Pregenerated sensors for HNRNPH3 (Homo sapiens)
Ensembl gene IDs: ENSG00000096746Ensembl transcript IDs: ENST00000265866.12, ENST00000354695.5, ENST00000461310.5, ENST00000467249.1, ENST00000469172.5, ENST00000478698.1, ENST00000480987.5, ENST00000481819.5, ENST00000486854.5, ENST00000490442.5, ENST00000491200.5
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACATCAACCCAAATCTTATaGAGGCAGCACATCTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: PKSRARIQLPTLSYPGNTSTQIL*RQHIFR Trigger: CCTAAAGATGTGCTGCCTTCATAAGATTTGGGTTGA...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR TCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAAACCGTCTCCAGCGGTaGCAACCGCTTAGGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTNRLQR*QPLREL Trigger: CAGCTCCCTAAGCGGTTGTCACCGCTGGAGACGGTT...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACATTCCAGAACCTCCCATaGCAGAGCCGCCTCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTFQNLP*QSRLQE Trigger: CTCCTGGAGGCGGCTCTGGCATGGGAGGTTCTGGAA...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACATTACGCCGACTCTGGTaGTCGCGGGGTCCAGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTLRRLW*SRGPVQ Trigger: TTGAACTGGACCCCGCGAGCACCAGAGTCGGCGTAA...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAATCCACCTCCACTCATaGCGCCTTGCCCATAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTIHLHS*RLAHSN Trigger: GTTACTATGGGCAAGGCGGCATGAGTGGAGGTGGAT...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACACACAAACTCTACATCTaGTTCTCCTGTGGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTHKLYI*FSCGSA Trigger: GGCAGAGCCACAGGAGAAGCAGATGTAGAGTTTGTG...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR CCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACATATTGGTCTATCATATaGTCCCGGTCGCTGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTYWSII*SRSLSQ Trigger: CTGGGACAGCGACCGGGACCATATGATAGACCAATA...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR CCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACACCCTCTTCCTCCTATTaGTCTATCATATGGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTPSSSY*SIIWSR Trigger: CCGGGACCATATGATAGACCAATAGGAGGAAGAGGG...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR TCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACATCCCATTCTTCCAACTaGTCCATAGCCTCCCTGATT | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTSHSSN*SIASLI Trigger: AATCAGGGAGGCTATGGATCAGTTGGAAGAATGGGA...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACACTTCTCCTGTGGCTCTaGCATCAGCTCCAATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTLLLWL*HQLQYQ Trigger: TTGATATTGGAGCTGATGGCAGAGCCACAGGAGAAG...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR TCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACACATCTCAATACCGTTTaGTTTAAATGCCTGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTHLNTV*FKCLSG Trigger: GCCTGACAGGCATTTAAATCAAACGGTATTGAGATG...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR TCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAATTTCGGTCAAGTGCTaGAGGGGTTTTACTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTISVKC*RGFTPK Trigger: TTTTGGAGTAAAACCCCTTCAGCACTTGACCGAAAT...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACACTATTTCCTCTTTGCTaGAACCAAATGGTAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTLFPLC*NQMVVH Trigger: GTGGACTACCATTTGGTTGCAGCAAAGAGGAAATAG...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAAGACATGGCAGCTACTaGATCTTCATGTGTCACAAA | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTRHGSY*IFMCHK Trigger: TTTGTGACACATGAAGATGCAGTAGCTGCCATGTCT...