RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HNRNPUL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000214753

Ensembl transcript IDs: ENST00000301785.7, ENST00000540127.1

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCACTGTCCCAGTCACAAGCTCTCCCTCTGTCCCCACTCCTGCCTaGTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACC +
Preference number: 1 (lower is better)
Translates to: FTVPVTSSPSVPTPA*SYLLWRAPSRCLPT
Trigger: GGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGGAGTGGGGACAGAGGGAGAGCTTGTGACTGGGACAGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 90 bp CTTATCTCCTACCAGCCCCATTCCAGCCTTGGGGTCAGAGGTATTTaGGCGGAAGGGTGTGTCATGACAGACAAGGACACTAGAGGCCAG +
Preference number: 1 (lower is better)
Translates to: LISYQPHSSLGVRGI*AEGCVMTDKDTRGQ
Trigger: CTGGCCTCTAGTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGGCTGGAATGGGGCTGGTAGGAGATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 90 bp CCATGCCTCAGCCAAACAGCACAAAGGCACAGGAAAATGGAGAGTTaGGACACTGTAAGCCTCCCAGCCCACCAGACCACATATCCCAAA +
Preference number: 1 (lower is better)
Translates to: PCLSQTAQRHRKMES*DTVSLPAHQTTYPK
Trigger: TTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTTACAGTGTCCCAACTCTCCATTTTCCTGTGCCTTTGTGCTGTTTGGCTGAGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 90 bp CTATTCTGCTCTGCCATCAAGGACAGTCCCCAGGCTTTCTTGGCCTaGGAATCCTGTAAAATAGAACCACCCACTGGCAGTCTCCATGCC +
Preference number: 1 (lower is better)
Translates to: LFCSAIKDSPQAFLA*ESCKIEPPTGSLHA
Trigger: GGCATGGAGACTGCCAGTGGGTGGTTCTATTTTACAGGATTCCCAGGCCAAGAAAGCCTGGGGACTGTCCTTGATGGCAGAGCAGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR TCA 90 bp ATTCCAGCCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATaGCAGACAAGGACACTAGAGGCCAGAATAAGGGTCTGTACACCT +
Preference number: 1 (lower is better)
Translates to: IPALGSEVFGRKGVS*QTRTLEARIRVCTP
Trigger: AGGTGTACAGACCCTTATTCTGGCCTCTAGTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGGCTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR GCA 90 bp CCCACACCACCTCATCACTCTCCTTTACTTGGCTGCCAGTCCAGCTaGCTCAGAATGTCAGAAGGGTGCCATTTTCAGTTCTTTTCCTGT +
Preference number: 1 (lower is better)
Translates to: PTPPHHSPLLGCQSS*LRMSEGCHFQFFSC
Trigger: ACAGGAAAAGAACTGAAAATGGCACCCTTCTGACATTCTGAGGCAGCTGGACTGGCAGCCAAGTAAAGGAGAGTGATGAGGTGGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR GCA 90 bp GCCTGTGAGCCCACACCACAGGATTCACCTATATACATATCCCGCTaGAGTGAAAAGAATCCTGCTGTGTTTTCGTGTGAGCTGAAACCC +
Preference number: 1 (lower is better)
Translates to: ACEPTPQDSPIYISR*SEKNPAVFSCELKP
Trigger: GGGTTTCAGCTCACACGAAAACACAGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGTGGGCTCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR TCA 90 bp TATCCCGCTGCAGTGAAAAGAATCCTGCTGTGTTTTCGTGTGAGCTaGAACCCTGAGAAACGTTCCTTCTCTCGCACTGTAAGAGGACAG +
Preference number: 1 (lower is better)
Translates to: YPAAVKRILLCFRVS*NPEKRSFSRTVRGQ
Trigger: CTGTCCTCTTACAGTGCGAGAGAAGGAACGTTTCTCAGGGTTTCAGCTCACACGAAAACACAGCAGGATTCTTTTCACTGCAGCGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR TCA 90 bp GCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTCTGCTaGGTAAGCTCTTGGCTGACAGTGCTGAGCAGGAGGATGAATGAA +
Preference number: 1 (lower is better)
Translates to: AQIFSLGTAAVCGVC*VSSWLTVLSRRMNE
Trigger: TTCATTCATCCTCCTGCTCAGCACTGTCAGCCAAGAGCTTACTCAGCAGACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR GCA 90 bp TTTACAGGAATTAATCAATGGGTCTATAGAAGGGGCAGGCTATTCTaGTCTGCCATCAAGGACAGTCCCCAGGCTTTCTTGGCCTGGGAA +
Preference number: 1 (lower is better)
Translates to: FTGINQWVYRRGRLF*SAIKDSPQAFLAWE
Trigger: TTCCCAGGCCAAGAAAGCCTGGGGACTGTCCTTGATGGCAGAGCAGAATAGCCTGCCCCTTCTATAGACCCATTGATTAATTCCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 90 bp TTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTaGTGTCTGCTGAGTAAGCTCTTGGCTGACAGTGCTGAGCAGGAG +
Preference number: 1 (lower is better)
Translates to: FSSGTDFLTRNCCSM*CLLSKLLADSAEQE
Trigger: CTCCTGCTCAGCACTGTCAGCCAAGAGCTTACTCAGCAGACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR TCA 90 bp TGCAGTGAAAAGAATCCTGCTGTGTTTTCGTGTGAGCTGAAACCCTaGGAAACGTTCCTTCTCTCGCACTGTAAGAGGACAGACACTCTA +
Preference number: 1 (lower is better)
Translates to: CSEKNPAVFSCELKP*ETFLLSHCKRTDTL
Trigger: TAGAGTGTCTGTCCTCTTACAGTGCGAGAGAAGGAACGTTTCTCAGGGTTTCAGCTCACACGAAAACACAGCAGGATTCTTTTCACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR GCA 90 bp AGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTaGAGTATGTGGTGTCTGCTGAGTAAGCTCTTGGCTGACAGTGCT +
Preference number: 1 (lower is better)
Translates to: SEAFSSGTDFLTRNC*SMWCLLSKLLADSA
Trigger: AGCACTGTCAGCCAAGAGCTTACTCAGCAGACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR GCA 90 bp GGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTaGTGCAGTATGTGGTGTCTGCTGAGTAAGCTCTTGGCTGACAGT +
Preference number: 1 (lower is better)
Translates to: GSEAFSSGTDFLTRN*CSMWCLLSKLLADS
Trigger: ACTGTCAGCCAAGAGCTTACTCAGCAGACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 90 bp ACAGAAACAAAACCCGGACATCTACTGTTGTTGCAAATGATCTCTTaGACTAAACCAACAAGGATGTGGCAGTTTCACTTTCCACCCACC +
Preference number: 1 (lower is better)
Translates to: TETKPGHLLLLQMIS*TKPTRMWQFHFPPT
Trigger: GGTGGGTGGAAAGTGAAACTGCCACATCCTTGTTGGTTTAGTCCAAGAGATCATTTGCAACAACAGTAGATGTCCGGGTTTTGTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 90 bp ACCCATATTCTTGAACCCAGCAACCTACAGCTGTCTATCAAGAACTaGGAGGGTATTGGTAAAGTCACAAATGAAACTATCCCAACTGAA +
Preference number: 1 (lower is better)
Translates to: THILEPSNLQLSIKN*EGIGKVTNETIPTE
Trigger: TTCAGTTGGGATAGTTTCATTTGTGACTTTACCAATACCCTCCCAGTTCTTGATAGACAGCTGTAGGTTGCTGGGTTCAAGAATATGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 90 bp CAAGAATGCTTTACAGGTTGTGCAAAAACATTTACAGGCTCCATGTaGTGTTTTTCTCACAAGCTTTCCTGTCTACAACTACAACAGACG +
Preference number: 1 (lower is better)
Translates to: QECFTGCAKTFTGSM*CFSHKLSCLQLQQT
Trigger: CGTCTGTTGTAGTTGTAGACAGGAAAGCTTGTGAGAAAAACACCACATGGAGCCTGTAAATGTTTTTGCACAACCTGTAAAGCATTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR TCA 90 bp AGGGAAAGGTCGGTAAAGAAAATACAAACGGTTAGTTGGTGCAAGTaGTTGATAAGAGCCAATCGTTTATTTTCACTGTCCCAGTCACAA +
Preference number: 1 (lower is better)
Translates to: RERSVKKIQTVSWCK*LIRANRLFSLSQSQ
Trigger: TTGTGACTGGGACAGTGAAAATAAACGATTGGCTCTTATCAATCACTTGCACCAACTAACCGTTTGTATTTTCTTTACCGACCTTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCTCTCCTTTACTTGGCTaGCAGTCCAGCTGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLSPLLG*QSSCLR
Trigger: TCTGAGGCAGCTGGACTGGCAGCCAAGTAAAGGAGA...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGAGAGCACCCTCGCGCTaGCTCCCCACCCTCCCCACA +
Preference number: 2 (lower is better)
Translates to: VTNETIPTEGSWLEASLGRAPSR*LPTLPT
Trigger: TGTGGGGAGGGTGGGGAGGCAGCGCGAGGGTGCTCT...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACCTGCCTGCTCCTACCTaGTGTGGAGAGCACCCTCGC +
Preference number: 2 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHLPAPT*CGEHPR
Trigger: GCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAG...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR TCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACAAGGGTCTGTACACCTaGACAAGGGCTGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHKGLYT*TRAAGQ
Trigger: CTGCCCTGCAGCCCTTGTTCAGGTGTACAGACCCTT...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACCAGGCTATTCTGCTCTaGCATCAAGGACAGTCCCCA +
Preference number: 2 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHQAILL*HQGQSP
Trigger: TGGGGACTGTCCTTGATGGCAGAGCAGAATAGCCTG...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR TCA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGAATTCAGCTTCATGGCTaGCAGGTGACCATGGCAGGG +
Preference number: 2 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGIQLHG*QVTMAG
Trigger: CCCTGCCATGGTCACCTGTCAGCCATGAAGCTGAAT...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR TCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACTGCTGTGTTTTCGTGTaGGCTGAAACCCTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHCCVFV*AETLRN
Trigger: GTTTCTCAGGGTTTCAGCTCACACGAAAACACAGCA...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAGTCCCCACTCCTGCCTaGTCCTACCTGCTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKVPTPA*SYLLWR
