RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HNRNPLL (Homo sapiens)

Ensembl gene IDs: ENSG00000143889

Ensembl transcript IDs: ENST00000272249.7, ENST00000358367.8, ENST00000378915.7, ENST00000409328.5, ENST00000409636.5, ENST00000410076.5, ENST00000425682.1, ENST00000441689.1, ENST00000449105.8, ENST00000488099.1, ENST00000498516.1, ENST00000608859.5

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGAGTCTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTaGATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTT +
Preference number: 1 (lower is better)
Translates to: ASLSFSEGFLLMPML*MMKCRVSLLESSIL
Trigger: AAGGATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAGACTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR TCA 90 bp GAGAGCTGCTTGGAGAAATGCAAGTCCTTGAACTGCGGGCGTGCCTaGATGTGTGGGCTCCTTGTTGAACTAAATATAAATAGCTCAGTA +
Preference number: 1 (lower is better)
Translates to: ESCLEKCKSLNCGRA*MCGLLVELNINSSV
Trigger: TACTGAGCTATTTATATTTAGTTCAACAAGGAGCCCACACATTCAGGCACGCCCGCAGTTCAAGGACTTGCATTTCTCCAAGCAGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR GCA 90 bp CTTAGATGCTTGGCCAGCACTTGTAAAGCGATTATTTTTGCTCATTaGAAAATCTTTGTAGCTGCTGGTACCATCCTCCAGCTCAAATAT +
Preference number: 1 (lower is better)
Translates to: LRCLASTCKAIIFAH*KIFVAAGTILQLKY
Trigger: ATATTTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTGCAATGAGCAAAAATAATCGCTTTACAAGTGCTGGCCAAGCATCTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR GCA 90 bp TGTGACAGCTCTTTCTACAGCATACTCATCACCCATTTCTACCAGTaGTGTACCAGGAATGGTCTTCATAAATTTTACCTTCTCAATATT +
Preference number: 1 (lower is better)
Translates to: CDSSFYSILITHFYQ*CTRNGLHKFYLLNI
Trigger: AATATTGAGAAGGTAAAATTTATGAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGAAAGAGCTGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR GCA 90 bp ATAATAATGCAAAACACAGGAGGGTGGCTGGATTATATTCTTAGATaGTTGGCCAGCACTTGTAAAGCGATTATTTTTGCTCATTGCAAA +
Preference number: 1 (lower is better)
Translates to: IIMQNTGGWLDYILR*LASTCKAIIFAHCK
Trigger: TTTGCAATGAGCAAAAATAATCGCTTTACAAGTGCTGGCCAAGCATCTAAGAATATAATCCAGCCACCCTCCTGTGTTTTGCATTATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR CCA 90 bp GGCCCAACTTACCAACTAGTTTACTCCCAAACAATTCACTTATTTTaGTGGAGAGAGAGCCTTACAGATAAAAATCATTTCTACACATCT +
Preference number: 1 (lower is better)
Translates to: GPTYQLVYSQTIHLF*WRESLTDKNHFYTS
Trigger: AGATGTGTAGAAATGATTTTTATCTGTAAGGCTCTCTCTCCACCAAAATAAGTGAATTGTTTGGGAGTAAACTAGTTGGTAAGTTGGGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
3UTR-3UTR GCA 90 bp GTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAACTTGAACTGCGGGCGTaGCTGAATGTGTGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: VSLLESSILLNASSSLGELELRA*LNVWAP
Trigger: AGGAGCCCACACATTCAGGCACGCCCGCAGTTCAAG...TTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR TCA 90 bp ATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGAACTGCGGGCGTGCCTaGATGTGTGGGCTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: MMKCRVSLLESSILLNASNCGRA*MCGLLV
Trigger: AACAAGGAGCCCACACATTCAGGCACGCCCGCAGTT...CGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR TCA 90 bp GTGAATTGCGAGTCTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGAGAAATGCAAGTCCTTaGACTGCGGGCGTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: VNCESEFFRGLFADADVVRNASP*TAGVPE
Trigger: TTCAGGCACGCCCGCAGTTCAAGGACTTGCATTTCT...CACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAGACTCGCAATTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR CAA 90 bp ATTGCGAGTCTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTaGTGCATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATC +
Preference number: 2 (lower is better)
Translates to: IASLSFSEGFLLMPM*CMMKCRVSLLESSI
Trigger: GATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAGACTCGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR GCA 90 bp GTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAACATTACATGGCCTTTTaGAACAAAAGCATTCATCAA +
Preference number: 2 (lower is better)
Translates to: VSLLESSILLNASSSLGEHYMAF*NKSIHQ
Trigger: TTGATGAATGCTTTTGTTGCAAAAGGCCATGTAATG...TTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR CAA 90 bp AAGCAACAAGTTCAGGTGTATCTCGAGAGCCCATTCTGTAACGACTaGGTAAAGGCAATAATGGACCATGGGATCCATAGCCATCATGTC +
Preference number: 2 (lower is better)
Translates to: KQQVQVYLESPFCND*VKAIMDHGIHSHHV
Trigger: GACATGATGGCTATGGATCCCATGGTCCATTATTGCCTTTACCAAGTCGTTACAGAATGGGCTCTCGAGATACACCTGAACTTGTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR-3UTR TCA 90 bp TCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGGTCTTCACTAACCATTACAACTaGACCAGAGGGATTTCCTCC +
Preference number: 2 (lower is better)
Translates to: STAYSSPISTSAVPGMVFTNHYN*TRGISS
Trigger: GGAGGAAATCCCTCTGGTTCAGTTGTAATGGTTAGT...GAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR-3UTR CCA 90 bp TCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGGTCTTCAAAATGGCTTGTCTCTaGCGACCCTTTCCTCTATCT +
Preference number: 2 (lower is better)
Translates to: STAYSSPISTSAVPGMVFKMACL*RPFPLS
Trigger: AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTT...GAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTGGTGTTCTCCCAAAATaGCTTGTCTCTGGCGACCCT +
Preference number: 2 (lower is better)
Translates to: NLQTGLETEACQYKWTVTGVLPK*LVSGDP
Trigger: AGGGTCGCCAGAGACAAGCCATTTTGGGAGAACACC...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCAAAATCTTTGTAGCTaGTGGTACCATCCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: NLQTGLETEACQYKWTVTQNLCS*WYHPPA
Trigger: AGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR-3UTR GCA 90 bp TTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTAGAGTCCATAGAGAAGCAGTGTaGAAGTTTGCAGTTTGTAAG +
Preference number: 2 (lower is better)
Translates to: FSEGFLLMPMLCMMKCRVHREAV*KFAVCK
Trigger: CTTACAAACTGCAAACTTGCACACTGCTTCTCTATG...GACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR CCA 90 bp TTGAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCGTAGAGTCAGCCTGCTaGAGTCCTCTATCCTTCTTA +
Preference number: 2 (lower is better)
Translates to: LSIINSQDLLINWSWLFAVESAC*SPLSFL
Trigger: TAAGAAGGATAGAGGACTCCAGCAGGCTGACTCTAC...GGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR TCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTGTTATTCTAGGTAGATaGCACATATTCTCCCTTCTT +
Preference number: 2 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLVILGR*HIFSLL
Trigger: AAGAAGGGAGAATATGTGTCATCTACCTAGAATAAC...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
3UTR-3UTR CCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTATAAAATCTCCAAACTaGACTAGAAACAGAGGCATG +
Preference number: 2 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLIKSPN*TRNRGM
Trigger: CATGCCTCTGTTTCTAGTCCAGTTTGGAGATTTTAT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
3UTR-3UTR CCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTATTCACTTATTTTGGTaGAGAGAGAGCCTTACAGAT +
Preference number: 2 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLIHLFW*RESLTD
Trigger: ATCTGTAAGGCTCTCTCTCCACCAAAATAAGTGAAT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
3UTR-3UTR CCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTACAATTCACTTATTTTaGTGGAGAGAGAGCCTTACA +
Preference number: 2 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLTIHLF*WRESLT
Trigger: TGTAAGGCTCTCTCTCCACCAAAATAAGTGAATTGT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
3UTR-3UTR GCA 90 bp AGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATCTGATGCCGATGTTGTaGATGATGAAGTGTAGAGTC +
Preference number: 2 (lower is better)
Translates to: SIINSQDLLINWSWLFANLMPML*MMKCRV
Trigger: GACTCTACACTTCATCATGCACAACATCGGCATCAG...ATTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGTCTGAAGCCCACCCATaGATCCCAGATTATTATCTA +
Preference number: 2 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMSEAHP*IPDYYL
Trigger: TAGATAATAATCTGGGATCCATGGGTGGGCTTCAGA...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
3UTR-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTCCAGCTCAAATATTTaGCTTGGAACAACTGAATGT +
Preference number: 2 (lower is better)
Translates to: NLQTGLETEACQYKWTVTSSSNI*LGTTEC
Trigger: ACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR-3UTR GCA 90 bp AGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATGCAGTCAAGGTGAATTaGGAGTCTGAGTTTTTCAGA +
Preference number: 2 (lower is better)
Translates to: SIINSQDLLINWSWLFANAVKVN*ESEFFR
Trigger: TCTGAAAAACTCAGACTCGCAATTCACCTTGACTGC...ATTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR CCA 90 bp TTTTTCTATCTGTGTGGATTGGTTGAGCATTATCAATTCCCAAGACCTGTTAATCCTCCTTTAAAAACTTaGGGTGATGGTGCATGCAGT +
Preference number: 2 (lower is better)
Translates to: FFYLCGLVEHYQFPRPVNPPLKT*GDGACS
Trigger: ACTGCATGCACCATCACCCCAAGTTTTTAAAGGAGG...ATTAACAGGTCTTGGGAATTGATAATGCTCAACCAATCCACACAGATAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR TCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGCCACTGCCATCAAAATaGGGGGAAATAAATGTTAAT +
Preference number: 2 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMPLPSK*GEINVN
Trigger: ATTAACATTTATTTCCCCTCATTTTGATGGCAGTGG...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
3UTR-3UTR GCA 90 bp GAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAAATGGTGTTCATCCCATaGAATTCTGAAGTACTGTTA +
Preference number: 2 (lower is better)
Translates to: EHYQFPRPVNKLVLVICQMVFIP*NSEVLL
Trigger: TAACAGTACTTCAGAATTGCATGGGATGAACACCAT...TTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR CCA 90 bp GAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATACAACTTGTATAAATaGGCACAGTCTATCATGGTG +
Preference number: 2 (lower is better)
Translates to: EHYQFPRPVNKLVLVICQYNLYK*AQSIMV
Trigger: CACCATGATAGACTGTGCCCATTTATACAAGTTGTA...TTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR CAA 90 bp ACAACTGAAACCTTAAGGGAAATCAGACCAATATATACATACAACTaGTATAAATGGGCACAGTCTATCATGGTGTTCATCCCATGCAAT +
Preference number: 2 (lower is better)
Translates to: TTETLREIRPIYTYN*YKWAQSIMVFIPCN
Trigger: ATTGCATGGGATGAACACCATGATAGACTGTGCCCATTTATACAAGTTGTATGTATATATTGGTCTGATTTCCCTTAAGGTTTCAGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR GCA 72 bp AGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTaGATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCC +
Preference number: 3 (lower is better)
Translates to: SFSEGFLLMPML*MMKCRVSLLES
Trigger: GGACTCCAGCAGGCTGACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR CAA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTTTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCC +
Preference number: 3 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVFSQNG*SLATLS
Trigger: GGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAA...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR GCA 72 bp GGAACCATTCGGCACTCTTATCTGATAGTGATTCAGTaGCGTAAGGGCTTCTACTGCATCAGTTTTGCACTC +
Preference number: 3 (lower is better)
Translates to: GTIRHSYLIVIQ*RKGFYCISFAL
Trigger: GAGTGCAAAACTGATGCAGTAGAAGCCCTTACGGCACTGAATCACTATCAGATAAGAGTGCCGAATGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR-3UTR CAA 90 bp TGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAAAGTCCTTAAGCAGTGTGCAAGTTaGCAGTTTGTAAGGAATATT +
Preference number: 3 (lower is better)
Translates to: CWSPLSFLMPRPAWGKVLKQCAS*QFVRNI
Trigger: AATATTCCTTACAAACTGCAAACTTGCACACTGCTT...AAGGACTTTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR TCA 72 bp TTGGAGAAATGCAAGTCCTTGAACTGCGGGCGTGCCTaGATGTGTGGGCTCCTTGTTGAACTAAATATAAAT +
Preference number: 3 (lower is better)
Translates to: LEKCKSLNCGRA*MCGLLVELNIN
Trigger: ATTTATATTTAGTTCAACAAGGAGCCCACACATTCAGGCACGCCCGCAGTTCAAGGACTTGCATTTCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR CAA 90 bp GCTCTTTCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGTATAAGCAGAACAGGTaGAAGACTCTTGAACAATTC +
Preference number: 3 (lower is better)
Translates to: ALSTAYSSPISTSAVPGMYKQNR*KTLEQF
Trigger: GAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTATA...CATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGAAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR-3UTR CAA 90 bp CAATGTATAGGGATTGGAACCATTCGGCACTCTTATCTGATAGTGATTCAGTGCTCTACTGCATCAGTTTaGCACTCCCATTCTAATAGC +
Preference number: 3 (lower is better)
Translates to: QCIGIGTIRHSYLIVIQCSTASV*HSHSNS
