RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HNRNPA0 (Homo sapiens)

Ensembl gene IDs: ENSG00000177733

Ensembl transcript IDs: ENST00000314940.7

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCTCATTATTCCTTTCCTCCTCTTCCTTCAGGTCCAACAACCCTaGACAATTTGCATTTCTTCAGAGGCCAGACACAGTCCTGCTTCA +
Preference number: 1 (lower is better)
Translates to: GLIIPFLLFLQVQQP*TICISSEARHSPAS
Trigger: TGAAGCAGGACTGTGTCTGGCCTCTGAAGAAATGCAAATTGTTCAGGGTTGTTGGACCTGAAGGAAGAGGAGGAAAGGAATAATGAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 90 bp TTTGGCATCCAATATGCATACTTCTCCAAATACGCTCCATGTTTCTaGCTATCTGTCCTCCACCTAAAATGCCCTCTTTCTCCTCCCACC +
Preference number: 1 (lower is better)
Translates to: FGIQYAYFSKYAPCF*LSVLHLKCPLSPPT
Trigger: GGTGGGAGGAGAAAGAGGGCATTTTAGGTGGAGGACAGATAGGCAGAAACATGGAGCGTATTTGGAGAAGTATGCATATTGGATGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 90 bp AGTCCTGCTTCAGGGCTTTTGCTCTTCCTAATCCTCTACCTAGAATaGTCTTCCCATACCTATATTGCTCACTCCCACATTTCCTTCAAG +
Preference number: 1 (lower is better)
Translates to: SPASGLLLFLILYLE*SSHTYIAHSHISFK
Trigger: CTTGAAGGAAATGTGGGAGTGAGCAATATAGGTATGGGAAGAGCATTCTAGGTAGAGGATTAGGAAGAGCAAAAGCCCTGAAGCAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 90 bp ATGAAGCTTAGTAGAAGGAGCGAAACAACTAGAATTGGTCAAACTTaGATTCAACTCTCAGTTCTACCATGTCACCAGCTGGGGGTCCTT +
Preference number: 1 (lower is better)
Translates to: MKLSRRSETTRIGQT*IQLSVLPCHQLGVL
Trigger: AAGGACCCCCAGCTGGTGACATGGTAGAACTGAGAGTTGAATCCAAGTTTGACCAATTCTAGTTGTTTCGCTCCTTCTACTAAGCTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 90 bp TCTCTTACCTGGTTAACATCAGTTGTCTTAGCAAACTTGCCACTTTaGAACATCCCCCACTGCCATTTATGTTACTCAGTGCTACTGGAC +
Preference number: 1 (lower is better)
Translates to: SLTWLTSVVLANLPL*NIPHCHLCYSVLLD
Trigger: GTCCAGTAGCACTGAGTAACATAAATGGCAGTGGGGGATGTTTCAAAGTGGCAAGTTTGCTAAGACAACTGATGTTAACCAGGTAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 90 bp CACTGGAGCAGAGCTGTGGCCACTCACAATCTCTTGCTAAGTATATaGGAAAGAGAAGGAGCAAATATTTCAGCCTCACTTTTCTATCAC +
Preference number: 1 (lower is better)
Translates to: HWSRAVATHNLLLSI*EREGANISASLFYH
Trigger: GTGATAGAAAAGTGAGGCTGAAATATTTGCTCCTTCTCTTTCTCATATACTTAGCAAGAGATTGTGAGTGGCCACAGCTCTGCTCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 90 bp ATGTCACTTTCTGAGAGACCTACCCATACCACCTATTTTAAAGTATaGTATCCTCACAAACATCCCTTGCAACAATCGCCATTCCTCACC +
Preference number: 1 (lower is better)
Translates to: MSLSERPTHTTYFKV*YPHKHPLQQSPFLT
Trigger: GGTGAGGAATGGCGATTGTTGCAAGGGATGTTTGTGAGGATAGCATACTTTAAAATAGGTGGTATGGGTAGGTCTCTCAGAAAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 90 bp GCTCTTCCTAATCCTCTACCTAGAATGCTCTTCCCATACCTATATTaGTCACTCCCACATTTCCTTCAAGTCTTTGCTCAAATGTCACTT +
Preference number: 1 (lower is better)
Translates to: ALPNPLPRMLFPYLY*SLPHFLQVFAQMSL
Trigger: AAGTGACATTTGAGCAAAGACTTGAAGGAAATGTGGGAGTGAGCAATATAGGTATGGGAAGAGCATTCTAGGTAGAGGATTAGGAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 90 bp GGGCAAAAAGAATATCCAGCACAATGGCCATTTTGTAAAGCTATATaGGCAAGACACAATGCTTCAATGTGCTACCAGCATCTTCAACTA +
Preference number: 1 (lower is better)
Translates to: GQKEYPAQWPFCKAI*ARHNASMCYQHLQL
Trigger: TAGTTGAAGATGCTGGTAGCACATTGAAGCATTGTGTCTTGCGCATATAGCTTTACAAAATGGCCATTGTGCTGGATATTCTTTTTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 90 bp AATTGTCTTAAGCAAGTTTTTAAACAAATTGTTTCGCAGCTACTCTaGCATTCTGCCAGTAGATGGTGCTACAAAGATCGGGAAAGGGAT +
Preference number: 1 (lower is better)
Translates to: NCLKQVFKQIVSQLL*HSASRWCYKDRERD
Trigger: ATCCCTTTCCCGATCTTTGTAGCACCATCTACTGGCAGAATGGCAGAGTAGCTGCGAAACAATTTGTTTAAAAACTTGCTTAAGACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 90 bp GCAATGAGAACATTTGTAAATGTACCTAGTGTTTGGCATCCAATATaGATACTTCTCCAAATACGCTCCATGTTTCTGCCTATCTGTCCT +
Preference number: 1 (lower is better)
Translates to: AMRTFVNVPSVWHPI*ILLQIRSMFLPICP
Trigger: AGGACAGATAGGCAGAAACATGGAGCGTATTTGGAGAAGTATGCATATTGGATGCCAAACACTAGGTACATTTACAAATGTTCTCATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 90 bp ACTTGCCACTTTGAAACATCCCCCACTGCCATTTATGTTACTCAGTaGTACTGGACTAATCTTTGTGAATTAGTTTCACTACCATTATTG +
Preference number: 1 (lower is better)
Translates to: TCHFETSPTAIYVTQ*YWTNLCELVSLPLL
Trigger: CAATAATGGTAGTGAAACTAATTCACAAAGATTAGTCCAGTAGCACTGAGTAACATAAATGGCAGTGGGGGATGTTTCAAAGTGGCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 90 bp CTTACACAAAGGTGCCTAACACCCAATGAAATTGACGGTAAACACTaGGAAATAAGCACACTGTTTAAATGGCAAAAGTTTACACTTGAG +
Preference number: 1 (lower is better)
Translates to: LTQRCLTPNEIDGKH*EISTLFKWQKFTLE
Trigger: CTCAAGTGTAAACTTTTGCCATTTAAACAGTGTGCTTATTTCCCAGTGTTTACCGTCAATTTCATTGGGTGTTAGGCACCTTTGTGTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 90 bp CACTTTGAAACATCCCCCACTGCCATTTATGTTACTCAGTGCTACTaGACTAATCTTTGTGAATTAGTTTCACTACCATTATTGTTGCTC +
Preference number: 1 (lower is better)
Translates to: HFETSPTAIYVTQCY*TNLCELVSLPLLLL
Trigger: GAGCAACAATAATGGTAGTGAAACTAATTCACAAAGATTAGTCCAGTAGCACTGAGTAACATAAATGGCAGTGGGGGATGTTTCAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 90 bp CTCATGGCTAAAGTTTATTACAGTGACACAGTAAGTGTACACAGTTaGATCATACAGGAAAAAGACATAAGCAGAATCTGGAGGAATCCA +
Preference number: 1 (lower is better)
Translates to: LMAKVYYSDTVSVHS*IIQEKDISRIWRNP
Trigger: TGGATTCCTCCAGATTCTGCTTATGTCTTTTTCCTGTATGATCCAACTGTGTACACTTACTGTGTCACTGTAATAAACTTTAGCCATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCGTGGGGCTTAGGAGTTaGCCCCACTTGGGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCVGLRS*PHLGCW
Trigger: CCAACAGCCCAAGTGGGGTCAACTCCTAAGCCCCAC...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAGTGTGTGTGAGGGGGTaGGGCTTAGGAGTTGACCCC +
Preference number: 2 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLVCVRG*GLGVDP
Trigger: GGGGTCAACTCCTAAGCCCCACCCCCTCACACACAC...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 90 bp TATTCCTTTCCTCCTCTTCCTTCAGGTCCAACAACCCTGAACAATTaGCATTTCTTCAGAGGCCAGACACAGTCCTGCTTCAGGGCTTTT +
Preference number: 2 (lower is better)
Translates to: YSFPPLPSGPTTLNN*HFFRGQTQSCFRAF
Trigger: AAAAGCCCTGAAGCAGGACTGTGTCTGGCCTCTGAAGAAATGCAAATTGTTCAGGGTTGTTGGACCTGAAGGAAGAGGAGGAAAGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 90 bp ATTTGCATTTCTTCAGAGGCCAGACACAGTCCTGCTTCAGGGCTTTaGCTCTTCCTAATCCTCTACCTAGAATGCTCTTCCCATACCTAT +
Preference number: 2 (lower is better)
Translates to: ICISSEARHSPASGL*LFLILYLECSSHTY
Trigger: ATAGGTATGGGAAGAGCATTCTAGGTAGAGGATTAGGAAGAGCAAAAGCCCTGAAGCAGGACTGTGTCTGGCCTCTGAAGAAATGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAGGAGTTGACCCCACTTaGGCTGTTGGAAAGAGCTAC +
Preference number: 2 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLGVDPT*AVGKSY
Trigger: GTAGCTCTTTCCAACAGCCCAAGTGGGGTCAACTCC...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACCCCCACCCAGGTTTTaGTACAGAATCAGCAAGTTC +
Preference number: 2 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLPPPRF*YRISKF
Trigger: GAACTTGCTGATTCTGTAGCAAAACCTGGGTGGGGG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR GCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCGTTTCGCAGCTACTCTaGCATTCTGCCAGTAGATGG +
Preference number: 2 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCVSQLL*HSASRW
Trigger: CCATCTACTGGCAGAATGGCAGAGTAGCTGCGAAAC...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAGAGAGACAAGAGAGGTaGCAGGCAAATAGAGGAACA +
Preference number: 2 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLERQER*QANRGT
Trigger: TGTTCCTCTATTTGCCTGCCACCTCTCTTGTCTCTC...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCGGAAAGGGATTTCCATaGGGCCAACAGTTCGGATAT +
Preference number: 2 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCGKGFP*GQQFGY
Trigger: ATATCCGAACTGTTGGCCTCATGGAAATCCCTTTCC...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR GCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGTCTGCCAGTAGATGGTaGTACAAAGATCGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLSASRW*YKDRER
Trigger: CCTTTCCCGATCTTTGTAGCACCATCTACTGGCAGA...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTGTGTACTATTCCAATTaGCCCAGATCTTCCCACCAA +
Preference number: 2 (lower is better)
Translates to: INWLRWRKTLSLSASAVFVYYSN*PRSSHQ
Trigger: TTGGTGGGAAGATCTGGGTCAATTGGAATAGTACAC...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAGAGACAAAGAAAGCCTaGCTGAATAGAGAAGGAAAC +
Preference number: 2 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLETKKA*LNREGN
Trigger: GTTTCCTTCTCTATTCAGGCAGGCTTTCTTTGTCTC...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTACAAAAATGTGTATGTaGGGCCGAGTCCATCTTCAG +