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAGAACTATTTCCTCTTTaGTGCAACCAAATGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTELFPL*CNQMVV Trigger: GACTACCATTTGGTTGCAGCAAAGAGGAAATAGTTC...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR TCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAGATCATAAAATCCTTTaGTTTCACTCCTGCTACTTC | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTDHKIL*FHSCYF Trigger: GAAGTAGCAGGAGTGAAATCAAAGGATTTTATGATC...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACATACTCTAAGACATCTTaGGATAACCTGCAACTATCA | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTYSKTS*DNLQLS Trigger: TGATAGTTGCAGGTTATCGCAAGATGTCTTAGAGTA...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR CCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACATCCCAGCAATCTTCTTaGTGGATCATAAAATCCTTT | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTSQQSS*WIIKSF Trigger: AAAGGATTTTATGATCCACCAAGAAGATTGCTGGGA...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR CCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACATTTTGGAGACATTTTTaGTATTTCGGTCAAGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTFWRHF*YFGQVL Trigger: CAGCACTTGACCGAAATACCAAAAATGTCTCCAAAA...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR GCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAGATACAAAACCCAACTaGAGGATTGTTTTTATTGAC | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTDTKPN*RIVFID Trigger: GTCAATAAAAACAATCCTGCAGTTGGGTTTTGTATC...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR CCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAATCACTAGCGTCATTTaGACCATTATGTTTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTITSVI*TIMFHN Trigger: GTTATGAAACATAATGGTCCAAATGACGCTAGTGAT...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR CCA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACACAGCAATCTTCTTGGTaGATCATAAAATCCTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PKSRARIQLPTLSYPGNTQQSSW*IIKSFD Trigger: ATCAAAGGATTTTATGATCCACCAAGAAGATTGCTG...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS GCA 90 bp | TCGGCTCTCGGGCTGGGTGTCCGCCTCCTTCCCCTGGCCCAGAGTTaGTGGCCGCCCGCCAGCGCGCTTCGTCCCAATGTGCCGCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: SALGLGVRLLPLAQS*WPPASALRPNVPRG Trigger: CCCGCGCGGCACATTGGGACGAAGCGCGCTGGCGGGCGGCCAGCAACTCTGGGCCAGGGGAAGGAGGCGGACACCCAGCCCGAGAGCCGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 90 bp | AGGCGGCCGGCCCCACTCTCGCGAGACGGGAAAGTCGGTTTCGCATaGCGCTGGCGGCACGCAGCGCGCCTGCGCGGTGGTGGGTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: RRPAPLSRDGKVGFA*RWRHAARLRGGGLR Trigger: GCGCAACCCACCACCGCGCAGGCGCGCTGCGTGCCGCCAGCGCCATGCGAAACCGACTTTCCCGTCTCGCGAGAGTGGGGCCGGCCGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 90 bp | GCTCTCGGGCTGGGTGTCCGCCTCCTTCCCCTGGCCCAGAGTTGCTaGCCGCCCGCCAGCGCGCTTCGTCCCAATGTGCCGCGCGGGATC | + |
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Preference number: 5 (lower is better) Translates to: ALGLGVRLLPLAQSC*PPASALRPNVPRGI Trigger: GATCCCGCGCGGCACATTGGGACGAAGCGCGCTGGCGGGCGGCCAGCAACTCTGGGCCAGGGGAAGGAGGCGGACACCCAGCCCGAGAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 90 bp | CCGGCCCCACTCTCGCGAGACGGGAAAGTCGGTTTCGCATGGCGCTaGCGGCACGCAGCGCGCCTGCGCGGTGGTGGGTTGCGCAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PAPLSRDGKVGFAWR*RHAARLRGGGLRSC Trigger: ACAGCTGCGCAACCCACCACCGCGCAGGCGCGCTGCGTGCCGCCAGCGCCATGCGAAACCGACTTTCCCGTCTCGCGAGAGTGGGGCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS GCA 90 bp | TCGCATGGCGCTGGCGGCACGCAGCGCGCCTGCGCGGTGGTGGGTTaGGCAGCTGTTGGGGGCGAGGTAGACCGAGCAGAGGCTGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SHGAGGTQRACAVVG*AAVGGEVDRAEAVP Trigger: TGGAACAGCCTCTGCTCGGTCTACCTCGCCCCCAACAGCTGCGCAACCCACCACCGCGCAGGCGCGCTGCGTGCCGCCAGCGCCATGCGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 90 bp | CGCGAAGATGAAAGCGTCCACTGGGGCCGATTTCGGCTCTCGGGCTaGGTGTCCGCCTCCTTCCCCTGGCCCAGAGTTGCTGGCCGCCCG | + |
