Pregenerated sensors for HOMER1 (Homo sapiens)
Ensembl gene IDs: ENSG00000152413Ensembl transcript IDs: ENST00000334082.11, ENST00000508576.5, ENST00000535690.1
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCATCAAACAAACTTTCCCCGACCTGCCTCCCATTCCAGTACTaGCAAAATCAGGACCACAAGGAGATAAATGACCGAAGTGTATAT | + |
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Preference number: 1 (lower is better) Translates to: LPSNKLSPTCLPFQY*QNQDHKEINDRSVY Trigger: ATATACACTTCGGTCATTTATCTCCTTGTGGTCCTGATTTTGTCAGTACTGGAATGGGAGGCAGGTCGGGGAAAGTTTGTTTGATGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR TCA 90 bp | CTAACTGCTTCCCAACAGTTCAATGACAGCAGAACATCAAATCTATaGTGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCAACT | + |
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Preference number: 1 (lower is better) Translates to: LTASQQFNDSRTSNL*WCWRSSIETRRDAT Trigger: AGTTGCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTTCTGCTGTCATTGAACTGTTGGGAAGCAGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR TCA 90 bp | AACAATTCAGAATATTGCCTTGTGAGGTTTGAATCAAGATGTGATTaGTGTGTAGAGCCAGATAGAGTACATGACTCCATCTCTATCTGC | + |
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Preference number: 1 (lower is better) Translates to: NNSEYCLVRFESRCD*CVEPDRVHDSISIC Trigger: GCAGATAGAGATGGAGTCATGTACTCTATCTGGCTCTACACATCAATCACATCTTGATTCAAACCTCACAAGGCAATATTCTGAATTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR GCA 90 bp | CAAATATCTTTCCATCCAGAATTTCTAAGAGTGTCTTCAGGTTATTaGGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGACGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: QISFHPEFLRVSSGY*EKLLVHSDFSPDVA Trigger: AGCAACGTCTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCTTAGAAATTCTGGATGGAAAGATATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
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| 3UTR TCA 90 bp | GCATATTCTGTAAATATACTTAACATTGCTAGACCAGCCTGTCAATaGCGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATTAGAA | + |
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Preference number: 1 (lower is better) Translates to: AYSVNILNIARPACQ*RAAVFQYCVSNLLE Trigger: TTCTAATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTCTAGCAATGTTAAGTATATTTACAGAATATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATGCTCTCTCTCACTCCTaGCAAGAATTAATTGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYALSHS*QELIGN Trigger: ATTACCAATTAATTCTTGCCAGGAGTGAGAGAGAGC...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCGAATCAAGATGTGATTaGTGTGTAGAGCCAGATAGA | + |
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Preference number: 2 (lower is better) Translates to: NIKSMMVLEIFYRDKERCESRCD*CVEPDR Trigger: TCTATCTGGCTCTACACATCAATCACATCTTGATTC...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCAGAATATTGCCTTGTaGGGTTTGAATCAAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: NIKSMMVLEIFYRDKERCQNIAL*GLNQDV Trigger: CACATCTTGATTCAAACCTCACAAGGCAATATTCTG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATTCATCACTAAGTTTTTaGACAAAACACAGCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYSSLSF*TKHSSR Trigger: TCTAGAGCTGTGTTTTGTGCAAAAACTTAGTGATGA...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCAAACAAGAAGTCAGTaGATTTATAGACTCCATAGA | + |
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Preference number: 2 (lower is better) Translates to: NIKSMMVLEIFYRDKERCQTRSQ*IYRLHR Trigger: TCTATGGAGTCTATAAATGCACTGACTTCTTGTTTG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR-3UTR CCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCAACTAGCTACAAGCTaGATTCTAAAATTTACAGTG | + |
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Preference number: 2 (lower is better) Translates to: NIKSMMVLEIFYRDKERCQLATS*ILKFTV Trigger: CACTGTAAATTTTAGAATCCAGCTTGTAGCTAGTTG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR-3UTR CCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCAGACTAGACAGCACTTaGCTTACTTTTAAAATAGCT | + |
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Preference number: 2 (lower is better) Translates to: NIKSMMVLEIFYRDKERCRLDST*LTFKIA Trigger: AGCTATTTTAAAAGTAAGCCAAGTGCTGTCTAGTCT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATATAATCTTCACTGTGTaGAACACAAAAAGGGGATGT | + |
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Preference number: 3 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYIIFTV*NTKRGC Trigger: ACATCCCCTTTTTGTGTTCAACACAGTGAAGATTAT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR TCA 72 bp | GTAAATATACTTAACATTGCTAGACCAGCCTGTCAATaGCGGGCTGCTGTATTTCAGTACTGTGTGTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: VNILNIARPACQ*RAAVFQYCVSN Trigger: ATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTCTAGCAATGTTAAGTATATTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR TCA 72 bp | GAATATTGCCTTGTGAGGTTTGAATCAAGATGTGATTaGTGTGTAGAGCCAGATAGAGTACATGACTCCATC | + |
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Preference number: 3 (lower is better) Translates to: EYCLVRFESRCD*CVEPDRVHDSI Trigger: GATGGAGTCATGTACTCTATCTGGCTCTACACATCAATCACATCTTGATTCAAACCTCACAAGGCAATATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTCAACATCACAGGCATaGTACAGCAAGAATATATGT | + |
