Pregenerated sensors for HNRNPD (Homo sapiens)
Ensembl gene IDs: ENSG00000138668Ensembl transcript IDs: ENST00000313899.12, ENST00000352301.8, ENST00000353341.8, ENST00000503822.1, ENST00000507010.5, ENST00000508119.5, ENST00000513584.1, ENST00000514325.1, ENST00000514671.5, ENST00000515432.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTGGAAAATACTGCTTCACCACCAAACGGCAGCATTCGAGAGCGTaGGCATCTCGTACCCTGTCCGCATTGAGCGGGCCTGTGAGAATC | + |
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Preference number: 1 (lower is better) Translates to: IGKYCFTTKRQHSRA*ASRTLSALSGPVRI Trigger: GATTCTCACAGGCCCGCTCAATGCGGACAGGGTACGAGATGCTCACGCTCTCGAATGCTGCCGTTTGGTGGTGAAGCAGTATTTTCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| 3UTR-3UTR GCA 90 bp | CCCTCAACACTTGAATTCATCTATGAAGTCCACCACAGCTCTAAAAATCTCTCTGCAAAGGGGTACTTTTaGACATTTATCCAGATTTGT | + |
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Preference number: 2 (lower is better) Translates to: PSTLEFIYEVHHSSKNLSAKGYF*TFIQIC Trigger: ACAAATCTGGATAAATGTGCAAAAGTACCCCTTTGC...AGAGAGATTTTTAGAGCTGTGGTGGACTTCATAGATGAATTCAAGTGTTGAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| 3UTR-3UTR CCA 90 bp | TATTTTGCTTTGCAGGTCTCTGTCCTAACTACTAAACTCTACCACTGTAACACAAAGTCATTCCCAATTTaGACAGGGAGGACACATTAT | + |
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Preference number: 2 (lower is better) Translates to: YFALQVSVLTTKLYHCNTKSFPI*TGRTHY Trigger: ATAATGTGTCCTCCCTGTCCAAATTGGGAATGACTT...TGTGTTACAGTGGTAGAGTTTAGTAGTTAGGACAGAGACCTGCAAAGCAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTTGCAATCTTATAAAAACAGGACACAGGTCCTCAATTTGGATCTATCATAACATTAACTATCTGTaGAAAGGGGTACTTTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LGCNLIKTGHRSSIWIYHNINYL*KGVLLH Trigger: GTGCAAAAGTACCCCTTTGCACAGATAGTTAATGTT...ATGATAGATCCAAATTGAGGACCTGTGTCCTGTTTTTATAAGATTGCAACCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| 3UTR CAA 90 bp | ACACACATAAACACGGTATATATTTCTTTAATCCTCCCTCAACACTaGAATTCATCTATGAAGTCCACCACAGCTCTAAAAATCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: THINTVYISLILPQH*NSSMKSTTALKISL Trigger: CAGAGAGATTTTTAGAGCTGTGGTGGACTTCATAGATGAATTCAAGTGTTGAGGGAGGATTAAAGAAATATATACCGTGTTTATGTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| 3UTR TCA 72 bp | TACTGCTTCACCACCAAACGGCAGCATTCGAGAGCGTaGGCATCTCGTACCCTGTCCGCATTGAGCGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: YCFTTKRQHSRA*ASRTLSALSGP Trigger: AGGCCCGCTCAATGCGGACAGGGTACGAGATGCTCACGCTCTCGAATGCTGCCGTTTGGTGGTGAAGCAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| 3UTR-3UTR CAA 90 bp | TCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGCGACACAGGGCCTGCATGAAGTTCCCGCTGTaGGGGATAAGTTGCAAATGG | + |
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Preference number: 3 (lower is better) Translates to: SALSGPVRIVKSARHRACMKFPL*GISCKW Trigger: CCATTTGCAACTTATCCCCAACAGCGGGAACTTCAT...GCAGGCCCTGTGTCGCGCTGACTTCACGATTCTCACAGGCCCGCTCAATGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| 3UTR GCA 72 bp | CTAATGAACTATTCTGAGCAGTCTGAAGTAACTGACTaGACAGCCTTAGATTACCACTCAGGGTGGAACTCT | + |