Trigger: GCTATTAGAATGGGAGTGCAAAACTGATGCAGTAGA...GCACTGAATCACTATCAGATAAGAGTGCCGAATGGTTCCAATCCCTATACATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR-3UTR CAA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTAACAATTCACTTATTTaGGTGGAGAGAGAGCCTTAC +
Preference number: 3 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLNNSLI*VEREPY
Trigger: GTAAGGCTCTCTCTCCACCAAAATAAGTGAATTGTT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
3UTR-3UTR CAA 90 bp TTGAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCTTTTCAGAGGGCTTTTaGCTGATGCCGATGTTGTGC +
Preference number: 3 (lower is better)
Translates to: LSIINSQDLLINWSWLFAFSEGF*LMPMLC
Trigger: GCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAA...GGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR CAA 90 bp AGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATAAGAGAGAGAGCTGCTaGGAGAAATGCAAGTCCTTG +
Preference number: 3 (lower is better)
Translates to: SIINSQDLLINWSWLFANKRESC*EKCKSL
Trigger: CAAGGACTTGCATTTCTCCAAGCAGCTCTCTCTCTT...ATTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR-3UTR CAA 90 bp AGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATTTGCTGATGCCGATGTaGTGCATGATGAAGTGTAGA +
Preference number: 3 (lower is better)
Translates to: SIINSQDLLINWSWLFANLLMPM*CMMKCR
Trigger: TCTACACTTCATCATGCACAACATCGGCATCAGCAA...ATTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR TCA 72 bp ATTCTACATACAATTTTAGGGGGTACACAGATTCTCTaGAGCCCACCCATGGATCCCAGATTATTATCTATA +
Preference number: 3 (lower is better)
Translates to: ILHTILGGTQIL*SPPMDPRLLSI
Trigger: TATAGATAATAATCTGGGATCCATGGGTGGGCTTCAGAGAATCTGTGTACCCCCTAAAATTGTATGTAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
3UTR GCA 72 bp TCTTTCTACAGCATACTCATCACCCATTTCTACCAGTaGTGTACCAGGAATGGTCTTCATAAATTTTACCTT +
Preference number: 3 (lower is better)
Translates to: SFYSILITHFYQ*CTRNGLHKFYL
Trigger: AAGGTAAAATTTATGAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR TCA 72 bp ACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTaGATGTTGTTTAGACACGCAAACATTAAGTCTTTT +
Preference number: 3 (lower is better)
Translates to: TILQLKYLTWNN*MLFRHANIKSF
Trigger: AAAAGACTTAATGTTTGCGTGTCTAAACAACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR CCA 72 bp GAAATCAGACCAATATATACATACAACTTGTATAAATaGGCACAGTCTATCATGGTGTTCATCCCATGCAAT +
Preference number: 3 (lower is better)
Translates to: EIRPIYTYNLYK*AQSIMVFIPCN
Trigger: ATTGCATGGGATGAACACCATGATAGACTGTGCCCATTTATACAAGTTGTATGTATATATTGGTCTGATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTGCGCGGCCAGGAGACTaGCGGCTGAGAAGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLARPGD*RLRSAD
Trigger: GTCCGCGCTTCTCAGCCGCCAGTCTCCTGGCCGCGC...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449105.8
CDS-3UTR GCA 90 bp GTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAACGCTTCCACGAGGTCTaGTTCCACCACAGATTCACA +
Preference number: 4 (lower is better)
Translates to: VSLLESSILLNASSSLGERFHEV*FHHRFT
Trigger: TGTGAATCTGTGGTGGAAGCAGACCTCGTGGAAGCG...TTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGCGGCAGCGCCTCTTCTaGGAGGGTCTCCGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMRQRLF*EGLRGP
Trigger: CGGGCCGCGGAGACCCTCGCAGAAGAGGCGCTGCCG...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449105.8
CDS-3UTR CCA 90 bp GTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAACAGAGTCCTCGAACATaGACGACGGGTGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: VSLLESSILLNASSSLGEQSPRT*TTGETE
Trigger: TTCTGTTTCACCCGTCGTCCATGTTCGAGGACTCTG...TTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
3UTR CAA 72 bp GAATCAGTTTCCTCTCCTCCAAAGAGAGAGAGCTGCTaGGAGAAATGCAAGTCCTTGAACTGCGGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: ESVSSPPKRESC*EKCKSLNCGRA
Trigger: GGCACGCCCGCAGTTCAAGGACTTGCATTTCTCCAAGCAGCTCTCTCTCTTTGGAGGAGAGGAAACTGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCCCCCTCCTCGGTCTTaGGACGCTTGGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTPPPRS*DAWPGS
Trigger: AGAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp GTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAAGGTGAATTGCGAGTCTaGGTTTTTCAGAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSLLESSILLNASSSLGEGELRV*VFQRAF
Trigger: AAAAGCCCTCTGAAAAACTCAGACTCGCAATTCACC...TTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCGGCAGCGCCTCTTCTaGGAGGGTCTCCGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISRQRLF*EGLRGP
Trigger: CGGGCCGCGGAGACCCTCGCAGAAGAGGCGCTGCCG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTTTGAGACGCTTGGCCTaGCTCTCGTACTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLLRRLA*LSYSRS
Trigger: GGACCGGGAGTACGAGAGCCAGGCCAAGCGTCTCAA...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGAAGAGGAGGAGGACATaGCGGCGGCCGGAGGGACCG +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMKRRRT*RRPEGP
Trigger: CGGTCCCTCCGGCCGCCGCCATGTCCTCCTCCTCTT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449105.8
CDS-3UTR CCA 90 bp TGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAAAGTCCTTATGCCTCGTCCAGCTTaGGGGAAAGTCCTTTCCATA +
Preference number: 4 (lower is better)
Translates to: CWSPLSFLMPRPAWGKVLMPRPA*GKVLSI
Trigger: TATGGAAAGGACTTTCCCCCAAGCTGGACGAGGCAT...AAGGACTTTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGCCCCCTCCTCGGTCTTaGGACGCTTGGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMPPPRS*DAWPGS
Trigger: AGAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGG...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp TGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAAAGTCCTTAGCTCCATTGAGTGCTaGTTTAGCTTTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: CWSPLSFLMPRPAWGKVLSSIEC*FSFLGT
Trigger: TGTGCCCAGAAAGCTAAAGCAGCACTCAATGGAGCT...AAGGACTTTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp TTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTAGAGTCCTTGAACTGCGGGCGTaGCTGAATGTGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FSEGFLLMPMLCMMKCRVLELRA*LNVWAP
Trigger: AGGAGCCCACACATTCAGGCACGCCCGCAGTTCAAG...GACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp ATGCCGATGTTGTGCATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCAGTGTAGAGTCAGCCTaGTGGAGTCCTCTATCCTTC +
Preference number: 4 (lower is better)
Translates to: MPMLCMMKCRVSLLESSISVESA*WSPLSF
Trigger: GAAGGATAGAGGACTCCAGCAGGCTGACTCTACACT...GATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCATGCACAACATCGGCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGCCCGGGAGGAAGCTCTaGAGCGGCCGCTCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMPGRKL*SGRSSQ
Trigger: TTGAGAGGAGCGGCCGCTCCAGAGCTTCCTCCCGGG...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449105.8
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTGCGCGGCCAGGAGACTaGCGGCTGAGAAGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISARPGD*RLRSAD
Trigger: GTCCGCGCTTCTCAGCCGCCAGTCTCCTGGCCGCGC...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp AGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATCCCCCTCCTCGGTCTTaGGACGCTTGGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SIINSQDLLINWSWLFANPPPRS*DAWPGS
Trigger: AGAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGG...ATTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp TCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGGTCTTCCGCTTCCACGAGGTCTaGTTCCACCACAGATTCACA +
Preference number: 4 (lower is better)
Translates to: STAYSSPISTSAVPGMVFRFHEV*FHHRFT
Trigger: TGTGAATCTGTGGTGGAAGCAGACCTCGTGGAAGCG...GAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTATGGGGACGCAACCGTaGCTTCCGGTCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTMGTQP*LPVFPP
Trigger: AGGAGGGAAGACCGGAAGCCACGGTTGCGTCCCCAT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358367.8
ENST00000409636.5
ENST00000608859.5
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTTGAGACGCTTGGCCTaGCTCTCGTACTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTLRRLA*LSYSRS
Trigger: GGACCGGGAGTACGAGAGCCAGGCCAAGCGTCTCAA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAAGAGGAGGAGGACATaGCGGCGGCCGGAGGGACCG +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISKRRRT*RRPEGP
Trigger: CGGTCCCTCCGGCCGCCGCCATGTCCTCCTCCTCTT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449105.8
ENST00000608859.5
3UTR CAA 72 bp CTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTaGTGCATGATGAAGTGTAGAGTCAGCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSFSEGFLLMPM*CMMKCRVSLLE
Trigger: CTCCAGCAGGCTGACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp TGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAAAGTCCTTAACTTTGTTGCCTCCTaGTGGATCATCAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: CWSPLSFLMPRPAWGKVLNFVAS*WIISIS
Trigger: GGAAATACTGATGATCCATCAGGAGGCAACAAAGTT...AAGGACTTTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCCCCCTCCTCGGTCTTaGGACGCTTGGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISPPPRS*DAWPGS
Trigger: AGAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp TGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAAAGTCCTTCATCCCATGCAATTCTaGAGTACTGTTAAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CWSPLSFLMPRPAWGKVLHPMQF*STVKCP
Trigger: AGGACACTTAACAGTACTTCAGAATTGCATGGGATG...AAGGACTTTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp GAAGAAGGGTGTTCTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTGCAGAAGAACTTTGTTaGCTCCTGATGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: EEGCSPKMACLWRPFPLSAEELC*LLMDHQ
Trigger: CTGATGATCCATCAGGAGGCAACAAAGTTCTTCTGC...AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAACACCCTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp ATGCCGATGTTGTGCATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTGATGCCGATGTTGTaGATGATGAAGTGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: MPMLCMMKCRVSLLESSILMPML*MMKCRV
Trigger: GACTCTACACTTCATCATGCACAACATCGGCATCAG...GATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCATGCACAACATCGGCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp GCTCTTTCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGCAGAGTCCTCGAACATaGACGACGGGTGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: ALSTAYSSPISTSAVPGMQSPRT*TTGETE
Trigger: TTCTGTTTCACCCGTCGTCCATGTTCGAGGACTCTG...CATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGAAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGATGGGGACGCAACCGTaGCTTCCGGTCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMMGTQP*LPVFPP
Trigger: AGGAGGGAAGACCGGAAGCCACGGTTGCGTCCCCAT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409636.5
CDS-3UTR CCA 90 bp ATACATACAACTTGTATAAATGGGCACAGTCTATCATGGTGTTCATCCCATGCATTGAGACGCTTGGCCTaGCTCTCGTACTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: IHTTCINGHSLSWCSSHALRRLA*LSYSRS
Trigger: GGACCGGGAGTACGAGAGCCAGGCCAAGCGTCTCAA...TGCATGGGATGAACACCATGATAGACTGTGCCCATTTATACAAGTTGTATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCCCGGGAGGAAGCTCTaGAGCGGCCGCTCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISPGRKL*SGRSSQ
Trigger: TTGAGAGGAGCGGCCGCTCCAGAGCTTCCTCCCGGG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp ATGCCGATGTTGTGCATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCCTCCTTTAAAAACTTaGGGTGATGGTGCATGCAGT +
Preference number: 4 (lower is better)
Translates to: MPMLCMMKCRVSLLESSIPPLKT*GDGACS
Trigger: ACTGCATGCACCATCACCCCAAGTTTTTAAAGGAGG...GATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCATGCACAACATCGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp GTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAATACAACTTGTATAAATaGGCACAGTCTATCATGGTG +
Preference number: 4 (lower is better)
Translates to: VSLLESSILLNASSSLGEYNLYK*AQSIMV
Trigger: CACCATGATAGACTGTGCCCATTTATACAAGTTGTA...TTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp ATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGCAATACGTTGCACTTTaGCAACAGGGTTGCATACAG +
Preference number: 4 (lower is better)
Translates to: MMKCRVSLLESSILLNASQYVAL*QQGCIQ
Trigger: CTGTATGCAACCCTGTTGGCAAAGTGCAACGTATTG...CGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp GTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGTCCAGCTTGGGGGAATTCAAACTCAACCATTaGTTGTATCCCATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VSLLESSILLNASSSLGEFKLNH*LYPISL