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Preference number: 3 (lower is better) Translates to: NIKSMMVLEIFYRDKERCSTSQA*YSKNIC Trigger: ACATATATTCTTGCTGTACAATGCCTGTGATGTTGA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR GCA 72 bp | CAATTCGATCATTTTGGGGTACAAACAAGAAGTCAGTaGATTTATAGACTCCATAGAGTCAGTTACTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: QFDHFGVQTRSQ*IYRLHRVSYSS Trigger: GCTTGAGTAACTGACTCTATGGAGTCTATAAATGCACTGACTTCTTGTTTGTACCCCAAAATGATCGAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| 3UTR CCA 72 bp | TATATTTCAATTAAAGATACAGCTCTCTCTCACTCCTaGCAAGAATTAATTGGTAATGGCACTGCTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: YISIKDTALSHS*QELIGNGTASQ Trigger: CTGAGAAGCAGTGCCATTACCAATTAATTCTTGCCAGGAGTGAGAGAGAGCTGTATCTTTAATTGAAATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCGCCGGCCGGCCGGCTaGCAGAGAAGAGGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRRPAG*QRRGCC Trigger: GCAGCACCCTCTTCTCTGCCAGCCGGCCGGCCGGCG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCGCCGCCGAGCACAATaGAGCCCGGCTGGTGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRRRAQ*SPAGAR Trigger: CCGGGCACCAGCCGGGCTCCATTGTGCTCGGCGGCG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATGCCCCACGCTTCCACTaGCACCCTGCCCCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYAPRFH*HPAPSS Trigger: GGAGCTGGGGGCAGGGTGCCAGTGGAAGCGTGGGGC...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR TCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAGAGCACAGCGGGTCTaGGGCTCCCGTCGGCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRAQRV*GSRRRR Trigger: TCTCCGCCGACGGGAGCCTCAGACCCGCTGTGCTCT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATTGGGGCCAGGAGAGCTaGGCTCGAAGCCGAAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYWGQES*ARSRSA Trigger: TGCGCTTCGGCTTCGAGCCCAGCTCTCCTGGCCCCA...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAGGCTAAGCCCGCGTTaGGGCCAGGAGAGCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRLSPR*GQESWA Trigger: AGCCCAGCTCTCCTGGCCCCAACGCGGGCTTAGCCT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCGCACGCCGGAGAGCTaGAGGAGGGGACCCGATCCC | + |
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Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCRTPES*RRGPDP Trigger: GGGATCGGGTCCCCTCCTCCAGCTCTCCGGCGTGCG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCCAGGTCTCCGGGGGTaGAGCGAGCAACCAAACGCG | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYPGLRG*SEQPNA Trigger: CGCGTTTGGTTGCTCGCTCCACCCCCGGAGACCTGG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCATGGAGCCCGGCTGGTaGCCGGCCCTTCATTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCMEPGW*PALHSR Trigger: CCGCGAATGAAGGGCCGGGCACCAGCCGGGCTCCAT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATACAATGGAGCCCGGCTaGTGCCCGGCCCTTCATTCG | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYTMEPG*CPALHS Trigger: CGAATGAAGGGCCGGGCACCAGCCGGGCTCCATTGT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCAGAGAAGAGGGTGCTaGTTTCCCGGTCAGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCQRRGC*FPGQRR Trigger: GCGGCGCTGACCGGGAAAGCAGCACCCTCTTCTCTG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCCCTTCATTCGCGGCTaGCCCCTCTTCCCTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCPFIRG*PLFPPL Trigger: GAGAGGAGGGAAGAGGGGGCAGCCGCGAATGAAGGG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATGGAGCAGAGAAGAGGTaGGGAGGACGAAGAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYGAEKR*GGRREG Trigger: GCCTTCTCTTCGTCCTCCCCACCTCTTCTCTGCTCC...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR TCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCCCGTCGGCGGAGAATaGATGAATCACAGAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYPVGGE*MNHRAK Trigger: CTTGGCTCTGTGATTCATTCATTCTCCGCCGACGGG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR TCA 90 bp | TCCAGACGTTGCTCTAAGTCAGACAGTTGTCCCTCCAGGTCTTTGTTCCGAATTAATGGCAATGCATTCTaGGTTGGTTCAGCCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: SRRCSKSDSCPSRSLFRINGNAF*VGSALG Trigger: GCCAAGGGCTGAACCAACTCAGAATGCATTGCCATT...AATTCGGAACAAAGACCTGGAGGGACAACTGTCTGACTTAGAGCAACGTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508576.5 |
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| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTGGCAGAGAAGAGGGTaGTGCTTTCCCGGTCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCWQRRG*CFPGQR Trigger: GCGCTGACCGGGAAAGCAGCACCCTCTTCTCTGCCA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCGGCAGCTCGCAACCTaGACGGCACTCCACATTGGA | + |
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Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCRQLAT*TALHIG Trigger: TCCAATGTGGAGTGCCGTGCAGGTTGCGAGCTGCCG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATGTTTCACATTGGCAGTaGACTCCAGCAGGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYVSHWQ*TPAGLQ Trigger: CTGCAGCCCTGCTGGAGTCCACTGCCAATGTGAAAC...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR TCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAGACCAGCCTGTCAATaGCGGGCTGCTGTATTTCAG | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRPACQ*RAAVFQ Trigger: CTGAAATACAGCAGCCCGTCATTGACAGGCTGGTCT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATGACACAGTAACTGCATaGTTGCTGGTGGGTACCCAG | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYDTVTA*LLVGTQ Trigger: CTGGGTACCCACCAGCAAGCATGCAGTTACTGTGTC...