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Preference number: 3 (lower is better) Translates to: LMNYSEQSEVTD*TALDYHSGWNS Trigger: AGAGTTCCACCCTGAGTGGTAATCTAAGGCTGTGCAGTCAGTTACTTCAGACTGCTCAGAATAGTTCATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| 3UTR-3UTR CAA 90 bp | TATTTTGCTTTGCAGGTCTCTGTCCTAACTACTAAACTCTACCACTGTAACACAATGAGCATAGCTGGGTaGCAATCTTATAAAAACAGG | + |
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Preference number: 3 (lower is better) Translates to: YFALQVSVLTTKLYHCNTMSIAG*QSYKNR Trigger: CCTGTTTTTATAAGATTGCAACCCAGCTATGCTCAT...TGTGTTACAGTGGTAGAGTTTAGTAGTTAGGACAGAGACCTGCAAAGCAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| 3UTR-3UTR CAA 90 bp | AATTATTTTGCTTTGCAGGTCTCTGTCCTAACTACTAAACTCTACCACTGTAACGATTTTCCATTCAAGTaGATGGGTATCAATTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: NYFALQVSVLTTKLYHCNDFPFK*MGINSL Trigger: CAGGGAATTGATACCCATCAACTTGAATGGAAAATC...GTTACAGTGGTAGAGTTTAGTAGTTAGGACAGAGACCTGCAAAGCAAAATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR TCA 90 bp | CGTACCCTGTCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGCGACACGTTCTTTTTGATCCATaGCCTTATCTACACTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: RTLSALSGPVRIVKSARHVLFDP*PYLHSP Trigger: CGGAGAGTGTAGATAAGGTCATGGATCAAAAAGAAC...GTGTCGCGCTGACTTCACGATTCTCACAGGCCCGCTCAATGCGGACAGGGTACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| CDS-3UTR TCA 90 bp | GAAAATACTGCTTCACCACCAAACGGCAGCATTCGAGAGCGTGAGCATCTCGTACAGCATTCGAGAGCGTaGGCATCTCGTACCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ENTASPPNGSIREREHLVQHSRA*ASRTLS Trigger: GGACAGGGTACGAGATGCTCACGCTCTCGAATGCTG...TACGAGATGCTCACGCTCTCGAATGCTGCCGTTTGGTGGTGAAGCAGTATTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| CDS-3UTR GCA 90 bp | CCCTCAACACTTGAATTCATCTATGAAGTCCACCACAGCTCTAAAAATCTCTCTACCATGGCTCCCTCCTaGTCGCCCGCCGAGCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSTLEFIYEVHHSSKNLSTMAPS*SPAEPP Trigger: AGGCGGCTCGGCGGGCGAGCAGGAGGGAGCCATGGT...AGAGAGATTTTTAGAGCTGTGGTGGACTTCATAGATGAATTCAAGTGTTGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR GCA 90 bp | CCTCAACACTTGAATTCATCTATGAAGTCCACCACAGCTCTAAAAATCTCTCTGCCTCCGACTCGGCGCTaGCCCCTTCGGTGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PQHLNSSMKSTTALKISLPPTRR*PLRCLQ Trigger: CTGGAGGCACCGAAGGGGGCAGCGCCGAGTCGGAGG...CAGAGAGATTTTTAGAGCTGTGGTGGACTTCATAGATGAATTCAAGTGTTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CCA 90 bp | TCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGCGACACAGGGCCTGCCAACTTCACCAAATTTaGAAAAGTAGTCCTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SALSGPVRIVKSARHRACQLHQI*KSSPSD Trigger: ATCTGAAGGACTACTTTTCCAAATTTGGTGAAGTTG...GCAGGCCCTGTGTCGCGCTGACTTCACGATTCTCACAGGCCCGCTCAATGCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| CDS-3UTR GCA 90 bp | CTGGGTTGCAATCTTATAAAAACAGGACACAGGTCCTCAATTTGGATCTATCATGACTACACCCGCCGCTaGCGCGAACCGAAACTAGCA | + |