Preference number: 2 (lower is better)
Translates to: INWLRWRKTLSLSASAVFTKMCM*GRVHLQ
Trigger: CTGAAGATGGACTCGGCCCCACATACACATTTTTGT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTACATTCTGCCAGTAGATaGTGCTACAAAGATCGGGAA +
Preference number: 2 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLHSASR*CYKDRE
Trigger: TTCCCGATCTTTGTAGCACCATCTACTGGCAGAATG...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 90 bp ACTATTTACAAGGGTATGGGCACAGTTAAGGCAAATCAACAAGGTTaGAACCTTCTTGGGACTAGAGAATCTAGCAATAGGAGACAGTTA +
Preference number: 2 (lower is better)
Translates to: TIYKGMGTVKANQQG*NLLGTRESSNRRQL
Trigger: TAACTGTCTCCTATTGCTAGATTCTCTAGTCCCAAGAAGGTTCAAACCTTGTTGATTTGCCTTAACTGTGCCCATACCCTTGTAAATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCAGGGCTATTGTGATATaGACTGGCAACTACATTCCT +
Preference number: 2 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCRAIVI*TGNYIP
Trigger: AGGAATGTAGTTGCCAGTTCATATCACAATAGCCCT...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCAGAGGAACCCAGAAGTaGCTAAATACCACTATGCTT +
Preference number: 2 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCRGTQK*LNTTML
Trigger: AAGCATAGTGGTATTTAGTCACTTCTGGGTTCCTCT...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAGAGTTGAAGCAGCAGTaGTTTAGAGAACTACCACAT +
Preference number: 2 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLELKQQ*FRELPH
Trigger: ATGTGGTAGTTCTCTAAATCACTGCTGCTTCAACTC...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR GCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAAGGTTCTGTACCACCTaGTCCCATGAACTCTTAAAT +
Preference number: 2 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLRFCTT*SHELLN
Trigger: ATTTAAGAGTTCATGGGAGCAGGTGGTACAGAACCT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCTACCCTTTGTCAAAATaGCTACTGAGCAGCTATAAC +
Preference number: 2 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCYPLSK*LLSSYN
Trigger: GTTATAGCTGCTCAGTAGTCATTTTGACAAAGGGTA...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTAGTGTTAATATACCATaGACAGAACAGGTTGCCTTC +
Preference number: 2 (lower is better)
Translates to: INWLRWRKTLSLSASAVFSVNIP*TEQVAF
Trigger: GAAGGCAACCTGTTCTGTTCATGGTATATTAACACT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGTGTTTGCATATAAACTaGCAAGAGGAACCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLCLHIN*QEEPRS
Trigger: ACTTCTGGGTTCCTCTTGTCAGTTTATATGCAAACA...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR GCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAGTTTGGCATCCAATATaGATACTTCTCCAAATACGC +
Preference number: 2 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLVWHPI*ILLQIR
Trigger: GCGTATTTGGAGAAGTATGCATATTGGATGCCAAAC...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGCAGCCACCAAAAAGCTaGACCAAATTACCAAATGAA +
Preference number: 2 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLQPPKS*TKLPNE
Trigger: TTCATTTGGTAATTTGGTCCAGCTTTTTGGTGGCTG...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTACGTTTAAACCTGCTCTaGAAGTACAAAAACGCATTT +
Preference number: 2 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLRLNLL*KYKNAF
Trigger: AAATGCGTTTTTGTACTTTCAGAGCAGGTTTAAACG...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR TCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTGACCAAATTACCAAATaGAGTAGCCCACATGTAATT +
Preference number: 2 (lower is better)
Translates to: INWLRWRKTLSLSASAVFDQITK*SSPHVI
Trigger: AATTACATGTGGGCTACTTCATTTGGTAATTTGGTC...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR GCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCAAACAACAACTTGAATaGTATTGCAGGAAAGGGCTA +
Preference number: 2 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCKQQLE*YCRKGL
Trigger: TAGCCCTTTCCTGCAATAGCATTCAAGTTGTTGTTT...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCTCCAAATTTCAGGCATaGGATCCAAGTAGATTTCAT +
Preference number: 2 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCSKFQA*DPSRFH
Trigger: ATGAAATCTACTTGGATCCCATGCCTGAAATTTGGA...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTATTTCATAGGTGGAAGTaGTCAAAACATACAACCAAT +
Preference number: 2 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLFHRWK*SKHTTN
Trigger: ATTGGTTGTATGTTTTGACCACTTCCACCTATGAAA...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAACTCAAAACACTTCTaGGCCCAAGAATTTCAGATA +
Preference number: 2 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLNSKHF*AQEFQI
Trigger: TATCTGAAATTCTTGGGCCCAGAAGTGTTTTGAGTT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAAGCACACTGTTTAAATaGCAAAAGTTTACACTTGAG +
Preference number: 2 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLSTLFK*QKFTLE
Trigger: CTCAAGTGTAAACTTTTGCCATTTAAACAGTGTGCT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAAGAATTGGTCAAACTTaGATTCAACTCTCAGTTCTA +
Preference number: 2 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLRIGQT*IQLSVL
Trigger: TAGAACTGAGAGTTGAATCCAAGTTTGACCAATTCT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 72 bp GTTTCGCAGCTACTCTGCCATTCTGCCAGTAGATGGTaGTACAAAGATCGGGAAAGGGATTTCCATGAGGCC +
Preference number: 3 (lower is better)
Translates to: VSQLLCHSASRW*YKDRERDFHEA
Trigger: GGCCTCATGGAAATCCCTTTCCCGATCTTTGTAGCACCATCTACTGGCAGAATGGCAGAGTAGCTGCGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 72 bp TCGGGCCAGTTTGTCCAAGGTCGCAGTGCTAGAAAGTaGCTGTGTCAGGAACAGAATTTGGTCTATTGGATG +
Preference number: 3 (lower is better)
Translates to: SGQFVQGRSARK*LCQEQNLVYWM
Trigger: CATCCAATAGACCAAATTCTGTTCCTGACACAGTCACTTTCTAGCACTGCGACCTTGGACAAACTGGCCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 72 bp GAATTCATCTCTCTCCTACTAGAGTTGAAGCAGCAGTaGTTTAGAGAACTACCACATGGAAGCTCACCCAGC +
Preference number: 3 (lower is better)
Translates to: EFISLLLELKQQ*FRELPHGSSPS
Trigger: GCTGGGTGAGCTTCCATGTGGTAGTTCTCTAAATCACTGCTGCTTCAACTCTAGTAGGAGAGAGATGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 72 bp ACCAGCTGGGGGTCCTTGGGAGTTACTTTTCTGGCATaGGATTTAGCAACCTTATCTGTGAAGGTTACTGAA +
Preference number: 3 (lower is better)
Translates to: TSWGSLGVTFLA*DLATLSVKVTE
Trigger: TTCAGTAACCTTCACAGATAAGGTTGCTAAATCTCATGCCAGAAAAGTAACTCCCAAGGACCCCCAGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 72 bp ATTCCTTTCCTCCTCTTCCTTCAGGTCCAACAACCCTaGACAATTTGCATTTCTTCAGAGGCCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: IPFLLFLQVQQP*TICISSEARHS
Trigger: ACTGTGTCTGGCCTCTGAAGAAATGCAAATTGTTCAGGGTTGTTGGACCTGAAGGAAGAGGAGGAAAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 72 bp AACAATTTGCATTTCTTCAGAGGCCAGACACAGTCCTaGTTCAGGGCTTTTGCTCTTCCTAATCCTCTACCT +
Preference number: 3 (lower is better)
Translates to: NNLHFFRGQTQS*FRAFALPNPLP
Trigger: AGGTAGAGGATTAGGAAGAGCAAAAGCCCTGAAGCAGGACTGTGTCTGGCCTCTGAAGAAATGCAAATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 72 bp AACCAAAATCCTTACAACAACCTACAAATCCCTACATaGTCTGGCCCCTCTGGCCTCATTATTCCTTTCCTC +
Preference number: 3 (lower is better)
Translates to: NQNPYNNLQIPT*SGPSGLIIPFL
Trigger: GAGGAAAGGAATAATGAGGCCAGAGGGGCCAGATCATGTAGGGATTTGTAGGTTGTTGTAAGGATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 72 bp TCAGGGCTTTTGCTCTTCCTAATCCTCTACCTAGAATaGTCTTCCCATACCTATATTGCTCACTCCCACATT +
Preference number: 3 (lower is better)
Translates to: SGLLLFLILYLE*SSHTYIAHSHI
Trigger: AATGTGGGAGTGAGCAATATAGGTATGGGAAGAGCATTCTAGGTAGAGGATTAGGAAGAGCAAAAGCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 72 bp AAATCCTTACAACAACCTACAAATCCCTACATGATCTaGCCCCTCTGGCCTCATTATTCCTTTCCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: KSLQQPTNPYMI*PLWPHYSFPPL
Trigger: AAGAGGAGGAAAGGAATAATGAGGCCAGAGGGGCCAGATCATGTAGGGATTTGTAGGTTGTTGTAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGACCCCCACCCAGGTTTaGCTACAGAATCAGCAAGTT +
Preference number: 3 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLTPTQV*LQNQQV
Trigger: AACTTGCTGATTCTGTAGCAAAACCTGGGTGGGGGT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 72 bp TTCACACAGAGCACATTTTTATACGAGGGATGTTTCTaGCTAGGGACTCAGTATGCAAGGTTTTCATTGGGA +
Preference number: 3 (lower is better)
Translates to: FTQSTFLYEGCF*LGTQYARFSLG
Trigger: TCCCAATGAAAACCTTGCATACTGAGTCCCTAGGCAGAAACATCCCTCGTATAAAAATGTGCTCTGTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 72 bp AGTAGAAGGAGCGAAACAACTAGAATTGGTCAAACTTaGATTCAACTCTCAGTTCTACCATGTCACCAGCTG +
Preference number: 3 (lower is better)
Translates to: SRRSETTRIGQT*IQLSVLPCHQL