Trigger: TCTCCACAGCAGGTAGGAGCAGGCAGGAGTGGGGAC...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CCA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACATCACTCTCCTTTACTTaGCTGCCAGTCCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: TNETIPTEGSWLEASLGTSLSFT*LPVQLP
Trigger: AGGCAGCTGGACTGGCAGCCAAGTAAAGGAGAGTGA...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAGGCTGCCAGTCCAGCTaGCTCAGAATGTCAGAAGGG +
Preference number: 2 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKGCQSS*LRMSEG
Trigger: CCCTTCTGACATTCTGAGGCAGCTGGACTGGCAGCC...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR TCA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGATGTGAGCTGAAACCCTaGGAAACGTTCCTTCTCTCG +
Preference number: 2 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGCELKP*ETFLLS
Trigger: CGAGAGAAGGAACGTTTCTCAGGGTTTCAGCTCACA...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAATGCTCCTACCTGCTGTaGAGAGCACCCTCGCGCTGC +
Preference number: 2 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQCSYLL*RAPSRC
Trigger: GCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCA...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTGCTATTCTCAGCACCTaGGCCTGTGAGCCCACACCA +
Preference number: 2 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCAILST*ACEPTP
Trigger: TGGTGTGGGCTCACAGGCCCAGGTGCTGAGAATAGC...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACCTGTCTATCAAGAACTaGGAGGGTATTGGTAAAGTC +
Preference number: 2 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHLSIKN*EGIGKV
Trigger: GACTTTACCAATACCCTCCCAGTTCTTGATAGACAG...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACATATACATATCCCGCTaGAGTGAAAAGAATCCTGCT +
Preference number: 2 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHIYISR*SEKNPA
Trigger: AGCAGGATTCTTTTCACTGCAGCGGGATATGTATAT...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACACAGAGACTAGAGACTaGCAAATCACAATCTTTAGG +
Preference number: 2 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHTETRD*QITIFR
Trigger: CCTAAAGATTGTGATTTGCCAGTCTCTAGTCTCTGT...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAACATCTGAAAAGGGGTaGCAGCCACTGCCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKTSEKG*QPLPQE
Trigger: TTCCTGAGGCAGTGGCTGCCACCCCTTTTCAGATGT...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CAA 90 bp ACAGAAAAATTCATGCAATCACTCCACTGCCACACAGAAATCCATTaGAGGACACCGCAGGGAAGCAGGTGCCAAGAGAAAGGACATGAC +
Preference number: 2 (lower is better)
Translates to: TEKFMQSLHCHTEIH*RTPQGSRCQEKGHD
Trigger: GTCATGTCCTTTCTCTTGGCACCTGCTTCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAATTTTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAAGAGATTCAGCTTCATaGCTGACAGGTGACCATGGC +
Preference number: 2 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKRDSAS*LTGDHG
Trigger: GCCATGGTCACCTGTCAGCCATGAAGCTGAATCTCT...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CAA 90 bp TTGAACCCAGCAACCTACAGCTGTCTATCAAGAACTGGGAGGGTATaGGTAAAGTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: LNPATYSCLSRTGRV*VKSQMKLSQLKAPG
Trigger: GCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGACTTTACCAATACCCTCCCAGTTCTTGATAGACAGCTGTAGGTTGCTGGGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR TCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAATGTTTTCGTGTGAGCTaGAACCCTGAGAAACGTTCC +
Preference number: 2 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKCFRVS*NPEKRS
Trigger: GGAACGTTTCTCAGGGTTTCAGCTCACACGAAAACA...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR TCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAACATATCCCGCTGCAGTaGAAAGAATCCTGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKHIPLQ*KESCCV
Trigger: AACACAGCAGGATTCTTTTCACTGCAGCGGGATATG...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTACAGGCAGCCCTAAGTaGTGCTTTCTGCGCAAATGT +
Preference number: 2 (lower is better)
Translates to: TPQDSPIYISRCSEKNPATGSPK*CFLRKC
Trigger: ACATTTGCGCAGAAAGCAGCACTTAGGGCTGCCTGT...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAAGAAGTCGGGAAGGGGTaGTCCCTTTCACACGCACAT +
Preference number: 2 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQEVGKG*SLSHAH
Trigger: ATGTGCGTGTGAAAGGGAGCACCCCTTCCCGACTTC...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCAATAGAACCACCCACTaGCAGTCTCCATGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCNRTTH*QSPCLS
Trigger: GCTGAGGCATGGAGACTGCCAGTGGGTGGTTCTATT...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTGTCCCCAGGCTTTCTTaGCCTGGGAATCCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCVPRLS*PGNPVK
Trigger: TTTTACAGGATTCCCAGGCCAAGAAAGCCTGGGGAC...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTGGCAGCCCTAAGTGCTaGTTTCTGCGCAAATGTTTT +
Preference number: 2 (lower is better)
Translates to: TPQDSPIYISRCSEKNPAGSPKC*FLRKCF
Trigger: AAAACATTTGCGCAGAAAGCAGCACTTAGGGCTGCC...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAACACTGGCAGTCTCCATaGCTCAGCCAAACAGCACAA +
Preference number: 2 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQHWQSP*LSQTAQ
Trigger: TTGTGCTGTTTGGCTGAGGCATGGAGACTGCCAGTG...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR TCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTCACAATCTTTAGGCTaGGGGCTGCAATCCCATTCT +
Preference number: 2 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCSQSLG*GLQSHS
Trigger: AGAATGGGATTGCAGCCCTCAGCCTAAAGATTGTGA...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR TCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCGTTAGTTGGTGCAAGTaGTTGATAAGAGCCAATCGT +
Preference number: 2 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCVSWCK*LIRANR
Trigger: ACGATTGGCTCTTATCAATCACTTGCACCAACTAAC...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR TCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCACTGAAGCTAGACATTaGAAGAGCATTCCATATCCC +
Preference number: 2 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCTEARH*KSIPYP
Trigger: GGGATATGGAATGCTCTTTCAATGTCTAGCTTCAGT...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAATTACAGAAAAATTCATaGAATCACTCCACTGCCACA +
Preference number: 2 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKLQKNS*NHSTAT
Trigger: TGTGGCAGTGGAGTGATTGCATGAATTTTTCTGTAA...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR GCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAAATGCAATCACTCCACTaGCACACAGAAATCCATTTG +
Preference number: 2 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQMQSLH*HTEIHL
Trigger: CAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCAT...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CAA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCTTCCTTGGTTGTGTTTaGCGGGGGTGCCTGGCACCC +
Preference number: 3 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLFLGCV*RGCLAP
Trigger: GGGTGCCAGGCACCCCCGCAAAACACAACCAAGGAA...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 72 bp AGCCAAACAGCACAAAGGCACAGGAAAATGGAGAGTTaGGACACTGTAAGCCTCCCAGCCCACCAGACCACA +
Preference number: 3 (lower is better)
Translates to: SQTAQRHRKMES*DTVSLPAHQTT
Trigger: TGTGGTCTGGTGGGCTGGGAGGCTTACAGTGTCCCAACTCTCCATTTTCCTGTGCCTTTGTGCTGTTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR TCA 72 bp TTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATaGCAGACAAGGACACTAGAGGCCAGAATAAGGGTC +
Preference number: 3 (lower is better)
Translates to: LGSEVFGRKGVS*QTRTLEARIRV
Trigger: GACCCTTATTCTGGCCTCTAGTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 72 bp TCTGCCATCAAGGACAGTCCCCAGGCTTTCTTGGCCTaGGAATCCTGTAAAATAGAACCACCCACTGGCAGT +
Preference number: 3 (lower is better)
Translates to: SAIKDSPQAFLA*ESCKIEPPTGS
Trigger: ACTGCCAGTGGGTGGTTCTATTTTACAGGATTCCCAGGCCAAGAAAGCCTGGGGACTGTCCTTGATGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CAA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGACTGCTGAGTAAGCTCTaGGCTGACAGTGCTGAGCAG +
Preference number: 3 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGLLSKL*ADSAEQ
Trigger: CTGCTCAGCACTGTCAGCCAAGAGCTTACTCAGCAG...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CAA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGACAGGAAAATGGAGAGTaGGGACACTGTAAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGQENGE*GHCKPP
Trigger: GGGAGGCTTACAGTGTCCCAACTCTCCATTTTCCTG...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CAA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAATGGGGTCAGAGGTATTaGGGCGGAAGGGTGTGTCAT +