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Preference number: 4 (lower is better) Translates to: LGCNLIKTGHRSSIWIYHDYTRR*REPKLA Trigger: TGCTAGTTTCGGTTCGCGGCAGCGGCGGGTGTAGTC...ATGATAGATCCAAATTGAGGACCTGTGTCCTGTTTTTATAAGATTGCAACCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR TCA 90 bp | CCAACAAACAAATTGACATTAAGTCATTCCCAATTTGGACAGGGAGGACACATTCCCTGGTTCCAGTTTTaGCTGGGGCCACCACCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PTNKLTLSHSQFGQGGHIPWFQF*LGPPPL Trigger: AAGAGGTGGTGGCCCCAGTCAAAACTGGAACCAGGG...AATGTGTCCTCCCTGTCCAAATTGGGAATGACTTAATGTCAATTTGTTTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR GCA 90 bp | TTGGAAAATACTGCTTCACCACCAAACGGCAGCATTCGAGAGCGTGAGCATCTCCAAATTGGAAAATACTaGTTCACCACCAAACGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LENTASPPNGSIREREHLQIGKY*FTTKRQ Trigger: CTGCCGTTTGGTGGTGAAGCAGTATTTTCCAATTTG...GAGATGCTCACGCTCTCGAATGCTGCCGTTTGGTGGTGAAGCAGTATTTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| CDS-3UTR GCA 90 bp | AACAAACAAATTGACATTAAGTCATTCCCAATTTGGACAGGGAGGACACATTATCCGTCCCCGCCGAACTaGTCCTCCGACATAGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: NKQIDIKSFPIWTGRTHYPSPPN*SSDIVL Trigger: TAGCACTATGTCGGAGGAGCAGTTCGGCGGGGACGG...ATAATGTGTCCTCCCTGTCCAAATTGGGAATGACTTAATGTCAATTTGTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR TCA 90 bp | TGCTTAGTTGGAGGTCAAATTCTTAGCATCAGATGTAACTCCACAAAAGTAAGATCGTGGGGAGGAGTTTaGATGGCCTTCATCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: CLVGGQILSIRCNSTKVRSWGGV*MAFILL Trigger: GAGGAGGATGAAGGCCATTCAAACTCCTCCCCACGA...TCTTACTTTTGTGGAGTTACATCTGATGCTAAGAATTTGACCTCCAACTAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CCA 90 bp | AATTATTTTGCTTTGCAGGTCTCTGTCCTAACTACTAAACTCTACCACTGTAACGGTTCCAGTTTTGACTaGGGCCACCACCTCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NYFALQVSVLTTKLYHCNGSSFD*GHHLFH Trigger: GTGGAAGAGGTGGTGGCCCCAGTCAAAACTGGAACC...GTTACAGTGGTAGAGTTTAGTAGTTAGGACAGAGACCTGCAAAGCAAAATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CCA 90 bp | AACAAACAAATTGACATTAAGTCATTCCCAATTTGGACAGGGAGGACACATTATGGGGAGGAGTTTGAATaGCCTTCATCCTCCTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: NKQIDIKSFPIWTGRTHYGEEFE*PSSSSF Trigger: GAACGAGGAGGATGAAGGCCATTCAAACTCCTCCCC...ATAATGTGTCCTCCCTGTCCAAATTGGGAATGACTTAATGTCAATTTGTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR GCA 90 bp | CCTCAACACTTGAATTCATCTATGAAGTCCACCACAGCTCTAAAAATCTCTCTGAACCACTCTGCTGGTTaGTATAATCACCATATCCAT | + |
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Preference number: 4 (lower is better) Translates to: PQHLNSSMKSTTALKISLNHSAG*YNHHIH Trigger: ATGGATATGGTGATTATAGCAACCAGCAGAGTGGTT...CAGAGAGATTTTTAGAGCTGTGGTGGACTTCATAGATGAATTCAAGTGTTGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR GCA 90 bp | CCAACAAACAAATTGACATTAAGTCATTCCCAATTTGGACAGGGAGGACACATTTCTGAAGTAACTGACTaGACAGCCTTAGATTACCAC | + |
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Preference number: 4 (lower is better) Translates to: PTNKLTLSHSQFGQGGHISEVTD*TALDYH Trigger: GTGGTAATCTAAGGCTGTGCAGTCAGTTACTTCAGA...AATGTGTCCTCCCTGTCCAAATTGGGAATGACTTAATGTCAATTTGTTTGTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR TCA 90 bp | CTGGGTTGCAATCTTATAAAAACAGGACACAGGTCCTCAATTTGGATCTATCATTGGGTATCAATTCCCTaGATGCTAATAACAGAACTC | + |