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATTCAGTCACCCGCTTGTaGAGACGTTCTGCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYSVTRL*RRSASS Trigger: AGAGGAAGCAGAACGTCTGCACAAGCGGGTGACTGA...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTCGGCGGAGAATGAATaGATCACAGAGCCAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCSAENE*ITEPSP Trigger: GGGGCTTGGCTCTGTGATTCATTCATTCTCCGCCGA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCGGTGTTAAAGGAGACTaGAGATCCCCGCCTGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCGVKGD*RSPPAD Trigger: ATCCGCAGGCGGGGATCTTCAGTCTCCTTTAACACC...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR TCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAATGGCAATGCATTCTaGGTTGGTTCAGCCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYNGNAF*VGSALG Trigger: GCCAAGGGCTGAACCAACTCAGAATGCATTGCCATT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAAAATCTCCTCGAAGTaGAAACCCGGCAGCTCGCAA | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYKISSK*KPGSSQ Trigger: TTGCGAGCTGCCGGGTTTGCACTTCGAGGAGATTTT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCTTGTGCAGACGTTCTaGTTCCTCTTGATAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYLVQTF*FLLIGS Trigger: GCTGCCTATCAAGAGGAAGCAGAACGTCTGCACAAG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCGCCTGCGGATTCCTGTaGAGGTGTACTGGTAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCACGFL*RCTGKF Trigger: GAACTTACCAGTACACCTTCACAGGAATCCGCAGGC...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS-3UTR TCA 90 bp | AGAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGGTGTTAAAGGAGACTaGAGATCCCCGCCTGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: RVSSGYCEKLLVHSDFSPGVKGD*RSPPAD Trigger: ATCCGCAGGCGGGGATCTTCAGTCTCCTTTAACACC...TGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000508576.5 |
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| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCFSPWL*VLCHIR Trigger: CCTGATGTGACACAGAACTCAGAGCCAAGGGCTGAA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | GTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGACTTCAGCCCTTGGCTCTaGGTTCTGTGTCACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSGYCEKLLVHSDFSPDFSPWL*VLCHIR Trigger: CCTGATGTGACACAGAACTCAGAGCCAAGGGCTGAA...GTCTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGACGACACAGTAACTGCATaGTTGCTGGTGGGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSSGYCEKLLVHSDFSPDDTVTA*LLVGTQ Trigger: CTGGGTACCCACCAGCAAGCATGCAGTTACTGTGTC...GTCTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTCCATAAACGGTGTTTaGCCGGCTATCAGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCSINGV*PAISPL Trigger: CAGTGGGCTGATAGCCGGGCAAACACCGTTTATGGA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | TCCAGACGTTGCTCTAAGTCAGACAGTTGTCCCTCCAGGTCTTTGTTCCGAATTTTCACTTTCCTTAGCTaGATTCTAGTAGCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRRCSKSDSCPSRSLFRIFTFLS*ILVAWP Trigger: TGGCCAAGCTACTAGAATGCAGCTAAGGAAAGTGAA...AATTCGGAACAAAGACCTGGAGGGACAACTGTCTGACTTAGAGCAACGTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCTACAAGTAGGGAAATaGAGAATCCGGCTTCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYLQVGK*RIRLHR Trigger: TCGGTGAAGCCGGATTCTGCATTTCCCTACTTGTAG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCCAGCAGGGCTGCAGTaGGTTTGGCATTATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCPAGLQ*VWHYFL Trigger: AAGGAAATAATGCCAAACTCACTGCAGCCCTGCTGG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAGAGATGCAACTTCGTaGGCATGTTTTAGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRDATS*ACFSLQ Trigger: CTGCAGACTAAAACATGCTCACGAAGTTGCATCTCT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTCCATTGTTTCACATTaGCAGTGGACTCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCSIVSH*QWTPAG Trigger: CCCTGCTGGAGTCCACTGCCAATGTGAAACAATGGA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | TCCAGAATTTCTAAGAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCGCCTGCGGATTCCTGTaGAGGTGTACTGGTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRISKSVFRLLRKASCSFACGFL*RCTGKF Trigger: GAACTTACCAGTACACCTTCACAGGAATCCGCAGGC...GAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCTTAGAAATTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR TCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCCACAAGGAGATAAATaGCCGAAGTGTATATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYPQGDK*PKCICF Trigger: GAAGCATATACACTTCGGTCATTTATCTCCTTGTGG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCTCCCATTCCAGTACTaGCAAAATCAGGACCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCLPFQY*QNQDHK Trigger: CTTGTGGTCCTGATTTTGTCAGTACTGGAATGGGAG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCTTTTCTCCAGACGTTaGTCTAAGTCAGACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYLFSRR*SKSDSC Trigger: ACAACTGTCTGACTTAGAGCAACGTCTGGAGAAAAG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATTTATTCGAGTTAAAATaGTTTGCGGAGGAGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYLFELK*FAEETA Trigger: CGCTGTCTCCTCCGCAAAGCATTTTAACTCGAATAA...