Preference number: 3 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKWGQRY*GGRVCH
Trigger: ATGACACACCCTTCCGCCCAAATACCTCTGACCCCA...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR GCA 72 bp ATTAATCAATGGGTCTATAGAAGGGGCAGGCTATTCTaGTCTGCCATCAAGGACAGTCCCCAGGCTTTCTTG +
Preference number: 3 (lower is better)
Translates to: INQWVYRRGRLF*SAIKDSPQAFL
Trigger: CAAGAAAGCCTGGGGACTGTCCTTGATGGCAGAGCAGAATAGCCTGCCCCTTCTATAGACCCATTGATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CAA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAAATCACTCTCCTTTACTaGGCTGCCAGTCCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQITLLY*AASPAA
Trigger: GGCAGCTGGACTGGCAGCCAAGTAAAGGAGAGTGAT...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR TCA 72 bp AAGAATCCTGCTGTGTTTTCGTGTGAGCTGAAACCCTaGGAAACGTTCCTTCTCTCGCACTGTAAGAGGACA +
Preference number: 3 (lower is better)
Translates to: KNPAVFSCELKP*ETFLLSHCKRT
Trigger: TGTCCTCTTACAGTGCGAGAGAAGGAACGTTTCTCAGGGTTTCAGCTCACACGAAAACACAGCAGGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR TCA 72 bp GCAGTGAAAAGAATCCTGCTGTGTTTTCGTGTGAGCTaGAACCCTGAGAAACGTTCCTTCTCTCGCACTGTA +
Preference number: 3 (lower is better)
Translates to: AVKRILLCFRVS*NPEKRSFSRTV
Trigger: TACAGTGCGAGAGAAGGAACGTTTCTCAGGGTTTCAGCTCACACGAAAACACAGCAGGATTCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR GCA 72 bp CCCACACCACAGGATTCACCTATATACATATCCCGCTaGAGTGAAAAGAATCCTGCTGTGTTTTCGTGTGAG +
Preference number: 3 (lower is better)
Translates to: PTPQDSPIYISR*SEKNPAVFSCE
Trigger: CTCACACGAAAACACAGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR GCA 72 bp TTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTaGAGTATGTGGTGTCTGCTGAGTAAGCTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: FSSGTDFLTRNC*SMWCLLSKLLA
Trigger: AGCCAAGAGCTTACTCAGCAGACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR GCA 72 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTaGTGCAGTATGTGGTGTCTGCTGAGTAAGCTCTTG +
Preference number: 3 (lower is better)
Translates to: AFSSGTDFLTRN*CSMWCLLSKLL
Trigger: CAAGAGCTTACTCAGCAGACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR-3UTR CAA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCGCCCCAAAAGGAATTTaGTTTCTAGAAGTCGGGAAG +
Preference number: 3 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCAPKGI*FLEVGK
Trigger: CTTCCCGACTTCTAGAAACAAAATTCCTTTTGGGGC...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 72 bp CTTGAACCCAGCAACCTACAGCTGTCTATCAAGAACTaGGAGGGTATTGGTAAAGTCACAAATGAAACTATC +
Preference number: 3 (lower is better)
Translates to: LEPSNLQLSIKN*EGIGKVTNETI
Trigger: GATAGTTTCATTTGTGACTTTACCAATACCCTCCCAGTTCTTGATAGACAGCTGTAGGTTGCTGGGTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 72 bp AAACCCGGACATCTACTGTTGTTGCAAATGATCTCTTaGACTAAACCAACAAGGATGTGGCAGTTTCACTTT +
Preference number: 3 (lower is better)
Translates to: KPGHLLLLQMIS*TKPTRMWQFHF
Trigger: AAAGTGAAACTGCCACATCCTTGTTGGTTTAGTCCAAGAGATCATTTGCAACAACAGTAGATGTCCGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CCA 72 bp TTTACAGGTTGTGCAAAAACATTTACAGGCTCCATGTaGTGTTTTTCTCACAAGCTTTCCTGTCTACAACTA +
Preference number: 3 (lower is better)
Translates to: FTGCAKTFTGSM*CFSHKLSCLQL
Trigger: TAGTTGTAGACAGGAAAGCTTGTGAGAAAAACACCACATGGAGCCTGTAAATGTTTTTGCACAACCTGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR TCA 72 bp TCGGTAAAGAAAATACAAACGGTTAGTTGGTGCAAGTaGTTGATAAGAGCCAATCGTTTATTTTCACTGTCC +
Preference number: 3 (lower is better)
Translates to: SVKKIQTVSWCK*LIRANRLFSLS
Trigger: GGACAGTGAAAATAAACGATTGGCTCTTATCAATCACTTGCACCAACTAACCGTTTGTATTTTCTTTACCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCCCGCTGCGCAGTGTTTaGTTCTCCTTCGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLPLRSV*FSFVSP
Trigger: AGGGGAGACGAAGGAGAAGCAAACACTGCGCAGCGG...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCCGGAAGGGTGTGTCATaGCAGACAAGGACACTAGAG +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLRKGVS*QTRTLE
Trigger: CTCTAGTGTCCTTGTCTGTCATGACACACCCTTCCG...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCTTTGGGGTCCATCTCTaGCTCCTCGAGACCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLFGVHL*LLETLH
Trigger: ATGAAGGGTCTCGAGGAGCCAGAGATGGACCCCAAA...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAACTCACGCGCCAGCACTaGGCCCGCGCGAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKELTRQH*ARASER
Trigger: GCGCTCGCTCGCGCGGGCTCAGTGCTGGCGCGTGAG...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCGTCCATTTTCTGCCTTaGGTCCTCGTCCATCGAAAC +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLVHFLP*VLVHRN
Trigger: GTTTCGATGGACGAGGACTCAAGGCAGAAAATGGAC...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCCCCTTCATCCTCATTTaGTTGAGCACAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLPFILI*LSTVSA
Trigger: AGCTGAGACTGTGCTCAATCAAATGAGGATGAAGGG...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCTGTTTTCGTGTGAGCTaGAACCCTGAGAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLCFRVS*NPEKRS
Trigger: GGAACGTTTCTCAGGGTTTCAGCTCACACGAAAACA...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGATCCAGGCCCCGCCGCTaGAGCTCCGACCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGSRPRR*SSDRSS
Trigger: CGAGCTGCGGTCGGAGCTGCAGCGGCGGGGCCTGGA...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACGGCTTGAGCAGGGGGTaGCTCCTCGTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHGLSRG*LLVLVL
Trigger: GAGGACGAGGACGAGGAGCCACCCCCTGCTCAAGCC...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCAGGTTCACAAGAGTTTaGTCCTCCTCCTCATCTTTT +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLRFTRV*SSSSSF
Trigger: AAAAGATGAGGAGGAGGATCAAACTCTTGTGAACCT...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGAGCGTCCAGCGCCTCCTaGAGCCGCTGCGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGASSAS*SRCARS
Trigger: GGATCTGGCGCAGCGGCTGCAGGAGGCGCTGGACGC...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCATTCTGGGTTACCTTTaGCTCAAAGCAGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLILGYL*LKADFS
Trigger: GGAAAAGTCTGCTTTGAGGCAAAGGTAACCCAGAAT...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCGGCCACTTCCAAGAATaGTTTACAGGTTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLGHFQE*FTGCAK
Trigger: TTTTGCACAACCTGTAAAGCATTCTTGGAAGTGGCC...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCACATTTTCGCCAGAATaGTGTAATGAGAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLTFSPE*CNENRG
Trigger: TCCCCTGTTCTCATTACACCATTCTGGCGAAAATGT...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACCCCCGGCTTCGGTTCTaGCGGTTACGCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHPRLRF*RLRLFR
Trigger: CCGAAACAAGCGTAACCGGCAGAACCGAAGCCGGGG...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAACCATTTACCCCGCCTaGCCCGGCCGTGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKTIYPA*PGRGLR
Trigger: GCGGAGGCCACGGCCGGGTCAGGCGGGGTAAATGGT...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACGGTGGGGAACTTCTCTaGGAAAAGTGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHGGELL*EKWLPS
Trigger: GGAGGGCAGCCACTTTTCTCAGAGAAGTTCCCCACC...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAACGCGCACGGTCCCGCTaGGCAGTGTTTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKERARSR*AVFASP
Trigger: AGGAGAAGCAAACACTGCGCAGCGGGACCGTGCGCG...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACACCTCTGTTTCCAGGCTaGCCCCAGTACTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: TNETIPTEGSWLEASLGTPLFPG*PQYCCP
Trigger: CGGGCAGCAGTACTGGGGGCAGCCTGGAAACAGAGG...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CAA 72 bp CTACCAGCCCCATTCCAGCCTTGGGGTCAGAGGTATTaGGGCGGAAGGGTGTGTCATGACAGACAAGGACAC +
Preference number: 4 (lower is better)
Translates to: LPAPFQPWGQRY*GGRVCHDRQGH
Trigger: GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGGCTGGAATGGGGCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGGGCTGCCAGTCCAGCTaGCTCAGAATGTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGGCQSS*LRMSEG
Trigger: CCCTTCTGACATTCTGAGGCAGCTGGACTGGCAGCC...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAAGAGCACCCTCGCGCTaGCTCCCCACCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKRAPSR*LPTLPT