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Preference number: 4 (lower is better) Translates to: LGCNLIKTGHRSSIWIYHWVSIP*MLITEL Trigger: GAGTTCTGTTATTAGCATTCAGGGAATTGATACCCA...ATGATAGATCCAAATTGAGGACCTGTGTCCTGTTTTTATAAGATTGCAACCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR GCA 90 bp | CCTCAACACTTGAATTCATCTATGAAGTCCACCACAGCTCTAAAAATCTCTCTGGACTGTAAATTATTTTaGTTTGCAGGTCTCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PQHLNSSMKSTTALKISLDCKLF*FAGLCP Trigger: AGGACAGAGACCTGCAAAGCAAAATAATTTACAGTC...CAGAGAGATTTTTAGAGCTGTGGTGGACTTCATAGATGAATTCAAGTGTTGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CCA 90 bp | CTGGGTTGCAATCTTATAAAAACAGGACACAGGTCCTCAATTTGGATCTATCATAAGTCATTCCCAATTTaGACAGGGAGGACACATTAT | + |
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Preference number: 4 (lower is better) Translates to: LGCNLIKTGHRSSIWIYHKSFPI*TGRTHY Trigger: ATAATGTGTCCTCCCTGTCCAAATTGGGAATGACTT...ATGATAGATCCAAATTGAGGACCTGTGTCCTGTTTTTATAAGATTGCAACCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR TCA 90 bp | AACAAACAAATTGACATTAAGTCATTCCCAATTTGGACAGGGAGGACACATTATGTTCTTTTTGATCCATaGCCTTATCTACACTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: NKQIDIKSFPIWTGRTHYVLFDP*PYLHSP Trigger: CGGAGAGTGTAGATAAGGTCATGGATCAAAAAGAAC...ATAATGTGTCCTCCCTGTCCAAATTGGGAATGACTTAATGTCAATTTGTTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR GCA 90 bp | CTTCAGTTTCACTTTCTTAAGAGTGACTCAAAAAGTTCCTTAGGCACACATACTGATCTAACTTCAGAGTaGAGTCTACAACTTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: LQFHFLKSDSKSSLGTHTDLTSE*SLQLHQ Trigger: TTGGTGAAGTTGTAGACTGCACTCTGAAGTTAGATC...AGTATGTGTGCCTAAGGAACTTTTTGAGTCACTCTTAAGAAAGTGAAACTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR GCA 90 bp | TATTTTGCTTTGCAGGTCTCTGTCCTAACTACTAAACTCTACCACTGTAACACAAACATTAACTATCTGTaGAAAGGGGTACTTTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: YFALQVSVLTTKLYHCNTNINYL*KGVLLH Trigger: GTGCAAAAGTACCCCTTTGCACAGATAGTTAATGTT...TGTGTTACAGTGGTAGAGTTTAGTAGTTAGGACAGAGACCTGCAAAGCAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR GCA 90 bp | CTTCAGTTTCACTTTCTTAAGAGTGACTCAAAAAGTTCCTTAGGCACACATACTGCAAAGGGGTACTTTTaGACATTTATCCAGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: LQFHFLKSDSKSSLGTHTAKGYF*TFIQIC Trigger: ACAAATCTGGATAAATGTGCAAAAGTACCCCTTTGC...AGTATGTGTGCCTAAGGAACTTTTTGAGTCACTCTTAAGAAAGTGAAACTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CCA 90 bp | TGCTTAGTTGGAGGTCAAATTCTTAGCATCAGATGTAACTCCACAAAAGTAAGACAACTTCACCAAATTTaGAAAAGTAGTCCTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: CLVGGQILSIRCNSTKVRQLHQI*KSSPSD Trigger: ATCTGAAGGACTACTTTTCCAAATTTGGTGAAGTTG...TCTTACTTTTGTGGAGTTACATCTGATGCTAAGAATTTGACCTCCAACTAAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| 3UTR CAA 72 bp | CCATATACAAAACATAAACAAATGAGCATAGCTGGGTaGCAATCTTATAAAAACAGGACACAGGTCCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: PYTKHKQMSIAG*QSYKNRTQVLN Trigger: ATTGAGGACCTGTGTCCTGTTTTTATAAGATTGCAACCCAGCTATGCTCATTTGTTTATGTTTTGTATATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS GCA 90 bp | CATGGCTCCCTCCTGCTCGCCCGCCGAGCCGCCTACCGCCGCCGTTaGCGCTGCCGCCGCCCCGTCCCCGCCGAACTGCTCCTCCGACAT | + |
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Preference number: 5 (lower is better) Translates to: HGSLLLARRAAYRRR*RCRRPVPAELLLRH Trigger: ATGTCGGAGGAGCAGTTCGGCGGGGACGGGGCGGCGGCAGCGGCAACGGCGGCGGTAGGCGGCTCGGCGGGCGAGCAGGAGGGAGCCATG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000313899.12 ENST00000352301.8 ENST00000353341.8 ENST00000503822.1 ENST00000507010.5 ENST00000513584.1 |