Trigger: AAGAGAAATGGGATACAAGCAATGGTTGAGTTTGAA...TTCCCCCAAGCTGGACGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp GCTCTTTCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGCTGATAGTGATTCAGTaGCGTAAGGGCTTCTACTGC +
Preference number: 4 (lower is better)
Translates to: ALSTAYSSPISTSAVPGMLIVIQ*RKGFYC
Trigger: GCAGTAGAAGCCCTTACGGCACTGAATCACTATCAG...CATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGAAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
3UTR CAA 72 bp GTTCAGGTGTATCTCGAGAGCCCATTCTGTAACGACTaGGTAAAGGCAATAATGGACCATGGGATCCATAGC +
Preference number: 4 (lower is better)
Translates to: VQVYLESPFCND*VKAIMDHGIHS
Trigger: GCTATGGATCCCATGGTCCATTATTGCCTTTACCAAGTCGTTACAGAATGGGCTCTCGAGATACACCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp GAAGAAGGGTGTTCTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTAAGCGGATTCTGAATTaGGAGCAGAAGAACTTTGTT +
Preference number: 4 (lower is better)
Translates to: EEGCSPKMACLWRPFPLSKRILN*EQKNFV
Trigger: AACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTT...AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAACACCCTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTCTGGGCACAAAGGACTaGTTCAAACTCAACCATTGC +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLLGTKD*FKLNHC
Trigger: GCAATGGTTGAGTTTGAATCAGTCCTTTGTGCCCAG...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp ATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGAGTATGCAGTCAAGGTaGATTGCGAGTCTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: MMKCRVSLLESSILLNASSMQSR*IASLSF
Trigger: AAAACTCAGACTCGCAATTCACCTTGACTGCATACT...CGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCGCTTCCACGAGGTCTaGTTCCACCACAGATTCACA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTRFHEV*FHHRFT
Trigger: TGTGAATCTGTGGTGGAAGCAGACCTCGTGGAAGCG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp TCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGGTCTTCCAATACGTTGCACTTTaGCAACAGGGTTGCATACAG +
Preference number: 4 (lower is better)
Translates to: STAYSSPISTSAVPGMVFQYVAL*QQGCIQ
Trigger: CTGTATGCAACCCTGTTGGCAAAGTGCAACGTATTG...GAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp CTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTGAATCATACTATTATCAGCTCCATTGAGTaGTGCTTTAGCTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPKWLVSGDPFLYLNHTIISSIE*CFSFLG
Trigger: GCCCAGAAAGCTAAAGCAGCACTCAATGGAGCTGAT...AATAGTATGATTCAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTATCAGCTCCATTGAGTaGTGCTTTAGCTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLISSIE*CFSFLG
Trigger: GCCCAGAAAGCTAAAGCAGCACTCAATGGAGCTGAT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp GCTCTTTCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGACCCATTTCTACCAGTaGTGTACCAGGAATGGTCTT +
Preference number: 4 (lower is better)
Translates to: ALSTAYSSPISTSAVPGMTHFYQ*CTRNGL
Trigger: AAGACCATTCCTGGTACAGCACTGGTAGAAATGGGT...CATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGAAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTCGTAAGGGCTTCTACTaGATCAGTTTTGCACTCCCA +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLRKGFY*ISFALP
Trigger: TGGGAGTGCAAAACTGATGCAGTAGAAGCCCTTACG...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTTGAGACGCTTGGCCTaGCTCTCGTACTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISLRRLA*LSYSRS
Trigger: GGACCGGGAGTACGAGAGCCAGGCCAAGCGTCTCAA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTGTAGAGTCAGCCTGCTaGAGTCCTCTATCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LSFSEGFLLMPMLCMMKCVESAC*SPLSFL
Trigger: TAAGAAGGATAGAGGACTCCAGCAGGCTGACTCTAC...ACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp GTGAATTGCGAGTCTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGAACATGGACGACGGGTaGAACAGAAACTTTATGATG +
Preference number: 4 (lower is better)
Translates to: VNCESEFFRGLFADADVVNMDDG*NRNFMM
Trigger: CATCATAAAGTTTCTGTTTCACCCGTCGTCCATGTT...CACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAGACTCGCAATTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp ATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGAAGCGGATTCTGAATTaGGAGCAGAAGAACTTTGTT +
Preference number: 4 (lower is better)
Translates to: MMKCRVSLLESSILLNASKRILN*EQKNFV
Trigger: AACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTT...CGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp CTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTGAATCATACTATTACTAACCATTACAACTaGACCAGAGGGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPKWLVSGDPFLYLNHTITNHYN*TRGISS
Trigger: GGAGGAAATCCCTCTGGTTCAGTTGTAATGGTTAGT...AATAGTATGATTCAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp ATACATACAACTTGTATAAATGGGCACAGTCTATCATGGTGTTCATCCCATGCAAGAAATGCAAGTCCTTaGACTGCGGGCGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: IHTTCINGHSLSWCSSHARNASP*TAGVPE
Trigger: TTCAGGCACGCCCGCAGTTCAAGGACTTGCATTTCT...TGCATGGGATGAACACCATGATAGACTGTGCCCATTTATACAAGTTGTATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGCGCTTCCACGAGGTCTaGTTCCACCACAGATTCACA +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMRFHEV*FHHRFT
Trigger: TGTGAATCTGTGGTGGAAGCAGACCTCGTGGAAGCG...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp CTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTGTACACGGGTTCATCTaGAGCAAATGTCACACATTC +
Preference number: 4 (lower is better)
Translates to: LSFSEGFLLMPMLCMMKCVHGFI*SKCHTF
Trigger: GAATGTGTGACATTTGCTGCAGATGAACCCGTGTAC...ACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp CTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTGCAGAAGAACTTTGTTaGCTCCTGATGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: LSFSEGFLLMPMLCMMKCAEELC*LLMDHQ
Trigger: CTGATGATCCATCAGGAGGCAACAAAGTTCTTCTGC...ACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp CTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTGAATCATACTATTCAAAATCTTTGTAGCTaGTGGTACCATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LPKWLVSGDPFLYLNHTIQNLCS*WYHPPA
Trigger: AGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTG...AATAGTATGATTCAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTCAAAATCTTTGTAGCTaGTGGTACCATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLQNLCS*WYHPPA
Trigger: AGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTG...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp GCTCTTTCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGCTACTGCATCAGTTTTaGACTCCCATTCTAATAGCC +
Preference number: 4 (lower is better)
Translates to: ALSTAYSSPISTSAVPGMLLHQF*TPILIA
Trigger: GGCTATTAGAATGGGAGTGCAAAACTGATGCAGTAG...CATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCAGAGTCCTCGAACATaGACGACGGGTGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTQSPRT*TTGETE
Trigger: TTCTGTTTCACCCGTCGTCCATGTTCGAGGACTCTG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp TTGCAAAATCTTTGTAGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGCTGGGCACAAAGGACTaGTTCAAACTCAACCATTGC +
Preference number: 4 (lower is better)
Translates to: LQNLCSCWYHPPAQIFDLLGTKD*FKLNHC
Trigger: GCAATGGTTGAGTTTGAATCAGTCCTTTGTGCCCAG...CAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp TTGCAAAATCTTTGTAGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGAGCTCCATTGAGTGCTaGTTTAGCTTTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: LQNLCSCWYHPPAQIFDLSSIEC*FSFLGT
Trigger: TGTGCCCAGAAAGCTAAAGCAGCACTCAATGGAGCT...CAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAGCTCCATTGAGTGCTaGTTTAGCTTTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTSSIEC*FSFLGT
Trigger: TGTGCCCAGAAAGCTAAAGCAGCACTCAATGGAGCT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTATCAGCTCCATTGAGTaGTGCTTTAGCTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTISSIE*CFSFLG
Trigger: GCCCAGAAAGCTAAAGCAGCACTCAATGGAGCTGAT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTCTACTGCATCAGTTTTaGACTCCCATTCTAATAGCC +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLLLHQF*TPILIA
Trigger: GGCTATTAGAATGGGAGTGCAAAACTGATGCAGTAG...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCGTAAGGGCTTCTACTaGATCAGTTTTGCACTCCCA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTRKGFY*ISFALP
Trigger: TGGGAGTGCAAAACTGATGCAGTAGAAGCCCTTACG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCTGATAGTGATTCAGTaGCGTAAGGGCTTCTACTGC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTLIVIQ*RKGFYC
Trigger: GCAGTAGAAGCCCTTACGGCACTGAATCACTATCAG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp GTGAATTGCGAGTCTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATAGAGAAGCAGTGTaGAAGTTTGCAGTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: VNCESEFFRGLFADADVVHREAV*KFAVCK
Trigger: CTTACAAACTGCAAACTTGCACACTGCTTCTCTATG...CACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAGACTCGCAATTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp TTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTAGAGTCGCAGTCAAGGTGAATTaGGAGTCTGAGTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: FSEGFLLMPMLCMMKCRVAVKVN*ESEFFR
Trigger: TCTGAAAAACTCAGACTCGCAATTCACCTTGACTGC...GACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTAAAATGGCTTGTCTCTaGCGACCCTTTCCTCTATCT +
Preference number: 4 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVKMACL*RPFPLS
Trigger: AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTT...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTGCCCAGAAAGTGTTTTaGCTGAAGGTTTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLAQKVF*LKVLHQ
Trigger: TTGATGCAAAACCTTCAGCCAAAACACTTTCTGGGC...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTAACTTTGTTGCCTCCTaGTGGATCATCAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVNFVAS*WIISIS
Trigger: GGAAATACTGATGATCCATCAGGAGGCAACAAAGTT...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp GAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAACTGGGCACAAAGGACTaGTTCAAACTCAACCATTGC +
Preference number: 4 (lower is better)
Translates to: EHYQFPRPVNKLVLVICQLGTKD*FKLNHC
Trigger: GCAATGGTTGAGTTTGAATCAGTCCTTTGTGCCCAG...TTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTACTAACCATTACAACTaGACCAGAGGGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTTNHYN*TRGISS
Trigger: GGAGGAAATCCCTCTGGTTCAGTTGTAATGGTTAGT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTAGAAAGTGTTTTGGCTaGAGGTTTTGCATCAAACAC +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLRKCFG*RFCIKH
Trigger: GTGTTTGATGCAAAACCTTCAGCCAAAACACTTTCT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCTGGGCACAAAGGACTaGTTCAAACATAAGCATTGC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTLGTKD*FKHKHC
Trigger: GCAATGCTTATGTTTGAATCAGTCCTTTGTGCCCAG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358367.8
ENST00000608859.5
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCGCTTCCACGAGGTCTaGTTCCACCACAGATTCACA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISRFHEV*FHHRFT
Trigger: TGTGAATCTGTGGTGGAAGCAGACCTCGTGGAAGCG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp TTGCAAAATCTTTGTAGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGTACACGGGTTCATCTaGAGCAAATGTCACACATTC +
Preference number: 4 (lower is better)
Translates to: LQNLCSCWYHPPAQIFDLVHGFI*SKCHTF
Trigger: GAATGTGTGACATTTGCTGCAGATGAACCCGTGTAC...CAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTGTACACGGGTTCATCTaGAGCAAATGTCACACATTC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTVHGFI*SKCHTF
Trigger: GAATGTGTGACATTTGCTGCAGATGAACCCGTGTAC...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTGCAGAAGAACTTTGTTaGCTCCTGATGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTAEELC*LLMDHQ
Trigger: CTGATGATCCATCAGGAGGCAACAAAGTTCTTCTGC...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCAATACGTTGCACTTTaGCAACAGGGTTGCATACAG +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTQYVAL*QQGCIQ
Trigger: CTGTATGCAACCCTGTTGGCAAAGTGCAACGTATTG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp TCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGGTCTTCAATATAACAATACGTTaGACTTTGCCAACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: STAYSSPISTSAVPGMVFNITIR*TLPTGL
Trigger: CAACCCTGTTGGCAAAGTGCAACGTATTGTTATATT...GAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGAGCTCCATTGAGTGCTaGTTTAGCTTTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMSSIEC*FSFLGT