Trigger: TGTGGGGAGGGTGGGGAGGCAGCGCGAGGGTGCTCT...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACACCAACTGAAGGCTCCTaGCTAGAGGCCTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TNETIPTEGSWLEASLGTPTEGS*LEASLG
Trigger: CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGG...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACAAAGGGTCTGTACACCTaGACAAGGGCTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TNETIPTEGSWLEASLGTKGLYT*TRAAGQ
Trigger: CTGCCCTGCAGCCCTTGTTCAGGTGTACAGACCCTT...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACGCAGGACTAAACATCTaGAAAGGGGTGGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHAGLNI*KGVAAT
Trigger: AGTGGCTGCCACCCCTTTTCAGATGTTTAGTCCTGC...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCCGCCGCCTCCTCCCCTaGGAACCGTCGACCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCRRLLP*EPSTES
Trigger: GGACTCGGTCGACGGTTCGCAGGGGAGGAGGCGGCG...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAAGGGGTCAGAGGTATTTaGGCGGAAGGGTGTGTCATG +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEGVRGI*AEGCVM
Trigger: CATGACACACCCTTCCGCCCAAATACCTCTGACCCC...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGAGCCCCATTCCAGCCTTaGGGTCAGAGGTATTTGGGC +
Preference number: 4 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGAPFQP*GQRYLG
Trigger: GCCCAAATACCTCTGACCCCAAGGCTGGAATGGGGC...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACATCTGAAAAGGGGTaGCAGCCACTGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGTSEKG*QPLPQE
Trigger: TTCCTGAGGCAGTGGCTGCCACCCCTTTTCAGATGT...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGTGTGAGCTGAAACCCTaGGAAACGTTCCTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGCELKP*ETFLLS
Trigger: CGAGAGAAGGAACGTTTCTCAGGGTTTCAGCTCACA...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCGCCTCCTGCAGCCGCTaGGCCAGATCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCASCSR*ARSTLR
Trigger: CCTCAAGGTGGATCTGGCGCAGCGGCTGCAGGAGGC...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACAGGCAGCCCTAAGTaGTGCTTTCTGCGCAAATGT +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGTGSPK*CFLRKC
Trigger: ACATTTGCGCAGAAAGCAGCACTTAGGGCTGCCTGT...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACATCTCCTTTACTTGGCTaGCAGTCCAGCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: TNETIPTEGSWLEASLGTSPLLG*QSSCLR
Trigger: TCTGAGGCAGCTGGACTGGCAGCCAAGTAAAGGAGA...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTCTGCCTGCTCCTACCTaGTGTGGAGAGCACCCTCGC +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPALPAPT*CGEHPR
Trigger: GCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAG...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAACAGGCTATTCTGCTCTaGCATCAAGGACAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEQAILL*HQGQSP
Trigger: TGGGGACTGTCCTTGATGGCAGAGCAGAATAGCCTG...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACAGGGGTGGCAGCCACTaGCTCAGGAAATTCAATTTT +
Preference number: 4 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHRGGSH*LRKFNF
Trigger: AAAATTGAATTTCCTGAGGCAGTGGCTGCCACCCCT...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTCTTCTCGGAAGCATCTaGCTCGGCCGCGGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCLLGSI*LGRGLH
Trigger: ATGGAGGCCGCGGCCGAGCCAGATGCTTCCGAGAAG...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACACACAAACTCTTCTGGTaGTGGGAAGAAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TNETIPTEGSWLEASLGTHKLFW*WEEGLL
Trigger: GAGGAGCCCTTCTTCCCACCACCAGAAGAGTTTGTG...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGGAACACAAACTCTTCTaGTGGTGGGAAGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGEHKLF*WWEEGL
Trigger: GAGCCCTTCTTCCCACCACCAGAAGAGTTTGTGTTC...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAATTCATGGCTGACAGGTaGCCATGGCAGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKFMADR*PWQGLH
Trigger: GTGAAGCCCCTGCCATGGTCACCTGTCAGCCATGAA...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGTCACAATCTTTAGGCTaGGGGCTGCAATCCCATTCT +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGSQSLG*GLQSHS
Trigger: AGAATGGGATTGCAGCCCTCAGCCTAAAGATTGTGA...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAACTCTTGCCGAGGCCCTaGTCTTCGCCACCATTTACC +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKLLPRP*SSPPFT
Trigger: GGTAAATGGTGGCGAAGAGCAGGGCCTCGGCAAGAG...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCCGTCTTCCTCCCTCTTaGCGAGGCCCTGCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCRLPPS*RGPALR
Trigger: GCGAAGAGCAGGGCCTCGGCAAGAGGGAGGAAGACG...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACAGGAGAGAGACCTCTGTaGAGCCTTCTTTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: TNETIPTEGSWLEASLGTGERPL*SLLSLG
Trigger: TCCCAATGAAAGAAGGCTGCACAGAGGTCTCTCTCC...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTGGTCTTGGGAGGGACTaGAGTGCGTACACGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCGLGRD*SAYTLL
Trigger: GAGGAGCGTGTACGCACTGCAGTCCCTCCCAAGACC...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTGTCCCCACTCCTGCCTaGTCCTACCTGCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCVPTPA*SYLLWR
Trigger: TCTCCACAGCAGGTAGGAGCAGGCAGGAGTGGGGAC...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAAGTCCCCAGGCTTTCTTaGCCTGGGAATCCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEVPRLS*PGNPVK
Trigger: TTTTACAGGATTCCCAGGCCAAGAAAGCCTGGGGAC...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGAACTGCTGCAGTATGTaGTGTCTGCTGAGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGNCCSM*CLLSKL
Trigger: GAGCTTACTCAGCAGACACCACATACTGCAGCAGTT...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACACGGTCTTTGCTCACTTaGAAATGCAGATCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: TNETIPTEGSWLEASLGTRSLLT*KCRSEV
Trigger: TACCTCGGATCTGCATTTTCAAGTGAGCAAAGACCG...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACATCATCCTCATTTGATTaGGCACAGTCTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: TNETIPTEGSWLEASLGTSSSFD*AQSQLP
Trigger: TGGGAGCTGAGACTGTGCTCAATCAAATGAGGATGA...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTTGGGAGGGACTGCAGTaGGTACACGCTCCTCAACAG +
Preference number: 4 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCWEGLQ*VHAPQQ
Trigger: CTGTTGAGGAGCGTGTACGCACTGCAGTCCCTCCCA...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAGAAGTCGGGAAGGGGTaGTCCCTTTCACACGCACAT +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKEVGKG*SLSHAH
Trigger: ATGTGCGTGTGAAAGGGAGCACCCCTTCCCGACTTC...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGTTTCTCACTAGGAACTaGTGCAGTATGTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGFLTRN*CSMWCL
Trigger: CAGACACCACATACTGCAGCAGTTCCTAGTGAGAAA...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGACCCCAGACCAAAGGGTaGGGAACTTCTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGPQTKG*GTSLRK
Trigger: TTTTCTCAGAGAAGTTCCCCACCCTTTGGTCTGGGG...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACATCTTCACCAAGCTGTaGACGGGAAAAATCAACAGA +
Preference number: 4 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHIFTKL*TGKINR
Trigger: TCTGTTGATTTTTCCCGTCCACAGCTTGGTGAAGAT...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGAAGAGATTCAGCTTCATaGCTGACAGGTGACCATGGC +
Preference number: 4 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGRDSAS*LTGDHG
Trigger: GCCATGGTCACCTGTCAGCCATGAAGCTGAATCTCT...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CAA 72 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTaGAGGACACCGCAGGGAAGCAGGTGCCAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: FMQSLHCHTEIH*RTPQGSRCQEK
Trigger: TTTCTCTTGGCACCTGCTTCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAATCCGAGAGAAGGTCTTaGACAGCAATAGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKSERRS*TAIASA
Trigger: GGCGGAAGCTATTGCTGTTCAAGACCTTCTCTCGGA...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTATTCAGCTTCATGGCTaGCAGGTGACCATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCIQLHG*QVTMAG
Trigger: CCCTGCCATGGTCACCTGTCAGCCATGAAGCTGAAT...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGACATATCCCGCTGCAGTaGAAAGAATCCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGHIPLQ*KESCCV
Trigger: AACACAGCAGGATTCTTTTCACTGCAGCGGGATATG...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGCTCCATAGCGGTCTTTaGTCACTTGAAAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGLHSGL*SLENAD