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Preference number: 5 (lower is better) Translates to: REDESVHWGRFRLSG*VSASFPWPRVAGRP Trigger: CGGGCGGCCAGCAACTCTGGGCCAGGGGAAGGAGGCGGACACCCAGCCCGAGAGCCGAAATCGGCCCCAGTGGACGCTTTCATCTTCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS GCA 90 bp | TGGCCCAGAGTTGCTGGCCGCCCGCCAGCGCGCTTCGTCCCAATGTaGCGCGCGGGATCCGGGTTTCTTGGGTGTATTCATGTCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: WPRVAGRPPARFVPM*RAGSGFLGCIHVHH Trigger: GTGGTGGACATGAATACACCCAAGAAACCCGGATCCCGCGCGGCACATTGGGACGAAGCGCGCTGGCGGGCGGCCAGCAACTCTGGGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS TCA 90 bp | TGCCGTAGCGCTCTGGAGAAGTTCTCCGGTGATCTGCCCCCACCGTaGACAAATTCTGTGAGGGCCCCGCCCTGGCTAGGCATCGACGGC | + |
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Preference number: 5 (lower is better) Translates to: CRSALEKFSGDLPPP*TNSVRAPPWLGIDG Trigger: GCCGTCGATGCCTAGCCAGGGCGGGGCCCTCACAGAATTTGTTCACGGTGGGGGCAGATCACCGGAGAACTTCTCCAGAGCGCTACGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS TCA 90 bp | TCGTGTAGCGCTCGCCACAACGGTTCTCCCAACCGTCTCCAGCGGTaGCAACCGCTTAGGGAGCTGCGCAGCACAGCTACTGGCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SCSARHNGSPNRLQR*QPLRELRSTATGLG Trigger: CCCCAAGCCAGTAGCTGTGCTGCGCAGCTCCCTAAGCGGTTGTCACCGCTGGAGACGGTTGGGAGAACCGTTGTGGCGAGCGCTACACGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 90 bp | GCCAGCGCGCTTCGTCCCAATGTGCCGCGCGGGATCCGGGTTTCTTaGGTGTATTCATGTCCACCACGTTACCGTTCTCTCTGCAAATCC | + |
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Preference number: 5 (lower is better) Translates to: ASALRPNVPRGIRVS*VYSCPPRYRSLCKS Trigger: GGATTTGCAGAGAGAACGGTAACGTGGTGGACATGAATACACCCAAGAAACCCGGATCCCGCGCGGCACATTGGGACGAAGCGCGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS TCA 90 bp | TTGCATTGTGCGGTGAAAAATAGGAGTGTTTCTGGGCCGCGAAGATaGAAGCGTCCACTGGGGCCGATTTCGGCTCTCGGGCTGGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: LHCAVKNRSVSGPRR*KRPLGPISALGLGV Trigger: GACACCCAGCCCGAGAGCCGAAATCGGCCCCAGTGGACGCTTTCATCTTCGCGGCCCAGAAACACTCCTATTTTTCACCGCACAATGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 90 bp | ATGGCAGTTCTGCCAGTGTGTAGAAGGAACCGTGCCGTAGCGCTCTaGAGAAGTTCTCCGGTGATCTGCCCCCACCGTGAACAAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: MAVLPVCRRNRAVAL*RSSPVICPHREQIL Trigger: CAGAATTTGTTCACGGTGGGGGCAGATCACCGGAGAACTTCTCCAGAGCGCTACGGCACGGTTCCTTCTACACACTGGCAGAACTGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS-3UTR CAA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAGAAGGGAGAAGTCGTTaGCCTCGTGTAGCGCTCGCC | + |
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Preference number: 5 (lower is better) Translates to: PKSRARIQLPTLSYPGNTEGRSR*PRVALA Trigger: GGCGAGCGCTACACGAGGCAAACGACTTCTCCCTTC...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS GCA 90 bp | CGGGTTTCTTGGGTGTATTCATGTCCACCACGTTACCGTTCTCTCTaGAAATCCTTCCTCTTTTTCTCCTCTGGCCTTCGCGTTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: RVSWVYSCPPRYRSL*KSFLFFSSGLRVFI Trigger: GATGAAAACGCGAAGGCCAGAGGAGAAAAAGAGGAAGGATTTGCAGAGAGAACGGTAACGTGGTGGACATGAATACACCCAAGAAACCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 90 bp | CCCAGCTCCATAATAACCCCCTCTTCCTCCTATTGGTCTATCATATaGTCCCGGTCGCTGTCCCAGCAATCTTCTTGGTGGATCATAAAA | + |