Trigger: TGTGCCCAGAAAGCTAAAGCAGCACTCAATGGAGCT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp GAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAAATCAGCTCCATTGAGTaGTGCTTTAGCTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EHYQFPRPVNKLVLVICQISSIE*CFSFLG
Trigger: GCCCAGAAAGCTAAAGCAGCACTCAATGGAGCTGAT...TTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTACCCATTTCTACCAGTaGTGTACCAGGAATGGTCTT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTTHFYQ*CTRNGL
Trigger: AAGACCATTCCTGGTACAGCACTGGTAGAAATGGGT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTGCTGCTTTAGCTTTCTaGGCACAAAGGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTAALAF*AQRTDS
Trigger: TGAATCAGTCCTTTGTGCCCAGAAAGCTAAAGCAGC...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAAAATGGCTTGTCTCTaGCGACCCTTTCCTCTATCT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTKMACL*RPFPLS
Trigger: AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTGGTGTTCTCCCAAAATaGCTTGTCTCTGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISGVLPK*LVSGDP
Trigger: AGGGTCGCCAGAGACAAGCCATTTTGGGAGAACACC...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAATCTTTGTAGCTGCTaGTACCATCCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTNLCSC*YHPPAQ
Trigger: TTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTATATTCTTAGATGCTTaGCCAGCACTTGTAAAGCGA +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLIFLDA*PALVKR
Trigger: TCGCTTTACAAGTGCTGGCCAAGCATCTAAGAATAT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTTCAATGTATAGGGATTaGAACCATTCGGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLSMYRD*NHSALL
Trigger: TAAGAGTGCCGAATGGTTCCAATCCCTATACATTGA...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp TTGCAAAATCTTTGTAGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGAACATGGACGACGGGTaGAACAGAAACTTTATGATG +
Preference number: 4 (lower is better)
Translates to: LQNLCSCWYHPPAQIFDLNMDDG*NRNFMM
Trigger: CATCATAAAGTTTCTGTTTCACCCGTCGTCCATGTT...CAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAACATGGACGACGGGTaGAACAGAAACTTTATGATG +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTNMDDG*NRNFMM
Trigger: CATCATAAAGTTTCTGTTTCACCCGTCGTCCATGTT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAACTTTGTTGCCTCCTaGTGGATCATCAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTNFVAS*WIISIS
Trigger: GGAAATACTGATGATCCATCAGGAGGCAACAAAGTT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGACTAACCATTACAACTaGACCAGAGGGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMTNHYN*TRGISS
Trigger: GGAGGAAATCCCTCTGGTTCAGTTGTAATGGTTAGT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp CTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTGAATCATACTATTATAAGCAGAACAGGTTaGAGACTCTTGAACAATTCA +
Preference number: 4 (lower is better)
Translates to: LPKWLVSGDPFLYLNHTIISRTG*RLLNNS
Trigger: TGAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTAT...AATAGTATGATTCAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTATAAGCAGAACAGGTTaGAGACTCTTGAACAATTCA +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLISRTG*RLLNNS
Trigger: TGAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTAT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTAGAAAGTGTTTTGGCTaGAGGTTTTGCATCAAACAC +
Preference number: 4 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVRKCFG*RFCIKH
Trigger: GTGTTTGATGCAAAACCTTCAGCCAAAACACTTTCT...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp CTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTTTACAACATTGCAGATaGAGTCTAGTTTCCGTTAGT +
Preference number: 4 (lower is better)
Translates to: LSFSEGFLLMPMLCMMKCLQHCR*SLVSVS
Trigger: ACTAACGGAAACTAGACTTCATCTGCAATGTTGTAA...ACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTCCACTGCCATCAAAATaGGGGGAAATAAATGTTAAT +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLPLPSK*GEINVN
Trigger: ATTAACATTTATTTCCCCTCATTTTGATGGCAGTGG...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGGTACACGGGTTCATCTaGAGCAAATGTCACACATTC +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMVHGFI*SKCHTF
Trigger: GAATGTGTGACATTTGCTGCAGATGAACCCGTGTAC...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGCAATACGTTGCACTTTaGCAACAGGGTTGCATACAG +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMQYVAL*QQGCIQ
Trigger: CTGTATGCAACCCTGTTGGCAAAGTGCAACGTATTG...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp CTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTAATATAACAATACGTTaGACTTTGCCAACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LSFSEGFLLMPMLCMMKCNITIR*TLPTGL
Trigger: CAACCCTGTTGGCAAAGTGCAACGTATTGTTATATT...ACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTAATATAACAATACGTTaGACTTTGCCAACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLNITIR*TLPTGL
Trigger: CAACCCTGTTGGCAAAGTGCAACGTATTGTTATATT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGACCCATTTCTACCAGTaGTGTACCAGGAATGGTCTT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMTHFYQ*CTRNGL
Trigger: AAGACCATTCCTGGTACAGCACTGGTAGAAATGGGT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGCAAAATCTTTGTAGCTaGTGGTACCATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMQNLCS*WYHPPA
Trigger: AGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTG...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCTACTGCATCAGTTTTaGACTCCCATTCTAATAGCC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTLLHQF*TPILIA
Trigger: GGCTATTAGAATGGGAGTGCAAAACTGATGCAGTAG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp ATGTTGTGCATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTTCTTCATTACATGGCCTTTTaGAACAAAAGCATTCATCAA +
Preference number: 4 (lower is better)
Translates to: MLCMMKCRVSLLESSILLHYMAF*NKSIHQ
Trigger: TTGATGAATGCTTTTGTTGCAAAAGGCCATGTAATG...AAGAAGGATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCATGCACAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp ATACATACAACTTGTATAAATGGGCACAGTCTATCATGGTGTTCATCCCATGCAATGGTGCATGCAGTATaGAGTCAAGGTGAATTGCGA +
Preference number: 4 (lower is better)
Translates to: IHTTCINGHSLSWCSSHAMVHAV*SQGELR
Trigger: TCGCAATTCACCTTGACTGCATACTGCATGCACCAT...TGCATGGGATGAACACCATGATAGACTGTGCCCATTTATACAAGTTGTATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCAGAGTCCTCGAACATaGACGACGGGTGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISQSPRT*TTGETE
Trigger: TTCTGTTTCACCCGTCGTCCATGTTCGAGGACTCTG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTATCATCAGTATTTCCTaGCCGAGTGATCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTIISIS*PSDPFA
Trigger: AGCAAAAGGATCACTCGGCCAGGAAATACTGATGAT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp GCTCTTTCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGAACATCCACTGTAATTaGATAAAGCGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ALSTAYSSPISTSAVPGMNIHCN*IKRILN
Trigger: ATTCAGAATCCGCTTTATCCAATTACAGTGGATGTT...CATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGAAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CCA 90 bp GAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAAGCTGCTTTAGCTTTCTaGGCACAAAGGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: EHYQFPRPVNKLVLVICQAALAF*AQRTDS
Trigger: TGAATCAGTCCTTTGTGCCCAGAAAGCTAAAGCAGC...TTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGAAAATGGCTTGTCTCTaGCGACCCTTTCCTCTATCT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMKMACL*RPFPLS
Trigger: AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGAATCTTTGTAGCTGCTaGTACCATCCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMNLCSC*YHPPAQ
Trigger: TTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp TTGCAAAATCTTTGTAGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGCCCAGAAAGTGTTTTaGCTGAAGGTTTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: LQNLCSCWYHPPAQIFDLAQKVF*LKVLHQ
Trigger: TTGATGCAAAACCTTCAGCCAAAACACTTTCTGGGC...CAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CCA 90 bp CAATGTATAGGGATTGGAACCATTCGGCACTCTTATCTGATAGTGATTCAGTGCTCAATGTATAGGGATTaGAACCATTCGGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: QCIGIGTIRHSYLIVIQCSMYRD*NHSALL
Trigger: TAAGAGTGCCGAATGGTTCCAATCCCTATACATTGA...GCACTGAATCACTATCAGATAAGAGTGCCGAATGGTTCCAATCCCTATACATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTCTGAAGCCCACCCATaGATCCCAGATTATTATCTA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTSEAHP*IPDYYL
Trigger: TAGATAATAATCTGGGATCCATGGGTGGGCTTCAGA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp TTGAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCGGGCACAGTCTATCATaGTGTTCATCCCATGCAATT +
Preference number: 4 (lower is better)
Translates to: LSIINSQDLLINWSWLFAGHSLS*CSSHAI
Trigger: AATTGCATGGGATGAACACCATGATAGACTGTGCCC...GGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGAACATGGACGACGGGTaGAACAGAAACTTTATGATG +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMNMDDG*NRNFMM
Trigger: CATCATAAAGTTTCTGTTTCACCCGTCGTCCATGTT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAAGCGGATTCTGAATTaGGAGCAGAAGAACTTTGTT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTKRILN*EQKNFV
Trigger: AACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCTGGGCACAAAGGACTaGTTCAAACTCAACCATTGC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISLGTKD*FKLNHC
Trigger: GCAATGGTTGAGTTTGAATCAGTCCTTTGTGCCCAG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272249.7
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp CAATGTATAGGGATTGGAACCATTCGGCACTCTTATCTGATAGTGATTCAGTGCTCCAGCTCAAATATTTaGCTTGGAACAACTGAATGT +
Preference number: 4 (lower is better)
Translates to: QCIGIGTIRHSYLIVIQCSSSNI*LGTTEC
Trigger: ACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGA...GCACTGAATCACTATCAGATAAGAGTGCCGAATGGTTCCAATCCCTATACATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAGAAAGTGTTTTGGCTaGAGGTTTTGCATCAAACAC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTRKCFG*RFCIKH
Trigger: GTGTTTGATGCAAAACCTTCAGCCAAAACACTTTCT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTCTTTGCCAACAGGGTTaGATACAGTATATAAAACAT +
Preference number: 4 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLLCQQG*IQYIKH
Trigger: ATGTTTTATATACTGTATGCAACCCTGTTGGCAAAG...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAGCTCCATTGAGTGCTaGTTTAGCTTTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISSSIEC*FSFLGT
Trigger: TGTGCCCAGAAAGCTAAAGCAGCACTCAATGGAGCT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGCTACTGCATCAGTTTTaGACTCCCATTCTAATAGCC +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMLLHQF*TPILIA
Trigger: GGCTATTAGAATGGGAGTGCAAAACTGATGCAGTAG...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCGTAAGGGCTTCTACTaGATCAGTTTTGCACTCCCA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISRKGFY*ISFALP
Trigger: TGGGAGTGCAAAACTGATGCAGTAGAAGCCCTTACG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCTGATAGTGATTCAGTaGCGTAAGGGCTTCTACTGC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISLIVIQ*RKGFYC
Trigger: GCAGTAGAAGCCCTTACGGCACTGAATCACTATCAG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp TTGCAAAATCTTTGTAGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGAGCCTGTCGTTTAAATaGCATCATCATCACATAGCA +
Preference number: 4 (lower is better)
Translates to: LQNLCSCWYHPPAQIFDLSLSFK*HHHHIA
Trigger: TGCTATGTGATGATGATGCCATTTAAACGACAGGCT...CAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGATCATCAGTATTTCCTaGCCGAGTGATCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMIISIS*PSDPFA
Trigger: AGCAAAAGGATCACTCGGCCAGGAAATACTGATGAT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp ATACATACAACTTGTATAAATGGGCACAGTCTATCATGGTGTTCATCCCATGCAATCATCAGTATTTCCTaGCCGAGTGATCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: IHTTCINGHSLSWCSSHAIISIS*PSDPFA
Trigger: AGCAAAAGGATCACTCGGCCAGGAAATACTGATGAT...TGCATGGGATGAACACCATGATAGACTGTGCCCATTTATACAAGTTGTATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTATATTCTTAGATGCTTaGCCAGCACTTGTAAAGCGA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTIFLDA*PALVKR
Trigger: TCGCTTTACAAGTGCTGGCCAAGCATCTAAGAATAT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGGCCCAGAAAGTGTTTTaGCTGAAGGTTTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMAQKVF*LKVLHQ
Trigger: TTGATGCAAAACCTTCAGCCAAAACACTTTCTGGGC...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTCAATGTATAGGGATTaGAACCATTCGGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTSMYRD*NHSALL
