)
Translates to: PHAAPSWGCLHR*HGTCFAHDALP
Trigger: TGGTAAGGCATCATGTGCAAAGCAGGTCCCATGCAAGCGGTGCAGGCAGCCCCATGATGGAGCTGCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS CCA 72 bp TGGCCAGGGGAATGGAATGTCCTGATTGGCTCAGTCTaGGCTGAGGTGTGGAGGCAGCTTCTCACAGAAGGC +
Preference number: 6 (lower is better)
Translates to: WPGEWNVLIGSV*AEVWRQLLTEG
Trigger: GCCTTCTGTGAGAAGCTGCCTCCACACCTCAGCCCAGACTGAGCCAATCAGGACATTCCATTCCCCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CAA 90 bp CAGCTCCATCATGGGGCTGCCTGCACCGCTTGCATGGGACCTGCTTaGCACATGATGCCTTACCAGAGGCATCTTACCAGCAGAGCCAAA +
Preference number: 6 (lower is better)
Translates to: QLHHGAACTACMGPA*HMMPYQRHLTSRAK
Trigger: TTTGGCTCTGCTGGTAAGATGCCTCTGGTAAGGCATCATGTGCAAAGCAGGTCCCATGCAAGCGGTGCAGGCAGCCCCATGATGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS GCA 72 bp GCTATGAACAAACCCCATGCAGCTCCATCATGGGGCTaGCTGCACCGCTTGCATGGGACCTGCTTTGCACAT +
Preference number: 6 (lower is better)
Translates to: AMNKPHAAPSWG*LHRLHGTCFAH
Trigger: ATGTGCAAAGCAGGTCCCATGCAAGCGGTGCAGGCAGCCCCATGATGGAGCTGCATGGGGTTTGTTCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS CAA 72 bp GTGCATGGAGGGCATCATCCACCTTTAGACAGCTACTaGCCCACACCTCATCGAGCTCTGGGCGTTGTGCCA +
Preference number: 6 (lower is better)
Translates to: VHGGHHPPLDSY*PTPHRALGVVP
Trigger: TGGCACAACGCCCAGAGCTCGATGAGGTGTGGGCAAGTAGCTGTCTAAAGGTGGATGATGCCCTCCATGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560374.5
CDS CAA 90 bp ATGAACAAACCCCATGCAGCTCCATCATGGGGCTGCCTGCACCGCTaGCATGGGACCTGCTTTGCACATGATGCCTTACCAGAGGCATCT +
Preference number: 6 (lower is better)
Translates to: MNKPHAAPSWGCLHR*HGTCFAHDALPEAS
Trigger: AGATGCCTCTGGTAAGGCATCATGTGCAAAGCAGGTCCCATGCAAGCGGTGCAGGCAGCCCCATGATGGAGCTGCATGGGGTTTGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS CCA 72 bp TTTGTGGCTATGAACAAACCCCATGCAGCTCCATCATaGGGCTGCCTGCACCGCTTGCATGGGACCTGCTTT +
Preference number: 6 (lower is better)
Translates to: FVAMNKPHAAPS*GCLHRLHGTCF
Trigger: AAAGCAGGTCCCATGCAAGCGGTGCAGGCAGCCCCATGATGGAGCTGCATGGGGTTTGTTCATAGCCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS TCA 72 bp GGGTGGGGAGTCAATCATCAAACAATCCAACAACCTTaGGGAGAGGACTTTGGACCTCACTGGCTGCCTCCC +
Preference number: 6 (lower is better)
Translates to: GWGVNHQTIQQP*GEDFGPHWLPP
Trigger: GGGAGGCAGCCAGTGAGGTCCAAAGTCCTCTCCTCAAGGTTGTTGGATTGTTTGATGATTGACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CCA 72 bp ATCCCACAAGACATGGGCAAGACTCTTGGAAGTAGCTaGATACTGACGACTGAAGCTGGAGCAGAGAGGGGG +
Preference number: 6 (lower is better)
Translates to: IPQDMGKTLGSS*ILTTEAGAERG
Trigger: CCCCCTCTCTGCTCCAGCTTCAGTCGTCAGTATCCAGCTACTTCCAAGAGTCTTGCCCATGTCTTGTGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619240.1
CDS CAA 72 bp CGGGTGGGGAGTCAATCATCAAACAATCCAACAACCTaGAGGAGAGGACTTTGGACCTCACTGGCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: RVGSQSSNNPTT*RRGLWTSLAAS