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Preference number: 5 (lower is better) Translates to: PSSIITPSSSYWSII*SRSLSQQSSWWIIK Trigger: TTTTATGATCCACCAAGAAGATTGCTGGGACAGCGACCGGGACCATATGATAGACCAATAGGAGGAAGAGGGGGTTATTATGGAGCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000265866.12 ENST00000354695.5 ENST00000461310.5 ENST00000467249.1 ENST00000469172.5 ENST00000480987.5 ENST00000481819.5 ENST00000486854.5 ENST00000490442.5 ENST00000491200.5 |
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| CDS-3UTR CAA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACACCCCTCTTCCTCCTATaGGTCTATCATATGGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: PKSRARIQLPTLSYPGNTPLFLL*VYHMVP Trigger: CGGGACCATATGATAGACCAATAGGAGGAAGAGGGG...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS CCA 90 bp | TGGTCTATCATATGGTCCCGGTCGCTGTCCCAGCAATCTTCTTGGTaGATCATAAAATCCTTTGATTTCACTCCTGCTACTTCTGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: WSIIWSRSLSQQSSW*IIKSFDFTPATSED Trigger: ATCTTCAGAAGTAGCAGGAGTGAAATCAAAGGATTTTATGATCCACCAAGAAGATTGCTGGGACAGCGACCGGGACCATATGATAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000265866.12 ENST00000354695.5 ENST00000461310.5 ENST00000467249.1 ENST00000469172.5 ENST00000480987.5 ENST00000481819.5 ENST00000486854.5 ENST00000490442.5 ENST00000491200.5 |
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| CDS-3UTR CAA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAGTCCCAGCAATCTTCTaGGTGGATCATAAAATCCTT | + |
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Preference number: 5 (lower is better) Translates to: PKSRARIQLPTLSYPGNTVPAIF*VDHKIL Trigger: AAGGATTTTATGATCCACCAAGAAGATTGCTGGGAC...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS-3UTR CAA 90 bp | CCAAAATCTAGGGCTAGAATTCAGCTTCCAACACTCTCATACCCAGGTAACACAGCAGGATTGTTTTTATaGACTATGACATGGACTTGT | + |
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Preference number: 5 (lower is better) Translates to: PKSRARIQLPTLSYPGNTAGLFL*TMTWTC Trigger: ACAAGTCCATGTCATAGTCAATAAAAACAATCCTGC...TGTGTTACCTGGGTATGAGAGTGTTGGAAGCTGAATTCTAGCCCTAGATTTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265866.12 |
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| CDS GCA 90 bp | ACAGAAAGCCATTATAGAGGTCAAATGGTTTTAAATCCCAACAACTaGCAAGCGTTACCTACAGATCTTAGAGCCTCTTATTTTATAAAT | + |
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Preference number: 5 (lower is better) Translates to: TESHYRGQMVLNPNN*QALPTDLRASYFIN Trigger: ATTTATAAAATAAGAGGCTCTAAGATCTGTAGGTAACGCTTGGCAGTTGTTGGGATTTAAAACCATTTGACCTCTATAATGGCTTTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000478698.1 ENST00000490442.5 |
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| CDS GCA 72 bp | GCTGGCGGCACGCAGCGCGCCTGCGCGGTGGTGGGTTaGGCAGCTGTTGGGGGCGAGGTAGACCGAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: AGGTQRACAVVG*AAVGGEVDRAE Trigger: CTCTGCTCGGTCTACCTCGCCCCCAACAGCTGCGCAACCCACCACCGCGCAGGCGCGCTGCGTGCCGCCAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS GCA 72 bp | TCGGTTTCGCATGGCGCTGGCGGCACGCAGCGCGCCTaGGCGGTGGTGGGTTGCGCAGCTGTTGGGGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: SVSHGAGGTQRA*AVVGCAAVGGE Trigger: CTCGCCCCCAACAGCTGCGCAACCCACCACCGCGCAGGCGCGCTGCGTGCCGCCAGCGCCATGCGAAACCGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CAA 90 bp | TTCGGCTCTCGGGCTGGGTGTCCGCCTCCTTCCCCTGGCCCAGAGTaGCTGGCCGCCCGCCAGCGCGCTTCGTCCCAATGTGCCGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: FGSRAGCPPPSPGPE*LAARQRASSQCAAR Trigger: CCGCGCGGCACATTGGGACGAAGCGCGCTGGCGGGCGGCCAGCAACTCTGGGCCAGGGGAAGGAGGCGGACACCCAGCCCGAGAGCCGAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS GCA 72 bp | GGGCTGGGTGTCCGCCTCCTTCCCCTGGCCCAGAGTTaGTGGCCGCCCGCCAGCGCGCTTCGTCCCAATGTG | + |