Trigger: ATCTGCATTTTCAAGTGAGCAAAGACCGCTATGGAG...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTTCCGTAAGTACTCCTTaGCCCAGACCAAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCSVSTP*PRPKGG
Trigger: CCCACCCTTTGGTCTGGGGCAAGGAGTACTTACGGA...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTCACCTGAACAAGGGCTaGAGGGCAGTAACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPAHLNKG*RAVTVG
Trigger: TCCCACTGTTACTGCCCTGCAGCCCTTGTTCAGGTG...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGCTGTCTATCAAGAACTaGGAGGGTATTGGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGLSIKN*EGIGKV
Trigger: GACTTTACCAATACCCTCCCAGTTCTTGATAGACAG...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGCTAAGGGAATTTCTTTaGGCTCCAGTTTTTACCTCC +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGLREFL*APVFTS
Trigger: GGAGGTAAAAACTGGAGCCCAAAGAAATTCCCTTAG...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTCCAGGGAATCCTTGCTaGTCCAGAATGCCACACCTA +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPAPGNPC*SRMPHL
Trigger: TAGGTGTGGCATTCTGGATCAGCAAGGATTCCCTGG...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTCACTGGGAGGCTTGCTaGACTAAAAGGTCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPAHWEAC*TKRSRL
Trigger: AAGCCGAGACCTTTTAGTTCAGCAAGCCTCCCAGTG...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTTTAGTGACAATGGGCTaGGCTTCCTCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCLVTMG*ASSFSS
Trigger: GCTGGAGAAGGAGGAAGCTCAGCCCATTGTCACTAA...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAAGTTAGTTGGTGCAAGTaGTTGATAAGAGCCAATCGT +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEVSWCK*LIRANR
Trigger: ACGATTGGCTCTTATCAATCACTTGCACCAACTAAC...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAAGAGAACTGCCCAGGTaGGGAAATGGAAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKRELPR*GNGSEA
Trigger: TGCTTCACTTCCATTTCCTCACCTGGGCAGTTCTCT...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAAAAATTGTCCATTTTCTaGCTTGAGTCCTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEKLSIF*LESSSI
Trigger: GATGGACGAGGACTCAAGGCAGAAAATGGACAATTT...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAATTTTGCATATTTCAGTaGCCACTGGGTCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEFCIFQ*PLGLSR
Trigger: TCTGGAAAGACCCAGTGGGCACTGAAATATGCAAAA...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAGGGCAGAAGCTTCCTTaGCTCCTCCTTGTACTTAGT +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKGQKLP*LLLVLS
Trigger: ACTAAGTACAAGGAGGAGGCAAGGAAGCTTCTGCCC...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAATTCATTGGGAGATTCTaGGTTACCTTTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEFIGRF*VTFASK
Trigger: CTTTGAGGCAAAGGTAACCCAGAATCTCCCAATGAA...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTCCTCACATTCCTCTATaGTCTTGGGAGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPAPHIPL*SWEGLQ
Trigger: CTGCAGTCCCTCCCAAGACCATAGAGGAATGTGAGG...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTAATAGAACCACCCACTaGCAGTCTCCATGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCNRTTH*QSPCLS
Trigger: GCTGAGGCATGGAGACTGCCAGTGGGTGGTTCTATT...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGTTTACAGGCTCCATGTaGTGTTTTTCTCACAAGCTT +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGFTGSM*CFSHKL
Trigger: AAGCTTGTGAGAAAAACACCACATGGAGCCTGTAAA...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTTCCCACCCATATTCTTaGACCCAGCAACCTACAGCT +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPASHPYS*TQQPTA
Trigger: AGCTGTAGGTTGCTGGGTTCAAGAATATGGGTGGGA...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGAACTGAAGCTAGACATTaGAAGAGCATTCCATATCCC +
Preference number: 4 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGTEARH*KSIPYP
Trigger: GGGATATGGAATGCTCTTTCAATGTCTAGCTTCAGT...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTGTATGTGGTGTCTGCTaGGTAAGCTCTTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPAVCGVC*VSSWLT
Trigger: TGTCAGCCAAGAGCTTACTCAGCAGACACCACATAC...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAACTACAACACAATTTTTaGAGAGGACATGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKELQHNF*RGHGVE
Trigger: TTCTACCCCATGTCCTCTGCAAAAATTGTGTTGTAG...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAGGCAGCCCTAAGTGCTaGTTTCTGCGCAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKGSPKC*FLRKCF
Trigger: AAAACATTTGCGCAGAAAGCAGCACTTAGGGCTGCC...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCAGGGGCAGGCTATTCTaGTCTGCCATCAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCRGRLF*SAIKDS
Trigger: ACTGTCCTTGATGGCAGAGCAGAATAGCCTGCCCCT...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGATGCTTTACAGGTTGTaGAAAAACATTTACAGGCTC +
Preference number: 4 (lower is better)
Translates to: VTNETIPTEGSWLEASLGMLYRL*KNIYRL
Trigger: GAGCCTGTAAATGTTTTTGCACAACCTGTAAAGCAT...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTATTCCTCTATGGTCTTaGGAGGGACTGCAGTGCGTA +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPAIPLWS*EGLQCV
Trigger: TACGCACTGCAGTCCCTCCCAAGACCATAGAGGAAT...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAAACAGAGACTAGAGACTaGCAAATCACAATCTTTAGG +
Preference number: 4 (lower is better)
Translates to: KPPSPPDHISQKGKVGKETETRD*QITIFR
Trigger: CCTAAAGATTGTGATTTGCCAGTCTCTAGTCTCTGT...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAAAGGGCTCCTCCTTCTaGCCGAAGTTTAATTCTACA +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKKGSSF*PKFNST
Trigger: TGTAGAATTAAACTTCGGTCAGAAGGAGGAGCCCTT...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTTGCTGTGTTTTCGTGTaGGCTGAAACCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPACCVFV*AETLRN
Trigger: GTTTCTCAGGGTTTCAGCTCACACGAAAACACAGCA...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTGACTTTTCACTATCCTaGTCATCTCCCTGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPADFSLS*SSPCSS
Trigger: CGAGGAACAGGGAGATGACCAGGATAGTGAAAAGTC...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAAAAAGGTCTCGGCTTTTaGGGTCCATCTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQKGLGF*GPSLAP
Trigger: AGGAGCCAGAGATGGACCCCAAAAGCCGAGACCTTT...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAATCACTCTCCTTTACTTaGCTGCCAGTCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQSLSFT*LPVQLP
Trigger: AGGCAGCTGGACTGGCAGCCAAGTAAAGGAGAGTGA...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCCAGGCACAGCATGAATaGACACAAACTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCQAQHE*TQTLLV
Trigger: CACCAGAAGAGTTTGTGTTCATTCATGCTGTGCCTG...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAAACACAGAAATCCATTTaGGGACACCGCAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQTQKSI*GHRREA
Trigger: TGCTTCCCTGCGGTGTCCTCAAATGGATTTCTGTGT...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAACTCACTAGGAACTGCTaGAGTATGTGGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQLTRNC*SMWCLL
Trigger: CAGCAGACACCACATACTGCAGCAGTTCCTAGTGAG...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAATATTTCAGTGCCCACTaGGTCTTTCCAGATCCGGGT +
Preference number: 4 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQYFSAH*VFPDPG
Trigger: ACCCGGATCTGGAAAGACCCAGTGGGCACTGAAATA...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAATATACATATCCCGCTaGAGTGAAAAGAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKIYISR*SEKNPA
Trigger: AGCAGGATTCTTTTCACTGCAGCGGGATATGTATAT...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CAA 72 bp GACATTGAAAGAGCATTCCATATCCCACCCATATTCTaGAACCCAGCAACCTACAGCTGTCTATCAAGAACT +
Preference number: 4 (lower is better)
Translates to: DIERAFHIPPIF*NPATYSCLSRT
Trigger: AGTTCTTGATAGACAGCTGTAGGTTGCTGGGTTCAAGAATATGGGTGGGATATGGAATGCTCTTTCAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR TCA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAATTTACCTCCTTGCCTTaGCATTATAAGCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKFTSLP*HYKQSF
Trigger: AAAGCTTTGCTTATAATGTCAAGGCAAGGAGGTAAA...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCATGCAATCACTCCACTaGCACACAGAAATCCATTTG +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCMQSLH*HTEIHL
Trigger: CAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCAT...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCAATAGCTTCCGCCGTTaGCCAGAATTGTACACATTA +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCNSFRR*PELYTL