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| CDS GCA 90 bp | TCCCTCCTGCTCGCCCGCCGAGCCGCCTACCGCCGCCGTTGCCGCTaGCGCCGCCCCGTCCCCGCCGAACTGCTCCTCCGACATAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SLLLARRAAYRRRCR*RRPVPAELLLRHSA Trigger: AGCACTATGTCGGAGGAGCAGTTCGGCGGGGACGGGGCGGCGGCAGCGGCAACGGCGGCGGTAGGCGGCTCGGCGGGCGAGCAGGAGGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000313899.12 ENST00000352301.8 ENST00000353341.8 ENST00000503822.1 ENST00000507010.5 ENST00000513584.1 |
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| CDS GCA 90 bp | CACTCCAGTAGCGGCGGGAGCAGCAGCGTTAGGCCGGGGTGTGGCTaGACCTCTGCGAAGGCTGTCGTGCCCCGTGCAGCTGCGGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: HSSSGGSSSVRPGCG*TSAKAVVPRAAAAF Trigger: GAACGCCGCAGCTGCACGGGGCACGACAGCCTTCGCAGAGGTGCAGCCACACCCCGGCCTAACGCTGCTGCTCCCGCCGCTACTGGAGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515432.1 |
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| CDS CCA 90 bp | GGGGAGGCTCACACCCTGCGGCGGCTTAAGCCTGGATTTACGCACTaGAGGAGGGAATTAGCCCTGAGATGTCAGCCCTGTGCCCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: GEAHTLRRLKPGFTH*RRELALRCQPCAPG Trigger: GCCAGGGGCACAGGGCTGACATCTCAGGGCTAATTCCCTCCTCCAGTGCGTAAATCCAGGCTTAAGCCGCCGCAGGGTGTGAGCCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515432.1 |
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| CDS-3UTR CAA 90 bp | TCGTACCCTGTCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGCGACACGTACCCTGTCCGCATaGAGCGGGCCTGTGAGAATC | + |
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Preference number: 5 (lower is better) Translates to: SYPVRIERACENREVSATRTLSA*SGPVRI Trigger: GATTCTCACAGGCCCGCTCAATGCGGACAGGGTACG...TGTCGCGCTGACTTCACGATTCTCACAGGCCCGCTCAATGCGGACAGGGTACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| CDS-3UTR CAA 90 bp | TCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGCGACACAGGGCCTGCTGGTTTGTAGCTATTTaGATGACCACCTCGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SALSGPVRIVKSARHRACWFVAI*MTTSPG Trigger: TCCAGGCGAGGTGGTCATCAAAATAGCTACAAACCA...GCAGGCCCTGTGTCGCGCTGACTTCACGATTCTCACAGGCCCGCTCAATGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| CDS-3UTR CAA 90 bp | GCATCTCGTACCCTGTCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGTCCCCACTGTTGCTGTaGCTGATATTGTTCCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: ASRTLSALSGPVRIVKSASPLLL*LILFLR Trigger: TCGAAGGAACAATATCAGCAACAGCAACAGTGGGGA...CGCTGACTTCACGATTCTCACAGGCCCGCTCAATGCGGACAGGGTACGAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| CDS-3UTR CAA 90 bp | GCATCTCGTACCCTGTCCGCATTGAGCGGGCCTGTGAGAATCGTGAAGTCAGCGATGAAGTTCCCGCTGTaGGGGATAAGTTGCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: ASRTLSALSGPVRIVKSAMKFPL*GISCKW Trigger: CCATTTGCAACTTATCCCCAACAGCGGGAACTTCAT...CGCTGACTTCACGATTCTCACAGGCCCGCTCAATGCGGACAGGGTACGAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514671.5 |