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Preference number: 6 (lower is better) Translates to: GLGVRLLPLAQS*WPPASALRPNV Trigger: CACATTGGGACGAAGCGCGCTGGCGGGCGGCCAGCAACTCTGGGCCAGGGGAAGGAGGCGGACACCCAGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 72 bp | CTGGGTGTCCGCCTCCTTCCCCTGGCCCAGAGTTGCTaGCCGCCCGCCAGCGCGCTTCGTCCCAATGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: LGVRLLPLAQSC*PPASALRPNVP Trigger: CGGCACATTGGGACGAAGCGCGCTGGCGGGCGGCCAGCAACTCTGGGCCAGGGGAAGGAGGCGGACACCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 72 bp | GCCCCACTCTCGCGAGACGGGAAAGTCGGTTTCGCATaGCGCTGGCGGCACGCAGCGCGCCTGCGCGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: APLSRDGKVGFA*RWRHAARLRGG Trigger: ACCACCGCGCAGGCGCGCTGCGTGCCGCCAGCGCCATGCGAAACCGACTTTCCCGTCTCGCGAGAGTGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CAA 72 bp | CGGGCTGGGTGTCCGCCTCCTTCCCCTGGCCCAGAGTaGCTGGCCGCCCGCCAGCGCGCTTCGTCCCAATGT | + |
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Preference number: 6 (lower is better) Translates to: RAGCPPPSPGPE*LAARQRASSQC Trigger: ACATTGGGACGAAGCGCGCTGGCGGGCGGCCAGCAACTCTGGGCCAGGGGAAGGAGGCGGACACCCAGCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 72 bp | GCAGCGCGCCTGCGCGGTGGTGGGTTGCGCAGCTGTTaGGGGCGAGGTAGACCGAGCAGAGGCTGTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: AARLRGGGLRSC*GRGRPSRGCSS Trigger: ACTGGAACAGCCTCTGCTCGGTCTACCTCGCCCCCAACAGCTGCGCAACCCACCACCGCGCAGGCGCGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS GCA 72 bp | GTTGCTGGCCGCCCGCCAGCGCGCTTCGTCCCAATGTaGCGCGCGGGATCCGGGTTTCTTGGGTGTATTCAT | + |
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Preference number: 6 (lower is better) Translates to: VAGRPPARFVPM*RAGSGFLGCIH Trigger: ATGAATACACCCAAGAAACCCGGATCCCGCGCGGCACATTGGGACGAAGCGCGCTGGCGGGCGGCCAGCAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 72 bp | GGAGTGTTTCTGGGCCGCGAAGATGAAAGCGTCCACTaGGGCCGATTTCGGCTCTCGGGCTGGGTGTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: GVFLGREDESVH*GRFRLSGWVSA Trigger: GGCGGACACCCAGCCCGAGAGCCGAAATCGGCCCCAGTGGACGCTTTCATCTTCGCGGCCCAGAAACACTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS TCA 72 bp | GCTCGCCACAACGGTTCTCCCAACCGTCTCCAGCGGTaGCAACCGCTTAGGGAGCTGCGCAGCACAGCTACT | + |
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Preference number: 6 (lower is better) Translates to: ARHNGSPNRLQR*QPLRELRSTAT Trigger: AGTAGCTGTGCTGCGCAGCTCCCTAAGCGGTTGTCACCGCTGGAGACGGTTGGGAGAACCGTTGTGGCGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265866.12 ENST00000469172.5 |
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| CDS CCA 72 bp | AGAGCGTACCATTCTGCCGCCTCGGGGCGATGGCAATaGCAGTTCTGCCAGTGTGTAGAAGGAACCGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RAYHSAASGRWQ*QFCQCVEGTVP Trigger: CGGCACGGTTCCTTCTACACACTGGCAGAACTGCCATTGCCATCGCCCCGAGGCGGCAGAATGGTACGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461310.5 ENST00000469172.5 |