Trigger: TAAGAGTGCCGAATGGTTCCAATCCCTATACATTGA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTATAAAATCTCCAAACTaGACTAGAAACAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVIKSPN*TRNRGM
Trigger: CATGCCTCTGTTTCTAGTCCAGTTTGGAGATTTTAT...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGAAGCGGATTCTGAATTaGGAGCAGAAGAACTTTGTT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMKRILN*EQKNFV
Trigger: AACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTACCCTTTCCTCTATCTaGATCATACTATTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTTLSSI*IILLAS
Trigger: TGAAGCTAATAGTATGATTCAGATAGAGGAAAGGGT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTACTAACCATTACAACTaGACCAGAGGGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISTNHYN*TRGISS
Trigger: GGAGGAAATCCCTCTGGTTCAGTTGTAATGGTTAGT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTATAAGCAGAACAGGTTaGAGACTCTTGAACAATTCA +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTISRTG*RLLNNS
Trigger: TGAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTAT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCTGGGCACAAAGGACTaGTTCAAACATAAGCATTGC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISLGTKD*FKHKHC
Trigger: GCAATGCTTATGTTTGAATCAGTCCTTTGTGCCCAG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358367.8
ENST00000608859.5
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTGTTATTCTAGGTAGATaGCACATATTCTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTVILGR*HIFSLL
Trigger: AAGAAGGGAGAATATGTGTCATCTACCTAGAATAAC...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCCACTGCCATCAAAATaGGGGGAAATAAATGTTAAT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTPLPSK*GEINVN
Trigger: ATTAACATTTATTTCCCCTCATTTTGATGGCAGTGG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTGTACACGGGTTCATCTaGAGCAAATGTCACACATTC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISVHGFI*SKCHTF
Trigger: GAATGTGTGACATTTGCTGCAGATGAACCCGTGTAC...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTGCAGAAGAACTTTGTTaGCTCCTGATGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISAEELC*LLMDHQ
Trigger: CTGATGATCCATCAGGAGGCAACAAAGTTCTTCTGC...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCAATACGTTGCACTTTaGCAACAGGGTTGCATACAG +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISQYVAL*QQGCIQ
Trigger: CTGTATGCAACCCTGTTGGCAAAGTGCAACGTATTG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAATATAACAATACGTTaGACTTTGCCAACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTNITIR*TLPTGL
Trigger: CAACCCTGTTGGCAAAGTGCAACGTATTGTTATATT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTTTCAAACTCAACCATTaGTTGTATCCCATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVFKLNH*LYPISL
Trigger: AAGAGAAATGGGATACAAGCAATGGTTGAGTTTGAA...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTACCCATTTCTACCAGTaGTGTACCAGGAATGGTCTT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISTHFYQ*CTRNGL
Trigger: AAGACCATTCCTGGTACAGCACTGGTAGAAATGGGT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCAAAATCTTTGTAGCTaGTGGTACCATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISQNLCS*WYHPPA
Trigger: AGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTGCTGCTTTAGCTTTCTaGGCACAAAGGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISAALAF*AQRTDS
Trigger: TGAATCAGTCCTTTGTGCCCAGAAAGCTAAAGCAGC...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAAAATGGCTTGTCTCTaGCGACCCTTTCCTCTATCT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISKMACL*RPFPLS
Trigger: AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAATCTTTGTAGCTGCTaGTACCATCCTCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISNLCSC*YHPPAQ
Trigger: TTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGATATTCTTAGATGCTTaGCCAGCACTTGTAAAGCGA +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMIFLDA*PALVKR
Trigger: TCGCTTTACAAGTGCTGGCCAAGCATCTAAGAATAT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTATAAAATCTCCAAACTaGACTAGAAACAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTIKSPN*TRNRGM
Trigger: CATGCCTCTGTTTCTAGTCCAGTTTGGAGATTTTAT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTATGTGTAGTAGGATTTaGATACAGAGATGGGATTTC +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTMCSRI*IQRWDF
Trigger: GAAATCCCATCTCTGTATCCAAATCCTACTACACAT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAACATGGACGACGGGTaGAACAGAAACTTTATGATG +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISNMDDG*NRNFMM
Trigger: CATCATAAAGTTTCTGTTTCACCCGTCGTCCATGTT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAACTTTGTTGCCTCCTaGTGGATCATCAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISNFVAS*WIISIS
Trigger: GGAAATACTGATGATCCATCAGGAGGCAACAAAGTT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp TTTTTCTATCTGTGTGGATTGGTTGAGCATTATCAATTCCCAAGACCTGTTAATTCTGTGTGGATTGGTTaGGCATTATCAATTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FFYLCGLVEHYQFPRPVNSVWIG*ALSIPK
Trigger: CTTGGGAATTGATAATGCTCAACCAATCCACACAGA...ATTAACAGGTCTTGGGAATTGATAATGCTCAACCAATCCACACAGATAGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCTTTGCCAACAGGGTTaGATACAGTATATAAAACAT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTLCQQG*IQYIKH
Trigger: ATGTTTTATATACTGTATGCAACCCTGTTGGCAAAG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTTCAAACTCAACCATTaGTTGTATCCCATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTFKLNH*LYPISL
Trigger: AAGAGAAATGGGATACAAGCAATGGTTGAGTTTGAA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272249.7
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCTACTGCATCAGTTTTaGACTCCCATTCTAATAGCC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISLLHQF*TPILIA
Trigger: GGCTATTAGAATGGGAGTGCAAAACTGATGCAGTAG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp ATACATACAACTTGTATAAATGGGCACAGTCTATCATGGTGTTCATCCCATGCAATGGTGTTCATCCCATaGAATTCTGAAGTACTGTTA +
Preference number: 4 (lower is better)
Translates to: IHTTCINGHSLSWCSSHAMVFIP*NSEVLL
Trigger: TAACAGTACTTCAGAATTGCATGGGATGAACACCAT...TGCATGGGATGAACACCATGATAGACTGTGCCCATTTATACAAGTTGTATGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTATCATCAGTATTTCCTaGCCGAGTGATCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISIISIS*PSDPFA
Trigger: AGCAAAAGGATCACTCGGCCAGGAAATACTGATGAT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAACATCCACTGTAATTaGATAAAGCGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: NLQTGLETEACQYKWTVTNIHCN*IKRILN
Trigger: ATTCAGAATCCGCTTTATCCAATTACAGTGGATGTT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTGCCCAGAAAGTGTTTTaGCTGAAGGTTTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISAQKVF*LKVLHQ
Trigger: TTGATGCAAAACCTTCAGCCAAAACACTTTCTGGGC...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTCTGAAGCCCACCCATaGATCCCAGATTATTATCTA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISSEAHP*IPDYYL
Trigger: TAGATAATAATCTGGGATCCATGGGTGGGCTTCAGA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp TTGAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCTCTATCTGTGTGGATTaGTTGAGCATTATCAATTCC +
Preference number: 4 (lower is better)
Translates to: LSIINSQDLLINWSWLFASICVD*LSIINS
Trigger: GGAATTGATAATGCTCAACCAATCCACACAGATAGA...GGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGATTCACTTATTTTGGTaGAGAGAGAGCCTTACAGAT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMIHLFW*RESLTD
Trigger: ATCTGTAAGGCTCTCTCTCCACCAAAATAAGTGAAT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGACAATTCACTTATTTTaGTGGAGAGAGAGCCTTACA +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMTIHLF*WRESLT
Trigger: TGTAAGGCTCTCTCTCCACCAAAATAAGTGAATTGT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGATGTGTAGTAGGATTTaGATACAGAGATGGGATTTC +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMMCSRI*IQRWDF
Trigger: GAAATCCCATCTCTGTATCCAAATCCTACTACACAT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAAGCGGATTCTGAATTaGGAGCAGAAGAACTTTGTT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISKRILN*EQKNFV
Trigger: AACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAGAAAGTGTTTTGGCTaGAGGTTTTGCATCAAACAC +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISRKCFG*RFCIKH
Trigger: GTGTTTGATGCAAAACCTTCAGCCAAAACACTTTCT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGCTTTGCCAACAGGGTTaGATACAGTATATAAAACAT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMLCQQG*IQYIKH
Trigger: ATGTTTTATATACTGTATGCAACCCTGTTGGCAAAG...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGTTCAAACTCAACCATTaGTTGTATCCCATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMFKLNH*LYPISL
Trigger: AAGAGAAATGGGATACAAGCAATGGTTGAGTTTGAA...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGAACATCCACTGTAATTaGATAAAGCGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMNIHCN*IKRILN
Trigger: ATTCAGAATCCGCTTTATCCAATTACAGTGGATGTT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CCA 90 bp TTGAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAACATCCACTGTAATTaGATAAAGCGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LSIINSQDLLINWSWLFANIHCN*IKRILN
Trigger: ATTCAGAATCCGCTTTATCCAATTACAGTGGATGTT...GGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTATATTCTTAGATGCTTaGCCAGCACTTGTAAAGCGA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISIFLDA*PALVKR
Trigger: TCGCTTTACAAGTGCTGGCCAAGCATCTAAGAATAT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTCAATGTATAGGGATTaGAACCATTCGGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISSMYRD*NHSALL
Trigger: TAAGAGTGCCGAATGGTTCCAATCCCTATACATTGA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp AGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATGACCTGTTAATAAACTaGTCCTGGTTATTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SIINSQDLLINWSWLFANDLLIN*SWLFAN
Trigger: ATTGGCAAATAACCAGGACCAGTTTATTAACAGGTC...ATTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTATAAGCAGAACAGGTTaGAGACTCTTGAACAATTCA +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISISRTG*RLLNNS
Trigger: TGAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTAT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTCCAGCTCAAATATTTaGCTTGGAACAACTGAATGT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISSSSNI*LGTTEC
Trigger: ACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR TCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTGTTATTCTAGGTAGATaGCACATATTCTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISVILGR*HIFSLL
Trigger: AAGAAGGGAGAATATGTGTCATCTACCTAGAATAAC...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAATATAACAATACGTTaGACTTTGCCAACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISNITIR*TLPTGL
Trigger: CAACCCTGTTGGCAAAGTGCAACGTATTGTTATATT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTATAAAATCTCCAAACTaGACTAGAAACAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISIKSPN*TRNRGM
Trigger: CATGCCTCTGTTTCTAGTCCAGTTTGGAGATTTTAT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
3UTR CAA 72 bp ACCTTAAGGGAAATCAGACCAATATATACATACAACTaGTATAAATGGGCACAGTCTATCATGGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: TLREIRPIYTYN*YKWAQSIMVFI
Trigger: GATGAACACCATGATAGACTGTGCCCATTTATACAAGTTGTATGTATATATTGGTCTGATTTCCCTTAAGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp TTTTTCTATCTGTGTGGATTGGTTGAGCATTATCAATTCCCAAGACCTGTTAATCTTTGCCAACAGGGTTaGATACAGTATATAAAACAT +
Preference number: 4 (lower is better)
Translates to: FFYLCGLVEHYQFPRPVNLCQQG*IQYIKH
Trigger: ATGTTTTATATACTGTATGCAACCCTGTTGGCAAAG...ATTAACAGGTCTTGGGAATTGATAATGCTCAACCAATCCACACAGATAGAAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR GCA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCTTTGCCAACAGGGTTaGATACAGTATATAAAACAT +
Preference number: 4 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISLCQQG*IQYIKH
Trigger: ATGTTTTATATACTGTATGCAACCCTGTTGGCAAAG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS GCA 90 bp CGCCTCTTCTGCGAGGGTCTCCGCGGCCCGGCCGTCCGCGGGGACTaGGCGGCCAGGAGACTGGCGGCTGAGAAGCGCGGACGGACTGAG +
Preference number: 5 (lower is better)
Translates to: RLFCEGLRGPAVRGD*AARRLAAEKRGRTE
Trigger: CTCAGTCCGTCCGCGCTTCTCAGCCGCCAGTCTCCTGGCCGCGCAGTCCCCGCGGACGGCCGGGCCGCGGAGACCCTCGCAGAAGAGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409328.5
ENST00000449105.8
ENST00000608859.5
CDS CCA 90 bp GCGCGCAAGGCGCGCCGCCTGGGAGTAGTTGCGACCCGCAACCGTTaGCGCTATGCGGCTCCTACCCGAGGCCAGGCGTGGAGTGAACAC +