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAGAGACAAGGAGAGATaGAACTTCGTGAGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRDKER*NFVSMF Trigger: AAACATGCTCACGAAGTTGCATCTCTCCTTGTCTCT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCAACGCGACGTGCACGTaGATAAAAATCCCAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCNATCT*IKIPKA Trigger: TGCTTTTGGGATTTTTATTCACGTGCACGTCGCGTT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCATCATCTGTCCCGTTaGTACTTTCCGGTGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCHHLSR*YFPVLK Trigger: CTTTAACACCGGAAAGTATCAACGGGACAGATGATG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCAGAATATTGCCTTGTaGGGTTTGAATCAAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYQNIAL*GLNQDV Trigger: CACATCTTGATTCAAACCTCACAAGGCAATATTCTG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAGAACATCAAATCTATaGTGGTGCTGGAGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRTSNL*WCWRSS Trigger: AGAAGATCTCCAGCACCATCATAGATTTGATGTTCT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCATAAGACACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCIRHSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTGTCTTAT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | GAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGATAAGACACAGTAACTaGATGCTTGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ECLQVIAKSFLFILTFLQIRHSN*MLAGGY Trigger: GTACCCACCAGCAAGCATGCAGTTACTGTGTCTTAT...CTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAACAGAGGCGGCATTTaGTTATTCGAGTTAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYNRGGI*LFELKC Trigger: GCATTTTAACTCGAATAAGCAAATGCCGCCTCTGTT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAGGAATTTCTCCGTCTaGTATTTCGCAGTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRNFSV*YFAVAF Trigger: AAAAGCAACTGCGAAATAGCAGACGGAGAAATTCCT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCTGTCAATGACGGGCTaGTGTATTTCAGTACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCLSMTG*CISVLC Trigger: ACACAGTACTGAAATACAGCAGCCCGTCATTGACAG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATGACTCCATCTCTATCTaGCACGATCACAATTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYDSISI*HDHNLD Trigger: ATCTAAATTGTGATCGTGGCAGATAGAGATGGAGTC...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCACTTCCTGTAGTTTCTaGGTCAAAGAATCCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCTSCSF*VKESLC Trigger: ACAGAGGGATTCTTTGACTCAGAAACTACAGGAAGT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCCCCATTTTGCCCAATaGAAACTTGCTCTGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCPHFAQ*KLALKF Trigger: AAACTTCAGAGCAAGTTTTCATTGGGCAAAATGGGG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCCTCCCAATGTTTGCTaGTTGCTGAACTATGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCPPNVC*LLNYVK Trigger: TTTCACATAGTTCAGCAATCAGCAAACATTGGGAGG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTTCACTTTCCTTAGCTaGATTCTAGTAGCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCFTFLS*ILVAWP Trigger: TGGCCAAGCTACTAGAATGCAGCTAAGGAAAGTGAA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCACTGGCCAAACTTCTaGGATGTTTTAGTAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCHWPNF*DVLVNV Trigger: GACATTTACTAAAACATCTCAGAAGTTTGGCCAGTG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | GTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGACCACTGGCCAAACTTCTaGGATGTTTTAGTAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSGYCEKLLVHSDFSPDHWPNF*DVLVNV Trigger: GACATTTACTAAAACATCTCAGAAGTTTGGCCAGTG...GTCTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCATCATCTGTCCCGTTaGTACTTTCCGGTGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRVSSGYCEKLLVHSDFSHHLSR*YFPVLK Trigger: CTTTAACACCGGAAAGTATCAACGGGACAGATGATG...AGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR GCA 90 bp | AGAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCACTTTTCTCCAGACGTTaGTCTAAGTCAGACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSSGYCEKLLVHSDFSPLFSRR*SKSDSC Trigger: ACAACTGTCTGACTTAGAGCAACGTCTGGAGAAAAG...TGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAAGTTTCAGCTCTTATaGTACGGAATAACTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYKFQLL*YGITSK Trigger: TTTGGAAGTTATTCCGTAGCATAAGAGCTGAAACTT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTGCCCAATGAAAACTTaGTCTGAAGTTTCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCCPMKT*SEVSAL Trigger: AAGAGCTGAAACTTCAGAGCAAGTTTTCATTGGGCA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCAAACAAGAAGTCAGTaGATTTATAGACTCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYQTRSQ*IYRLHR Trigger: TCTATGGAGTCTATAAATGCACTGACTTCTTGTTTG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCAACTAGCTACAAGCTaGATTCTAAAATTTACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYQLATS*ILKFTV Trigger: CACTGTAAATTTTAGAATCCAGCTTGTAGCTAGTTG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CCA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATACAATTCGATCATTTTaGGGTACAAACAAGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYTIRSF*GTNKKS Trigger: TGACTTCTTGTTTGTACCCCAAAATGATCGAATTGT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCAATGAAAACTTGCTCTaGAGTTTCAGCTCTTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCNENLL*SFSSYA Trigger: AGCATAAGAGCTGAAACTTCAGAGCAAGTTTTCATT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCAGTATGTACTGCATTTaGTTGGCTACTAACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCSMYCI*LATNTF Trigger: GAATGTGTTAGTAGCCAAGCAAATGCAGTACATACT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCCTTATGAGTATGTACTaGATTTGCTTGGCTACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCLMSMY*ICLATN Trigger: GTTAGTAGCCAAGCAAATGCAGTACATACTCATAAG...