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| CDS CAA 90 bp | GACTCTGGTGCTCGCGGGGTCCAGTTCAAAGAAGGGAGAAGTCGTTaGCCTCGTGTAGCGCTCGCCACAACGGTTCTCCCAACCGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: DSGARGVQFKEGRSR*PRVALATTVLPTVS Trigger: GGAGACGGTTGGGAGAACCGTTGTGGCGAGCGCTACACGAGGCAAACGACTTCTCCCTTCTTTGAACTGGACCCCGCGAGCACCAGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000265866.12 ENST00000469172.5 ENST00000480987.5 ENST00000486854.5 |
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| CDS CCA 72 bp | CTGCCAGTGTGTAGAAGGAACCGTGCCGTAGCGCTCTaGAGAAGTTCTCCGGTGATCTGCCCCCACCGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LPVCRRNRAVAL*RSSPVICPHRE Trigger: TTCACGGTGGGGGCAGATCACCGGAGAACTTCTCCAGAGCGCTACGGCACGGTTCCTTCTACACACTGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CAA 72 bp | GCTCGCGGGGTCCAGTTCAAAGAAGGGAGAAGTCGTTaGCCTCGTGTAGCGCTCGCCACAACGGTTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ARGVQFKEGRSR*PRVALATTVLP Trigger: TGGGAGAACCGTTGTGGCGAGCGCTACACGAGGCAAACGACTTCTCCCTTCTTTGAACTGGACCCCGCGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000265866.12 ENST00000469172.5 ENST00000480987.5 ENST00000486854.5 |
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| CDS CAA 90 bp | CGCCAGCGCGCTTCGTCCCAATGTGCCGCGCGGGATCCGGGTTTCTaGGGTGTATTCATGTCCACCACGTTACCGTTCTCTCTGCAAATC | + |
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Preference number: 6 (lower is better) Translates to: RQRASSQCAARDPGF*GVFMSTTLPFSLQI Trigger: GATTTGCAGAGAGAACGGTAACGTGGTGGACATGAATACACCCAAGAAACCCGGATCCCGCGCGGCACATTGGGACGAAGCGCGCTGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS TCA 72 bp | GCGGTGAAAAATAGGAGTGTTTCTGGGCCGCGAAGATaGAAGCGTCCACTGGGGCCGATTTCGGCTCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: AVKNRSVSGPRR*KRPLGPISALG Trigger: CCCGAGAGCCGAAATCGGCCCCAGTGGACGCTTTCATCTTCGCGGCCCAGAAACACTCCTATTTTTCACCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 72 bp | GTTTTCAGAGCGTACCATTCTGCCGCCTCGGGGCGATaGCAATGGCAGTTCTGCCAGTGTGTAGAAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: VFRAYHSAASGR*QWQFCQCVEGT Trigger: GGTTCCTTCTACACACTGGCAGAACTGCCATTGCCATCGCCCCGAGGCGGCAGAATGGTACGCTCTGAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461310.5 ENST00000469172.5 |
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| CDS CCA 72 bp | CTTCGTCCCAATGTGCCGCGCGGGATCCGGGTTTCTTaGGTGTATTCATGTCCACCACGTTACCGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LRPNVPRGIRVS*VYSCPPRYRSL Trigger: GAGAGAACGGTAACGTGGTGGACATGAATACACCCAAGAAACCCGGATCCCGCGCGGCACATTGGGACGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CAA 72 bp | GCTTCGTCCCAATGTGCCGCGCGGGATCCGGGTTTCTaGGGTGTATTCATGTCCACCACGTTACCGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ASSQCAARDPGF*GVFMSTTLPFS Trigger: AGAGAACGGTAACGTGGTGGACATGAATACACCCAAGAAACCCGGATCCCGCGCGGCACATTGGGACGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS GCA 72 bp | ACGTTAGAACCATCCAGTTTTCAGAGCGTACCATTCTaGCGCCTCGGGGCGATGGCAATGGCAGTTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TLEPSSFQSVPF*RLGAMAMAVLP Trigger: TGGCAGAACTGCCATTGCCATCGCCCCGAGGCGGCAGAATGGTACGCTCTGAAAACTGGATGGTTCTAACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461310.5 ENST00000469172.5 |
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| CDS CAA 90 bp | GCAGAGGCTGTTCCAGTTAAAGAGCTGCAGCGCGCACCGTTTTTCTaGCTTACGTTAGAACCATCCAGTTTTCAGAGCGTACCATTCTGC | + |