Trigger: GGAGGCAGCCAGTGAGGTCCAAAGTCCTCTCCTCAAGGTTGTTGGATTGTTTGATGATTGACTCCCCACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CAA 90 bp AGGCTGAAAGTGCATGGAGGGCATCATCCACCTTTAGACAGCTACTaGCCCACACCTCATCGAGCTCTGGGCGTTGTGCCAGCATTTGAA +
Preference number: 6 (lower is better)
Translates to: RLKVHGGHHPPLDSY*PTPHRALGVVPAFE
Trigger: TTCAAATGCTGGCACAACGCCCAGAGCTCGATGAGGTGTGGGCAAGTAGCTGTCTAAAGGTGGATGATGCCCTCCATGCACTTTCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560374.5
CDS TCA 72 bp GTTCTCTCATCGAGCTCTGGGCGTTGTGCCAGCATTTaGAGAAGCGATCTGTTGCAAAGCGATCCACACGGA +
Preference number: 6 (lower is better)
Translates to: VLSSSSGRCASI*RSDLLQSDPHG
Trigger: TCCGTGTGGATCGCTTTGCAACAGATCGCTTCTTCAAATGCTGGCACAACGCCCAGAGCTCGATGAGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619367.1
CDS CCA 72 bp CCACTAGACTATGGTCTTCAAGGGCAGGGTCCCTCCTaGGTTTTTCTTGTTCTGTTTGGCTCCATCCTCAGG +
Preference number: 6 (lower is better)
Translates to: PLDYGLQGQGPS*VFLVLFGSILR
Trigger: CCTGAGGATGGAGCCAAACAGAACAAGAAAAACCCAGGAGGGACCCTGCCCTTGAAGACCATAGTCTAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CAA 72 bp CAGTGTGGTAGGAAGTGGCCAGGAACAAGAGGTAAGTaGGGACCACTCTGTGAAAGACCTCCGGGTCATGTT +
Preference number: 6 (lower is better)
Translates to: QCGRKWPGTRGK*GPLCERPPGHV
Trigger: AACATGACCCGGAGGTCTTTCACAGAGTGGTCCCAACTTACCTCTTGTTCCTGGCCACTTCCTACCACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CAA 72 bp TGTTCTCTCATCGAGCTCTGGGCGTTGTGCCAGCATTaGAAGAAGCGATCTGTTGCAAAGCGATCCACACGG +
Preference number: 6 (lower is better)
Translates to: CSLIELWALCQH*KKRSVAKRSTR
Trigger: CCGTGTGGATCGCTTTGCAACAGATCGCTTCTTCAAATGCTGGCACAACGCCCAGAGCTCGATGAGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619367.1
CDS CAA 90 bp GAGGCAGGAGAAGCTTGTCAGGAGGATCTTAGCAAGACTCCAAGATaGGGGAAGGACAGGAAATGTCTTAATCAGCCCCCAGTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: EAGEACQEDLSKTPR*GKDRKCLNQPPVRL
Trigger: CAGCCTCACTGGGGGCTGATTAAGACATTTCCTGTCCTTCCCCAATCTTGGAGTCTTGCTAAGATCCTCCTGACAAGCTTCTCCTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS GCA 72 bp AAGATGGGCTGTTCTCTCATCGAGCTCTGGGCGTTGTaGCAGCATTTGAAGAAGCGATCTGTTGCAAAGCGA +
Preference number: 6 (lower is better)
Translates to: KMGCSLIELWAL*QHLKKRSVAKR
Trigger: TCGCTTTGCAACAGATCGCTTCTTCAAATGCTGGCACAACGCCCAGAGCTCGATGAGAGAACAGCCCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619367.1
CDS CCA 72 bp ATGTCCATGTGCTTGGCTCAACAGTGTGGTAGGAAGTaGCCAGGAACAAGAGGTAAGTTGGGACCACTCTGT +
Preference number: 6 (lower is better)
Translates to: MSMCLAQQCGRK*PGTRGKLGPLC
Trigger: ACAGAGTGGTCCCAACTTACCTCTTGTTCCTGGCCACTTCCTACCACACTGTTGAGCCAAGCACATGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CAA 72 bp CCACTCTGTGAAAGACCTCCGGGTCATGTTAGGAGTTaGGACTTGATTCTGAGGCCTCAGGGAGTTAGTGGA +
Preference number: 6 (lower is better)
Translates to: PLCERPPGHVRS*DLILRPQGVSG
