RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HNF4A (Homo sapiens)

Ensembl gene IDs: ENSG00000101076

Ensembl transcript IDs: ENST00000316099.9, ENST00000316673.8, ENST00000372920.1, ENST00000415691.2, ENST00000443598.6, ENST00000457232.5, ENST00000609262.5, ENST00000609795.5, ENST00000619550.4, ENST00000619550.5, ENST00000681977.1, ENST00000682169.1, ENST00000682427.1, ENST00000683148.1, ENST00000683657.1, ENST00000684046.1, ENST00000684136.1, ENST00000684476.1

Found 987 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGCAGCTCCTGGAAGGGCAGCACCAGCTCGTCAAGGATGCGTATaGACACCCGGCTCATCTCCGCCAGCTCCGGGCAGTGCCGAGGGA +
Preference number: 1 (lower is better)
Translates to: SAAPGRAAPARQGCV*TPGSSPPAPGSAEG
Trigger: TCCCTCGGCACTGCCCGGAGCTGGCGGAGATGAGCCGGGTGTCCATACGCATCCTTGACGAGCTGGTGCTGCCCTTCCAGGAGCTGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR GCA 90 bp CATCGATCTGCAGCTCCTGGAAGGGCAGCACCAGCTCGTCAAGGATaGGTATGGACACCCGGCTCATCTCCGCCAGCTCCGGGCAGTGCC +
Preference number: 1 (lower is better)
Translates to: HRSAAPGRAAPARQG*VWTPGSSPPAPGSA
Trigger: GGCACTGCCCGGAGCTGGCGGAGATGAGCCGGGTGTCCATACGCATCCTTGACGAGCTGGTGCTGCCCTTCCAGGAGCTGCAGATCGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CCA 90 bp GACGGGATGGCTGAGCAAGGTGACAGCAGAGGGAGGCAGCAGAGGTaGGGGCAGCAGCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACA +
Preference number: 1 (lower is better)
Translates to: DGMAEQGDSRGRQQR*GQQQKEEQGAPSAT
Trigger: TGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGCTGCTGCCCCCACCTCTGCTGCCTCCCTCTGCTGTCACCTTGCTCAGCCATCCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR TCA 90 bp GGTCGCTCCATCCTGGGGTCTAATGCTTCCAGAATGCACCTGGAGTaGCGGTCTCCGGAGCAGCCCTCAAACCCAGGCCTGCTTAGCCCT +
Preference number: 1 (lower is better)
Translates to: GRSILGSNASRMHLE*RSPEQPSNPGLLSP
Trigger: AGGGCTAAGCAGGCCTGGGTTTGAGGGCTGCTCCGGAGACCGTCACTCCAGGTGCATTCTGGAAGCATTAGACCCCAGGATGGAGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 90 bp TGCCCAGAAATGGTTCCAGCCTCCCTGCCTTACCGCAGACCAGGCTaGGCCGTCTGGCAGGGATTTCAGGGGCACTTGAGTGAGGTGGTG +
Preference number: 1 (lower is better)
Translates to: CPEMVPASLPYRRPG*AVWQGFQGHLSEVV
Trigger: CACCACCTCACTCAAGTGCCCCTGAAATCCCTGCCAGACGGCTCAGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCATTTCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 90 bp CTGCAGGAGCGCATTGATGGAGGGCAGGCTGCTGTCCTCATAGCTTaGCCTTCGAGTGCTGATCCGGTCCCGCTCATTCTGGACGGCTTC +
Preference number: 1 (lower is better)
Translates to: LQERIDGGQAAVLIA*PSSADPVPLILDGF
Trigger: GAAGCCGTCCAGAATGAGCGGGACCGGATCAGCACTCGAAGGTCAAGCTATGAGGACAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR GCA 90 bp TTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTaGCGTGACCACGTGATCACCAGGTGCTCTCTTAGGGGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: FPFLLWDWSWHHVFL*RDHVITRCSLRGLG
Trigger: CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR GCA 90 bp GTGGCCCTTAGGCCATGTTCTCGGGCCCTTCATCCTTCCCATTCCTaGTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACC +
Preference number: 1 (lower is better)
Translates to: VALRPCSRALHPSHS*SGTGPGITSSFAVT