Trigger: CAGCTGGTGACATGGTAGAACTGAGAGTTGAATCCAAGTTTGACCAATTCTAGTTGTTTCGCTCCTTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 72 bp CTAGGGACTCAGTATGCAAGGTTTTCATTGGGAGTTTaGTCATATAGACATCCTTTACCTGGCATGTACCAA +
Preference number: 3 (lower is better)
Translates to: LGTQYARFSLGV*SYRHPLPGMYQ
Trigger: TTGGTACATGCCAGGTAAAGGATGTCTATATGACCAAACTCCCAATGAAAACCTTGCATACTGAGTCCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCGGTGTACTATTCCAATaGACCCAGATCTTCCCACCA +
Preference number: 3 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCGVLFQ*TQIFPP
Trigger: TGGTGGGAAGATCTGGGTCAATTGGAATAGTACACC...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCAAAACATACAACCAATaGTCCCTCCTCCCCAAGTCC +
Preference number: 3 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCKTYNQ*SLLPKS
Trigger: GGACTTGGGGAGGAGGGACAATTGGTTGTATGTTTT...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTATTGACTAGGCAGTCTTaGTTGCTGTTTCAAAAGGCC +
Preference number: 3 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLLTRQS*LLFQKA
Trigger: GGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAA...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAAGACAGCAACCATGTTaGTCTCACTGCTGTGTACCT +
Preference number: 3 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLRQQPC*SHCCVP
Trigger: AGGTACACAGCAGTGAGACAAACATGGTTGCTGTCT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 72 bp AGAGCTGTGGCCACTCACAATCTCTTGCTAAGTATATaGGAAAGAGAAGGAGCAAATATTTCAGCCTCACTT +
Preference number: 3 (lower is better)
Translates to: RAVATHNLLLSI*EREGANISASL
Trigger: AAGTGAGGCTGAAATATTTGCTCCTTCTCTTTCTCATATACTTAGCAAGAGATTGTGAGTGGCCACAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 72 bp AAGCAAGTTTTTAAACAAATTGTTTCGCAGCTACTCTaGCATTCTGCCAGTAGATGGTGCTACAAAGATCGG +
Preference number: 3 (lower is better)
Translates to: KQVFKQIVSQLL*HSASRWCYKDR
Trigger: CCGATCTTTGTAGCACCATCTACTGGCAGAATGGCAGAGTAGCTGCGAAACAATTTGTTTAAAAACTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 72 bp GAATATCCAGCACAATGGCCATTTTGTAAAGCTATATaGGCAAGACACAATGCTTCAATGTGCTACCAGCAT +
Preference number: 3 (lower is better)
Translates to: EYPAQWPFCKAI*ARHNASMCYQH
Trigger: ATGCTGGTAGCACATTGAAGCATTGTGTCTTGCGCATATAGCTTTACAAAATGGCCATTGTGCTGGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 72 bp AATCCTCTACCTAGAATGCTCTTCCCATACCTATATTaGTCACTCCCACATTTCCTTCAAGTCTTTGCTCAA +
Preference number: 3 (lower is better)
Translates to: NPLPRMLFPYLY*SLPHFLQVFAQ
Trigger: TTGAGCAAAGACTTGAAGGAAATGTGGGAGTGAGCAATATAGGTATGGGAAGAGCATTCTAGGTAGAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 72 bp AGTTGGATCATACAGGAAAAAGACATAAGCAGAATCTaGAGGAATCCATGTGCAGGCTTCTTTAGGATCTCT +
Preference number: 3 (lower is better)
Translates to: SWIIQEKDISRI*RNPCAGFFRIS
Trigger: AGAGATCCTAAAGAAGCCTGCACATGGATTCCTCCAGATTCTGCTTATGTCTTTTTCCTGTATGATCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAGCAAGTGCTGTCTTTTaGGGTAAAATCCGTGTAGTC +
Preference number: 3 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLASAVF*GKIRVV
Trigger: GACTACACGGATTTTACCCAAAAAGACAGCACTTGC...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAACTAGGCAGTCTTTGTaGCTGTTTCAAAAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLTRQSL*LFQKAK
Trigger: TTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTATTGGATTTTACATTTTaGTATGAGAGCTGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLLDFTF*YESCSA
Trigger: AGCTGAGCAGCTCTCATACAAAAATGTAAAATCCAA...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 72 bp TCTACAGCCACCAAAAAGCTGGACCAAATTACCAAATaGAGTAGCCCACATGTAATTTGTGTATCACTAGAA +
Preference number: 3 (lower is better)
Translates to: STATKKLDQITK*SSPHVICVSLE
Trigger: TTCTAGTGATACACAAATTACATGTGGGCTACTTCATTTGGTAATTTGGTCCAGCTTTTTGGTGGCTGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 72 bp ACTACAGTAAGCCCTTCTTTATATGCATTCTTTCACTaGATCTGCCCAACAATCCTATGTAGCAGGTATTAC +
Preference number: 3 (lower is better)
Translates to: TTVSPSLYAFFH*ICPTILCSRYY
Trigger: GTAATACCTGCTACATAGGATTGTTGGGCAGATTCAGTGAAAGAATGCATATAAAGAAGGGCTTACTGTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 72 bp AGGTGCCTAACACCCAATGAAATTGACGGTAAACACTaGGAAATAAGCACACTGTTTAAATGGCAAAAGTTT +
Preference number: 3 (lower is better)
Translates to: RCLTPNEIDGKH*EISTLFKWQKF
Trigger: AAACTTTTGCCATTTAAACAGTGTGCTTATTTCCCAGTGTTTACCGTCAATTTCATTGGGTGTTAGGCACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CCA 72 bp ACATCCCCCACTGCCATTTATGTTACTCAGTGCTACTaGACTAATCTTTGTGAATTAGTTTCACTACCATTA +
Preference number: 3 (lower is better)
Translates to: TSPTAIYVTQCY*TNLCELVSLPL
Trigger: TAATGGTAGTGAAACTAATTCACAAAGATTAGTCCAGTAGCACTGAGTAACATAAATGGCAGTGGGGGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTAAGTTTTTAAACAAATaGTTTCGCAGCTACTCTGCC +
Preference number: 3 (lower is better)
Translates to: INWLRWRKTLSLSASAVFKFLNK*FRSYSA
Trigger: GGCAGAGTAGCTGCGAAACAATTTGTTTAAAAACTT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR-3UTR CAA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCAAAGGAAATGCTCATaGAAGCAGTTTGGATTTTAC +
Preference number: 3 (lower is better)
Translates to: INWLRWRKTLSLSASAVFQRKCS*KQFGFY
Trigger: GTAAAATCCAAACTGCTTCAATGAGCATTTCCTTTG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR TCA 72 bp AACTCCAATTTTGATGGTGTGAACAATATGAGATTGTaGCACAATGCTGTAAAGGAAAAGATGCATCATCTC +
Preference number: 3 (lower is better)
Translates to: NSNFDGVNNMRL*HNAVKEKMHHL
Trigger: GAGATGATGCATCTTTTCCTTTACAGCATTGTGTCACAATCTCATATTGTTCACACCATCAAAATTGGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR GCA 72 bp ACAAAAATTATATTCAACACTAGGTTCTGTACCACCTaGTCCCATGAACTCTTAAATCTGAATAATGTTCAG +
Preference number: 3 (lower is better)
Translates to: TKIIFNTRFCTT*SHELLNLNNVQ
Trigger: CTGAACATTATTCAGATTTAAGAGTTCATGGGAGCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCTTGGGCCCAGCCGTTaGTGGAGCCACCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFLGPSR*WSHPRR
Trigger: GCGGCGGGGGTGGCTCCAGCAACGGCTGGGCCCAAG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAGGGCCCAGCCGTTGCTaGAGCCACCCCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLGPSRC*SHPRRS
Trigger: TGAGCGGCGGGGGTGGCTCCAGCAACGGCTGGGCCC...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTGCCTTGCCCCCGCCCTaGGAGCTCCGAGGTTTCGCC +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFALPPP*ELRGFA
Trigger: GGCGAAACCTCGGAGCTCGCAGGGCGGGGGCAAGGC...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTATTGCCGTCCACGGCATaGGGCGAGGCGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLLPSTA*GEAAMA
Trigger: CGCCATGGCCGCCTCGCCCCATGCCGTGGACGGCAA...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACGCCGCCGCCGCCCTTaGAAAGGCCGTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLRRRRP*KGRSGL
Trigger: GAGACCAGAACGGCCTTTCCAAGGGCGGCGGCGGCG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAAGGGAAGGGGAGCGGTaGCGGCTAAAGGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLREGER*RLKGEP
Trigger: CGGCTCGCCCTTTAGCCGGCACCGCTCCCCTTCCCT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTATTCTTAACCTTGGCGTaGGCACCGGGCCGCGCCGAA +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLFLTLA*APGRAE
Trigger: TTCGGCGCGGCCCGGTGCCCACGCCAAGGTTAAGAA...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 72 bp CCTCCTCTTCCTTCAGGTCCAACAACCCTGAACAATTaGCATTTCTTCAGAGGCCAGACACAGTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PPLPSGPTTLNN*HFFRGQTQSCF
Trigger: GAAGCAGGACTGTGTCTGGCCTCTGAAGAAATGCAAATTGTTCAGGGTTGTTGGACCTGAAGGAAGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGTCAGCTCCACAGTGTTaGCGTCCACGGCATGGGGCG +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLSAPQC*RPRHGA
Trigger: CGCCCCATGCCGTGGACGGCAACACTGTGGAGCTGA...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGATGCTGGCTGTAGCTaGCGAAGCCGCCGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLDAGCS*RSRRSR
Trigger: ACGGCTTCGGCGGCTTCGGCAGCTACAGCCAGCATC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGGCCTCTACACAGCTTaGGCCCAGCCGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLGLYTA*AQPLLE
Trigger: CTCCAGCAACGGCTGGGCCCAAGCTGTGTAGAGGCC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCCAAAGGCCTCAAAGTaGCCGCGCAGGCCCGACTCA +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFPKASK*PRRPDS
Trigger: TGAGTCGGGCCTGCGCGGCCACTTTGAGGCCTTTGG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCCGGGAGCGCTTGGTCTaGGGATTCACCACCACCACG +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCRERLV*GFTTTT