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| CDS-3UTR CAA 90 bp | CCTCAACACTTGAATTCATCTATGAAGTCCACCACAGCTCTAAAAATCTCTCTGGTCGTGGGGAGGAGTTaGAATGGCCTTCATCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PQHLNSSMKSTTALKISLVVGRS*NGLHPP Trigger: AGGAGGATGAAGGCCATTCAAACTCCTCCCCACGAC...CAGAGAGATTTTTAGAGCTGTGGTGGACTTCATAGATGAATTCAAGTGTTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CAA 90 bp | CCTCAACACTTGAATTCATCTATGAAGTCCACCACAGCTCTAAAAATCTCTCTGTGGTTTGTAGCTATTTaGATGACCACCTCGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PQHLNSSMKSTTALKISLWFVAI*MTTSPG Trigger: TCCAGGCGAGGTGGTCATCAAAATAGCTACAAACCA...CAGAGAGATTTTTAGAGCTGTGGTGGACTTCATAGATGAATTCAAGTGTTGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CAA 90 bp | CCAACAAACAAATTGACATTAAGTCATTCCCAATTTGGACAGGGAGGACACATTTCCCCACTGTTGCTGTaGCTGATATTGTTCCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: PTNKLTLSHSQFGQGGHISPLLL*LILFLR Trigger: TCGAAGGAACAATATCAGCAACAGCAACAGTGGGGA...AATGTGTCCTCCCTGTCCAAATTGGGAATGACTTAATGTCAATTTGTTTGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS GCA 90 bp | GACTCAACAGTTGCTACAAATCAGGTGGAGAGCAACTACCTTAGTTaGACAATGAAGTCAGGGCTTTCCATGTCTAAAAGTCAAGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: DSTVATNQVESNYLS*TMKSGLSMSKSQVF Trigger: AAAAACTTGACTTTTAGACATGGAAAGCCCTGACTTCATTGTGCAACTAAGGTAGTTGCTCTCCACCTGATTTGTAGCAACTGTTGAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514325.1 |
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| CDS TCA 90 bp | CAAATATGTAGTGAATGCATACAATGGCAGGCATTCAGAATGAGCTaGTTACTTGACTTATTGTATAAAATGGGAGACAATCCCCTCACC | + |
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Preference number: 5 (lower is better) Translates to: QICSECIQWQAFRMS*LLDLLYKMGDNPLT Trigger: GGTGAGGGGATTGTCTCCCATTTTATACAATAAGTCAAGTAATCAGCTCATTCTGAATGCCTGCCATTGTATGCATTCACTACATATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514325.1 |
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| CDS TCA 90 bp | AGGACAAAAAGGCAAAAGCTTAAGAGCACCTGTGTTACATATCTTTaGAAGTCACTATGTTATAATATGGTAAGCACTTCTGGGTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: RTKRQKLKSTCVTYL*KSLCYNMVSTSGCC Trigger: ACAGCACCCAGAAGTGCTTACCATATTATAACATAGTGACTTTCAAAGATATGTAACACAGGTGCTCTTAAGCTTTTGCCTTTTTGTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000508119.5 ENST00000514325.1 |
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| CDS-3UTR CAA 90 bp | AACAAACAAATTGACATTAAGTCATTCCCAATTTGGACAGGGAGGACACATTATATCCTCCCTCAACACTaGAATTCATCTATGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: NKQIDIKSFPIWTGRTHYILPQH*NSSMKS Trigger: GGACTTCATAGATGAATTCAAGTGTTGAGGGAGGAT...ATAATGTGTCCTCCCTGTCCAAATTGGGAATGACTTAATGTCAATTTGTTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CAA 90 bp | TGCTTAGTTGGAGGTCAAATTCTTAGCATCAGATGTAACTCCACAAAAGTAAGAATGAGCATAGCTGGGTaGCAATCTTATAAAAACAGG | + |