Trigger: GGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATGAAGGGCCCGAGAACATGGCCTAAGGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR GCA 90 bp GATGACATGCTGGTCGCTCCATCCTGGGGTCTAATGCTTCCAGAATaGACCTGGAGTGACGGTCTCCGGAGCAGCCCTCAAACCCAGGCC +
Preference number: 1 (lower is better)
Translates to: DDMLVAPSWGLMLPE*TWSDGLRSSPQTQA
Trigger: GGCCTGGGTTTGAGGGCTGCTCCGGAGACCGTCACTCCAGGTGCATTCTGGAAGCATTAGACCCCAGGATGGAGCGACCAGCATGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 90 bp GGTCCTGGGAGTGGGCAGGGTTCCCAGAAGAACGAGTCTGGTTTCTaGGGCTGTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGT +
Preference number: 1 (lower is better)
Translates to: GPGSGQGSQKNESGF*GCRREPEAPQLDHG
Trigger: ACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAACCCTGCCCACTCCCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR TCA 90 bp TCCGCTGGGATTGGGGGCTTGGCTGGGACTGCCGTAGGGATGTGGTaGTTCCTCCCTGACACATTGCCCCAATACTTCTCCACGCCTCTT +
Preference number: 1 (lower is better)
Translates to: SAGIGGLAGTAVGMW*FLPDTLPQYFSTPL
Trigger: AAGAGGCGTGGAGAAGTATTGGGGCAATGTGTCAGGGAGGAATCACCACATCCCTACGGCAGTCCCAGCCAAGCCCCCAATCCCAGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR GCA 90 bp CCCCACCTGACCTCCCAGCTTCCAGCCTCCCGTCCTCTGCAGAACTaGTGTGTTCATTTTCTGGAAGCCCAGCTCCCTGCATACTCCTTG +
Preference number: 1 (lower is better)
Translates to: PHLTSQLPASRPLQN*CVHFLEAQLPAYSL
Trigger: CAAGGAGTATGCAGGGAGCTGGGCTTCCAGAAAATGAACACAGCAGTTCTGCAGAGGACGGGAGGCTGGAAGCTGGGAGGTCAGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR GCA 90 bp CACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTaGCTTACCGCAGACCAGGCTGAGCCGTCTGGCAGGGATTTCAGG +
Preference number: 1 (lower is better)
Translates to: HSGNDHNAQKWFQPP*LTADQAEPSGRDFR
Trigger: CCTGAAATCCCTGCCAGACGGCTCAGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR GCA 90 bp AGCTTGATGAACTGGATCTGCTCGATCATCTGCCAGGTGATGCTCTaGAAGGTGGGCAGCAGCAGCAGCAGCTCTCCAAAGCGGCCACGC +
Preference number: 1 (lower is better)
Translates to: SLMNWICSIICQVML*KVGSSSSSSPKRPR
Trigger: GCGTGGCCGCTTTGGAGAGCTGCTGCTGCTGCTGCCCACCTTGCAGAGCATCACCTGGCAGATGATCGAGCAGATCCAGTTCATCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CCA 90 bp GCCCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTaGTGTTCCAGACCCTATGCTCTCCAGCAGGCCCTCTCTCTCTTC +
Preference number: 1 (lower is better)
Translates to: AQLPAYSLKLIRTSA*CSRPYALQQALSLF
Trigger: GAAGAGAGAGAGGGCCTGCTGGAGAGCATAGGGTCTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 90 bp ATGCTGGTCGCTCCATCCTGGGGTCTAATGCTTCCAGAATGCACCTaGAGTGACGGTCTCCGGAGCAGCCCTCAAACCCAGGCCTGCTTA +
Preference number: 1 (lower is better)
Translates to: MLVAPSWGLMLPECT*SDGLRSSPQTQACL
Trigger: TAAGCAGGCCTGGGTTTGAGGGCTGCTCCGGAGACCGTCACTCCAGGTGCATTCTGGAAGCATTAGACCCCAGGATGGAGCGACCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CCA 90 bp GAGGAGGTGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATaGTTCCAGCCTCCCTGCCTTACCGCAGACCAGGCTGAGCCGTCT +
Preference number: 1 (lower is better)
Translates to: EEVEEHSGNDHNAQK*FQPPCLTADQAEPS