Trigger: CGTGGTGGTGGTGAATCCCCAGACCAAGCGCTCCCG...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCTTGGAAAGGCCGTTCTaGTCTCGACCACCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCLERPF*SRPPPR
Trigger: GCGCGGCGGTGGTCGAGACCAGAACGGCCTTTCCAA...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCCCGACTCACTCGTCTaGACATTGAGGCCGCCGATG +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFPDSLV*TLRPPM
Trigger: CATCGGCGGCCTCAATGTGCAGACGAGTGAGTCGGG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCCACCGCGGCCTTGTCTaGCGCGTCGTGATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCHRGLV*RVVILE
Trigger: TTCCAGAATCACGACGCGGCAGACAAGGCCGCGGTG...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTGCGAGCCGAGGAGACTaGAAGACAACCAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFASRGD*KTTKAT
Trigger: GGTGGCCTTGGTTGTCTTCCAGTCTCCTCGGCTCGC...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCGCCGCCGCTCTTCATaGGCCCATAGGAGGACTGAT +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFRRRSS*AHRRTD
Trigger: ATCAGTCCTCCTATGGGCCCATGAAGAGCGGCGGCG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTGTGTGTGTGAGGGGGTaGGGCTTAGGAGTTGACCCC +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFVCVRG*GLGVDP
Trigger: GGGGTCAACTCCTAAGCCCCACCCCCTCACACACAC...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAGAATCGGATGGAACTTaGCCACCGCGGCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLESDGT*PPRPCL
Trigger: CAGACAAGGCCGCGGTGGTCAAGTTCCATCCGATTC...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTATCCACGCGATGGCCCTaGATCGGATGGAACTTGACC +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLSTRWP*IGWNLT
Trigger: GGTCAAGTTCCATCCGATTCAGGGCCATCGCGTGGA...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTAGCAACGGGAGCGCTTaGTCTGGGGATTCACCACCA +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFSNGSA*SGDSPP
Trigger: TGGTGGTGAATCCCCAGACCAAGCGCTCCCGTTGCT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGCCAAACTGCGAGAAGTaGTCGATCAGGTCGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLPNCEK*SIRSPS
Trigger: TGAGGGCGACCTGATCGAGCACTTCTCGCAGTTTGG...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTATCCACGGTGCCAAACTaGGAGAAGTGCTCGATCAGG +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLSTVPN*EKCSIR
Trigger: CCTGATCGAGCACTTCTCGCAGTTTGGCACCGTGGA...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCGAATCCACGCTTCTTaGCGGACTGCTTGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFRIHAS*RTACRQ
Trigger: TTGCCGACAAGCAGTCCGGCAAGAAGCGTGGATTCG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGATCCTCCTTGGGGACTaGTTTCTTCACCTCCACGCG +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLILLGD*FLHLHA
Trigger: CGCGTGGAGGTGAAGAAAGCAGTCCCCAAGGAGGAT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTATCTTTTAGAAGGAGCTaGCTCCATAGCCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLSFRRS*LHSHPH
Trigger: GTGGGGGTGGCTATGGAGGCAGCTCCTTCTAAAAGA...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCCGCCGCCGTTATCGTTaGTTAAGGCCTCTACACAGC +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCRRRYR*LRPLHS
Trigger: GCTGTGTAGAGGCCTTAACCAACGATAACGGCGGCG...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGCCGCCTCCTCCACATTaGAGTAGGTCACGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLPPPPH*SRSRSQ
Trigger: TTGGCTTCGTGACCTACTCCAATGTGGAGGAGGCGG...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAGATCTCTCCCTCCCATaGAGATTCACACAGAGCACA +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLDLSLP*RFTQST
Trigger: TGTGCTCTGTGTGAATCTTCATGGGAGGGAGAGATC...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCCGCTTCTTGCCGGACTaGTTGTCGGCAATAATCTCG +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCRFLPD*LSAIIS
Trigger: CGAGATTATTGCCGACAAGCAGTCCGGCAAGAAGCG...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAGTTTCGCAGCTACTCTaGCATTCTGCCAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLVSQLL*HSASRW
Trigger: CCATCTACTGGCAGAATGGCAGAGTAGCTGCGAAAC...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCGTCCTCCACCTAAAATaGCCTCTTTCTCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCVLHLK*PLSPPT
Trigger: GGTGGGAGGAGAAAGAGGGCATTTTAGGTGGAGGAC...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGGCCAGACACAGTCCTaGTTCAGGGCTTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLGQTQS*FRAFAL
Trigger: AAGAGCAAAAGCCCTGAAGCAGGACTGTGTCTGGCC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAGGAGTTGACCCCACTTaGGCTGTTGGAAAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLGVDPT*AVGKSY
Trigger: GTAGCTCTTTCCAACAGCCCAAGTGGGGTCAACTCC...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGCCAGCTGGGGGTCCTTaGGAGTTACTTTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLPAGGP*ELLFWH
Trigger: ATGCCAGAAAAGTAACTCCCAAGGACCCCCAGCTGG...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 72 bp GGACAGCTAAGGAGTTATTTGACTAGGCAGTCTTTGTaGCTGTTTCAAAAGGCCAAAATAAGGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GQLRSYLTRQSL*LFQKAKIRLRR
Trigger: CCTCCTCAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACTCCTTAGCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 72 bp GCAGGACAGCTAAGGAGTTATTTGACTAGGCAGTCTTaGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGQLRSYLTRQS*LLFQKAKIRLR
Trigger: CCTCAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACTCCTTAGCTGTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 72 bp TGTTTCTGCCTAGGGACTCAGTATGCAAGGTTTTCATaGGGAGTTTGGTCATATAGACATCCTTTACCTGGC +
Preference number: 4 (lower is better)
Translates to: CFCLGTQYARFS*GVWSYRHPLPG
Trigger: GCCAGGTAAAGGATGTCTATATGACCAAACTCCCAATGAAAACCTTGCATACTGAGTCCCTAGGCAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCTTGTCTGCCGCGTCGTaGTTCTGGAAATACACGAAG +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCLSAAS*FWKYTK
Trigger: CTTCGTGTATTTCCAGAATCACGACGCGGCAGACAA...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACCACAATGCCTCTCTTaGTCCTTCTTCCTACCTGAA +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLPQCLS*SFFLPE
Trigger: TTCAGGTAGGAAGAAGGATCAAGAGAGGCATTGTGG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGCAAACTTGCCACTTTaGAACATCCCCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLANLPL*NIPHCH
Trigger: ATGGCAGTGGGGGATGTTTCAAAGTGGCAAGTTTGC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCCCCCACCCAGGTTTTaGTACAGAATCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFPPPRF*YRISKF
Trigger: GAACTTGCTGATTCTGTAGCAAAACCTGGGTGGGGG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTATCCAAATGCCTATCTaGAATCAGCAGACGCGGGCA +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFIQMPI*NQQTRA
Trigger: TGCCCGCGTCTGCTGATTGCAGATAGGCATTTGGAT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAAATCCCTACATGATCTaGCCCCTCTGGCCTCATTAT +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLNPYMI*PLWPHY
Trigger: ATAATGAGGCCAGAGGGGCCAGATCATGTAGGGATT...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 72 bp GAAGTTCACTCAAAAGCAGGACAGCTAAGGAGTTATTaGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: EVHSKAGQLRSY*TRQSLLLFQKA
Trigger: GGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACTCCTTAGCTGTCCTGCTTTTGAGTGAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 72 bp AAGGGTATGGGCACAGTTAAGGCAAATCAACAAGGTTaGAACCTTCTTGGGACTAGAGAATCTAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: KGMGTVKANQQG*NLLGTRESSNR
Trigger: CCTATTGCTAGATTCTCTAGTCCCAAGAAGGTTCAAACCTTGTTGATTTGCCTTAACTGTGCCCATACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGGAAAGGGATTTCCATaGGGCCAACAGTTCGGATAT +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLGKGFP*GQQFGY
Trigger: ATATCCGAACTGTTGGCCTCATGGAAATCCCTTTCC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAGTGTACTATTCCAATTaGCCCAGATCTTCCCACCAA +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLVYYSN*PRSSHQ
Trigger: TTGGTGGGAAGATCTGGGTCAATTGGAATAGTACAC...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCGCAGTGCTAGAAAGTaGCTGTGTCAGGAACAGAAT +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFRSARK*LCQEQN
Trigger: ATTCTGTTCCTGACACAGTCACTTTCTAGCACTGCG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAATCCTTCTTCCTACCTaGAGTCACCTCTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLILLPT*SHLSST
Trigger: TGTTGAGGAGAGGTGACTTCAGGTAGGAAGAAGGAT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTATCAAATGTCACTTTCTaGGAGACCTACCCATACCAC +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLSNVTF*ETYPYH