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCGTGTCTTCAGGTTATTaGGAAAAGCTTCTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCVSSGY*EKLLVH Trigger: ATGAACAAGAAGCTTTTCGCAATAACCTGAAGACAC...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGACGTGTCTTCAGGTTATTaGGAAAAGCTTCTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSGYCEKLLVHSDFSPDVSSGY*EKLLVH Trigger: ATGAACAAGAAGCTTTTCGCAATAACCTGAAGACAC...GTCTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR CCA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTGCATTCTAGTAGCTTaGCCAAGTTATCTCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: NIKSMMVLEIFYRDKERCCILVA*PSYLVI Trigger: AATTACGAGATAACTTGGCCAAGCTACTAGAATGCA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGACGTGCATTCTAGTAGCTTaGCCAAGTTATCTCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: CLQVIAKSFLFILTFLQTCILVA*PSYLVI Trigger: AATTACGAGATAACTTGGCCAAGCTACTAGAATGCA...CGTCTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTTTTCTACTTCCTATGTaGAAATGGCAATGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRVSSGYCEKLLVHSDFSFLLPM*KWQCIL Trigger: CAGAATGCATTGCCATTTTCACATAGGAAGTAGAAA...AGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS CCA 90 bp | CGGCCTGAAGCCTGCCGCTGCCTCCGCCTCCGCCGGCCGGCCGGCTaGCAGAGAAGAGGGTGCTGCTTTCCCGGTCAGCGCCGCCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RPEACRCLRLRRPAG*QRRGCCFPGQRRRR Trigger: ACGCCGGCGGCGCTGACCGGGAAAGCAGCACCCTCTTCTCTGCCAGCCGGCCGGCCGGCGGAGGCGGAGGCAGCGGCAGGCTTCAGGCCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS GCA 90 bp | TGCCTCCGCCTCCGCCGGCCGGCCGGCTGGCAGAGAAGAGGGTGCTaGTTTCCCGGTCAGCGCCGCCGGCGTGAAGCTAGCGCGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLRLRRPAGWQRRGC*FPGQRRRREASAAA Trigger: TGCCGCCGCGCTAGCTTCACGCCGGCGGCGCTGACCGGGAAAGCAGCACCCTCTTCTCTGCCAGCCGGCCGGCCGGCGGAGGCGGAGGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS GCA 90 bp | CCAGCTCCAGGGCGGGCGAAAGGGGCCGAAGGGTCGACGGGCGCCTaGCCGAGCCAAGGCGGGAGGCTAAGCCCGCGTTGGGGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PAPGRAKGAEGSTGA*PSQGGRLSPRWGQE Trigger: CTCCTGGCCCCAACGCGGGCTTAGCCTCCCGCCTTGGCTCGGGCAGGCGCCCGTCGACCCTTCGGCCCCTTTCGCCCGCCCTGGAGCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS CCA 90 bp | TCGACGGGCGCCTGCCCGAGCCAAGGCGGGAGGCTAAGCCCGCGTTaGGGCCAGGAGAGCTGGGCTCGAAGCCGAAGCGCAGCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: STGACPSQGGRLSPR*GQESWARSRSAAAA Trigger: AGCGGCGGCTGCGCTTCGGCTTCGAGCCCAGCTCTCCTGGCCCCAACGCGGGCTTAGCCTCCCGCCTTGGCTCGGGCAGGCGCCCGTCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS TCA 90 bp | CTTCAGAGCACAGCGGGTCTGAGGCTCCCGTCGGCGGAGAATGAATaGATCACAGAGCCAAGCCCCACGCTTCCACTGGCACCCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQSTAGLRLPSAENE*ITEPSPTLPLAPCP Trigger: GGGGCAGGGTGCCAGTGGAAGCGTGGGGCTTGGCTCTGTGATTCATTCATTCTCCGCCGACGGGAGCCTCAGACCCGCTGTGCTCTGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS TCA 90 bp | CTCTCTTCAGAGCACAGCGGGTCTGAGGCTCCCGTCGGCGGAGAATaGATGAATCACAGAGCCAAGCCCCACGCTTCCACTGGCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSEHSGSEAPVGGE*MNHRAKPHASTGTL Trigger: CAGGGTGCCAGTGGAAGCGTGGGGCTTGGCTCTGTGATTCATTCATTCTCCGCCGACGGGAGCCTCAGACCCGCTGTGCTCTGAAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCGAGGCTAAGCCCGCGTaGGGGCCAGGAGAGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCEAKPA*GPGELG Trigger: GCCCAGCTCTCCTGGCCCCAACGCGGGCTTAGCCTC...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | TTCTCCAGACGTTGCTCTAAGTCAGACAGTTGTCCCTCCAGGTCTTTGTTCCGAATCCATAAACGGTGTTaGCCCGGCTATCAGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FSRRCSKSDSCPSRSLFRIHKRC*PGYQPT Trigger: AGTGGGCTGATAGCCGGGCAAACACCGTTTATGGAT...TCGGAACAAAGACCTGGAGGGACAACTGTCTGACTTAGAGCAACGTCTGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCCAGACGTTGCTCTAAGTCAGACAGTTGTCCCTCCAGGTCTTTGTTCCGAGCAATGCATTCTGAGTaGGTTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSRRCSKSDSCPSRSLFRAMHSE*VQPLAL Trigger: CAGAGCCAAGGGCTGAACCAACTCAGAATGCATTGC...TCGGAACAAAGACCTGGAGGGACAACTGTCTGACTTAGAGCAACGTCTGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS TCA 90 bp | CTGAGTTCTGTGTCACATCAGGTGTTCTTTCATCATCTGTCCCGTTaGTACTTTCCGGTGTTAAAGGAGACTGAAGATCCCCGCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSVSHQVFFHHLSR*YFPVLKETEDPRLR Trigger: CCGCAGGCGGGGATCTTCAGTCTCCTTTAACACCGGAAAGTATCAACGGGACAGATGATGAAAGAACACCTGATGTGACACAGAACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334082.11 ENST00000508576.5 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCCCACCCCCAGATCCTaGTCCGGAGGTATTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYPTPRS*SGGISR Trigger: CCTTGAAATACCTCCGGACAAGGATCTGGGGGTGGG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGACGTTGCTCTAAGTCAGACAGTTGTCCCTCCAGGTCTTTGTTCCGAATTGAGTTGGTTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRRCSKSDSCPSRSLFRIELVQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAACCAACTC...AATTCGGAACAAAGACCTGGAGGGACAACTGTCTGACTTAGAGCAACGTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS TCA 90 bp | CTTTCATCATCTGTCCCGTTGATACTTTCCGGTGTTAAAGGAGACTaGAGATCCCCGCCTGCGGATTCCTGTGAAGGTGTACTGGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSVPLILSGVKGD*RSPPADSCEGVLVS Trigger: ACTTACCAGTACACCTTCACAGGAATCCGCAGGCGGGGATCTTCAGTCTCCTTTAACACCGGAAAGTATCAACGGGACAGATGATGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334082.11 ENST00000508576.5 |