Trigger: AGACGGCTCAGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCACCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CCA 90 bp CTCCAAGCTCACCTGCACCTGGGAACGCAGCCGCTTGATCTTCCCTaGATCGCTCAGCCCCTTGGCATCTGGGTCAAAGAAGATGATGGC +
Preference number: 1 (lower is better)
Translates to: LQAHLHLGTQPLDLP*IAQPLGIWVKEDDG
Trigger: GCCATCATCTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCCAGGTGCAGGTGAGCTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR TCA 90 bp GCCTGGTGCCTGGTCCCAGTCAGTGCTTACAACATGTTCCCAGAATaGCTGGGGGAATCGTTTCCAAGGCCTCCTTGGCCTCTGGAGAGG +
Preference number: 1 (lower is better)
Translates to: AWCLVPVSAYNMFPE*LGESFPRPPWPLER
Trigger: CCTCTCCAGAGGCCAAGGAGGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACTGGGACCAGGCACCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 90 bp TCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCTCCTTGGCCTCTaGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGGTGAC +
Preference number: 1 (lower is better)
Translates to: SQNDWGNRFQGLLGL*RGGVGEDGMAEQGD
Trigger: GTCACCTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAACGATTCCCCCAGTCATTCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 90 bp AACAGTCAGTTCTCACAAGCCAGCTCCAGCACAACCCCGAGTGAATaGAACGCTGTGGTCTGTGGTGACCGAGACACAAGGCCACCCTCC +
Preference number: 1 (lower is better)
Translates to: NSQFSQASSSTTPSE*NAVVCGDRDTRPPS
Trigger: GGAGGGTGGCCTTGTGTCTCGGTCACCACAGACCACAGCGTTCCATTCACTCGGGGTTGTGCTGGAGCTGGCTTGTGAGAACTGACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 90 bp GTTGGAGGAGAAAGGCGTCTTCCCTCACCACAGCCTTCTAGACCCTaGCTGGTGCCTGGTCCCAGTCAGTGCTTACAACATGTTCCCAGA +
Preference number: 1 (lower is better)
Translates to: VGGERRLPSPQPSRP*LVPGPSQCLQHVPR
Trigger: TCTGGGAACATGTTGTAAGCACTGACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTGTGGTGAGGGAAGACGCCTTTCTCCTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 90 bp AAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGATGTaGCCCTTAGGCCATGTTCTCGGGCCCTTCATCCTTCCCATTCCT +
Preference number: 1 (lower is better)
Translates to: KSCYPEQGVKGGSGM*PLGHVLGPFILPIP
Trigger: AGGAATGGGAAGGATGAAGGGCCCGAGAACATGGCCTAAGGGCCACATCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 90 bp CAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTaGGATGTGGCCCTTAGGCCATGTTCTCGGGCCCTTCATCCTTCC +
Preference number: 1 (lower is better)
Translates to: QVKVLLSRAGRQGWQ*DVALRPCSRALHPS
Trigger: GGAAGGATGAAGGGCCCGAGAACATGGCCTAAGGGCCACATCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 90 bp GGTGCCTGGTCCCAGTCAGTGCTTACAACATGTTCCCAGAATGACTaGGGGAATCGTTTCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGT +
Preference number: 1 (lower is better)
Translates to: GAWSQSVLTTCSQND*GNRFQGLLGLWRGG
Trigger: ACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACTGGGACCAGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR TCA 90 bp CCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTaGAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCT +
Preference number: 1 (lower is better)
Translates to: PSSCCSRQPGFVFSG*RPSGILTQVPTQVP