Trigger: GTGGTATGGGTAGGTCTCTCAGAAAGTGACATTTGA...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCGAGAGACAAGAGAGGTaGCAGGCAAATAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCERQER*QANRGT
Trigger: TGTTCCTCTATTTGCCTGCCACCTCTCTTGTCTCTC...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACATTCTGCCAGTAGATaGTGCTACAAAGATCGGGAA +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLHSASR*CYKDRE
Trigger: TTCCCGATCTTTGTAGCACCATCTACTGGCAGAATG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACTAGATCTTCACGTTTaGTGGTGTGGGAAGATCAAG +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLLDLHV*WCGKIK
Trigger: CTTGATCTTCCCACACCACCAAACGTGAAGATCTAG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGATGATCTGGCCCCTCTaGCCTCATTATTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLMIWPL*PHYSFP
Trigger: AGGAAAGGAATAATGAGGCCAGAGGGGCCAGATCAT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGACATAAGCAGAATCTaGAGGAATCCATGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLDISRI*RNPCAG
Trigger: GCCTGCACATGGATTCCTCCAGATTCTGCTTATGTC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAAGGGCTATTGTGATATaGACTGGCAACTACATTCCT +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLRAIVI*TGNYIP
Trigger: AGGAATGTAGTTGCCAGTTCATATCACAATAGCCCT...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCTTAGCTGGAAGTCAATaGAGCTTAGTAGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCLAGSQ*SLVEGA
Trigger: CGCTCCTTCTACTAAGCTTCATTGACTTCCAGCTAA...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAAGGTTCTGTACCACCTaGTCCCATGAACTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLRFCTT*SHELLN
Trigger: ATTTAAGAGTTCATGGGAGCAGGTGGTACAGAACCT...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAATGCGCAAGACACAATaGTTCAATGTGCTACCAGCA +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLMRKTQ*FNVLPA
Trigger: TGCTGGTAGCACATTGAAGCATTGTGTCTTGCGCAT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCAGTAGATATCCTCCTTaGGGACTGCTTTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCSRYPP*GLLSSP
Trigger: AGGTGAAGAAAGCAGTCCCCAAGGAGGATATCTACT...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAGATCTTCACGTTTGGTaGTGTGGGAAGATCAAGTCA +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLDLHVW*CGKIKS
Trigger: TGACTTGATCTTCCCACACCACCAAACGTGAAGATC...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTAACAGCTTACACAACTaGGAATTCTCCATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFNSLHN*EFSISK
Trigger: CTTGGAGATGGAGAATTCTCAGTTGTGTAAGCTGTT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAGAGGAACCCAGAAGTaGCTAAATACCACTATGCTT +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLRGTQK*LNTTML
Trigger: AAGCATAGTGGTATTTAGTCACTTCTGGGTTCCTCT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGAGTTGAAGCAGCAGTaGTTTAGAGAACTACCACAT +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLELKQQ*FRELPH
Trigger: ATGTGGTAGTTCTCTAAATCACTGCTGCTTCAACTC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGCAGGTCCAACAACCCTaGACAATTTGCATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLQVQQP*TICISS
Trigger: TGAAGAAATGCAAATTGTTCAGGGTTGTTGGACCTG...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACTAGGCAGTCTTTGTTaGTGTTTCAAAAGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLLGSLC*CFKRPK
Trigger: TTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGAGACAAAGAAAGCCTaGCTGAATAGAGAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLETKKA*LNREGN
Trigger: GTTTCCTTCTCTATTCAGGCAGGCTTTCTTTGTCTC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAGTTTGGCATCCAATATaGATACTTCTCCAAATACGC +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLVWHPI*ILLQIR
Trigger: GCGTATTTGGAGAAGTATGCATATTGGATGCCAAAC...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACACAATGCTTCAATGTaGTACCAGCATCTTCAACTA +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLHNASM*YQHLQL
Trigger: TAGTTGAAGATGCTGGTAGCACATTGAAGCATTGTG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTATCACGTTTGGTGGTGTaGGAAGATCAAGTCATAAGA +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLSRLVV*EDQVIR
Trigger: TCTTATGACTTGATCTTCCCACACCACCAAACGTGA...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAGACCAAATTACCAAATaGAGTAGCCCACATGTAATT +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLDQITK*SSPHVI
Trigger: AATTACATGTGGGCTACTTCATTTGGTAATTTGGTC...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAAGTGTTAATATACCATaGACAGAACAGGTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLSVNIP*TEQVAF
Trigger: GAAGGCAACCTGTTCTGTTCATGGTATATTAACACT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTTGTTTGCATATAAACTaGCAAGAGGAACCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFCLHIN*QEEPRS
Trigger: ACTTCTGGGTTCCTCTTGTCAGTTTATATGCAAACA...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACCAGAAAAGAGAGTATaGAGTTCTTTATTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLPEKRV*SSLFVS
Trigger: GCTGACAAATAAAGAACTGCATACTCTCTTTTCTGG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAATCCTCTACCTAGAATaGTCTTCCCATACCTATATT +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLILYLE*SSHTYI
Trigger: AATATAGGTATGGGAAGAGCATTCTAGGTAGAGGAT...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCAGCCACCAAAAAGCTaGACCAAATTACCAAATGAA +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFQPPKS*TKLPNE
Trigger: TTCATTTGGTAATTTGGTCCAGCTTTTTGGTGGCTG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTCGTTTAAACCTGCTCTaGAAGTACAAAAACGCATTT +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFRLNLL*KYKNAF
Trigger: AAATGCGTTTTTGTACTTTCAGAGCAGGTTTAAACG...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAGTTACTTTTCTGGCATaGGATTTAGCAACCTTATCT +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLVTFLA*DLATLS
Trigger: AGATAAGGTTGCTAAATCTCATGCCAGAAAAGTAAC...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR TCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCCTCTTGCTAAGTATATaGGAAAGAGAAGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCLLLSI*EREGAN
Trigger: ATTTGCTCCTTCTCTTTCTCATATACTTAGCAAGAG...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTAAACAACAACTTGAATaGTATTGCAGGAAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFKQQLE*YCRKGL
Trigger: TAGCCCTTTCCTGCAATAGCATTCAAGTTGTTGTTT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTATGGAAAATAGAGAATTaGCCTTCTAGTCTTCCTACT +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLWKIEN*PSSLPT
Trigger: AGTAGGAAGACTAGAAGGGCAATTCTCTATTTTCCA...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGAGATTGTGACACAATaGTGTAAAGGAAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLEIVTQ*CKGKDA
Trigger: TGCATCTTTTCCTTTACAGCATTGTGTCACAATCTC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTAGGTTAAATGTTATATaGTCCACAATGCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFRLNVI*STMPLL
Trigger: CAAGAGAGGCATTGTGGAGCATATAACATTTAACCT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGTCCAAATTTCAGGCATaGGATCCAAGTAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLSKFQA*DPSRFH
Trigger: ATGAAATCTACTTGGATCCCATGCCTGAAATTTGGA...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCAACTCAAAACACTTCTaGGCCCAAGAATTTCAGATA +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCNSKHF*AQEFQI
Trigger: TATCTGAAATTCTTGGGCCCAGAAGTGTTTTGAGTT...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAATTGACGGTAAACACTaGGAAATAAGCACACTGTTT +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLIDGKH*EISTLF
Trigger: AAACAGTGTGCTTATTTCCCAGTGTTTACCGTCAAT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAAATGTACCTAGTGTTTaGCATCCAATATGCATACTT +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLNVPSV*HPICIL
Trigger: AAGTATGCATATTGGATGCCAAACACTAGGTACATT...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAGTTACTCAGTGCTACTaGACTAATCTTTGTGAATTA +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLVTQCY*TNLCEL
Trigger: TAATTCACAAAGATTAGTCCAGTAGCACTGAGTAAC...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTATGCTCAAAACTGAAATaGTTCACCATTCATTTAGTG +
Preference number: 4 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLCSKLK*FTIHLV
Trigger: CACTAAATGAATGGTGAACCATTTCAGTTTTGAGCA...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGATTCAAATCAGATCATaGAACTCCTCTGCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLIQIRS*NSSAQN