Trigger: TAATGTGTACAATTCTGGCCAACGGCGGAAGCTATT...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCCAGGCTTTCTTGGCCTaGGAATCCTGTAAAATAGAA +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCQAFLA*ESCKIE
Trigger: TTCTATTTTACAGGATTCCCAGGCCAAGAAAGCCTG...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR GCA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTTTACAGAAAAATTCATaGAATCACTCCACTGCCACA +
Preference number: 4 (lower is better)
Translates to: TPQDSPIYISRCSEKNPALQKNS*NHSTAT
Trigger: TGTGGCAGTGGAGTGATTGCATGAATTTTTCTGTAA...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTTCTCCCCAAAAGTCTaGCCAAATTCCTCAAATTGT +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCFSPKV*PNSSNC
Trigger: ACAATTTGAGGAATTTGGCCAGACTTTTGGGGAGAA...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAAACAGGAATTAATCAATaGGTCTATAGAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQTGINQ*VYRRGR
Trigger: CCTGCCCCTTCTATAGACCCATTGATTAATTCCTGT...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CCA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTTGCAAATGATCTCTTaGACTAAACCAACAAGGATG +
Preference number: 4 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCLQMIS*TKPTRM
Trigger: CATCCTTGTTGGTTTAGTCCAAGAGATCATTTGCAA...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
3UTR CAA 72 bp AATAAAAAGACAGAAACAAAACCCGGACATCTACTGTaGTTGCAAATGATCTCTTGGACTAAACCAACAAGG +
Preference number: 4 (lower is better)
Translates to: NKKTETKPGHLL*LQMISWTKPTR
Trigger: CCTTGTTGGTTTAGTCCAAGAGATCATTTGCAACAACAGTAGATGTCCGGGTTTTGTTTCTGTCTTTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 90 bp CCGCCGCCGGCCTCGTCCTCGAGCATCTCGGCGTCCAGCGCCTCCTaGAGCCGCTGCGCCAGATCCACCTTGAGGCCGCGCGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PPPASSSSISASSAS*SRCARSTLRPRESR
Trigger: CCTGGACTCGCGCGGCCTCAAGGTGGATCTGGCGCAGCGGCTGCAGGAGGCGCTGGACGCCGAGATGCTCGAGGACGAGGCCGGCGGCGG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CCA 90 bp CGAGGCCCTGCTCTTCGCCACCATTTACCCCGCCTGACCCGGCCGTaGCCTCCGCCGGCTTCTCGGAAGCATCTGGCTCGGCCGCGGCCT +
Preference number: 5 (lower is better)
Translates to: RGPALRHHLPRLTRP*PPPASRKHLARPRP
Trigger: AGGCCGCGGCCGAGCCAGATGCTTCCGAGAAGCCGGCGGAGGCCACGGCCGGGTCAGGCGGGGTAAATGGTGGCGAAGAGCAGGGCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 90 bp CGCACGCAGGAGCGGAGGCCGCGCACGGTCCCGCTGCGCAGTGTTTaGTTCTCCTTCGTCTCCCCTCCCCCTTTCGGCTCACGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: RTQERRPRTVPLRSV*FSFVSPPPFGSRSP
Trigger: TGGGCTCCGTGAGCCGAAAGGGGGAGGGGAGACGAAGGAGAAGCAAACACTGCGCAGCGGGACCGTGCGCGGCCTCCGCTCCTGCGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 90 bp GAGCGAGCGCACGCACGCAGGAGCGGAGGCCGCGCACGGTCCCGCTaGGCAGTGTTTGCTTCTCCTTCGTCTCCCCTCCCCCTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: ERAHARRSGGRARSR*AVFASPSSPLPLSA
Trigger: AGCCGAAAGGGGGAGGGGAGACGAAGGAGAAGCAAACACTGCGCAGCGGGACCGTGCGCGGCCTCCGCTCCTGCGTGCGTGCGCTCGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 90 bp CCGCTCCGCTCCTCGGGTTCGTCTTCCTCCCTCTTGCCGAGGCCCTaGTCTTCGCCACCATTTACCCCGCCTGACCCGGCCGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PLRSSGSSSSLLPRP*SSPPFTPPDPAVAS
Trigger: GGAGGCCACGGCCGGGTCAGGCGGGGTAAATGGTGGCGAAGAGCAGGGCCTCGGCAAGAGGGAGGAAGACGAACCCGAGGAGCGGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS TCA 90 bp CTCCCTCTTGCCGAGGCCCTGCTCTTCGCCACCATTTACCCCGCCTaGCCCGGCCGTGGCCTCCGCCGGCTTCTCGGAAGCATCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LPLAEALLFATIYPA*PGRGLRRLLGSIWL
Trigger: GAGCCAGATGCTTCCGAGAAGCCGGCGGAGGCCACGGCCGGGTCAGGCGGGGTAAATGGTGGCGAAGAGCAGGGCCTCGGCAAGAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 90 bp GCGTCTCGTCCCCGCTCCGCTCCTCGGGTTCGTCTTCCTCCCTCTTaGCGAGGCCCTGCTCTTCGCCACCATTTACCCCGCCTGACCCGG +
Preference number: 5 (lower is better)
Translates to: ASRPRSAPRVRLPPS*RGPALRHHLPRLTR
Trigger: CCGGGTCAGGCGGGGTAAATGGTGGCGAAGAGCAGGGCCTCGGCAAGAGGGAGGAAGACGAACCCGAGGAGCGGAGCGGGGACGAGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCGGTTGTTTCGGCGATTaGTCCGCTTCTCGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLGCFGD*SASRRG
Trigger: CCCCCTCCGAGAAGCGGACAAATCGCCGAAACAACC...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CCTGCCTGCTCCTACCTGCTGTGGAGAGCACCCTCGCGCTGCCTCCCCACCCTCTGGGGTCAGAGGTATTaGGGCGGAAGGGTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: PACSYLLWRAPSRCLPTLWGQRY*GGRVCH
Trigger: ATGACACACCCTTCCGCCCAAATACCTCTGACCCCA...GAGGGTGGGGAGGCAGCGCGAGGGTGCTCTCCACAGCAGGTAGGAGCAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACTGTTCCTCGGCGGCCTaGTCACCCGGCACCTCGGAT +
Preference number: 5 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHCSSAA*SPGTSD
Trigger: ATCCGAGGTGCCGGGTGACAAGGCCGCCGAGGAACA...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACACCCGCCCACATAGCCTaGGCCCCGGCTTCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: TNETIPTEGSWLEASLGTPAHIA*APASVL
Trigger: CAGAACCGAAGCCGGGGCCAAGGCTATGTGGGCGGG...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS TCA 90 bp TTGGGAGGGACTGCAGTGCGTACACGCTCCTCAACAGGCACAGCATaGATGAACACAAACTCTTCTGGTGGTGGGAAGAAGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LGGTAVRTRSSTGTA*MNTNSSGGGKKGSS
Trigger: GGAGGAGCCCTTCTTCCCACCACCAGAAGAGTTTGTGTTCATTCATGCTGTGCCTGTTGAGGAGCGTGTACGCACTGCAGTCCCTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAATGCGCCAGATCCACCTaGAGGCCGCGCGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKCARST*RPRESR
Trigger: CCTGGACTCGCGCGGCCTCAAGGTGGATCTGGCGCA...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS TCA 90 bp GAGGGACTGCAGTGCGTACACGCTCCTCAACAGGCACAGCATGAATaGACACAAACTCTTCTGGTGGTGGGAAGAAGGGCTCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: EGLQCVHAPQQAQHE*TQTLLVVGRRAPPS
Trigger: AGAAGGAGGAGCCCTTCTTCCCACCACCAGAAGAGTTTGTGTTCATTCATGCTGTGCCTGTTGAGGAGCGTGTACGCACTGCAGTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGAAAAGGTCTCGGCTTTaGGGGTCCATCTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: VTNETIPTEGSWLEASLGKRSRL*GSISGS
Trigger: GGAGCCAGAGATGGACCCCAAAAGCCGAGACCTTTT...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CCA 90 bp TTCCCTTTGTCACTCCGTAAGTACTCCTTGCCCCAGACCAAAGGGTaGGGAACTTCTCTGAGAAAAGTGGCTGCCCTCCATAGCGGTCTT +
Preference number: 5 (lower is better)
Translates to: FPLSLRKYSLPQTKG*GTSLRKVAALHSGL
Trigger: AAGACCGCTATGGAGGGCAGCCACTTTTCTCAGAGAAGTTCCCCACCCTTTGGTCTGGGGCAAGGAGTACTTACGGAGTGACAAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301785.7
ENST00000540127.1
CDS-3UTR CAA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAAATCACTCTCCTTTACTaGGCTGCCAGTCCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEITLLY*AASPAA
Trigger: GGCAGCTGGACTGGCAGCCAAGTAAAGGAGAGTGAT...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGCACACAGAAATCCATTaGAGGACACCGCAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: VTNETIPTEGSWLEASLGHTEIH*RTPQGS
Trigger: GCTTCCCTGCGGTGTCCTCAAATGGATTTCTGTGTG...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 90 bp CACCATCAGAATCACCTCACATTCCTCTATGGTCTTGGGAGGGACTaGAGTGCGTACACGCTCCTCAACAGGCACAGCATGAATGAACAC +
Preference number: 5 (lower is better)
Translates to: HHQNHLTFLYGLGRD*SAYTLLNRHSMNEH
Trigger: GTGTTCATTCATGCTGTGCCTGTTGAGGAGCGTGTACGCACTGCAGTCCCTCCCAAGACCATAGAGGAATGTGAGGTGATTCTGATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTCCCGCTGCGCAGTGTTaGCTTCTCCTTCGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: TPQDSPIYISRCSEKNPAPAAQC*LLLRLP
Trigger: GGGGAGACGAAGGAGAAGCAAACACTGCGCAGCGGG...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGTTCCGAGAGAAGGTCTaGAACAGCAATAGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: VTNETIPTEGSWLEASLGFREKV*NSNSFR
Trigger: GCGGAAGCTATTGCTGTTCAAGACCTTCTCTCGGAA...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAATTCTGCCGGTTACGCTaGTTTCGGTTGTTTCGGCGA +
Preference number: 5 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEFCRLR*FRLFRR
Trigger: TCGCCGAAACAACCGAAACAAGCGTAACCGGCAGAA...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAGAGGCAGTGGAGACTTaGAGCGGCTGTGGTAAGCCT +
Preference number: 5 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKEAVET*SGCGKP
Trigger: AGGCTTACCACAGCCGCTCAAAGTCTCCACTGCCTC...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAAGCGGTCTTTGCTCACTaGAAAATGCAGATCCGAGGT +