Trigger: TCCACTAACTCCCTGAGGCCTCAGAATCAAGTCCAAACTCCTAACATGACCCGGAGGTCTTTCACAGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CAA 72 bp GTGAAGATGGGCTGTTCTCTCATCGAGCTCTGGGCGTaGTGCCAGCATTTGAAGAAGCGATCTGTTGCAAAG +
Preference number: 6 (lower is better)
Translates to: VKMGCSLIELWA*CQHLKKRSVAK
Trigger: CTTTGCAACAGATCGCTTCTTCAAATGCTGGCACAACGCCCAGAGCTCGATGAGAGAACAGCCCATCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619367.1
CDS TCA 72 bp AAGACATGGGCAAGACTCTTGGAAGTAGCTGGATACTaGCGACTGAAGCTGGAGCAGAGAGGGGGTATGTTT +
Preference number: 6 (lower is better)
Translates to: KTWARLLEVAGY*RLKLEQRGGMF
Trigger: AAACATACCCCCTCTCTGCTCCAGCTTCAGTCGTCAGTATCCAGCTACTTCCAAGAGTCTTGCCCATGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619240.1
CDS TCA 72 bp GGTAGTTCCTGCAGAAGACTTCAAAAAGGGGATGTGTaGGTTGGGTCCTCAAGGATGTACAGGAGGGAAGAT +
Preference number: 6 (lower is better)
Translates to: GSSCRRLQKGDV*VGSSRMYRRED
Trigger: ATCTTCCCTCCTGTACATCCTTGAGGACCCAACTCACACATCCCCTTTTTGAAGTCTTCTGCAGGAACTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CAA 90 bp AAGTTGGGACCACTCTGTGAAAGACCTCCGGGTCATGTTAGGAGTTaGGACTTGATTCTGAGGCCTCAGGGAGTTAGTGGAGATTTTGAA +
Preference number: 6 (lower is better)
Translates to: KLGPLCERPPGHVRS*DLILRPQGVSGDFE
Trigger: TTCAAAATCTCCACTAACTCCCTGAGGCCTCAGAATCAAGTCCAAACTCCTAACATGACCCGGAGGTCTTTCACAGAGTGGTCCCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CCA 72 bp TTCCTGCAGAAGACTTCAAAAAGGGGATGTGTGAGTTaGGTCCTCAAGGATGTACAGGAGGGAAGATCATTT +
Preference number: 6 (lower is better)
Translates to: FLQKTSKRGCVS*VLKDVQEGRSF
Trigger: AAATGATCTTCCCTCCTGTACATCCTTGAGGACCCAACTCACACATCCCCTTTTTGAAGTCTTCTGCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000500334.1
CDS CCA 72 bp CAAGTTGGTTGTATTAACAAAAACGGGTGCATAGCCTaGGAAGTAATTTGGGAGGGAAGAGGCCAAGCTTTG +
Preference number: 6 (lower is better)
Translates to: QVGCINKNGCIA*EVIWEGRGQAL
Trigger: CAAAGCTTGGCCTCTTCCCTCCCAAATTACTTCCCAGGCTATGCACCCGTTTTTGTTAATACAACCAACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619240.1
CDS TCA 72 bp TTAAGGATCCATCACAAGCAAGGGCCAAGTGTCCCCTaGATTGATCTGCTTTTCTCCAGAATGACTGTTACA +
Preference number: 6 (lower is better)
Translates to: LRIHHKQGPSVP*IDLLFSRMTVT
Trigger: TGTAACAGTCATTCTGGAGAAAAGCAGATCAATTCAGGGGACACTTGGCCCTTGCTTGTGATGGATCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS TCA 72 bp AAGATGCTCTGGGCTTCTGGTTTCCTCTCATGGCCGTaGAGAAGTAGATTCAGATTTGCTTTAAGGATCCAT +
Preference number: 6 (lower is better)
Translates to: KMLWASGFLSWP*RSRFRFALRIH
Trigger: ATGGATCCTTAAAGCAAATCTGAATCTACTTCTTCACGGCCATGAGAGGAAACCAGAAGCCCAGAGCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558552.1
CDS TCA 72 bp AAGCTTTGTCGGGATATTAAGTGTTTATACATTTGCTaGACATCCCACAAGACATGGGCAAGACTCTTGGAA +
Preference number: 6 (lower is better)
Translates to: KLCRDIKCLYIC*TSHKTWARLLE
Trigger: TTCCAAGAGTCTTGCCCATGTCTTGTGGGATGTTCAGCAAATGTATAAACACTTAATATCCCGACAAAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619240.1