Trigger: GTTTTGAGCAGAGGAGTTCCATGATCTGATTTGAAT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCGTAAGTGTACACAGTTaGATCATACAGGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCVSVHS*IIQEKD
Trigger: GTCTTTTTCCTGTATGATCCAACTGTGTACACTTAC...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314940.7
3UTR CAA 72 bp TGGATGAATGGGTACAATCAGTATAGTCATTCTGATTaGATAGTTATCACTGTGAACCTTAACCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: WMNGYNQYSHSD*IVITVNLNHLQ
Trigger: CTGCAAGTGGTTAAGGTTCACAGTGATAACTATCAAATCAGAATGACTATACTGATTGTACCCATTCATCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAAGCCCTTCTTTATATaGATTCTTTCACTGAATCTG +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLKPFFI*ILSLNL
Trigger: CAGATTCAGTGAAAGAATGCATATAAAGAAGGGCTT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTTTTTGTAAAGCTATATaGGCAAGACACAATGCTTCA +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFFCKAI*ARHNAS
Trigger: TGAAGCATTGTGTCTTGCGCATATAGCTTTACAAAA...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTACCTATTTTAAAGTATaGTATCCTCACAAACATCCC +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFTYFKV*YPHKHP
Trigger: GGGATGTTTGTGAGGATAGCATACTTTAAAATAGGT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR GCA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAAGATATAACTTTTTCTaGACACCCCCAATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLRYNFF*TPPIQD
Trigger: ATCTTGAATTGGGGGTGTGCAGAAAAAGTTATATCT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAGCACACTGTTTAAATaGCAAAAGTTTACACTTGAG +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLSTLFK*QKFTLE
Trigger: CTCAAGTGTAAACTTTTGCCATTTAAACAGTGTGCT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAGAATTGGTCAAACTTaGATTCAACTCTCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLRIGQT*IQLSVL
Trigger: TAGAACTGAGAGTTGAATCCAAGTTTGACCAATTCT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTTCTCATTCTCTTACCTaGTTAACATCAGTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: INWLRWRKTLSLSASAVFSHSLT*LTSVVL
Trigger: TAAGACAACTGATGTTAACCAGGTAAGAGAATGAGA...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGAATATCCAGCACAATaGCCATTTTGTAAAGCTATA +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLEYPAQ*PFCKAI
Trigger: TATAGCTTTACAAAATGGCCATTGTGCTGGATATTC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CCA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGAGTTGAAAAGATTGTaGATCACTTATACCTTATCC +
Preference number: 4 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLELKRL*ITYTLS
Trigger: GGATAAGGTATAAGTGATCCACAATCTTTTCAACTC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 90 bp CGCCGCCGTAACCACCGTAGCTGTTGTAACCGCCGCCGCCGCCCTTaGAAAGGCCGTTCTGGTCTCGACCACCGCCGCGCCCCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: RRRNHRSCCNRRRRP*KGRSGLDHRRAPGR
Trigger: GCGGCCGGGGGCGCGGCGGTGGTCGAGACCAGAACGGCCTTTCCAAGGGCGGCGGCGGCGGTTACAACAGCTACGGTGGTTACGGCGGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 90 bp AGCCACCCCCACCGCCATAGCCGCCTCTGTAAGGTCCACTATTACTaGGACCGCCCCAGCTACTGCCTCCACCGCCGCCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: SHPHRHSRLCKVHYY*DRPSYCLHRRRRRR
Trigger: GCGGCGGCGGCGGCGGCGGTGGAGGCAGTAGCTGGGGCGGTCGCAGTAATAGTGGACCTTACAGAGGCGGCTATGGCGGTGGGGGTGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 90 bp CGCCCCAGCTACTGCCTCCACCGCCGCCGCCGCCGCCGCTCTTCATaGGCCCATAGGAGGACTGATGCTGGCTGTAGCTGCCGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: RPSYCLHRRRRRRSS*AHRRTDAGCSCRSR
Trigger: GCGGCTTCGGCAGCTACAGCCAGCATCAGTCCTCCTATGGGCCCATGAAGAGCGGCGGCGGCGGCGGCGGTGGAGGCAGTAGCTGGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 90 bp CCCGCCCTGCGAGCTCCGAGGTTTCGCCGTCGCCGCCGTTATCGTTaGTTAAGGCCTCTACACAGCTTGGGCCCAGCCGTTGCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PALRAPRFRRRRRYR*LRPLHSLGPAVAGA
Trigger: GGCTCCAGCAACGGCTGGGCCCAAGCTGTGTAGAGGCCTTAACCAACGATAACGGCGGCGACGGCGAAACCTCGGAGCTCGCAGGGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 90 bp GGGAGGGAAGGAAGGAAGAGAGGAAGGGGGAGGGAAGGGGAGCGGTaGCGGCTAAAGGGCGAGCCGAGGAGACTGGAAGACAACCAAGGC +
Preference number: 5 (lower is better)
Translates to: GREGRKRGRGREGER*RLKGEPRRLEDNQG
Trigger: GCCTTGGTTGTCTTCCAGTCTCCTCGGCTCGCCCTTTAGCCGGCACCGCTCCCCTTCCCTCCCCCTTCCTCTCTTCCTTCCTTCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 90 bp TTCACCACCACCACGCAGTCCGTCAGAGTCCCAAAGGCCTCAAAGTaGCCGCGCAGGCCCGACTCACTCGTCTGCACATTGAGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: FTTTTQSVRVPKASK*PRRPDSLVCTLRPP
Trigger: CGGCGGCCTCAATGTGCAGACGAGTGAGTCGGGCCTGCGCGGCCACTTTGAGGCCTTTGGGACTCTGACGGACTGCGTGGTGGTGGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 90 bp ACGTCTCCTTTAAGGCCTCCGACAAAGAGCTTCTTAACCTTGGCGTaGGCACCGGGCCGCGCCGAATCCTCCCGGGACACCGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: TSPLRPPTKSFLTLA*APGRAESSRDTARF
Trigger: GAAGCGGGCGGTGTCCCGGGAGGATTCGGCGCGGCCCGGTGCCCACGCCAAGGTTAAGAAGCTCTTTGTCGGAGGCCTTAAAGGAGACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 90 bp ACAGCTTACACAACTGAGAATTCTCCATCTCCAAGGCCCGGGCCTTaGCCCCGCCCTGCGAGCTCCGAGGTTTCGCCGTCGCCGCCGTTA +
Preference number: 5 (lower is better)
Translates to: TAYTTENSPSPRPGP*PRPASSEVSPSPPL
Trigger: TAACGGCGGCGACGGCGAAACCTCGGAGCTCGCAGGGCGGGGGCAAGGCCCGGGCCTTGGAGATGGAGAATTCTCAGTTGTGTAAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 90 bp AGGATCGGGAGCCGCCTCCACCCCCACCGGAGTAGATATCCTCCTTaGGGACTGCTTTCTTCACCTCCACGCGATGGCCCTGAATCGGAT +
Preference number: 5 (lower is better)
Translates to: RIGSRLHPHRSRYPP*GLLSSPPRDGPESD
Trigger: ATCCGATTCAGGGCCATCGCGTGGAGGTGAAGAAAGCAGTCCCCAAGGAGGATATCTACTCCGGTGGGGGTGGAGGCGGCTCCCGATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS TCA 90 bp TCACTCGTCTGCACATTGAGGCCGCCGATGAACAGCTTACACAACTaGGAATTCTCCATCTCCAAGGCCCGGGCCTTGCCCCCGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SLVCTLRPPMNSLHN*EFSISKARALPPPC
Trigger: GCAGGGCGGGGGCAAGGCCCGGGCCTTGGAGATGGAGAATTCTCAGTTGTGTAAGCTGTTCATCGGCGGCCTCAATGTGCAGACGAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS TCA 90 bp ATATCCTCCTTGGGGACTGCTTTCTTCACCTCCACGCGATGGCCCTaGATCGGATGGAACTTGACCACCGCGGCCTTGTCTGCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: ISSLGTAFFTSTRWP*IGWNLTTAALSAAS
Trigger: CGACGCGGCAGACAAGGCCGCGGTGGTCAAGTTCCATCCGATTCAGGGCCATCGCGTGGAGGTGAAGAAAGCAGTCCCCAAGGAGGATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 90 bp GGAGCCGCCTCCACCCCCACCGGAGTAGATATCCTCCTTGGGGACTaGTTTCTTCACCTCCACGCGATGGCCCTGAATCGGATGGAACTT +
Preference number: 5 (lower is better)
Translates to: GAASTPTGVDILLGD*FLHLHAMALNRMEL
Trigger: AAGTTCCATCCGATTCAGGGCCATCGCGTGGAGGTGAAGAAAGCAGTCCCCAAGGAGGATATCTACTCCGGTGGGGGTGGAGGCGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 90 bp CCTCCACATTGGAGTAGGTCACGAAGCCAAAGCAACGGGAGCGCTTaGTCTGGGGATTCACCACCACCACGCAGTCCGTCAGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: PPHWSRSRSQSNGSA*SGDSPPPRSPSESQ
Trigger: TTGGGACTCTGACGGACTGCGTGGTGGTGGTGAATCCCCAGACCAAGCGCTCCCGTTGCTTTGGCTTCGTGACCTACTCCAATGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 90 bp TCGGCAATAATCTCGGCCTTTTCCACGGTGCCAAACTGCGAGAAGTaGTCGATCAGGTCGCCCTCAGCCACGTCTCCTTTAAGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: SAIISAFSTVPNCEK*SIRSPSATSPLRPP
Trigger: CGGAGGCCTTAAAGGAGACGTGGCTGAGGGCGACCTGATCGAGCACTTCTCGCAGTTTGGCACCGTGGAAAAGGCCGAGATTATTGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 90 bp GCGATGGCCCTGAATCGGATGGAACTTGACCACCGCGGCCTTGTCTaGCGCGTCGTGATTCTGGAAATACACGAAGCCGAATCCACGCTT +
Preference number: 5 (lower is better)
Translates to: AMALNRMELDHRGLV*RVVILEIHEAESTL
Trigger: AAGCGTGGATTCGGCTTCGTGTATTTCCAGAATCACGACGCGGCAGACAAGGCCGCGGTGGTCAAGTTCCATCCGATTCAGGGCCATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS TCA 90 bp CTGCTTTCTTCACCTCCACGCGATGGCCCTGAATCGGATGGAACTTaGCCACCGCGGCCTTGTCTGCCGCGTCGTGATTCTGGAAATACA +
Preference number: 5 (lower is better)
Translates to: LLSSPPRDGPESDGT*PPRPCLPRRDSGNT
Trigger: TGTATTTCCAGAATCACGACGCGGCAGACAAGGCCGCGGTGGTCAAGTTCCATCCGATTCAGGGCCATCGCGTGGAGGTGAAGAAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 90 bp GACTGCTTGTCGGCAATAATCTCGGCCTTTTCCACGGTGCCAAACTaGGAGAAGTGCTCGATCAGGTCGCCCTCAGCCACGTCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: DCLSAIISAFSTVPN*EKCSIRSPSATSPL
Trigger: TAAAGGAGACGTGGCTGAGGGCGACCTGATCGAGCACTTCTCGCAGTTTGGCACCGTGGAAAAGGCCGAGATTATTGCCGACAAGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTGCTTGGGCCCAGCCGTaGCTGGAGCCACCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: INWLRWRKTLSLSASAVFAWAQP*LEPPPP