Preference number: 5 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEAVFAH*KMQIRG
Trigger: ACCTCGGATCTGCATTTTCAAGTGAGCAAAGACCGC...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp AAGCCTCCCAGCCCACCAGACCACATATCCCAAAAGGGAAAGGTCGGTAAAGAATTCCTTGCCTCCTCCTaGTACTTAGTGACAATGGGC +
Preference number: 5 (lower is better)
Translates to: KPPSPPDHISQKGKVGKEFLASS*YLVTMG
Trigger: GCCCATTGTCACTAAGTACAAGGAGGAGGCAAGGAA...TTCTTTACCGACCTTTCCCTTTTGGGATATGTGGTCTGGTGGGCTGGGAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp ACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGACAATCCCACCCATATTCTaGAACCCAGCAACCTACAGC +
Preference number: 5 (lower is better)
Translates to: TNETIPTEGSWLEASLGTIPPIF*NPATYS
Trigger: GCTGTAGGTTGCTGGGTTCAAGAATATGGGTGGGAT...TGTCCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAAGCCCCATTCCAGCCTaGGGGTCAGAGGTATTTGGG +
Preference number: 5 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKSPIPA*GSEVFG
Trigger: CCCAAATACCTCTGACCCCAAGGCTGGAATGGGGCT...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTCTCCGTAAGTACTCCTaGCCCCAGACCAAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: TPQDSPIYISRCSEKNPALRKYS*PQTKGW
Trigger: CCACCCTTTGGTCTGGGGCAAGGAGTACTTACGGAG...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTTCCTTGGTTGTGTTTaGCGGGGGTGCCTGGCACCC +
Preference number: 5 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCFLGCV*RGCLAP
Trigger: GGGTGCCAGGCACCCCCGCAAAACACAACCAAGGAA...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 90 bp GGGAAAAATCAACAGACCACCCAACTCGAAGGAGAGAGACCTCTGTaGAGCCTTCTTTCATTGGGAGATTCTGGGTTACCTTTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: GKNQQTTQLEGERPL*SLLSLGDSGLPLPQ
Trigger: TTGAGGCAAAGGTAACCCAGAATCTCCCAATGAAAGAAGGCTGCACAGAGGTCTCTCTCCTTCGAGTTGGGTGGTCTGTTGATTTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAATCTGCCAGGGAATCCTaGCTGATCCAGAATGCCACA +
Preference number: 5 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKSARES*LIQNAT
Trigger: TGTGGCATTCTGGATCAGCAAGGATTCCCTGGCAGA...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGTCTCAGGGTTTTCTTTaGCATATTTCAGTGCCCACT +
Preference number: 5 (lower is better)
Translates to: VTNETIPTEGSWLEASLGSQGFL*HISVPT
Trigger: AGTGGGCACTGAAATATGCAAAAGAAAACCCTGAGA...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CCTTGGGGTCAGAGGTATTTGGGCGGAAGGGTGTGTCATGACAGACAAGGACACCCAATCCCGATTGTATaGTCTGTAATAGTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: PWGQRYLGGRVCHDRQGHPIPIV*SVIVSV
Trigger: TACAGAGACTATTACAGACAATACAATCGGGATTGG...GTGTCCTTGTCTGTCATGACACACCCTTCCGCCCAAATACCTCTGACCCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp TTCATGCAATCACTCCACTGCCACACAGAAATCCATTTGAGGACACCGCAGGGACCCGGACATCTACTGTaGTTGCAAATGATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: FMQSLHCHTEIHLRTPQGPGHLL*LQMISW
Trigger: CCAAGAGATCATTTGCAACAACAGTAGATGTCCGGG...TCCCTGCGGTGTCCTCAAATGGATTTCTGTGTGGCAGTGGAGTGATTGCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GTCACAAATGAAACTATCCCAACTGAAGGCTCCTGGCTAGAGGCCTCTCTGGGGAAACTGGAAGCTACTTaGCCTACATTTTCGCCAGAA +
Preference number: 5 (lower is better)
Translates to: VTNETIPTEGSWLEASLGKLEAT*PTFSPE
Trigger: TTCTGGCGAAAATGTAGGCAAAGTAGCTTCCAGTTT...CCCCAGAGAGGCCTCTAGCCAGGAGCCTTCAGTTGGGATAGTTTCATTTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAACTGAGCCTGCTGGTTTaGACTTTTCACTATCCTGGT +
Preference number: 5 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKLSLLV*TFHYPG
Trigger: ACCAGGATAGTGAAAAGTCAAAACCAGCAGGCTCAG...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAACATTCCTCTATGGTCTaGGGAGGGACTGCAGTGCGT +
Preference number: 5 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQHSSMV*GGTAVR
Trigger: ACGCACTGCAGTCCCTCCCAAGACCATAGAGGAATG...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAAACCCTTCATCCTCATTaGATTGAGCACAGTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKTLHPH*IEHSLS
Trigger: GCTGAGACTGTGCTCAATCAAATGAGGATGAAGGGT...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTGCTTCACCGATACCCTaGGTACCCGTAGTAATTCCT +
Preference number: 5 (lower is better)
Translates to: TPQDSPIYISRCSEKNPAASPIP*VPVVIP
Trigger: AGGAATTACTACGGGTACCAAGGGTATCGGTGAAGC...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAACTGCTGAGTAAGCTCTaGGCTGACAGTGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQLLSKL*ADSAEQ
Trigger: CTGCTCAGCACTGTCAGCCAAGAGCTTACTCAGCAG...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTTTAGTTTAGTCCCCTaGCCCCTAAGGGCCCTAGCA +
Preference number: 5 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCFSLVP*PLRALA
Trigger: TGCTAGGGCCCTTAGGGGCAAGGGGACTAAACTAAA...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTTGCAGCCTTCTTTCATaGGGAGATTCTGGGTTACCT +
Preference number: 5 (lower is better)
Translates to: TPQDSPIYISRCSEKNPACSLLS*GDSGLP
Trigger: AGGTAACCCAGAATCTCCCAATGAAAGAAGGCTGCA...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp ACACCACAGGATTCACCTATATACATATCCCGCTGCAGTGAAAAGAATCCTGCTTGTCCATTTTCTGCCTaGAGTCCTCGTCCATCGAAA +
Preference number: 5 (lower is better)
Translates to: TPQDSPIYISRCSEKNPACPFSA*SPRPSK
Trigger: TTTCGATGGACGAGGACTCAAGGCAGAAAATGGACA...AGCAGGATTCTTTTCACTGCAGCGGGATATGTATATAGGTGAATCCTGTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp CTTTCTAGTGTCAAATATCAACAGCGAGTACCTCCCCTAACCCCTGCTGGAAAATCAGGCAAAGAGAAGTaGGCTTTCATCTCCAGCATT +
Preference number: 5 (lower is better)
Translates to: LSSVKYQQRVPPLTPAGKSGKEK*AFISSI
Trigger: AATGCTGGAGATGAAAGCCAACTTCTCTTTGCCTGA...TTTTCCAGCAGGGGTTAGGGGAGGTACTCGCTGTTGATATTTGACACTAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTTACGCTTGTTTCGGTaGTTTCGGCGATTTGTCCGC +
Preference number: 5 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCLRLFR*FRRFVR
Trigger: GCGGACAAATCGCCGAAACAACCGAAACAAGCGTAA...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS TCA 90 bp ATGAACACAAACTCTTCTGGTGGTGGGAAGAAGGGCTCCTCCTTCTaGCCGAAGTTTAATTCTACAACACAATTTTTGCAGAGGACATGG +
Preference number: 5 (lower is better)
Translates to: MNTNSSGGGKKGSSF*PKFNSTTQFLQRTW
Trigger: CCATGTCCTCTGCAAAAATTGTGTTGTAGAATTAAACTTCGGTCAGAAGGAGGAGCCCTTCTTCCCACCACCAGAAGAGTTTGTGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTGATTCTGGGTTACCTTaGCCTCAAAGCAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCDSGLP*PQSRLF
Trigger: GAAAAGTCTGCTTTGAGGCAAAGGTAACCCAGAATC...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTCCTAAGGGAATTTCTTaGGGCTCCAGTTTTTACCTC +
Preference number: 5 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCPKGIS*GSSFYL
Trigger: GAGGTAAAAACTGGAGCCCAAAGAAATTCCCTTAGG...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCCAGGTTCACAAGAGTTaGATCCTCCTCCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCQVHKS*ILLLIF
Trigger: AAAGATGAGGAGGAGGATCAAACTCTTGTGAACCTG...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAAAGCAGACTTTTCCCTTaGTCACTCCGTAAGTACTCC +
Preference number: 5 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQSRLFP*SLRKYS
Trigger: GGAGTACTTACGGAGTGACAAAGGGAAAAGTCTGCT...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCTGCAGTATGTGGTGTAGAACTGGGAGGGTATaGGTAAAGTCACAAATGAAA +
Preference number: 5 (lower is better)
Translates to: AFSSGTDFLTRNCCSMWCRTGRV*VKSQMK
Trigger: TTTCATTTGTGACTTTACCAATACCCTCCCAGTTCT...ACACCACATACTGCAGCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp TCGCCAGAATGGTGTAATGAGAACAGGGGAGGAAAAAGTTACAGATGTAAACAAGGACATCTACTGTTGTaGCAAATGATCTCTTGGACT +
Preference number: 5 (lower is better)
Translates to: SPEWCNENRGGKSYRCKQGHLLL*QMISWT
Trigger: AGTCCAAGAGATCATTTGCAACAACAGTAGATGTCC...TTGTTTACATCTGTAACTTTTTCCTCCCCTGTTCTCATTACACCATTCTGGCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS-3UTR CAA 90 bp GGAAATGGAAGTGAAGCATTTTCTAGTGGCACAGATTTTCTCACTAGGAACTGCAGAATGCTTTACAGGTaGTGCAAAAACATTTACAGG +
Preference number: 5 (lower is better)
Translates to: GNGSEAFSSGTDFLTRNCRMLYR*CKNIYR
Trigger: CCTGTAAATGTTTTTGCACAACCTGTAAAGCATTCT...GCAGTTCCTAGTGAGAAAATCTGTGCCACTAGAAAATGCTTCACTTCCATTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CCA 72 bp CCCGGCCGTGGCCTCCGCCGGCTTCTCGGAAGCATCTaGCTCGGCCGCGGCCTCCATGGCTGCCGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: PGRGLRRLLGSI*LGRGLHGCRLR