Trigger: AGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR TCA 90 bp AGCTTGAGACAGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTaGTGTGAGGGTTTACCCATCTTGTCCTCTCCAGCCCCAAGCCTC +
Preference number: 1 (lower is better)
Translates to: SLRQALGAYSSWMSL*CEGLPILSSPAPSL
Trigger: GAGGCTTGGGGCTGGAGAGGACAAGATGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCTGTCTCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR TCA 90 bp GGCGGGAGCGGCCCTAGGGATCAGGTAGACAGCGAATGGGTGCTCTaGAGCCTGGAGAGTTTAATGGTTAACTTCTCGCTAAAAAGGGGC +
Preference number: 1 (lower is better)
Translates to: GGSGPRDQVDSEWVL*SLESLMVNFSLKRG
Trigger: GCCCCTTTTTAGCGAGAAGTTAACCATTAAACTCTCCAGGCTTCAGAGCACCCATTCGCTGTCTACCTGATCCCTAGGGCCGCTCCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 90 bp CTCAACGAGAACCAGCAGCTGCTCCTTCATGGACTCACACACATCTaGGATGCTGGCAATCTTCTTCGCCCGAATGTCGCCGTTGATCCC +
Preference number: 1 (lower is better)
Translates to: LNENQQLLLHGLTHI*DAGNLLRPNVAVDP
Trigger: GGGATCAACGGCGACATTCGGGCGAAGAAGATTGCCAGCATCGCAGATGTGTGTGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CCA 90 bp AAGCCACCAAGATTCCACATGGATGACATGCTGGTCGCTCCATCCTaGGGTCTAATGCTTCCAGAATGCACCTGGAGTGACGGTCTCCGG +
Preference number: 1 (lower is better)
Translates to: KPPRFHMDDMLVAPS*GLMLPECTWSDGLR
Trigger: CCGGAGACCGTCACTCCAGGTGCATTCTGGAAGCATTAGACCCCAGGATGGAGCGACCAGCATGTCATCCATGTGGAATCTTGGTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CCA 90 bp TCTCACAAGCCAGCTCCAGCACAACCCCGAGTGAATGGAACGCTGTaGTCTGTGGTGACCGAGACACAAGGCCACCCTCCTGTAATAGTT +
Preference number: 1 (lower is better)
Translates to: SHKPAPAQPRVNGTL*SVVTETQGHPPVIV
Trigger: AACTATTACAGGAGGGTGGCCTTGTGTCTCGGTCACCACAGACCACAGCGTTCCATTCACTCGGGGTTGTGCTGGAGCTGGCTTGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR TCA 90 bp GAGACAGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTaGGGGTTTACCCATCTTGTCCTCTCCAGCCCCAAGCCTCATTAC +
Preference number: 1 (lower is better)
Translates to: ETGPGSLFLLDVTLM*GFTHLVLSSPKPHY
Trigger: GTAATGAGGCTTGGGGCTGGAGAGGACAAGATGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR TCA 90 bp ATTCCCAGCAGAGAACTGACCCCCTGCTCCAACAGATTGTTCCCATaGAGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATC +
Preference number: 1 (lower is better)
Translates to: IPSRELTPCSNRLFP*RATVAHGTPWDILI
Trigger: GATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCTTCATGGGAACAATCTGTTGGAGCAGGGGGTCAGTTCTCTGCTGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 90 bp CCTCTGTCCACTCTCAGGAGAGCCATGCGGATTTTTAGAAGCTCCTaGGACCCGCCTGAAGATCAGGGTGTCTTGGTGGGGAAATTGTGC +
Preference number: 1 (lower is better)
Translates to: PLSTLRRAMRIFRSS*DPPEDQGVLVGKLC
Trigger: GCACAATTTCCCCACCAAGACACCCTGATCTTCAGGCGGGTCTCAGGAGCTTCTAAAAATCCGCATGGCTCTCCTGAGAGTGGACAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR GCA 90 bp TCACCACAGCCTTCTAGACCCTGCCTGGTGCCTGGTCCCAGTCAGTaGTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAG +
Preference number: 1 (lower is better)
Translates to: SPQPSRPCLVPGPSQ*LQHVPRMTGGIVSK
Trigger: CTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTGTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR GCA 90 bp ACTGACCCCCTGCTCCAACAGATTGTTCCCATGAAGGGCCACTGTTaGCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCC +
Preference number: 1 (lower is better)
Translates to: TDPLLQQIVPMKGHC*PRHSMGHSYLNLSP
Trigger: GGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCTTCATGGGAACAATCTGTTGGAGCAGGGGGTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 90 bp GAATGGGTTTCTCCTCCAGAAAGGGGTAGATTCCCAGCAGAGAACTaGCCCCCTGCTCCAACAGATTGTTCCCATGAAGGGCCACTGTTG +
Preference number: 1 (lower is better)
Translates to: EWVSPPERGRFPAEN*PPAPTDCSHEGPLL
Trigger: CAACAGTGGCCCTTCATGGGAACAATCTGTTGGAGCAGGGGGTCAGTTCTCTGCTGGGAATCTACCCCTTTCTGGAGGAGAAACCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 90 bp AGGCATCCCATGGTCCAGCCATTGCCGAATGCTGTGGTGTGCTGGTaGATGTTAACAACGGGCTCTCCAGGAACAAAAGCCCGGATTTGT +
Preference number: 1 (lower is better)
Translates to: RHPMVQPLPNAVVCW*MLTTGSPGTKARIC
Trigger: ACAAATCCGGGCTTTTGTTCCTGGAGAGCCCGTTGTTAACATTCACCAGCACACCACAGCATTCGGCAATGGCTGGACCATGGGATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 90 bp TCCTCTGCAGAACTGCTGTGTTCATTTTCTGGAAGCCCAGCTCCCTaGATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAG +
Preference number: 1 (lower is better)
Translates to: SSAELLCSFSGSPAP*ILLEADQDLSLVFQ
Trigger: CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGGGCTTCCAGAAAATGAACACAGCAGTTCTGCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR GCA 90 bp CAGAAAGCTGGGATGTACTTGGCCCACTCAACGAGAACCAGCAGCTaGTCCTTCATGGACTCACACACATCTGCGATGCTGGCAATCTTC +
Preference number: 1 (lower is better)
Translates to: QKAGMYLAHSTRTSS*SFMDSHTSAMLAIF
Trigger: GAAGATTGCCAGCATCGCAGATGTGTGTGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CCA 90 bp GATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTaGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCA +
Preference number: 1 (lower is better)
Translates to: DAFPLHSKFLLQSPT*VCFLGLKAFRDPHP
Trigger: TGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR TCA 90 bp GGAGATATCATTCCCACTTTACAGATGAGGCTCGGAGTGGTGGAGTaGCCTGCCCAAGGTTACGCTGATCAGCAAAACGTGTGCTTCCCA +
Preference number: 1 (lower is better)
Translates to: GDIIPTLQMRLGVVE*PAQGYADQQNVCFP
Trigger: TGGGAAGCACACGTTTTGCTGATCAGCGTAACCTTGGGCAGGTCACTCCACCACTCCGAGCCTCATCTGTAAAGTGGGAATGATATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 90 bp ACTAGGCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTaGTCTACCAGCCAGAATTCTACCCTTTCTCAAAGGCCTGGTGGA +
Preference number: 1 (lower is better)
Translates to: TRPWLRLFFGMSHLT*STSQNSTLSQRPGG
Trigger: TCCACCAGGCCTTTGAGAAAGGGTAGAATTCTGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGCCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 90 bp ATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCAACGCTaGAGGGAGGAGGTGGAGGAACACAGTGGGAATGACCACAATGCC +
Preference number: 1 (lower is better)
Translates to: ILISTFLPRQRSEQR*REEVEEHSGNDHNA
Trigger: GGCATTGTGGTCATTCCCACTGTGTTCCTCCACCTCCTCCCTCCAGCGTTGCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 90 bp TTCCATTGCTGGCAGATTGAGGTGACCCAGCAAAAGGTTCTGTCTTaGACCTTGGTGGAGGATGACAGACCCTTGGACCCTCTTGCCATT +
Preference number: 1 (lower is better)