||
| CDS GCA 90 bp | ACACAGGAAAATCTCCTCGAAGTGCAAACCCGGCAGCTCGCAACCTaGACGGCACTCCACATTGGAATCTGTCTTTTTAAATGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQENLLEVQTRQLAT*TALHIGICLFKCFS Trigger: GGAGAAACATTTAAAAAGACAGATTCCAATGTGGAGTGCCGTGCAGGTTGCGAGCTGCCGGGTTTGCACTTCGAGGAGATTTTCCTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAGTTCAGTCACCCGCTaGTGCAGACGTTCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYSSVTR*CRRSAS Trigger: GGAAGCAGAACGTCTGCACAAGCGGGTGACTGAACT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATACAGTAACTGCATGCTaGCTGGTGGGTACCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYTVTAC*LVGTQF Trigger: GAACTGGGTACCCACCAGCAAGCATGCAGTTACTGT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATATCCATAAACGGTGTTaGCCCGGCTATCAGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYIHKRC*PGYQPT Trigger: AGTGGGCTGATAGCCGGGCAAACACCGTTTATGGAT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATGCAATGCATTCTGAGTaGGTTCAGCCCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYAMHSE*VQPLAL Trigger: CAGAGCCAAGGGCTGAACCAACTCAGAATGCATTGC...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATGGTTGTTCCCCCATTTaGCCCAATGAAAACTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYGCSPI*PNENLL Trigger: GAGCAAGTTTTCATTGGGCAAAATGGGGGAACAACC...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCGAGTTGGTTCAGCCCTaGGCTCTGAGTTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCELVQP*ALSSVS Trigger: TGACACAGAACTCAGAGCCAAGGGCTGAACCAACTC...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAGGGCTGCAGTGAGTTaGGCATTATTTCCTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYRAAVS*ALFPLR Trigger: CCTCAAAGGAAATAATGCCAAACTCACTGCAGCCCT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATTCAGCCTCCCAATGTTaGCTGATTGCTGAACTATGT | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYSASQC*LIAELC Trigger: ACATAGTTCAGCAATCAGCAAACATTGGGAGGCTGA...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTTCCATTGTTTCACATaGGCAGTGGACTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCFHCFT*AVDSSR Trigger: CCTGCTGGAGTCCACTGCCAATGTGAAACAATGGAA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCACGTTCTGCTTCCTCTaGATAGGCAGCAAGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCTFCFL*IGSKLL Trigger: CAGCAACTTGCTGCCTATCAAGAGGAAGCAGAACGT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCAGTGCTGAAGATAGGTaGTTCCCCCATTTTGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCSAEDR*FPHFAQ Trigger: TTGGGCAAAATGGGGGAACAACCTATCTTCAGCACT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTGTCCCTCCAGGTCTTaGTTCCGAATTTCTACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCCPSRS*FRISTS Trigger: GGAAGTAGAAATTCGGAACAAAGACCTGGAGGGACA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATCTGCATTCTAGTAGCTaGGCCAAGTTATCTCGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYLHSSS*AKLSRN Trigger: ATTACGAGATAACTTGGCCAAGCTACTAGAATGCAG...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATTCATCATCTGTCCCGTaGATACTTTCCGGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYSSSVP*ILSGVK Trigger: TTTAACACCGGAAAGTATCAACGGGACAGATGATGA...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTTGGCATTATTTCCTTaGAGGGTAGCCAGTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCLALFP*RVASSA Trigger: GGCTGAACTGGCTACCCTCAAAGGAAATAATGCCAA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATAAGTTGCTGTTTCCATaGTTTCACATTGGCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYKLLFP*FHIGSG Trigger: TCCACTGCCAATGTGAAACAATGGAAACAGCAACTT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTGTGTTTGGGTCAATTaGGAAGACATGAGCTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCCVWVN*EDMSSS Trigger: ACTCGAGCTCATGTCTTCCAAATTGACCCAAACACA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AGAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCATGTCCCTCCAGGTCTTaGTTCCGAATTTCTACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVSSGYCEKLLVHSDFSPCPSRS*FRISTS Trigger: GGAAGTAGAAATTCGGAACAAAGACCTGGAGGGACA...TGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR CAA 90 bp | CTAAGAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTAGTGCTGAAGATAGGTaGTTCCCCCATTTTGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LRVSSGYCEKLLVHSDFSSAEDR*FPHFAQ Trigger: TTGGGCAAAATGGGGGAACAACCTATCTTCAGCACT...AGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR CAA 90 bp | GACCAGCCTGTCAATGACGGGCTGCTGTATTTCAGTACTGTGTGTCAAATTTATATTGCGAAAAGCTTCTaGTTCATTCTGACTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DQPVNDGLLYFSTVCQIYIAKSF*FILTFL Trigger: GAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAAT...ATAAATTTGACACACAGTACTGAAATACAGCAGCCCGTCATTGACAGGCTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGCTGCATTCTAGTAGCTaGGCCAAGTTATCTCGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ECLQVIAKSFLFILTFLQLHSSS*AKLSRN Trigger: ATTACGAGATAACTTGGCCAAGCTACTAGAATGCAG...CTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCGCACGGCACTCCACATaGGAATCTGTCTTTTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCARHST*ESVFLN Trigger: ATTTAAAAAGACAGATTCCAATGTGGAGTGCCGTGC...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCTTGATAGGCAGCAAGTaGCTGTTTCCATTGTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCLIGSK*LFPLFH Trigger: GTGAAACAATGGAAACAGCAACTTGCTGCCTATCAA...