Trigger: CGGCGGGGGTGGCTCCAGCAACGGCTGGGCCCAAGC...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACCGCCGCCGCCGCCCTaGGAAAGGCCGTTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLPPPPP*ERPFWS
Trigger: AGACCAGAACGGCCTTTCCAAGGGCGGCGGCGGCGG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAAGGCCTCTACACAGCTaGGGCCCAGCCGTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLRPLHS*GPAVAG
Trigger: TCCAGCAACGGCTGGGCCCAAGCTGTGTAGAGGCCT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGTTCAGCTCCACAGTGTaGCCGTCCACGGCATGGGGC +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLFSSTV*PSTAWG
Trigger: GCCCCATGCCGTGGACGGCAACACTGTGGAGCTGAA...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAAGAGCTTCTTAACCTaGGCGTGGGCACCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLKSFLT*AWAPGR
Trigger: GCGGCCCGGTGCCCACGCCAAGGTTAAGAAGCTCTT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAAGCAACGGGAGCGCTaGGTCTGGGGATTCACCACC +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLKQRER*VWGFTT
Trigger: GGTGGTGAATCCCCAGACCAAGCGCTCCCGTTGCTT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGCCGAATCCACGCTTCTaGCCGGACTGCTTGTCGGCA +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLPNPRF*PDCLSA
Trigger: TGCCGACAAGCAGTCCGGCAAGAAGCGTGGATTCGG...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGTCACTCGTCTGCACATaGAGGCCGCCGATGAACAGC +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLSLVCT*RPPMNS
Trigger: GCTGTTCATCGGCGGCCTCAATGTGCAGACGAGTGA...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGTCGCCGCCGTTATCGTaGGTTAAGGCCTCTACACAG +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLSPPLS*VKASTQ
Trigger: CTGTGTAGAGGCCTTAACCAACGATAACGGCGGCGA...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGTTCTTGCCGGACTGCTaGTCGGCAATAATCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLFLPDC*SAIISA
Trigger: GGCCGAGATTATTGCCGACAAGCAGTCCGGCAAGAA...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AAACCTTTAATGACTTTTACTGCCTACCCTAAGTCCAAACTCCTTAGCCTACTAACCAGCTGGGGGTCCTaGGGAGTTACTTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: KPLMTFTAYPKSKLLSLLTSWGS*GVTFLA
Trigger: TGCCAGAAAAGTAACTCCCAAGGACCCCCAGCTGGT...TAGTAGGCTAAGGAGTTTGGACTTAGGGTAGGCAGTAAAAGTCATTAAAGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAACCCCCACCCAGGTTTaGCTACAGAATCAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLTPTQV*LQNQQV
Trigger: AACTTGCTGATTCTGTAGCAAAACCTGGGTGGGGGT...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACCTCACAAACATCCCTaGCAACAATCGCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLPHKHP*QQSPFL
Trigger: GAGGAATGGCGATTGTTGCAAGGGATGTTTGTGAGG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCAGCAAACTTGCCACTTaGAAACATCCCCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCSKLAT*KHPPLP
Trigger: TGGCAGTGGGGGATGTTTCAAAGTGGCAAGTTTGCT...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAAAACATACAACCAATaGTCCCTCCTCCCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLKTYNQ*SLLPKS
Trigger: GGACTTGGGGAGGAGGGACAATTGGTTGTATGTTTT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGGCTAGATCTTCACGTTaGGTGGTGTGGGAAGATCAA +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLARSSR*VVWEDQ
Trigger: TTGATCTTCCCACACCACCAAACGTGAAGATCTAGC...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTTTGACTAGGCAGTCTTaGTTGCTGTTTCAAAAGGCC +
Preference number: 5 (lower is better)
Translates to: INWLRWRKTLSLSASAVFLTRQS*LLFQKA
Trigger: GGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAA...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCTATGCAGTTCTTTATTaGTCAGCCTCCCAGGAACAC +
Preference number: 5 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCYAVLY*SASQEH
Trigger: GTGTTCCTGGGAGGCTGACAAATAAAGAACTGCATA...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGACAACCCTGAACAATTaGCATTTCTTCAGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLTTLNN*HFFRGQ
Trigger: CTGGCCTCTGAAGAAATGCAAATTGTTCAGGGTTGT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp ATAAATTGGTTACGATGGAGAAAGACACTTAGCCTAAGTGCAAGTGCTGTCTTTACTAGGCAGTCTTTGTaGCTGTTTCAAAAGGCCAAA +
Preference number: 5 (lower is better)
Translates to: INWLRWRKTLSLSASAVFTRQSL*LFQKAK
Trigger: TTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGT...AAAGACAGCACTTGCACTTAGGCTAAGTGTCTTTCTCCATCGTAACCAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCCAGCTAAGGAGTTATTaGACTAGGCAGTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCQLRSY*TRQSLL
Trigger: CAACAAAGACTGCCTAGTCAAATAACTCCTTAGCTG...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTAACAGAATTTGGTCTATaGGATGCCCAAATTTACGTC +
Preference number: 5 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLTEFGL*DAQIYV
Trigger: GACGTAAATTTGGGCATCCAATAGACCAAATTCTGT...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGATAAAAGTATGCCTTTaGCTAGTCTGTCCCACCTCT +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLIKVCL*LVCPTS
Trigger: AGAGGTGGGACAGACTAGCAAAAGGCATACTTTTAT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp TCTTCCTACCTGAAGTCACCTCTCCTCAACACTCACATTATTTATACCTTCCTACCATCACTTCTGGTTTaGAAGGAAATCATAAATGCA +
Preference number: 5 (lower is better)
Translates to: SSYLKSPLLNTHIIYTFLPSLLV*KEIINA
Trigger: TGCATTTATGATTTCCTTCAAAACCAGAAGTGATGG...TAGGAAGGTATAAATAATGTGAGTGTTGAGGAGAGGTGACTTCAGGTAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCAAGTTTTTAAACAAATaGTTTCGCAGCTACTCTGCC +
Preference number: 5 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCKFLNK*FRSYSA
Trigger: GGCAGAGTAGCTGCGAAACAATTTGTTTAAAAACTT...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp ACATTCAAGCATGGCACAAAAATTATATTCAACACTAGGTTCTGTACCACCTGCTTGGATTTTACATTTTaGTATGAGAGCTGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: TFKHGTKIIFNTRFCTTCLDFTF*YESCSA
Trigger: AGCTGAGCAGCTCTCATACAAAAATGTAAAATCCAA...GCAGGTGGTACAGAACCTAGTGTTGAATATAATTTTTGTGCCATGCTTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGTATTTCCATTGCTCTTaGTTCATGCTCTCATTCTCT +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLYFHCS*FMLSFS
Trigger: AGAGAATGAGAGCATGAACAAAGAGCAATGGAAATA...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS-3UTR CAA 90 bp AGTTATTTGACTAGGCAGTCTTTGTTGCTGTTTCAAAAGGCCAAAATAAGGCTGAATTCAAGATTCATTTaGGCCAAAAAGCAGCATCTC +
Preference number: 5 (lower is better)
Translates to: SYLTRQSLLLFQKAKIRLNSRFI*AKKQHL
Trigger: GAGATGCTGCTTTTTGGCCAAAATGAATCTTGAATT...CAGCCTTATTTTGGCCTTTTGAAACAGCAACAAAGACTGCCTAGTCAAATAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 90 bp CGCGCCGAATCCTCCCGGGACACCGCCCGCTTCAGCTCCACAGTGTaGCCGTCCACGGCATGGGGCGAGGCGGCCATGGCGGCGTCCGCC +
Preference number: 6 (lower is better)
Translates to: RAESSRDTARFSSTV*PSTAWGEAAMAASA
Trigger: GGCGGACGCCGCCATGGCCGCCTCGCCCCATGCCGTGGACGGCAACACTGTGGAGCTGAAGCGGGCGGTGTCCCGGGAGGATTCGGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp CCTCCCGGGACACCGCCCGCTTCAGCTCCACAGTGTTaGCGTCCACGGCATGGGGCGAGGCGGCCATGGCGG +
Preference number: 6 (lower is better)
Translates to: PPGTPPASAPQC*RPRHGARRPWR
Trigger: CCGCCATGGCCGCCTCGCCCCATGCCGTGGACGGCAACACTGTGGAGCTGAAGCGGGCGGTGTCCCGGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 72 bp TCCTCCCGGGACACCGCCCGCTTCAGCTCCACAGTGTaGCCGTCCACGGCATGGGGCGAGGCGGCCATGGCG +
Preference number: 6 (lower is better)
Translates to: SSRDTARFSSTV*PSTAWGEAAMA
Trigger: CGCCATGGCCGCCTCGCCCCATGCCGTGGACGGCAACACTGTGGAGCTGAAGCGGGCGGTGTCCCGGGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp TTCTCCATCTCCAAGGCCCGGGCCTTGCCCCCGCCCTaGGAGCTCCGAGGTTTCGCCGTCGCCGCCGTTATC +
Preference number: 6 (lower is better)
Translates to: FSISKARALPPP*ELRGFAVAAVI
Trigger: GATAACGGCGGCGACGGCGAAACCTCGGAGCTCGCAGGGCGGGGGCAAGGCCCGGGCCTTGGAGATGGAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 72 bp GTTAAGGCCTCTACACAGCTTGGGCCCAGCCGTTGCTaGAGCCACCCCCGCCGCTCACCGACGGGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: VKASTQLGPSRC*SHPRRSPTGKG
Trigger: TCCCTTCCCCGTCGGTGAGCGGCGGGGGTGGCTCCAGCAACGGCTGGGCCCAAGCTGTGTAGAGGCCTTAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 72 bp CAGTGTTGCCGTCCACGGCATGGGGCGAGGCGGCCATaGCGGCGTCCGCCTCCTCCACATTGGAGTAGGTCA +
Preference number: 6 (lower is better)
Translates to: QCCRPRHGARRP*RRPPPPHWSRS
Trigger: TGACCTACTCCAATGTGGAGGAGGCGGACGCCGCCATGGCCGCCTCGCCCCATGCCGTGGACGGCAACACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 72 bp AACCACCGTAGCTGTTGTAACCGCCGCCGCCGCCCTTaGAAAGGCCGTTCTGGTCTCGACCACCGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: NHRSCCNRRRRP*KGRSGLDHRRA