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Preference number: 5 (lower is better) Translates to: CLVGGQILSIRCNSTKVRMSIAG*QSYKNR Trigger: CCTGTTTTTATAAGATTGCAACCCAGCTATGCTCAT...TCTTACTTTTGTGGAGTTACATCTGATGCTAAGAATTTGACCTCCAACTAAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CAA 90 bp | AACAAACAAATTGACATTAAGTCATTCCCAATTTGGACAGGGAGGACACATTATGATTTTCCATTCAAGTaGATGGGTATCAATTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: NKQIDIKSFPIWTGRTHYDFPFK*MGINSL Trigger: CAGGGAATTGATACCCATCAACTTGAATGGAAAATC...ATAATGTGTCCTCCCTGTCCAAATTGGGAATGACTTAATGTCAATTTGTTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS-3UTR CAA 90 bp | GTTTGCTTAGTTGGAGGTCAAATTCTTAGCATCAGATGTAACTCCACAAAAGTAGTAAATTATTTTGCTTaGCAGGTCTCTGTCCTAACT | + |
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Preference number: 5 (lower is better) Translates to: VCLVGGQILSIRCNSTKVVNYFA*QVSVLT Trigger: AGTTAGGACAGAGACCTGCAAAGCAAAATAATTTAC...TACTTTTGTGGAGTTACATCTGATGCTAAGAATTTGACCTCCAACTAAGCAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313899.12 |
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| CDS CAA 90 bp | CCATGGCTCCCTCCTGCTCGCCCGCCGAGCCGCCTACCGCCGCCGTaGCCGCTGCCGCCGCCCCGTCCCCGCCGAACTGCTCCTCCGACA | + |
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Preference number: 6 (lower is better) Translates to: PWLPPARPPSRLPPP*PLPPPRPRRTAPPT Trigger: TGTCGGAGGAGCAGTTCGGCGGGGACGGGGCGGCGGCAGCGGCAACGGCGGCGGTAGGCGGCTCGGCGGGCGAGCAGGAGGGAGCCATGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000313899.12 ENST00000352301.8 ENST00000353341.8 ENST00000503822.1 ENST00000507010.5 ENST00000513584.1 |
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| CDS GCA 72 bp | GGCCGGGGTGTGGCTGCACCTCTGCGAAGGCTGTCGTaGCCCGTGCAGCTGCGGCGTTCGGGTGGGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRGVAAPLRRLS*PVQLRRSGGGG Trigger: CCCTCCCCCACCCGAACGCCGCAGCTGCACGGGGCACGACAGCCTTCGCAGAGGTGCAGCCACACCCCGGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515432.1 |
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| CDS GCA 72 bp | TACTGGCGTCAATCTTCGCCCCCTCCGACTCGGCGCTaGCCCCTTCGGTGCCTCCAGACGCGGTTCCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: YWRQSSPPPTRR*PLRCLQTRFRP Trigger: GGGGCGGAACCGCGTCTGGAGGCACCGAAGGGGGCAGCGCCGAGTCGGAGGGGGCGAAGATTGACGCCAGTA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000313899.12 ENST00000352301.8 ENST00000353341.8 ENST00000503822.1 ENST00000507010.5 ENST00000513584.1 |
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| CDS GCA 72 bp | AGCGGCGGGAGCAGCAGCGTTAGGCCGGGGTGTGGCTaGACCTCTGCGAAGGCTGTCGTGCCCCGTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SGGSSSVRPGCG*TSAKAVVPRAA Trigger: AGCTGCACGGGGCACGACAGCCTTCGCAGAGGTGCAGCCACACCCCGGCCTAACGCTGCTGCTCCCGCCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515432.1 |
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| CDS GCA 72 bp | TGCGGCGTTCGGGTGGGGGAGGGGAGGCTCACACCCTaGGGCGGCTTAAGCCTGGATTTACGCACTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: CGVRVGEGRLTP*GGLSLDLRTGG Trigger: TCCTCCAGTGCGTAAATCCAGGCTTAAGCCGCCGCAGGGTGTGAGCCTCCCCTCCCCCACCCGAACGCCGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515432.1 |
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| CDS TCA 72 bp | GGAAGAGACCATACCAAACGGCAGCATTCGAGAGCGTaGGCATCTCGTACCCTGTCCGCATTGAGCGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GRDHTKRQHSRA*ASRTLSALSGP Trigger: AGGCCCGCTCAATGCGGACAGGGTACGAGATGCTCACGCTCTCGAATGCTGCCGTTTGGTATGGTCTCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508119.5 ENST00000514325.1 |