Translates to: FHCWQIEVTQQKVLS*TLVEDDRPLDPLAI
Trigger: AATGGCAAGAGGGTCCAAGGGTCTGTCATCCTCCACCAAGGTTCAAGACAGAACCTTTTGCTGGGTCACCTCAATCTGCCAGCAATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CCA 90 bp CACCTGCTCTACCAGCCAGAATTCTACCCTTTCTCAAAGGCCTGGTaGATGGTCTGCCTCTTTCTGATGCTTTTCCTCTCCACTCCAAGT +
Preference number: 1 (lower is better)
Translates to: HLLYQPEFYPFSKAW*MVCLFLMLFLSTPS
Trigger: ACTTGGAGTGGAGAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTAGAATTCTGGCTGGTAGAGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 90 bp TCTCACCTGCTCTACCAGCCAGAATTCTACCCTTTCTCAAAGGCCTaGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCTCCACTCCA +
Preference number: 1 (lower is better)
Translates to: SHLLYQPEFYPFSKA*WMVCLFLMLFLSTP
Trigger: TGGAGTGGAGAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTAGAATTCTGGCTGGTAGAGCAGGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 90 bp CCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTaGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGAT +
Preference number: 1 (lower is better)
Translates to: PEAPQLDHGENTGSL*RSYSATVVKSSCSD
Trigger: ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 90 bp AGCAAAAGGTTCTGTCTTGAACCTTGGTGGAGGATGACAGACCCTTaGACCCTCTTGCCATTCTTCCAGATCTTGCCATTGCACTCTCCC +
Preference number: 1 (lower is better)
Translates to: SKRFCLEPWWRMTDP*TLLPFFQILPLHSP
Trigger: GGGAGAGTGCAATGGCAAGATCTGGAAGAATGGCAAGAGGGTCCAAGGGTCTGTCATCCTCCACCAAGGTTCAAGACAGAACCTTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR TCA 90 bp AATTCTACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTaGTGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAAC +
Preference number: 1 (lower is better)
Translates to: NSTLSQRPGGWSASF*CFSSPLQVPVAVAN
Trigger: GTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR TCA 90 bp GGCATTTTCCAGAATGTCCTCAAAGCCACCAAGATTCCACATGGATaGCATGCTGGTCGCTCCATCCTGGGGTCTAATGCTTCCAGAATG +
Preference number: 1 (lower is better)
Translates to: GIFQNVLKATKIPHG*HAGRSILGSNASRM
Trigger: CATTCTGGAAGCATTAGACCCCAGGATGGAGCGACCAGCATGTCATCCATGTGGAATCTTGGTGGCTTTGAGGACATTCTGGAAAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR GCA 90 bp TACCAGCCAGAATTCTACCCTTTCTCAAAGGCCTGGTGGATGGTCTaGCTCTTTCTGATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGC +
Preference number: 1 (lower is better)
Translates to: YQPEFYPFSKAWWMV*LFLMLFLSTPSSCC
Trigger: GCAACAGGAACTTGGAGTGGAGAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTAGAATTCTGGCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR TCA 90 bp GGTTGGACATGGATGAAGGTGAAGGTGAAGGCAGTGGCTTCAACATaGGAAAAGTTGTCCAAGGCAGTAGAGGTCTCCCCAAGTCAAAGT +
Preference number: 1 (lower is better)
Translates to: GWTWMKVKVKAVAST*EKLSKAVEVSPSQS
Trigger: ACTTTGACTTGGGGAGACCTCTACTGCCTTGGACAACTTTTCTCATGTTGAAGCCACTGCCTTCACCTTCACCTTCATCCATGTCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR TCA 90 bp AAATGTCCCCACAGCTACTCATCTTCCATTGCTGGCAGATTGAGGTaGCCCAGCAAAAGGTTCTGTCTTGAACCTTGGTGGAGGATGACA +
Preference number: 1 (lower is better)
Translates to: KCPHSYSSSIAGRLR*PSKRFCLEPWWRMT