Trigger: GGCGCGGCGGTGGTCGAGACCAGAACGGCCTTTCCAAGGGCGGCGGCGGCGGTTACAACAGCTACGGTGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 72 bp TACTGCCTCCACCGCCGCCGCCGCCGCCGCTCTTCATaGGCCCATAGGAGGACTGATGCTGGCTGTAGCTGC +
Preference number: 6 (lower is better)
Translates to: YCLHRRRRRRSS*AHRRTDAGCSC
Trigger: GCAGCTACAGCCAGCATCAGTCCTCCTATGGGCCCATGAAGAGCGGCGGCGGCGGCGGCGGTGGAGGCAGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 90 bp TTTCGCCGTCGCCGCCGTTATCGTTGGTTAAGGCCTCTACACAGCTaGGGCCCAGCCGTTGCTGGAGCCACCCCCGCCGCTCACCGACGG +
Preference number: 6 (lower is better)
Translates to: FRRRRRYRWLRPLHS*GPAVAGATPAAHRR
Trigger: CCGTCGGTGAGCGGCGGGGGTGGCTCCAGCAACGGCTGGGCCCAAGCTGTGTAGAGGCCTTAACCAACGATAACGGCGGCGACGGCGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 90 bp CCCCGCCCTGCGAGCTCCGAGGTTTCGCCGTCGCCGCCGTTATCGTaGGTTAAGGCCTCTACACAGCTTGGGCCCAGCCGTTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PRPASSEVSPSPPLS*VKASTQLGPSRCWS
Trigger: GCTCCAGCAACGGCTGGGCCCAAGCTGTGTAGAGGCCTTAACCAACGATAACGGCGGCGACGGCGAAACCTCGGAGCTCGCAGGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp TTGGTTAAGGCCTCTACACAGCTTGGGCCCAGCCGTTaGTGGAGCCACCCCCGCCGCTCACCGACGGGGAAG +
Preference number: 6 (lower is better)
Translates to: LVKASTQLGPSR*WSHPRRSPTGK
Trigger: CTTCCCCGTCGGTGAGCGGCGGGGGTGGCTCCAGCAACGGCTGGGCCCAAGCTGTGTAGAGGCCTTAACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp TGTAAGGTCCACTATTACTGCGACCGCCCCAGCTACTaGCTCCACCGCCGCCGCCGCCGCCGCTCTTCATGG +
Preference number: 6 (lower is better)
Translates to: CKVHYYCDRPSY*LHRRRRRRSSW
Trigger: CCATGAAGAGCGGCGGCGGCGGCGGCGGTGGAGGCAGTAGCTGGGGCGGTCGCAGTAATAGTGGACCTTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 72 bp CGCCGCCGTTATCGTTGGTTAAGGCCTCTACACAGCTaGGGCCCAGCCGTTGCTGGAGCCACCCCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: RRRYRWLRPLHS*GPAVAGATPAA
Trigger: AGCGGCGGGGGTGGCTCCAGCAACGGCTGGGCCCAAGCTGTGTAGAGGCCTTAACCAACGATAACGGCGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp ACAACTGAGAATTCTCCATCTCCAAGGCCCGGGCCTTaGCCCCGCCCTGCGAGCTCCGAGGTTTCGCCGTCG +
Preference number: 6 (lower is better)
Translates to: TTENSPSPRPGP*PRPASSEVSPS
Trigger: CGACGGCGAAACCTCGGAGCTCGCAGGGCGGGGGCAAGGCCCGGGCCTTGGAGATGGAGAATTCTCAGTTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 90 bp TCAGCCACGTCTCCTTTAAGGCCTCCGACAAAGAGCTTCTTAACCTaGGCGTGGGCACCGGGCCGCGCCGAATCCTCCCGGGACACCGCC +
Preference number: 6 (lower is better)
Translates to: SATSPLRPPTKSFLT*AWAPGRAESSRDTA
Trigger: GGCGGTGTCCCGGGAGGATTCGGCGCGGCCCGGTGCCCACGCCAAGGTTAAGAAGCTCTTTGTCGGAGGCCTTAAAGGAGACGTGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 72 bp TTAAGGCCTCCGACAAAGAGCTTCTTAACCTTGGCGTaGGCACCGGGCCGCGCCGAATCCTCCCGGGACACC +
Preference number: 6 (lower is better)
Translates to: LRPPTKSFLTLA*APGRAESSRDT
Trigger: GGTGTCCCGGGAGGATTCGGCGCGGCCCGGTGCCCACGCCAAGGTTAAGAAGCTCTTTGTCGGAGGCCTTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 72 bp GCGAGCTCCGAGGTTTCGCCGTCGCCGCCGTTATCGTaGGTTAAGGCCTCTACACAGCTTGGGCCCAGCCGT +
Preference number: 6 (lower is better)
Translates to: ASSEVSPSPPLS*VKASTQLGPSR
Trigger: ACGGCTGGGCCCAAGCTGTGTAGAGGCCTTAACCAACGATAACGGCGGCGACGGCGAAACCTCGGAGCTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 72 bp CGAGCTCCGAGGTTTCGCCGTCGCCGCCGTTATCGTTaGTTAAGGCCTCTACACAGCTTGGGCCCAGCCGTT +
Preference number: 6 (lower is better)
Translates to: RAPRFRRRRRYR*LRPLHSLGPAV
Trigger: AACGGCTGGGCCCAAGCTGTGTAGAGGCCTTAACCAACGATAACGGCGGCGACGGCGAAACCTCGGAGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 72 bp ACCACGCAGTCCGTCAGAGTCCCAAAGGCCTCAAAGTaGCCGCGCAGGCCCGACTCACTCGTCTGCACATTG +
Preference number: 6 (lower is better)
Translates to: TTQSVRVPKASK*PRRPDSLVCTL
Trigger: CAATGTGCAGACGAGTGAGTCGGGCCTGCGCGGCCACTTTGAGGCCTTTGGGACTCTGACGGACTGCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 72 bp AGCCGCCTCCACCCCCACCGGAGTAGATATCCTCCTTaGGGACTGCTTTCTTCACCTCCACGCGATGGCCCT +
Preference number: 6 (lower is better)
Translates to: SRLHPHRSRYPP*GLLSSPPRDGP
Trigger: AGGGCCATCGCGTGGAGGTGAAGAAAGCAGTCCCCAAGGAGGATATCTACTCCGGTGGGGGTGGAGGCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 72 bp TCTCCTTTAAGGCCTCCGACAAAGAGCTTCTTAACCTaGGCGTGGGCACCGGGCCGCGCCGAATCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: SPLRPPTKSFLT*AWAPGRAESSR
Trigger: CCGGGAGGATTCGGCGCGGCCCGGTGCCCACGCCAAGGTTAAGAAGCTCTTTGTCGGAGGCCTTAAAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS TCA 72 bp TCACCTCCACGCGATGGCCCTGAATCGGATGGAACTTaGCCACCGCGGCCTTGTCTGCCGCGTCGTGATTCT +
Preference number: 6 (lower is better)
Translates to: SPPRDGPESDGT*PPRPCLPRRDS
Trigger: AGAATCACGACGCGGCAGACAAGGCCGCGGTGGTCAAGTTCCATCCGATTCAGGGCCATCGCGTGGAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp GCCTCAAAGTGGCCGCGCAGGCCCGACTCACTCGTCTaGACATTGAGGCCGCCGATGAACAGCTTACACAAC +
Preference number: 6 (lower is better)
Translates to: ASKWPRRPDSLV*TLRPPMNSLHN
Trigger: GTTGTGTAAGCTGTTCATCGGCGGCCTCAATGTGCAGACGAGTGAGTCGGGCCTGCGCGGCCACTTTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp TCCACCCCCACCGGAGTAGATATCCTCCTTGGGGACTaGTTTCTTCACCTCCACGCGATGGCCCTGAATCGG +
Preference number: 6 (lower is better)
Translates to: STPTGVDILLGD*FLHLHAMALNR
Trigger: CCGATTCAGGGCCATCGCGTGGAGGTGAAGAAAGCAGTCCCCAAGGAGGATATCTACTCCGGTGGGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CCA 72 bp TGGAGTAGGTCACGAAGCCAAAGCAACGGGAGCGCTTaGTCTGGGGATTCACCACCACCACGCAGTCCGTCA +
Preference number: 6 (lower is better)
Translates to: WSRSRSQSNGSA*SGDSPPPRSPS
Trigger: TGACGGACTGCGTGGTGGTGGTGAATCCCCAGACCAAGCGCTCCCGTTGCTTTGGCTTCGTGACCTACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS TCA 72 bp TTGGGGACTGCTTTCTTCACCTCCACGCGATGGCCCTaGATCGGATGGAACTTGACCACCGCGGCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: LGTAFFTSTRWP*IGWNLTTAALS
Trigger: AGACAAGGCCGCGGTGGTCAAGTTCCATCCGATTCAGGGCCATCGCGTGGAGGTGAAGAAAGCAGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp TCGGCAATAATCTCGGCCTTTTCCACGGTGCCAAACTaGGAGAAGTGCTCGATCAGGTCGCCCTCAGCCACG +
Preference number: 6 (lower is better)
Translates to: SAIISAFSTVPN*EKCSIRSPSAT
Trigger: CGTGGCTGAGGGCGACCTGATCGAGCACTTCTCGCAGTTTGGCACCGTGGAAAAGGCCGAGATTATTGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS TCA 72 bp TGCACATTGAGGCCGCCGATGAACAGCTTACACAACTaGGAATTCTCCATCTCCAAGGCCCGGGCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: CTLRPPMNSLHN*EFSISKARALP
Trigger: GGGCAAGGCCCGGGCCTTGGAGATGGAGAATTCTCAGTTGTGTAAGCTGTTCATCGGCGGCCTCAATGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS TCA 72 bp TGGAACTTGACCACCGCGGCCTTGTCTGCCGCGTCGTaGTTCTGGAAATACACGAAGCCGAATCCACGCTTC +
Preference number: 6 (lower is better)
Translates to: WNLTTAALSAAS*FWKYTKPNPRF
Trigger: GAAGCGTGGATTCGGCTTCGTGTATTTCCAGAATCACGACGCGGCAGACAAGGCCGCGGTGGTCAAGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp ATCTCGGCCTTTTCCACGGTGCCAAACTGCGAGAAGTaGTCGATCAGGTCGCCCTCAGCCACGTCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: ISAFSTVPNCEK*SIRSPSATSPL
Trigger: TAAAGGAGACGTGGCTGAGGGCGACCTGATCGAGCACTTCTCGCAGTTTGGCACCGTGGAAAAGGCCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp CTGAATCGGATGGAACTTGACCACCGCGGCCTTGTCTaGCGCGTCGTGATTCTGGAAATACACGAAGCCGAA +
Preference number: 6 (lower is better)
Translates to: LNRMELDHRGLV*RVVILEIHEAE
Trigger: TTCGGCTTCGTGTATTTCCAGAATCACGACGCGGCAGACAAGGCCGCGGTGGTCAAGTTCCATCCGATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 72 bp TACACGAAGCCGAATCCACGCTTCTTGCCGGACTGCTaGTCGGCAATAATCTCGGCCTTTTCCACGGTGCCA +
Preference number: 6 (lower is better)
Translates to: YTKPNPRFLPDC*SAIISAFSTVP
Trigger: TGGCACCGTGGAAAAGGCCGAGATTATTGCCGACAAGCAGTCCGGCAAGAAGCGTGGATTCGGCTTCGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS CAA 90 bp TTCTGGAAATACACGAAGCCGAATCCACGCTTCTTGCCGGACTGCTaGTCGGCAATAATCTCGGCCTTTTCCACGGTGCCAAACTGCGAG +
Preference number: 6 (lower is better)
Translates to: FWKYTKPNPRFLPDC*SAIISAFSTVPNCE
Trigger: CTCGCAGTTTGGCACCGTGGAAAAGGCCGAGATTATTGCCGACAAGCAGTCCGGCAAGAAGCGTGGATTCGGCTTCGTGTATTTCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7
CDS GCA 72 bp AAATACACGAAGCCGAATCCACGCTTCTTGCCGGACTaGTTGTCGGCAATAATCTCGGCCTTTTCCACGGTG +
Preference number: 6 (lower is better)
Translates to: KYTKPNPRFLPD*LSAIISAFSTV
Trigger: CACCGTGGAAAAGGCCGAGATTATTGCCGACAAGCAGTCCGGCAAGAAGCGTGGATTCGGCTTCGTGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314940.7