Preference number: 5 (lower is better)
Translates to: ARKARRLGVVATRNR*RYAAPTRGQAWSEH
Trigger: GTGTTCACTCCACGCCTGGCCTCGGGTAGGAGCCGCATAGCGCCAACGGTTGCGGGTCGCAACTACTCCCAGGCGGCGCGCCTTGCGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS CCA 90 bp CGCTCCCTGCCCGGAGGAGCGAATCTAAGGATGGGGACGCAACCGTaGCTTCCGGTCTTCCCTCCTCCCCTAAGCCGCTCCCAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: RSLPGGANLRMGTQP*LPVFPPPLSRSQPR
Trigger: GCGCGGCTGGGAGCGGCTTAGGGGAGGAGGGAAGACCGGAAGCCACGGTTGCGTCCCCATCCTTAGATTCGCTCCTCCGGGCAGGGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358367.8
ENST00000409636.5
ENST00000608859.5
CDS TCA 90 bp CAACCGTTGGCGCTATGCGGCTCCTACCCGAGGCCAGGCGTGGAGTaGACACGGACGAGCGACGAGAAGTGCGGAGAGGCTAGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: QPLALCGSYPRPGVE*TRTSDEKCGEARAA
Trigger: CGCAGCCCTAGCCTCTCCGCACTTCTCGTCGCTCGTCCGTGTTCACTCCACGCCTGGCCTCGGGTAGGAGCCGCATAGCGCCAACGGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS CCA 90 bp ACCCGCAACCGTTGGCGCTATGCGGCTCCTACCCGAGGCCAGGCGTaGAGTGAACACGGACGAGCGACGAGAAGTGCGGAGAGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: TRNRWRYAAPTRGQA*SEHGRATRSAERLG
Trigger: CCCTAGCCTCTCCGCACTTCTCGTCGCTCGTCCGTGTTCACTCCACGCCTGGCCTCGGGTAGGAGCCGCATAGCGCCAACGGTTGCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS TCA 90 bp TCTCGCCTTCCTCGGCCGAGTAGTCGATCTCCCCCTCCTCGGTCTTaGGACGCTTGGCCTGGCTCTCGTACTCCCGGTCCTCCTCGTACG +
Preference number: 5 (lower is better)
Translates to: SRLPRPSSRSPPPRS*DAWPGSRTPGPPRT
Trigger: CGTACGAGGAGGACCGGGAGTACGAGAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGGAGATCGACTACTCGGCCGAGGAAGGCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000449105.8
ENST00000498516.1
ENST00000608859.5
CDS-3UTR CAA 90 bp GTGAATTGCGAGTCTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGTCCCCCTCCTCGGTCTaGAGACGCTTGGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: VNCESEFFRGLFADADVVSPSSV*RRLAWL
Trigger: GAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGGA...CACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAGACTCGCAATTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTTCCCCCTCCTCGGTCTaGAGACGCTTGGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLSPSSV*RRLAWL
Trigger: GAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGGA...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS TCA 90 bp TGCTTCCACCACAGATTCACAGAGTCCTCGAACATGGACGACGGGTaGAACAGAAACTTTATGATGACTTCCACCTGCCTCCGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: CFHHRFTESSNMDDG*NRNFMMTSTCLRLR
Trigger: TCTCAGCCGGAGGCAGGTGGAAGTCATCATAAAGTTTCTGTTTCACCCGTCGTCCATGTTCGAGGACTCTGTGAATCTGTGGTGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000449105.8
ENST00000608859.5
CDS GCA 90 bp CACATAGCATATTGTCCCAAATTTTTCCAGCGCTTCCACGAGGTCTaGTTCCACCACAGATTCACAGAGTCCTCGAACATGGACGACGGG +
Preference number: 5 (lower is better)
Translates to: HIAYCPKFFQRFHEV*FHHRFTESSNMDDG
Trigger: CCCGTCGTCCATGTTCGAGGACTCTGTGAATCTGTGGTGGAAGCAGACCTCGTGGAAGCGCTGGAAAAATTTGGGACAATATGCTATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000425682.1
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTCCCCCTCCTCGGTCTaGAGACGCTTGGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTSPSSV*RRLAWL
Trigger: GAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGGA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp TCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGGTCTTCTTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCC +
Preference number: 5 (lower is better)
Translates to: STAYSSPISTSAVPGMVFFSQNG*SLATLS
Trigger: GGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAA...GAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS TCA 90 bp TGCTTCCACCACAGATTCACAGAGTCCTCGAACATGGACGACGGGTaGAACAGAAACTTTATGATGACTTCCACCTGCCTCCTGCATTTA +
Preference number: 5 (lower is better)
Translates to: CFHHRFTESSNMDDG*NRNFMMTSTCLLHL
Trigger: TAAATGCAGGAGGCAGGTGGAAGTCATCATAAAGTTTCTGTTTCACCCGTCGTCCATGTTCGAGGACTCTGTGAATCTGTGGTGGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425682.1
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTCCCCCTCCTCGGTCTaGAGACGCTTGGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISSPSSV*RRLAWL
Trigger: GAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGGA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp ATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGAAGAGAGAGAGCTGCTaGGAGAAATGCAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: MMKCRVSLLESSILLNASKRESC*EKCKSL
Trigger: CAAGGACTTGCATTTCTCCAAGCAGCTCTCTCTCTT...CGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp ATGCCGATGTTGTGCATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCTTGCTGATGCCGATGTaGTGCATGATGAAGTGTAGA +
Preference number: 5 (lower is better)
Translates to: MPMLCMMKCRVSLLESSILLMPM*CMMKCR
Trigger: TCTACACTTCATCATGCACAACATCGGCATCAGCAA...GATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCATGCACAACATCGGCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp GAAGAAGGGTGTTCTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTTATATTCTTAGATGCTaGGCCAGCACTTGTAAAGCG +
Preference number: 5 (lower is better)
Translates to: EEGCSPKMACLWRPFPLSYILRC*ASTCKA
Trigger: CGCTTTACAAGTGCTGGCCAAGCATCTAAGAATATA...AGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAACACCCTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp TCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGGTCTTCAGCAGAAGAACTTTGTaGCCTCCTGATGGATCATCA +
Preference number: 5 (lower is better)
Translates to: STAYSSPISTSAVPGMVFSRRTL*PPDGSS
Trigger: TGATGATCCATCAGGAGGCAACAAAGTTCTTCTGCT...GAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCC +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTFSQNG*SLATLS
Trigger: GGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp ATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTTCTTAATGCCTCGAAAGCGGATTCTGAATaGAGAGCAGAAGAACTTTGT +
Preference number: 5 (lower is better)
Translates to: MMKCRVSLLESSILLNASKADSE*RAEELC
Trigger: ACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTTT...CGAGGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp TTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTAGAGTCACAATACGTTGCACTTaGCCAACAGGGTTGCATACA +
Preference number: 5 (lower is better)
Translates to: FSEGFLLMPMLCMMKCRVTIRCT*PTGLHT
Trigger: TGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGT...GACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGTTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCC +
Preference number: 5 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMFSQNG*SLATLS
Trigger: GGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAA...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp TTGAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATGCCTCGTCCAGCTaGGGGGAAAGTCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: LSIINSQDLLINWSWLFANASSS*GESPFH
Trigger: ATGGAAAGGACTTTCCCCCAAGCTGGACGAGGCATT...GGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS CCA 90 bp TCCTGCATTTACTTTAACAGTCTGACCACAAAGGTATTTCTTCTCTaGGCTGAAGGACCACTGAAGTTGTGCAAAACCCTTTTCGGTTAC +
Preference number: 5 (lower is better)
Translates to: SCIYFNSLTTKVFLL*AEGPLKLCKTLFGY
Trigger: GTAACCGAAAAGGGTTTTGCACAACTTCAGTGGTCCTTCAGCCCAGAGAAGAAATACCTTTGTGGTCAGACTGTTAAAGTAAATGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425682.1
CDS-3UTR CAA 90 bp TTGCAAAATCTTTGTAGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAGAGCAGAAGAACTTaGTTGCCTCCTGATGGATCA +
Preference number: 5 (lower is better)
Translates to: LQNLCSCWYHPPAQIFDLESRRT*LPPDGS
Trigger: TGATCCATCAGGAGGCAACAAAGTTCTTCTGCTCTC...CAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTGAGAGCAGAAGAACTTaGTTGCCTCCTGATGGATCA +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTESRRT*LPPDGS
Trigger: TGATCCATCAGGAGGCAACAAAGTTCTTCTGCTCTC...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTACAATACGTTGCACTTaGCCAACAGGGTTGCATACA +
Preference number: 5 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVTIRCT*PTGLHT
Trigger: TGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGT...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp GTGAATTGCGAGTCTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGTATATATCAGCTCCATaGAGTGCTGCTTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: VNCESEFFRGLFADADVVYISAP*SAALAF
Trigger: GAAAGCTAAAGCAGCACTCAATGGAGCTGATATATA...CACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAGACTCGCAATTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTTATATTCTTAGATGCTaGGCCAGCACTTGTAAAGCG +
Preference number: 5 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLYILRC*ASTCKA
Trigger: CGCTTTACAAGTGCTGGCCAAGCATCTAAGAATATA...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTAGCCCAGAAAGTGTTTaGGCTGAAGGTTTTGCATCA +
Preference number: 5 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVSPESV*AEGFAS
Trigger: TGATGCAAAACCTTCAGCCAAAACACTTTCTGGGCT...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp CTCCCAAAATGGCTTGTCTCTGGCGACCCTTTCCTCTATCTGAATCATACTATTTCTACTGCATCAGTTTaGCACTCCCATTCTAATAGC +
Preference number: 5 (lower is better)
Translates to: LPKWLVSGDPFLYLNHTISTASV*HSHSNS
Trigger: GCTATTAGAATGGGAGTGCAAAACTGATGCAGTAGA...AATAGTATGATTCAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTTCTACTGCATCAGTTTaGCACTCCCATTCTAATAGC +
Preference number: 5 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLSTASV*HSHSNS
Trigger: GCTATTAGAATGGGAGTGCAAAACTGATGCAGTAGA...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS CCA 90 bp CATCCAGCATATATATCAGCTCCATTGAGTGCTGCTTTAGCTTTCTaGGCACAAAGGACTGATTCAAACATAAGCATTGCTTGTATCCCA +
Preference number: 5 (lower is better)
Translates to: HPAYISAPLSAALAF*AQRTDSNISIACIP
Trigger: TGGGATACAAGCAATGCTTATGTTTGAATCAGTCCTTTGTGCCCAGAAAGCTAAAGCAGCACTCAATGGAGCTGATATATATGCTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358367.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTTCATCACATAGCATATaGTCCCAAATTTTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLSSHSI*SQIFPA
Trigger: CGCTGGAAAAATTTGGGACAATATGCTATGTGATGA...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAGCAGAAGAACTTTGTaGCCTCCTGATGGATCATCA +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTSRRTL*PPDGSS
Trigger: TGATGATCCATCAGGAGGCAACAAAGTTCTTCTGCT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGGAGAGCAGAAGAACTTaGTTGCCTCCTGATGGATCA +
Preference number: 5 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMESRRT*LPPDGS
Trigger: TGATCCATCAGGAGGCAACAAAGTTCTTCTGCTCTC...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTAAAGCGGATTCTGAATaGAGAGCAGAAGAACTTTGT +
Preference number: 5 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLKADSE*RAEELC
Trigger: ACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTTT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTACAATACGTTGCACTTaGCCAACAGGGTTGCATACA +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTTIRCT*PTGLHT
Trigger: TGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CTGAGTTTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTGAATATAACAATACGTaGCACTTTGCCAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: LSFSEGFLLMPMLCMMKCEYNNT*HFANRV
Trigger: AACCCTGTTGGCAAAGTGCAACGTATTGTTATATTC...ACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAAACTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp TCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGGTCTTCATTCAAACTCAACCATaGCTTGTATCCCATTTCTCT +
Preference number: 5 (lower is better)
Translates to: STAYSSPISTSAVPGMVFIQTQP*LVSHFS
Trigger: AGAGAAATGGGATACAAGCAATGGTTGAGTTTGAAT...GAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCC +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISFSQNG*SLATLS
Trigger: GGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTCCATTCTGTAACGACTaGGTAAAGGCAATAATGGAC +
Preference number: 5 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVPFCND*VKAIMD
Trigger: GTCCATTATTGCCTTTACCAAGTCGTTACAGAATGG...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp TCTACAGCATACTCATCACCCATTTCTACCAGTGCTGTACCAGGAATGGTCTTCTATAAGCAGAACAGGTaGAAGACTCTTGAACAATTC +
Preference number: 5 (lower is better)
Translates to: STAYSSPISTSAVPGMVFYKQNR*KTLEQF