Trigger: TGTCATCCTCCACCAAGGTTCAAGACAGAACCTTTTGCTGGGTCACCTCAATCTGCCAGCAATGGAAGATGAGTAGCTGTGGGGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 90 bp AGCTCTCACAGTTACTGTGATCTCATTCCATTGAATCCTGACATCTaGCCTGGAGGGAGATATCATTCCCACTTTACAGATGAGGCTCGG +
Preference number: 1 (lower is better)
Translates to: SSHSYCDLIPLNPDI*PGGRYHSHFTDEAR
Trigger: CCGAGCCTCATCTGTAAAGTGGGAATGATATCTCCCTCCAGGGCAGATGTCAGGATTCAATGGAATGAGATCACAGTAACTGTGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR TCA 90 bp CCTCATGTAACGGGAGCTCTCACAGTTACTGTGATCTCATTCCATTaGATCCTGACATCTGCCCTGGAGGGAGATATCATTCCCACTTTA +
Preference number: 1 (lower is better)
Translates to: PHVTGALTVTVISFH*ILTSALEGDIIPTL
Trigger: TAAAGTGGGAATGATATCTCCCTCCAGGGCAGATGTCAGGATTCAATGGAATGAGATCACAGTAACTGTGAGAGCTCCCGTTACATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR TCA 90 bp AGCCTGGAGAGTTTAATGGTTAACTTCTCGCTAAAAAGGGGCGCATaGAGAGTTCACTTGTACTCCTCATGTAACGGGAGCTCTCACAGT +
Preference number: 1 (lower is better)
Translates to: SLESLMVNFSLKRGA*RVHLYSSCNGSSHS
Trigger: ACTGTGAGAGCTCCCGTTACATGAGGAGTACAAGTGAACTCTTCATGCGCCCCTTTTTAGCGAGAAGTTAACCATTAAACTCTCCAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 90 bp TTAATAGGGAGGAAGGGAGGATTAAATGAGATGATGCATGTCAGATaGCTTAAGACAGTGCCTGGGAGTAAGGAAGAGCTTGAGACAGGC +
Preference number: 1 (lower is better)
Translates to: LIGRKGGLNEMMHVR*LKTVPGSKEELETG
Trigger: GCCTGTCTCAAGCTCTTCCTTACTCCCAGGCACTGTCTTAAGGCATCTGACATGCATCATCTCATTTAATCCTCCCTTCCTCCCTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 90 bp ATAACCAATTTCAAGCTATCAGTGTGGCACTGGCAAACATGGAGTTaGGAAGAGAAGCTAACAGTCAGTTCTCACAAGCCAGCTCCAGCA +
Preference number: 1 (lower is better)
Translates to: ITNFKLSVWHWQTWS*EEKLTVSSHKPAPA
Trigger: TGCTGGAGCTGGCTTGTGAGAACTGACTGTTAGCTTCTCTTCCCAACTCCATGTTTGCCAGTGCCACACTGATAGCTTGAAATTGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR TCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCCTGCAGGAGCGCATTaGTGGAGGGCAGGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHPAGAH*WRAGCC
Trigger: ACAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGG...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp TGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCTGGCGCATCCTTCCCATTCCTaGTCTGGGACTGGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: WRRLPAGAYRAQTLSHLAHPSHS*SGTGPG
Trigger: GCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG...CGCCAGGTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp TGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCTGGCGGTGTTCCAGACCCTATaGTCTCCAGCAGGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: WRRLPAGAYRAQTLSHLAVFQTL*SPAGPL
Trigger: GAGAGGGCCTGCTGGAGAGCATAGGGTCTGGAACAC...CGCCAGGTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACTCCTCCAAGCTCACCTaGACCTGGGAACGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHSSKLT*TWERSR
Trigger: GCGGCTGCGTTCCCAGGTGCAGGTGAGCTTGGAGGA...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGGCTCTCTTAGGGGGCTaGGGGGAGCCAGTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: SKASLASGEVVLEKTGWLALLGG*GEPVEP