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | CTAAGAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTTGTGTTTGGGTCAATTaGGAAGACATGAGCTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRVSSGYCEKLLVHSDFSCVWVN*EDMSSS Trigger: ACTCGAGCTCATGTCTTCCAAATTGACCCAAACACA...AGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCATGTACTGCATTTGCTaGGCTACTAACACATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCMYCIC*ATNTFK Trigger: CTTGAATGTGTTAGTAGCCAAGCAAATGCAGTACAT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCAGTGTCTTCAGGTTATaGCGAAAAGCTTCTTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCSVFRL*RKASCS Trigger: TGAACAAGAAGCTTTTCGCAATAACCTGAAGACACT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | GTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGACAGTGTCTTCAGGTTATaGCGAAAAGCTTCTTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSSGYCEKLLVHSDFSPDSVFRL*RKASCS Trigger: TGAACAAGAAGCTTTTCGCAATAACCTGAAGACACT...GTCTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCAAACAGAGGCGGCATTaGCTTATTCGAGTTAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCKQRRH*LIRVKM Trigger: CATTTTAACTCGAATAAGCAAATGCCGCCTCTGTTT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
||
| CDS-3UTR CAA 90 bp | AGAGTGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCATCATCATCTGTCCCGTaGATACTTTCCGGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RVSSGYCEKLLVHSDFSPSSSVP*ILSGVK Trigger: TTTAACACCGGAAAGTATCAACGGGACAGATGATGA...TGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCAGGTTATTGCGAAAAGCTTCTTGTTCATTCTGACTTTTCTCCAGACGATTGCGAAAAGCTTCTaGTTCATTCTGACTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLQVIAKSFLFILTFLQTIAKSF*FILTFL Trigger: GAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAAT...CGTCTGGAGAAAAGTCAGAATGAACAAGAAGCTTTTCGCAATAACCTGAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000508576.5 |
||
| CDS-3UTR CAA 90 bp | AACATCAAATCTATGATGGTGCTGGAGATCTTCTATAGAGACAAGGAGAGATGCAACAATTCGATCATTTaGGGGTACAAACAAGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: NIKSMMVLEIFYRDKERCNNSII*GYKQEV Trigger: GACTTCTTGTTTGTACCCCAAAATGATCGAATTGTT...GCATCTCTCCTTGTCTCTATAGAAGATCTCCAGCACCATCATAGATTTGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS GCA 72 bp | GGGCGGGCGAAAGGGGCCGAAGGGTCGACGGGCGCCTaGCCGAGCCAAGGCGGGAGGCTAAGCCCGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRAKGAEGSTGA*PSQGGRLSPRW Trigger: CCAACGCGGGCTTAGCCTCCCGCCTTGGCTCGGGCAGGCGCCCGTCGACCCTTCGGCCCCTTTCGCCCGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS GCA 72 bp | CGCCTCCGCCGGCCGGCCGGCTGGCAGAGAAGAGGGTaGTGCTTTCCCGGTCAGCGCCGCCGGCGTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: RLRRPAGWQRRG*CFPGQRRRREA Trigger: AGCTTCACGCCGGCGGCGCTGACCGGGAAAGCAGCACCCTCTTCTCTGCCAGCCGGCCGGCCGGCGGAGGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS GCA 72 bp | CTCCGCCGGCCGGCCGGCTGGCAGAGAAGAGGGTGCTaGTTTCCCGGTCAGCGCCGCCGGCGTGAAGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: LRRPAGWQRRGC*FPGQRRRREAS Trigger: GCTAGCTTCACGCCGGCGGCGCTGACCGGGAAAGCAGCACCCTCTTCTCTGCCAGCCGGCCGGCCGGCGGAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS CCA 72 bp | GCCTGCCCGAGCCAAGGCGGGAGGCTAAGCCCGCGTTaGGGCCAGGAGAGCTGGGCTCGAAGCCGAAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: ACPSQGGRLSPR*GQESWARSRSA Trigger: TGCGCTTCGGCTTCGAGCCCAGCTCTCCTGGCCCCAACGCGGGCTTAGCCTCCCGCCTTGGCTCGGGCAGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS TCA 72 bp | ACAGCGGGTCTGAGGCTCCCGTCGGCGGAGAATGAATaGATCACAGAGCCAAGCCCCACGCTTCCACTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TAGLRLPSAENE*ITEPSPTLPLA Trigger: TGCCAGTGGAAGCGTGGGGCTTGGCTCTGTGATTCATTCATTCTCCGCCGACGGGAGCCTCAGACCCGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS TCA 72 bp | GAGCACAGCGGGTCTGAGGCTCCCGTCGGCGGAGAATaGATGAATCACAGAGCCAAGCCCCACGCTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: EHSGSEAPVGGE*MNHRAKPHAST Trigger: AGTGGAAGCGTGGGGCTTGGCTCTGTGATTCATTCATTCTCCGCCGACGGGAGCCTCAGACCCGCTGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS TCA 72 bp | CCCCTCTTCCCTCCTCTCTTCAGAGCACAGCGGGTCTaGGGCTCCCGTCGGCGGAGAATGAATGAATCACAG | + |
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Preference number: 6 (lower is better) Translates to: PLFPPLFRAQRV*GSRRRRMNESQ Trigger: CTGTGATTCATTCATTCTCCGCCGACGGGAGCCTCAGACCCGCTGTGCTCTGAAGAGAGGAGGGAAGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS CAA 90 bp | CACCCGCTTGTGCAGACGTTCTGCTTCCTCTTGATAGGCAGCAAGTaGCTGTTTCCATTGTTTCACATTGGCAGTGGACTCCAGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: HPLVQTFCFLLIGSK*LFPLFHIGSGLQQG Trigger: GCCCTGCTGGAGTCCACTGCCAATGTGAAACAATGGAAACAGCAACTTGCTGCCTATCAAGAGGAAGCAGAACGTCTGCACAAGCGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334082.11 ENST00000535690.1 |
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| CDS TCA 72 bp | TCTGTCCCGTTGATACTTTCCGGTGTTAAAGGAGACTaGAGATCCCCGCCTGCGGATTCCTGTGAAGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SVPLILSGVKGD*RSPPADSCEGV Trigger: TACACCTTCACAGGAATCCGCAGGCGGGGATCTTCAGTCTCCTTTAACACCGGAAAGTATCAACGGGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334082.11 ENST00000508576.5 |
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| CDS CAA 72 bp | TCCAGCAGGGCTGCAGTGAGTTTGGCATTATTTCCTTaGAGGGTAGCCAGTTCAGCCTCCCAATGTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSRAAVSLALFP*RVASSASQCLL Trigger: CAGCAAACATTGGGAGGCTGAACTGGCTACCCTCAAAGGAAATAATGCCAAACTCACTGCAGCCCTGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334082.11 ENST00000535690.1 |