Trigger: GAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTATA...GAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGTGATGAGTATGCTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAGCCCAGAAAGTGTTTaGGCTGAAGGTTTTGCATCA +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTSPESV*AEGFAS
Trigger: TGATGCAAAACCTTCAGCCAAAACACTTTCTGGGCT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp ATGTTGTGCATGATGAAGTGTAGAGTCAGCCTGCTGGAGTCCTCTATCCTTCTTTTGCCAATTAACAATTaGAATCTAAGCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: MLCMMKCRVSLLESSILLLPINN*NLSCTQ
Trigger: CTGTGTGCAGCTTAGATTCAAATTGTTAATTGGCAA...AAGAAGGATAGAGGACTCCAGCAGGCTGACTCTACACTTCATCATGCACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp TTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTAGAGTCATCTGTGTGGATTGGTaGAGCATTATCAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: FSEGFLLMPMLCMMKCRVICVDW*SIINSQ
Trigger: TTGGGAATTGATAATGCTCAACCAATCCACACAGAT...GACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp CAATGTATAGGGATTGGAACCATTCGGCACTCTTATCTGATAGTGATTCAGTGCTCATCACATAGCATATaGTCCCAAATTTTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: QCIGIGTIRHSYLIVIQCSSHSI*SQIFPA
Trigger: CGCTGGAAAAATTTGGGACAATATGCTATGTGATGA...GCACTGAATCACTATCAGATAAGAGTGCCGAATGGTTCCAATCCCTATACATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp GAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAAAGCAGAAGAACTTTGTaGCCTCCTGATGGATCATCA +
Preference number: 5 (lower is better)
Translates to: EHYQFPRPVNKLVLVICQSRRTL*PPDGSS
Trigger: TGATGATCCATCAGGAGGCAACAAAGTTCTTCTGCT...TTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp AGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATGAGAGCAGAAGAACTTaGTTGCCTCCTGATGGATCA +
Preference number: 5 (lower is better)
Translates to: SIINSQDLLINWSWLFANESRRT*LPPDGS
Trigger: TGATCCATCAGGAGGCAACAAAGTTCTTCTGCTCTC...ATTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTACTTTGCCAACAGGGTaGCATACAGTATATAAAACA +
Preference number: 5 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLTLPTG*HTVYKT
Trigger: TGTTTTATATACTGTATGCAACCCTGTTGGCAAAGT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGACAATACGTTGCACTTaGCCAACAGGGTTGCATACA +
Preference number: 5 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMTIRCT*PTGLHT
Trigger: TGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGT...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp AGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGGAACAACTGAATGTTGAATATAACAATACGTaGCACTTTGCCAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: SCWYHPPAQIFDLEQLNVEYNNT*HFANRV
Trigger: AACCCTGTTGGCAAAGTGCAACGTATTGTTATATTC...AACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTAAACTCAACCATTGCTaGTATCCCATTTCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLKLNHC*YPISLE
Trigger: TTCAAGAGAAATGGGATACAAGCAATGGTTGAGTTT...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp TTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTAGAGTCAAACTCAACCATTGCTaGTATCCCATTTCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: FSEGFLLMPMLCMMKCRVKLNHC*YPISLE
Trigger: TTCAAGAGAAATGGGATACAAGCAATGGTTGAGTTT...GACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTCCATTCTGTAACGACTaGGTAAAGGCAATAATGGAC +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTPFCND*VKAIMD
Trigger: GTCCATTATTGCCTTTACCAAGTCGTTACAGAATGG...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CAGCAGTATAGGGCTTACACACCAGTGTATAAATCTATCAGCAAGGCCCAACTTTATAAGCAGAACAGGTaGAAGACTCTTGAACAATTC +
Preference number: 5 (lower is better)
Translates to: QQYRAYTPVYKSISKAQLYKQNR*KTLEQF
Trigger: GAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTATA...AAGTTGGGCCTTGCTGATAGATTTATACACTGGTGTGTAAGCCCTATACTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTATATTCTTAGATGCTaGGCCAGCACTTGTAAAGCG +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTYILRC*ASTCKA
Trigger: CGCTTTACAAGTGCTGGCCAAGCATCTAAGAATATA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTCTACTGCATCAGTTTaGCACTCCCATTCTAATAGC +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTSTASV*HSHSNS
Trigger: GCTATTAGAATGGGAGTGCAAAACTGATGCAGTAGA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTACGAGTTGGCATTGCTaGTATCCCATTTCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTTSWHC*YPISLE
Trigger: TTCAAGAGAAATGGGATACAAGCAATGCCAACTCGT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378915.7
CDS-3UTR CAA 90 bp AGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCAATTTTTCAGAGGGCTTTTaGCTGATGCCGATGTTGTGC +
Preference number: 5 (lower is better)
Translates to: SIINSQDLLINWSWLFANFSEGF*LMPMLC
Trigger: GCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAA...ATTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp TTTTCAGAGGGCTTTTTGCTGATGCCGATGTTGTGCATGATGAAGTGTAGAGTCTTCTATCTGTGTGGATaGGTTGAGCATTATCAATTC +
Preference number: 5 (lower is better)
Translates to: FSEGFLLMPMLCMMKCRVFYLCG*VEHYQF
Trigger: GAATTGATAATGCTCAACCAATCCACACAGATAGAA...GACTCTACACTTCATCATGCACAACATCGGCATCAGCAAAAAGCCCTCTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTCATCACATAGCATATaGTCCCAAATTTTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTSSHSI*SQIFPA
Trigger: CGCTGGAAAAATTTGGGACAATATGCTATGTGATGA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTGAGAGCAGAAGAACTTaGTTGCCTCCTGATGGATCA +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISESRRT*LPPDGS
Trigger: TGATCCATCAGGAGGCAACAAAGTTCTTCTGCTCTC...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTAAAGCGGATTCTGAATaGAGAGCAGAAGAACTTTGT +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTKADSE*RAEELC
Trigger: ACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTTT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CAATGTATAGGGATTGGAACCATTCGGCACTCTTATCTGATAGTGATTCAGTGCACTTTGCCAACAGGGTaGCATACAGTATATAAAACA +
Preference number: 5 (lower is better)
Translates to: QCIGIGTIRHSYLIVIQCTLPTG*HTVYKT
Trigger: TGTTTTATATACTGTATGCAACCCTGTTGGCAAAGT...GCACTGAATCACTATCAGATAAGAGTGCCGAATGGTTCCAATCCCTATACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTGAATATAACAATACGTaGCACTTTGCCAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTEYNNT*HFANRV
Trigger: AACCCTGTTGGCAAAGTGCAACGTATTGTTATATTC...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp TTGCAAAATCTTTGTAGCTGCTGGTACCATCCTCCAGCTCAAATATTTGACTTGTATATATCAGCTCCATaGAGTGCTGCTTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LQNLCSCWYHPPAQIFDLYISAP*SAALAF
Trigger: GAAAGCTAAAGCAGCACTCAATGGAGCTGATATATA...CAAGTCAAATATTTGAGCTGGAGGATGGTACCAGCAGCTACAAAGATTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTATATATCAGCTCCATaGAGTGCTGCTTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTYISAP*SAALAF
Trigger: GAAAGCTAAAGCAGCACTCAATGGAGCTGATATATA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AGGCTAAGGAAAGAGAGAGTATTCACAAAGCAAACTTCATTAACAGCAGTCATGTCTACTGCATCAGTTTaGCACTCCCATTCTAATAGC +
Preference number: 5 (lower is better)
Translates to: RLRKERVFTKQTSLTAVMSTASV*HSHSNS
Trigger: GCTATTAGAATGGGAGTGCAAAACTGATGCAGTAGA...CATGACTGCTGTTAATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp ATACATACAACTTGTATAAATGGGCACAGTCTATCATGGTGTTCATCCCATGCATCATCACATAGCATATaGTCCCAAATTTTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: IHTTCINGHSLSWCSSHASSHSI*SQIFPA
Trigger: CGCTGGAAAAATTTGGGACAATATGCTATGTGATGA...TGCATGGGATGAACACCATGATAGACTGTGCCCATTTATACAAGTTGTATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAGCAGAAGAACTTTGTaGCCTCCTGATGGATCATCA +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISSRRTL*PPDGSS
Trigger: TGATGATCCATCAGGAGGCAACAAAGTTCTTCTGCT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTACTTTGCCAACAGGGTaGCATACAGTATATAAAACA +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTTLPTG*HTVYKT
Trigger: TGTTTTATATACTGTATGCAACCCTGTTGGCAAAGT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTACAATACGTTGCACTTaGCCAACAGGGTTGCATACA +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISTIRCT*PTGLHT
Trigger: TGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTATTCAAACTCAACCATaGCTTGTATCCCATTTCTCT +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTIQTQP*LVSHFS
Trigger: AGAGAAATGGGATACAAGCAATGGTTGAGTTTGAAT...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272249.7
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp AATCTCCAAACTGGACTAGAAACAGAGGCATGTCAATACAAATGGACAGTGACTTATAAGCAGAACAGGTaGAAGACTCTTGAACAATTC +
Preference number: 5 (lower is better)
Translates to: NLQTGLETEACQYKWTVTYKQNR*KTLEQF
Trigger: GAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTATA...AGTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCCAGTTTGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAGCCCAGAAAGTGTTTaGGCTGAAGGTTTTGCATCA +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISSPESV*AEGFAS
Trigger: TGATGCAAAACCTTCAGCCAAAACACTTTCTGGGCT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp TTGAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCACTTTGCCAACAGGGTaGCATACAGTATATAAAACA +
Preference number: 5 (lower is better)
Translates to: LSIINSQDLLINWSWLFATLPTG*HTVYKT
Trigger: TGTTTTATATACTGTATGCAACCCTGTTGGCAAAGT...GGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp TTGAGCATTATCAATTCCCAAGACCTGTTAATAAACTGGTCCTGGTTATTTGCCATTCAAACTCAACCATaGCTTGTATCCCATTTCTCT +
Preference number: 5 (lower is better)
Translates to: LSIINSQDLLINWSWLFAIQTQP*LVSHFS
Trigger: AGAGAAATGGGATACAAGCAATGGTTGAGTTTGAAT...GGCAAATAACCAGGACCAGTTTATTAACAGGTCTTGGGAATTGATAATGCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410076.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTCCATTCTGTAACGACTaGGTAAAGGCAATAATGGAC +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISPFCND*VKAIMD
Trigger: GTCCATTATTGCCTTTACCAAGTCGTTACAGAATGG...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTATATTCTTAGATGCTaGGCCAGCACTTGTAAAGCG +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISYILRC*ASTCKA
Trigger: CGCTTTACAAGTGCTGGCCAAGCATCTAAGAATATA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTCTACTGCATCAGTTTaGCACTCCCATTCTAATAGC +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISSTASV*HSHSNS
Trigger: GCTATTAGAATGGGAGTGCAAAACTGATGCAGTAGA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTTAGACGAGTTGGCATaGCTTGTATCCCATTTCTCT +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISLDELA*LVSHFS
Trigger: AGAGAAATGGGATACAAGCAATGCCAACTCGTCTAA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378915.7
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTCATCACATAGCATATaGTCCCAAATTTTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISSSHSI*SQIFPA
Trigger: CGCTGGAAAAATTTGGGACAATATGCTATGTGATGA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAAAGCGGATTCTGAATaGAGAGCAGAAGAACTTTGT +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISKADSE*RAEELC
Trigger: ACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTTT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTGAATATAACAATACGTaGCACTTTGCCAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISEYNNT*HFANRV
Trigger: AACCCTGTTGGCAAAGTGCAACGTATTGTTATATTC...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTATATATCAGCTCCATaGAGTGCTGCTTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISYISAP*SAALAF
Trigger: GAAAGCTAAAGCAGCACTCAATGGAGCTGATATATA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTACTTTGCCAACAGGGTaGCATACAGTATATAAAACA +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISTLPTG*HTVYKT
Trigger: TGTTTTATATACTGTATGCAACCCTGTTGGCAAAGT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTAAACTCAACCATTGCTaGTATCCCATTTCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISKLNHC*YPISLE
Trigger: TTCAAGAGAAATGGGATACAAGCAATGGTTGAGTTT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272249.7
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTATTCAAACTCAACCATaGCTTGTATCCCATTTCTCT +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISIQTQP*LVSHFS
Trigger: AGAGAAATGGGATACAAGCAATGGTTGAGTTTGAAT...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272249.7
ENST00000409636.5
ENST00000449105.8
CDS-3UTR CAA 90 bp CATACTGTACACGTGTATCCATGTCTGTTAGCCTTTCAGAAATATAAAATCAGTTATAAGCAGAACAGGTaGAAGACTCTTGAACAATTC +
Preference number: 5 (lower is better)
Translates to: HTVHVYPCLLAFQKYKISYKQNR*KTLEQF