Trigger: CCGGAGGCGGCAGCCATGGAGGCCGCGGCCGAGCCAGATGCTTCCGAGAAGCCGGCGGAGGCCACGGCCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 90 bp ACGCACGCAGGAGCGGAGGCCGCGCACGGTCCCGCTGCGCAGTGTTaGCTTCTCCTTCGTCTCCCCTCCCCCTTTCGGCTCACGGAGCCC +
Preference number: 6 (lower is better)
Translates to: THAGAEAAHGPAAQC*LLLRLPSPFRLTEP
Trigger: GGGCTCCGTGAGCCGAAAGGGGGAGGGGAGACGAAGGAGAAGCAAACACTGCGCAGCGGGACCGTGCGCGGCCTCCGCTCCTGCGTGCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CCA 72 bp GCTCTTCGCCACCATTTACCCCGCCTGACCCGGCCGTaGCCTCCGCCGGCTTCTCGGAAGCATCTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: ALRHHLPRLTRP*PPPASRKHLAR
Trigger: CCGAGCCAGATGCTTCCGAGAAGCCGGCGGAGGCCACGGCCGGGTCAGGCGGGGTAAATGGTGGCGAAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp GGAGCGGAGGCCGCGCACGGTCCCGCTGCGCAGTGTTaGCTTCTCCTTCGTCTCCCCTCCCCCTTTCGGCTC +
Preference number: 6 (lower is better)
Translates to: GAEAAHGPAAQC*LLLRLPSPFRL
Trigger: GAGCCGAAAGGGGGAGGGGAGACGAAGGAGAAGCAAACACTGCGCAGCGGGACCGTGCGCGGCCTCCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 72 bp GAGCGGAGGCCGCGCACGGTCCCGCTGCGCAGTGTTTaGTTCTCCTTCGTCTCCCCTCCCCCTTTCGGCTCA +
Preference number: 6 (lower is better)
Translates to: ERRPRTVPLRSV*FSFVSPPPFGS
Trigger: TGAGCCGAAAGGGGGAGGGGAGACGAAGGAGAAGCAAACACTGCGCAGCGGGACCGTGCGCGGCCTCCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 72 bp CCCCGCTCCGCTCCTCGGGTTCGTCTTCCTCCCTCTTaGCGAGGCCCTGCTCTTCGCCACCATTTACCCCGC +
Preference number: 6 (lower is better)
Translates to: PRSAPRVRLPPS*RGPALRHHLPR
Trigger: GCGGGGTAAATGGTGGCGAAGAGCAGGGCCTCGGCAAGAGGGAGGAAGACGAACCCGAGGAGCGGAGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 72 bp TCCTCGGGTTCGTCTTCCTCCCTCTTGCCGAGGCCCTaGTCTTCGCCACCATTTACCCCGCCTGACCCGGCC +
Preference number: 6 (lower is better)
Translates to: SSGSSSSLLPRP*SSPPFTPPDPA
Trigger: GGCCGGGTCAGGCGGGGTAAATGGTGGCGAAGAGCAGGGCCTCGGCAAGAGGGAGGAAGACGAACCCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp TCACTATCCTGGTCATCTCCCTGTTCCTCGGCGGCCTaGTCACCCGGCACCTCGGATCCCGGCGTCTCGTCC +
Preference number: 6 (lower is better)
Translates to: SLSWSSPCSSAA*SPGTSDPGVSS
Trigger: GGACGAGACGCCGGGATCCGAGGTGCCGGGTGACAAGGCCGCCGAGGAACAGGGAGATGACCAGGATAGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp ACATGGGGTAGAAGGGCCCGGTCTGCCAGGGAATCCTaGCTGATCCAGAATGCCACACCTAGGTCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: TWGRRARSARES*LIQNATPRSSP
Trigger: TGGAGAAGACCTAGGTGTGGCATTCTGGATCAGCAAGGATTCCCTGGCAGACCGGGCCCTTCTACCCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 90 bp TTGCAGAGGACATGGGGTAGAAGGGCCCGGTCTGCCAGGGAATCCTaGCTGATCCAGAATGCCACACCTAGGTCTTCTCCATTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: LQRTWGRRARSARES*LIQNATPRSSPFLE
Trigger: CTCCAAGAATGGAGAAGACCTAGGTGTGGCATTCTGGATCAGCAAGGATTCCCTGGCAGACCGGGCCCTTCTACCCCATGTCCTCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CCA 72 bp ACTGGGAGGCTTGCTGAACTAAAAGGTCTCGGCTTTTaGGGTCCATCTCTGGCTCCTCGAGACCCTTCATCC +
Preference number: 6 (lower is better)
Translates to: TGRLAELKGLGF*GPSLAPRDPSS
Trigger: GGATGAAGGGTCTCGAGGAGCCAGAGATGGACCCCAAAAGCCGAGACCTTTTAGTTCAGCAAGCCTCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 72 bp AATCACCTCACATTCCTCTATGGTCTTGGGAGGGACTaGAGTGCGTACACGCTCCTCAACAGGCACAGCATG +
Preference number: 6 (lower is better)
Translates to: NHLTFLYGLGRD*SAYTLLNRHSM
Trigger: CATGCTGTGCCTGTTGAGGAGCGTGTACGCACTGCAGTCCCTCCCAAGACCATAGAGGAATGTGAGGTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CCA 72 bp TCACTCCGTAAGTACTCCTTGCCCCAGACCAAAGGGTaGGGAACTTCTCTGAGAAAAGTGGCTGCCCTCCAT +
Preference number: 6 (lower is better)
Translates to: SLRKYSLPQTKG*GTSLRKVAALH
Trigger: ATGGAGGGCAGCCACTTTTCTCAGAGAAGTTCCCCACCCTTTGGTCTGGGGCAAGGAGTACTTACGGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301785.7
ENST00000540127.1
CDS CCA 72 bp CCACCATCAGAATCACCTCACATTCCTCTATGGTCTTaGGAGGGACTGCAGTGCGTACACGCTCCTCAACAG +
Preference number: 6 (lower is better)
Translates to: PPSESPHIPLWS*EGLQCVHAPQQ
Trigger: CTGTTGAGGAGCGTGTACGCACTGCAGTCCCTCCCAAGACCATAGAGGAATGTGAGGTGATTCTGATGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CCA 72 bp GTAGTCCCACCATCAGAATCACCTCACATTCCTCTATaGTCTTGGGAGGGACTGCAGTGCGTACACGCTCCT +
Preference number: 6 (lower is better)
Translates to: VVPPSESPHIPL*SWEGLQCVHAP
Trigger: AGGAGCGTGTACGCACTGCAGTCCCTCCCAAGACCATAGAGGAATGTGAGGTGATTCTGATGGTGGGACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp CCCACCATCAGAATCACCTCACATTCCTCTATGGTCTaGGGAGGGACTGCAGTGCGTACACGCTCCTCAACA +
Preference number: 6 (lower is better)
Translates to: PTIRITSHSSMV*GGTAVRTRSST
Trigger: TGTTGAGGAGCGTGTACGCACTGCAGTCCCTCCCAAGACCATAGAGGAATGTGAGGTGATTCTGATGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS TCA 72 bp TTCCTTGCCTCCTCCTTGTACTTAGTGACAATGGGCTaGGCTTCCTCCTTCTCCAGCTCCCCATATGTCACC +
Preference number: 6 (lower is better)
Translates to: FLASSLYLVTMG*ASSFSSSPYVT
Trigger: GGTGACATATGGGGAGCTGGAGAAGGAGGAAGCTCAGCCCATTGTCACTAAGTACAAGGAGGAGGCAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 72 bp CAACAGACCACCCAACTCGAAGGAGAGAGACCTCTGTaGAGCCTTCTTTCATTGGGAGATTCTGGGTTACCT +
Preference number: 6 (lower is better)
Translates to: QQTTQLEGERPL*SLLSLGDSGLP
Trigger: AGGTAACCCAGAATCTCCCAATGAAAGAAGGCTGCACAGAGGTCTCTCTCCTTCGAGTTGGGTGGTCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp TTAGGGACAACCACCACCACTTTCCGAGAGAAGGTCTaGAACAGCAATAGCTTCCGCCGTTGGCCAGAATTG +
Preference number: 6 (lower is better)
Translates to: LGTTTTTFREKV*NSNSFRRWPEL
Trigger: CAATTCTGGCCAACGGCGGAAGCTATTGCTGTTCAAGACCTTCTCTCGGAAAGTGGTGGTGGTTGTCCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CCA 72 bp TCGAAGGAGAGAGACCTCTGTGCAGCCTTCTTTCATTaGGAGATTCTGGGTTACCTTTGCCTCAAAGCAGAC +
Preference number: 6 (lower is better)
Translates to: SKERDLCAAFFH*EILGYLCLKAD
Trigger: GTCTGCTTTGAGGCAAAGGTAACCCAGAATCTCCCAATGAAAGAAGGCTGCACAGAGGTCTCTCTCCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp GAAAAGTGGCTGCCCTCCATAGCGGTCTTTGCTCACTaGAAAATGCAGATCCGAGGTATACGTGTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: EKWLPSIAVFAH*KMQIRGIRVQV
Trigger: AACCTGGACACGTATACCTCGGATCTGCATTTTCAAGTGAGCAAAGACCGCTATGGAGGGCAGCCACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp CTCGAAGGAGAGAGACCTCTGTGCAGCCTTCTTTCATaGGGAGATTCTGGGTTACCTTTGCCTCAAAGCAGA +
Preference number: 6 (lower is better)
Translates to: LEGERPLCSLLS*GDSGLPLPQSR
Trigger: TCTGCTTTGAGGCAAAGGTAACCCAGAATCTCCCAATGAAAGAAGGCTGCACAGAGGTCTCTCTCCTTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS GCA 72 bp TCTCTGAGAAAAGTGGCTGCCCTCCATAGCGGTCTTTaGTCACTTGAAAATGCAGATCCGAGGTATACGTGT +
Preference number: 6 (lower is better)
Translates to: SLRKVAALHSGL*SLENADPRYTC
Trigger: ACACGTATACCTCGGATCTGCATTTTCAAGTGAGCAAAGACCGCTATGGAGGGCAGCCACTTTTCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp CAGATCCGAGGTATACGTGTCCAGGTTCACAAGAGTTaGATCCTCCTCCTCATCTTTTGCCTCTTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: QIRGIRVQVHKS*ILLLIFCLFFR
Trigger: CCTGAAGAAGAGGCAAAAGATGAGGAGGAGGATCAAACTCTTGTGAACCTGGACACGTATACCTCGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp TCTGGGTTACCTTTGCCTCAAAGCAGACTTTTCCCTTaGTCACTCCGTAAGTACTCCTTGCCCCAGACCAAA +
Preference number: 6 (lower is better)
Translates to: SGLPLPQSRLFP*SLRKYSLPQTK
Trigger: TTTGGTCTGGGGCAAGGAGTACTTACGGAGTGACAAAGGGAAAAGTCTGCTTTGAGGCAAAGGTAACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301785.7
ENST00000540127.1
CDS CAA 90 bp CAGTCTCAGCTCCCAGGACATTGTATCTTTTCTCAGGGTTTTCTTTaGCATATTTCAGTGCCCACTGGGTCTTTCCAGATCCGGGTAGTC +
Preference number: 6 (lower is better)
Translates to: QSQLPGHCIFSQGFL*HISVPTGSFQIRVV
Trigger: GACTACCCGGATCTGGAAAGACCCAGTGGGCACTGAAATATGCAAAAGAAAACCCTGAGAAAAGATACAATGTCCTGGGAGCTGAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 90 bp TCTTCCTCATTAGGGACAACCACCACCACTTTCCGAGAGAAGGTCTaGAACAGCAATAGCTTCCGCCGTTGGCCAGAATTGTACACATTA +
Preference number: 6 (lower is better)
Translates to: SSSLGTTTTTFREKV*NSNSFRRWPELYTL
Trigger: TAATGTGTACAATTCTGGCCAACGGCGGAAGCTATTGCTGTTCAAGACCTTCTCTCGGAAAGTGGTGGTGGTTGTCCCTAATGAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301785.7
CDS CAA 72 bp TGCCTTATACATACACGTGTCCAGGTTCACAAGAGTTaGATCCTCCTCCTCATCTTTTGCCTCTTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: CLIHTRVQVHKS*ILLLIFCLFFR
Trigger: CCTGAAGAAGAGGCAAAAGATGAGGAGGAGGATCAAACTCTTGTGAACCTGGACACGTGTATGTATAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540127.1