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| CDS GCA 72 bp | AATCTCCTCGAAGTGCAAACCCGGCAGCTCGCAACCTaGACGGCACTCCACATTGGAATCTGTCTTTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: NLLEVQTRQLAT*TALHIGICLFK Trigger: TTTAAAAAGACAGATTCCAATGTGGAGTGCCGTGCAGGTTGCGAGCTGCCGGGTTTGCACTTCGAGGAGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS GCA 72 bp | ACATTCAAGTTCAGTCACCCGCTTGTGCAGACGTTCTaGTTCCTCTTGATAGGCAGCAAGTTGCTGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TFKFSHPLVQTF*FLLIGSKLLFP Trigger: TGGAAACAGCAACTTGCTGCCTATCAAGAGGAAGCAGAACGTCTGCACAAGCGGGTGACTGAACTTGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334082.11 ENST00000535690.1 |
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| CDS CAA 72 bp | GTGCAGACGTTCTGCTTCCTCTTGATAGGCAGCAAGTaGCTGTTTCCATTGTTTCACATTGGCAGTGGACTC | + |
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Preference number: 6 (lower is better) Translates to: VQTFCFLLIGSK*LFPLFHIGSGL Trigger: GAGTCCACTGCCAATGTGAAACAATGGAAACAGCAACTTGCTGCCTATCAAGAGGAAGCAGAACGTCTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334082.11 ENST00000535690.1 |
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| CDS CAA 72 bp | TTCAGTCACCCGCTTGTGCAGACGTTCTGCTTCCTCTaGATAGGCAGCAAGTTGCTGTTTCCATTGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FSHPLVQTFCFL*IGSKLLFPLFH Trigger: GTGAAACAATGGAAACAGCAACTTGCTGCCTATCAAGAGGAAGCAGAACGTCTGCACAAGCGGGTGACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334082.11 ENST00000535690.1 |
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| CDS CAA 90 bp | ACATTCAAGTTCAGTCACCCGCTTGTGCAGACGTTCTGCTTCCTCTaGATAGGCAGCAAGTTGCTGTTTCCATTGTTTCACATTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TFKFSHPLVQTFCFL*IGSKLLFPLFHIGS Trigger: ACTGCCAATGTGAAACAATGGAAACAGCAACTTGCTGCCTATCAAGAGGAAGCAGAACGTCTGCACAAGCGGGTGACTGAACTTGAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334082.11 ENST00000535690.1 |
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| CDS CAA 72 bp | TTTCCTTTGAGGGTAGCCAGTTCAGCCTCCCAATGTTaGCTGATTGCTGAACCCATTTTGCCCAATGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: FPLRVASSASQC*LIAEPILPNEN Trigger: GTTTTCATTGGGCAAAATGGGTTCAGCAATCAGCAAACATTGGGAGGCTGAACTGGCTACCCTCAAAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535690.1 |
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| CDS CAA 90 bp | CTGAACTATGTGAAAATGGCAATGCATTCTGAGTTGGTTCAGCCCTaGGCTCTGAGTTCTGTGTCACATCAGGTGTTCTTTCATCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LNYVKMAMHSELVQP*ALSSVSHQVFFHHL Trigger: CAGATGATGAAAGAACACCTGATGTGACACAGAACTCAGAGCCAAGGGCTGAACCAACTCAGAATGCATTGCCATTTTCACATAGTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS CAA 90 bp | ACTTCCTATGTGAAAATGGCAATGCATTCTGAGTTGGTTCAGCCCTaGGCTCTGAGTTCTGTGTCACATCAGGTGTTCTTTCATCATCTG | + |
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Preference number: 6 (lower is better) Translates to: TSYVKMAMHSELVQP*ALSSVSHQVFFHHL Trigger: CAGATGATGAAAGAACACCTGATGTGACACAGAACTCAGAGCCAAGGGCTGAACCAACTCAGAATGCATTGCCATTTTCACATAGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508576.5 |
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| CDS GCA 72 bp | TCAAACAGAGGCGGCATTTGCTTATTCGAGTTAAAATaGTTTGCGGAGGAGACAGCGATCAACTCTATTCCA | + |
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Preference number: 6 (lower is better) Translates to: SNRGGICLFELK*FAEETAINSIP Trigger: TGGAATAGAGTTGATCGCTGTCTCCTCCGCAAAGCATTTTAACTCGAATAAGCAAATGCCGCCTCTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS CAA 72 bp | CGTTGCTCTAAGTCAGACAGTTGTCCCTCCAGGTCTTaGTTCCGAATTTCTACTTCCTATGTGAAAATGGCA | + |
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Preference number: 6 (lower is better) Translates to: RCSKSDSCPSRS*FRISTSYVKMA Trigger: TGCCATTTTCACATAGGAAGTAGAAATTCGGAACAAAGACCTGGAGGGACAACTGTCTGACTTAGAGCAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508576.5 |
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| CDS TCA 72 bp | AGTGCTGAAGATAGGTTGTTCCCCCATTTTGCCCAATaGAAACTTGCTCTGAAGTTTCAGCTCTTATGCTAC | + |
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Preference number: 6 (lower is better) Translates to: SAEDRLFPHFAQ*KLALKFQLLCY Trigger: GTAGCATAAGAGCTGAAACTTCAGAGCAAGTTTTCATTGGGCAAAATGGGGGAACAACCTATCTTCAGCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS CAA 72 bp | CTTGTAAATACCAAAACGTTCAAACAGAGGCGGCATTaGCTTATTCGAGTTAAAATGCTTTGCGGAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LVNTKTFKQRRH*LIRVKMLCGGD Trigger: GTCTCCTCCGCAAAGCATTTTAACTCGAATAAGCAAATGCCGCCTCTGTTTGAACGTTTTGGTATTTACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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| CDS CAA 90 bp | GATTTCTCTCTTGTAAATACCAAAACGTTCAAACAGAGGCGGCATTaGCTTATTCGAGTTAAAATGCTTTGCGGAGGAGACAGCGATCAA | + |
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Preference number: 6 (lower is better) Translates to: DFSLVNTKTFKQRRH*LIRVKMLCGGDSDQ Trigger: TTGATCGCTGTCTCCTCCGCAAAGCATTTTAACTCGAATAAGCAAATGCCGCCTCTGTTTGAACGTTTTGGTATTTACAAGAGAGAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334082.11 |
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