Trigger: GAATTGTTCAAGAGTCTTCAACCTGTTCTGCTTATA...ACTGATTTTATATTTCTGAAAGGCTAACAGACATGGATACACGTGTACAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS GCA 72 bp TGCGAGGGTCTCCGCGGCCCGGCCGTCCGCGGGGACTaGGCGGCCAGGAGACTGGCGGCTGAGAAGCGCGGA +
Preference number: 6 (lower is better)
Translates to: CEGLRGPAVRGD*AARRLAAEKRG
Trigger: TCCGCGCTTCTCAGCCGCCAGTCTCCTGGCCGCGCAGTCCCCGCGGACGGCCGGGCCGCGGAGACCCTCGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409328.5
ENST00000449105.8
ENST00000608859.5
CDS CCA 72 bp CTTCTCTCCCCGCGCCTTCTGAACTCGCCGCGGTCCTaGGAGGCCCGGCGCGCAAGGCGCGCCGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: LLSPRLLNSPRS*EARRARRAAWE
Trigger: CTCCCAGGCGGCGCGCCTTGCGCGCCGGGCCTCCCAGGACCGCGGCGAGTTCAGAAGGCGCGGGGAGAGAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS GCA 72 bp AGGCCCGGCGCGCAAGGCGCGCCGCCTGGGAGTAGTTaGGACCCGCAACCGTTGGCGCTATGCGGCTCCTAC +
Preference number: 6 (lower is better)
Translates to: RPGAQGAPPGSS*DPQPLALCGSY
Trigger: GTAGGAGCCGCATAGCGCCAACGGTTGCGGGTCGCAACTACTCCCAGGCGGCGCGCCTTGCGCGCCGGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS CCA 72 bp GCGCGCCGCCTGGGAGTAGTTGCGACCCGCAACCGTTaGCGCTATGCGGCTCCTACCCGAGGCCAGGCGTGG +
Preference number: 6 (lower is better)
Translates to: ARRLGVVATRNR*RYAAPTRGQAW
Trigger: CCACGCCTGGCCTCGGGTAGGAGCCGCATAGCGCCAACGGTTGCGGGTCGCAACTACTCCCAGGCGGCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS CAA 72 bp GGCGCGCCGCCTGGGAGTAGTTGCGACCCGCAACCGTaGGCGCTATGCGGCTCCTACCCGAGGCCAGGCGTG +
Preference number: 6 (lower is better)
Translates to: GAPPGSSCDPQP*ALCGSYPRPGV
Trigger: CACGCCTGGCCTCGGGTAGGAGCCGCATAGCGCCAACGGTTGCGGGTCGCAACTACTCCCAGGCGGCGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS TCA 72 bp TCCTCCTCGTACGTCTCCTTCTCTCCCCGCGCCTTCTaGACTCGCCGCGGTCCTGGGAGGCCCGGCGCGCAA +
Preference number: 6 (lower is better)
Translates to: SSSYVSFSPRAF*TRRGPGRPGAQ
Trigger: TTGCGCGCCGGGCCTCCCAGGACCGCGGCGAGTTCAGAAGGCGCGGGGAGAGAAGGAGACGTACGAGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS TCA 72 bp GCGCTATGCGGCTCCTACCCGAGGCCAGGCGTGGAGTaGACACGGACGAGCGACGAGAAGTGCGGAGAGGCT +
Preference number: 6 (lower is better)
Translates to: ALCGSYPRPGVE*TRTSDEKCGEA
Trigger: AGCCTCTCCGCACTTCTCGTCGCTCGTCCGTGTTCACTCCACGCCTGGCCTCGGGTAGGAGCCGCATAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS CCA 72 bp CGTTGGCGCTATGCGGCTCCTACCCGAGGCCAGGCGTaGAGTGAACACGGACGAGCGACGAGAAGTGCGGAG +
Preference number: 6 (lower is better)
Translates to: RWRYAAPTRGQA*SEHGRATRSAE
Trigger: CTCCGCACTTCTCGTCGCTCGTCCGTGTTCACTCCACGCCTGGCCTCGGGTAGGAGCCGCATAGCGCCAACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498516.1
CDS TCA 72 bp CCTCGGCCGAGTAGTCGATCTCCCCCTCCTCGGTCTTaGGACGCTTGGCCTGGCTCTCGTACTCCCGGTCCT +
Preference number: 6 (lower is better)
Translates to: PRPSSRSPPPRS*DAWPGSRTPGP
Trigger: AGGACCGGGAGTACGAGAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGGAGATCGACTACTCGGCCGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000449105.8
ENST00000498516.1
ENST00000608859.5
CDS CCA 72 bp CCCGGAGGAGCGAATCTAAGGATGGGGACGCAACCGTaGCTTCCGGTCTTCCCTCCTCCCCTAAGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: PGGANLRMGTQP*LPVFPPPLSRS
Trigger: GGAGCGGCTTAGGGGAGGAGGGAAGACCGGAAGCCACGGTTGCGTCCCCATCCTTAGATTCGCTCCTCCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358367.8
ENST00000409636.5
ENST00000608859.5
CDS CCA 72 bp TCGATCTCCCCCTCCTCGGTCTTGAGACGCTTGGCCTaGCTCTCGTACTCCCGGTCCTCCTCGTACGTCTCC +
Preference number: 6 (lower is better)
Translates to: SISPSSVLRRLA*LSYSRSSSYVS
Trigger: GGAGACGTACGAGGAGGACCGGGAGTACGAGAGCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGGAGATCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000449105.8
ENST00000498516.1
ENST00000608859.5
CDS TCA 72 bp CACAGATTCACAGAGTCCTCGAACATGGACGACGGGTaGAACAGAAACTTTATGATGACTTCCACCTGCCTC +
Preference number: 6 (lower is better)
Translates to: HRFTESSNMDDG*NRNFMMTSTCL
Trigger: GAGGCAGGTGGAAGTCATCATAAAGTTTCTGTTTCACCCGTCGTCCATGTTCGAGGACTCTGTGAATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000425682.1
ENST00000449105.8
ENST00000498516.1
ENST00000608859.5
CDS GCA 72 bp TATTGTCCCAAATTTTTCCAGCGCTTCCACGAGGTCTaGTTCCACCACAGATTCACAGAGTCCTCGAACATG +
Preference number: 6 (lower is better)
Translates to: YCPKFFQRFHEV*FHHRFTESSNM
Trigger: CATGTTCGAGGACTCTGTGAATCTGTGGTGGAAGCAGACCTCGTGGAAGCGCTGGAAAAATTTGGGACAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000425682.1
ENST00000449105.8
ENST00000608859.5
CDS CAA 72 bp ATGTCTAAACGAAGAAGGGTGTTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCCTCTATCTCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: MSKRRRVFSQNG*SLATLSSISSS
Trigger: GGAAGACGAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAACACCCTTCTTCGTTTAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS CAA 90 bp ATAGCCATCATGTCTAAACGAAGAAGGGTGTTCTCCCAAAATGGCTaGTCTCTGGCGACCCTTTCCTCTATCTCGTCTTCCCAAATATGG +
Preference number: 6 (lower is better)
Translates to: IAIMSKRRRVFSQNG*SLATLSSISSSQIW
Trigger: CCATATTTGGGAAGACGAGATAGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAACACCCTTCTTCGTTTAGACATGATGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000449105.8
ENST00000608859.5
CDS TCA 72 bp GACTTCCACCTGCCTCCTGCATTTACTTTAACAGTCTaGCCACAAAGGTATTTCTTCTCTGGGCTGAAGGAC +
Preference number: 6 (lower is better)
Translates to: DFHLPPAFTLTV*PQRYFFSGLKD
Trigger: GTCCTTCAGCCCAGAGAAGAAATACCTTTGTGGTCAGACTGTTAAAGTAAATGCAGGAGGCAGGTGGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425682.1
CDS GCA 72 bp AAAGCGGATTCTGAATTGAGAGCAGAAGAACTTTGTTaGCTCCTGATGGATCATCAGTATTTCCTGGCCGAG +
Preference number: 6 (lower is better)
Translates to: KADSELRAEELC*LLMDHQYFLAE
Trigger: CTCGGCCAGGAAATACTGATGATCCATCAGGAGGCAACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000425682.1
ENST00000449105.8
ENST00000488099.1
ENST00000608859.5
CDS GCA 72 bp TTACTTACTCGGCACTCTTATCTGATAGTGATTCAGTaGCGTAAGGGCTTCTACTGCATCAGTTTTGCACTC +
Preference number: 6 (lower is better)
Translates to: LLTRHSYLIVIQ*RKGFYCISFAL
Trigger: GAGTGCAAAACTGATGCAGTAGAAGCCCTTACGGCACTGAATCACTATCAGATAAGAGTGCCGAGTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441689.1
CDS GCA 72 bp AAAAGCCTGTTGACCAGCAATGTACACGGGTTCATCTaGAGCAAATGTCACACATTCTTTGGCACTATCTAT +
Preference number: 6 (lower is better)
Translates to: KSLLTSNVHGFI*SKCHTFFGTIY
Trigger: ATAGATAGTGCCAAAGAATGTGTGACATTTGCTGCAGATGAACCCGTGTACATTGCTGGTCAACAGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000425682.1
ENST00000449105.8
ENST00000608859.5
CDS CAA 90 bp CCAGCAATGTACACGGGTTCATCTGCAGCAAATGTCACACATTCTTaGGCACTATCTATGTTTTCAAATTCCACTAGAGCCTGTCGTTTA +
Preference number: 6 (lower is better)
Translates to: PAMYTGSSAANVTHS*ALSMFSNSTRACRL
Trigger: TAAACGACAGGCTCTAGTGGAATTTGAAAACATAGATAGTGCCAAAGAATGTGTGACATTTGCTGCAGATGAACCCGTGTACATTGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000425682.1
ENST00000449105.8
ENST00000608859.5
CDS GCA 72 bp GTATTTCTTCTCTGGGCTGAAGGACCACTGAAGTTGTaGAAAACCCTTTTCGGTTACAATGAATTACCAAAC +
Preference number: 6 (lower is better)
Translates to: VFLLWAEGPLKL*KTLFGYNELPN
Trigger: GTTTGGTAATTCATTGTAACCGAAAAGGGTTTTGCACAACTTCAGTGGTCCTTCAGCCCAGAGAAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425682.1
CDS CCA 72 bp ACACGGGTTCATCTGCAGCAAATGTCACACATTCTTTaGCACTATCTATGTTTTCAAATTCCACTAGAGCCT +
Preference number: 6 (lower is better)
Translates to: TRVHLQQMSHIL*HYLCFQIPLEP
Trigger: AGGCTCTAGTGGAATTTGAAAACATAGATAGTGCCAAAGAATGTGTGACATTTGCTGCAGATGAACCCGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000425682.1
ENST00000449105.8
ENST00000608859.5
CDS CAA 72 bp TACACGGGTTCATCTGCAGCAAATGTCACACATTCTTaGGCACTATCTATGTTTTCAAATTCCACTAGAGCC +
Preference number: 6 (lower is better)
Translates to: YTGSSAANVTHS*ALSMFSNSTRA
Trigger: GGCTCTAGTGGAATTTGAAAACATAGATAGTGCCAAAGAATGTGTGACATTTGCTGCAGATGAACCCGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000425682.1
ENST00000449105.8
ENST00000608859.5
CDS CAA 72 bp AAGGTATTTCTTCTCTGGGCTGAAGGACCACTGAAGTaGTGCAAAACCCTTTTCGGTTACAATGAATTACCA +
Preference number: 6 (lower is better)
Translates to: KVFLLWAEGPLK*CKTLFGYNELP
Trigger: TGGTAATTCATTGTAACCGAAAAGGGTTTTGCACAACTTCAGTGGTCCTTCAGCCCAGAGAAGAAATACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425682.1
CDS TCA 72 bp ACCACTGAAGTTGTGCAAAACCCTTTTCGGTTACAATaGATTACCAAACATGTGAACGAAGAAGCACAAGAC +
Preference number: 6 (lower is better)
Translates to: TTEVVQNPFRLQ*ITKHVNEEAQD
Trigger: GTCTTGTGCTTCTTCGTTCACATGTTTGGTAATTCATTGTAACCGAAAAGGGTTTTGCACAACTTCAGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425682.1
CDS CCA 72 bp TATATATCAGCTCCATTGAGTGCTGCTTTAGCTTTCTaGGCACAAAGGACTGATTCAAACATAAGCATTGCT +
Preference number: 6 (lower is better)
Translates to: YISAPLSAALAF*AQRTDSNISIA
Trigger: AGCAATGCTTATGTTTGAATCAGTCCTTTGTGCCCAGAAAGCTAAAGCAGCACTCAATGGAGCTGATATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358367.8
ENST00000608859.5
CDS CAA 72 bp TTTAGACGAGTTGGCATTGCTTGTATCCCATTTCTCTaGAATATAACAATACGTTGCACTTTGCCAACAGGG +
Preference number: 6 (lower is better)
Translates to: FRRVGIACIPFL*NITIRCTLPTG
Trigger: CCCTGTTGGCAAAGTGCAACGTATTGTTATATTCAAGAGAAATGGGATACAAGCAATGCCAACTCGTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378915.7
CDS CAA 90 bp CAAAGGACTGATTCAAACTCAACCATTGCTTGTATCCCATTTCTCTaGAATATAACAATACGTTGCACTTTGCCAACAGGGTTGCATACA +
Preference number: 6 (lower is better)
Translates to: QRTDSNSTIACIPFL*NITIRCTLPTGLHT
Trigger: TGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGTTATATTCAAGAGAAATGGGATACAAGCAATGGTTGAGTTTGAATCAGTCCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272249.7
ENST00000409636.5
ENST00000410076.5
ENST00000449105.8
ENST00000488099.1
CDS CAA 90 bp TATTCAATTTTTAGTGTGCAACATCCAGCATATATATCAGCTCCATaGAGTGCTGCTTTAGCTTTCTGGGCACAAAGGACTGATTCAAAC +
Preference number: 6 (lower is better)
Translates to: YSIFSVQHPAYISAP*SAALAFWAQRTDSN
Trigger: GTTTGAATCAGTCCTTTGTGCCCAGAAAGCTAAAGCAGCACTCAATGGAGCTGATATATATGCTGGATGTTGCACACTAAAAATTGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000409636.5
ENST00000410076.5
ENST00000449105.8
ENST00000488099.1
ENST00000608859.5
CDS CAA 90 bp CAAAGGACTGATTCAAACATAAGCATTGCTTGTATCCCATTTCTCTaGAATATAACAATACGTTGCACTTTGCCAACAGGGTTGCATACA +
Preference number: 6 (lower is better)
Translates to: QRTDSNISIACIPFL*NITIRCTLPTGLHT
Trigger: TGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGTTATATTCAAGAGAAATGGGATACAAGCAATGCTTATGTTTGAATCAGTCCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358367.8
ENST00000608859.5
CDS CAA 90 bp CTAATAACATTTAGACGAGTTGGCATTGCTTGTATCCCATTTCTCTaGAATATAACAATACGTTGCACTTTGCCAACAGGGTTGCATACA +
Preference number: 6 (lower is better)
Translates to: LITFRRVGIACIPFL*NITIRCTLPTGLHT
Trigger: TGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGTTATATTCAAGAGAAATGGGATACAAGCAATGCCAACTCGTCTAAATGTTATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378915.7
CDS CCA 72 bp CATACTATTAGCTTCAACAGCAACACATTTTCAAAGTaGGCTTCTTTCAAGAAGTTTCAGCATAAGCCAACA +
Preference number: 6 (lower is better)
Translates to: HTISFNSNTFSK*ASFKKFQHKPT
Trigger: TGTTGGCTTATGCTGAAACTTCTTGAAAGAAGCCCACTTTGAAAATGTGTTGCTGTTGAAGCTAATAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272249.7
CDS CAA 72 bp GATTCAAACATAAGCATTGCTTGTATCCCATTTCTCTaGAATATAACAATACGTTGCACTTTGCCAACAGGG +
Preference number: 6 (lower is better)
Translates to: DSNISIACIPFL*NITIRCTLPTG
Trigger: CCCTGTTGGCAAAGTGCAACGTATTGTTATATTCAAGAGAAATGGGATACAAGCAATGCTTATGTTTGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358367.8
ENST00000608859.5
CDS CAA 90 bp CTAATAACATTTAGACGATCAACCATTGCTTGTATCCCATTTCTCTaGAATATAACAATACGTTGCACTTTGCCAACAGGGTTGCATACA +
Preference number: 6 (lower is better)
Translates to: LITFRRSTIACIPFL*NITIRCTLPTGLHT
Trigger: TGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGTTATATTCAAGAGAAATGGGATACAAGCAATGGTTGATCGTCTAAATGTTATTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409328.5
CDS GCA 72 bp GCTTGTATCCCATTTCTCTTGAATATAACAATACGTTaGACTTTGCCAACAGGGTTGCATACAGTATATAAA +
Preference number: 6 (lower is better)
Translates to: ACIPFLLNITIR*TLPTGLHTVYK
Trigger: TTTATATACTGTATGCAACCCTGTTGGCAAAGTGCAACGTATTGTTATATTCAAGAGAAATGGGATACAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000272249.7
ENST00000358367.8
ENST00000378915.7
ENST00000409328.5
ENST00000409636.5
ENST00000410076.5
ENST00000425682.1
ENST00000449105.8
ENST00000488099.1
ENST00000608859.5