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Preference number: 6 (lower is better) Translates to: AEAVPVKELQRAPFF*LTLEPSSFQSVPFC Trigger: GCAGAATGGTACGCTCTGAAAACTGGATGGTTCTAACGTAAGCAAGAAAAACGGTGCGCGCTGCAGCTCTTTAACTGGAACAGCCTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 72 bp | ATAATAACCCCCTCTTCCTCCTATTGGTCTATCATATaGTCCCGGTCGCTGTCCCAGCAATCTTCTTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: IITPSSSYWSII*SRSLSQQSSWW Trigger: CCACCAAGAAGATTGCTGGGACAGCGACCGGGACCATATGATAGACCAATAGGAGGAAGAGGGGGTTATTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000265866.12 ENST00000354695.5 ENST00000461310.5 ENST00000467249.1 ENST00000469172.5 ENST00000480987.5 ENST00000481819.5 ENST00000486854.5 ENST00000490442.5 ENST00000491200.5 |
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| CDS TCA 72 bp | GCGGATTTTCTGGTCCACCATGTTTGCATTGTGCGGTaGAAAATAGGAGTGTTTCTGGGCCGCGAAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: ADFLVHHVCIVR*KIGVFLGREDE Trigger: TTCATCTTCGCGGCCCAGAAACACTCCTATTTTTCACCGCACAATGCAAACATGGTGGACCAGAAAATCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CAA 72 bp | GTTCCAGTTAAAGAGCTGCAGCGCGCACCGTTTTTCTaGCTTACGTTAGAACCATCCAGTTTTCAGAGCGTA | + |
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Preference number: 6 (lower is better) Translates to: VPVKELQRAPFF*LTLEPSSFQSV Trigger: TACGCTCTGAAAACTGGATGGTTCTAACGTAAGCAAGAAAAACGGTGCGCGCTGCAGCTCTTTAACTGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469172.5 |
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| CDS CCA 72 bp | ATATGGTCCCGGTCGCTGTCCCAGCAATCTTCTTGGTaGATCATAAAATCCTTTGATTTCACTCCTGCTACT | + |
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Preference number: 6 (lower is better) Translates to: IWSRSLSQQSSW*IIKSFDFTPAT Trigger: AGTAGCAGGAGTGAAATCAAAGGATTTTATGATCCACCAAGAAGATTGCTGGGACAGCGACCGGGACCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000265866.12 ENST00000354695.5 ENST00000461310.5 ENST00000467249.1 ENST00000469172.5 ENST00000480987.5 ENST00000481819.5 ENST00000486854.5 ENST00000490442.5 ENST00000491200.5 |
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| CDS CCA 72 bp | ATCATATGGTCCCGGTCGCTGTCCCAGCAATCTTCTTaGTGGATCATAAAATCCTTTGATTTCACTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: IIWSRSLSQQSS*WIIKSFDFTPA Trigger: AGCAGGAGTGAAATCAAAGGATTTTATGATCCACCAAGAAGATTGCTGGGACAGCGACCGGGACCATATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000265866.12 ENST00000354695.5 ENST00000461310.5 ENST00000467249.1 ENST00000469172.5 ENST00000480987.5 ENST00000481819.5 ENST00000486854.5 ENST00000490442.5 ENST00000491200.5 |
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| CDS TCA 72 bp | TTCTACTACCAGAGTCTTCAAACTATTTGTGTCCCCTaGATGCCAACTCTAGCCTTTCCTTATCTCTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: FYYQSLQTICVP*MPTLAFPYLSN Trigger: ATTTGAGAGATAAGGAAAGGCTAGAGTTGGCATTCAGGGGACACAAATAGTTTGAAGACTCTGGTAGTAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481819.5 |
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| CDS GCA 72 bp | CATTATAGAGGTCAAATGGTTTTAAATCCCAACAACTaGCAAGCGTTACCTACAGATCTTAGAGCCTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: HYRGQMVLNPNN*QALPTDLRASY Trigger: ATAAGAGGCTCTAAGATCTGTAGGTAACGCTTGGCAGTTGTTGGGATTTAAAACCATTTGACCTCTATAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000478698.1 ENST00000490442.5 |
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| CDS CAA 90 bp | TTTAAGAAAACTTGCATAATTCTACTACCAGAGTCTTCAAACTATTaGTGTCCCCTGAATGCCAACTCTAGCCTTTCCTTATCTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FKKTCIILLPESSNY*CPLNANSSLSLSLK Trigger: TTTGAGAGATAAGGAAAGGCTAGAGTTGGCATTCAGGGGACACAAATAGTTTGAAGACTCTGGTAGTAGAATTATGCAAGTTTTCTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481819.5 |
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