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| CDS CCA 72 bp | CACACCCTGCGGCGGCTTAAGCCTGGATTTACGCACTaGAGGAGGGAATTAGCCCTGAGATGTCAGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: HTLRRLKPGFTH*RRELALRCQPC Trigger: ACAGGGCTGACATCTCAGGGCTAATTCCCTCCTCCAGTGCGTAAATCCAGGCTTAAGCCGCCGCAGGGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515432.1 |
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| CDS CAA 72 bp | CATATGCCCAAACCAAGATGGAAGCTACTACTCAGTTaGAGAGATGCTGCCGTACAGGAGGGCAGCGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: HMPKPRWKLLLS*RDAAVQEGSVS Trigger: ACTGACGCTGCCCTCCTGTACGGCAGCATCTCTCAAACTGAGTAGTAGCTTCCATCTTGGTTTGGGCATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514325.1 |
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| CDS CCA 72 bp | CTACTAAAAACTGGAGAGCATATGCCCAAACCAAGATaGAAGCTACTACTCAGTTTGAGAGATGCTGCCGTA | + |
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Preference number: 6 (lower is better) Translates to: LLKTGEHMPKPR*KLLLSLRDAAV Trigger: TACGGCAGCATCTCTCAAACTGAGTAGTAGCTTCCATCTTGGTTTGGGCATATGCTCTCCAGTTTTTAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514325.1 |
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| CDS CCA 72 bp | AAAACAGGAAGTAGGGTGGTGAGGACTACTAAAAACTaGAGAGCATATGCCCAAACCAAGATGGAAGCTACT | + |
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Preference number: 6 (lower is better) Translates to: KTGSRVVRTTKN*RAYAQTKMEAT Trigger: AGTAGCTTCCATCTTGGTTTGGGCATATGCTCTCCAGTTTTTAGTAGTCCTCACCACCCTACTTCCTGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514325.1 |
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| CDS CAA 72 bp | GCTTCTAGTAGAACCCTTTACCTGACGACTCAACAGTaGCTACAAATCAGGTGGAGAGCAACTACCTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: ASSRTLYLTTQQ*LQIRWRATTLV Trigger: AACTAAGGTAGTTGCTCTCCACCTGATTTGTAGCAACTGTTGAGTCGTCAGGTAAAGGGTTCTACTAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514325.1 |
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| CDS GCA 72 bp | GTTGCTACAAATCAGGTGGAGAGCAACTACCTTAGTTaGACAATGAAGTCAGGGCTTTCCATGTCTAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: VATNQVESNYLS*TMKSGLSMSKS Trigger: ACTTTTAGACATGGAAAGCCCTGACTTCATTGTGCAACTAAGGTAGTTGCTCTCCACCTGATTTGTAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514325.1 |
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| CDS TCA 72 bp | CAAATCAGGTGGAGAGCAACTACCTTAGTTGCACAATaGAGTCAGGGCTTTCCATGTCTAAAAGTCAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: QIRWRATTLVAQ*SQGFPCLKVKF Trigger: AAACTTGACTTTTAGACATGGAAAGCCCTGACTTCATTGTGCAACTAAGGTAGTTGCTCTCCACCTGATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514325.1 |
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| CDS GCA 72 bp | CAACAGGAATTCAGCTCAAGAACTTCTTGCAATTACTaGTACAACGTCTATAAATGGGAAAAGCAAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: QQEFSSRTSCNY*YNVYKWEKQAL Trigger: TAATGCTTGCTTTTCCCATTTATAGACGTTGTAGCAGTAATTGCAAGAAGTTCTTGAGCTGAATTCCTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514325.1 |
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