Trigger: GGGCTCCACTGGCTCCCCCCAGCCCCCTAAGAGAGC...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGGTGGGCATGGGGTaGATCGCTGGGGGACCCTCC +
Preference number: 2 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAVVGMG*IAGGPS
Trigger: GGAGGGTCCCCCAGCGATGCACCCCATGCCCACCAC...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGCTCTCTTAGGGGGCTaGGGGGAGCCAGTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGALLGG*GEPVEP
Trigger: GGGCTCCACTGGCTCCCCCCAGCCCCCTAAGAGAGC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp GACCACAATGCCCAGAAATGGTTCCAGCCTCCCTGCCTTACCGCAGACCAGGCTGGGCACAGTCTCCGCTaGGATTGGGGGCTTGGCTGG +
Preference number: 2 (lower is better)
Translates to: DHNAQKWFQPPCLTADQAGHSLR*DWGLGW
Trigger: CCAGCCAAGCCCCCAATCCCAGCGGAGACTGTGCCC...AGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCATTTCTGGGCATTGTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CAA 90 bp GGGGGAATCGTTTCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTaGGAGAAGACGGGATGGCTGAGCAAGGTGACAGCAGAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: GGIVSKASLASGEVV*EKTGWLSKVTAEGG
Trigger: GCCTCCCTCTGCTGTCACCTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAACGATTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR TCA 90 bp TGCAAGGTGGGCAGCAGCAGCAGCAGCTCTCCAAAGCGGCCACGCGAGTCATACGGCTGTCCTTTGGGATaGAGTCGGGGGTTGGACATG +
Preference number: 2 (lower is better)
Translates to: CKVGSSSSSSPKRPRESYGCPLG*SRGLDM
Trigger: CATGTCCAACCCCCGACTTCATCCCAAAGGACAGCC...GTATGACTCGCGTGGCCGCTTTGGAGAGCTGCTGCTGCTGCTGCCCACCTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR TCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGCGCCAGCATGGGCTCTaGGCAGGGCCACCTGGTCGT +
Preference number: 2 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKRQHGL*AGPPGR
Trigger: ACGACCAGGTGGCCCTGCTCAGAGCCCATGCTGGCG...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCACGTGATCACCAGGTaGTCTCTTAGGGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAEHVITR*SLRGLG
Trigger: CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTG...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGCACGTGATCACCAGGTaGTCTCTTAGGGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRHVITR*SLRGLG
Trigger: CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTG...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACGTGATCACCAGGTaGTCTCTTAGGGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGHVITR*SLRGLG
Trigger: CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTG...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGCACGTGATCACCAGGTaGTCTCTTAGGGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SKASLASGEVVLEKTGWLHVITR*SLRGLG
Trigger: CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTG...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp TGCAAGGTGGGCAGCAGCAGCAGCAGCTCTCCAAAGCGGCCACGCGAGTCATACGCAAGGTGCCCCAAGTaGCACAATTGGACCCAGCCT +
Preference number: 2 (lower is better)
Translates to: CKVGSSSSSSPKRPRESYARCPK*HNWTQP
Trigger: AGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC...GTATGACTCGCGTGGCCGCTTTGGAGAGCTGCTGCTGCTGCTGCCCACCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTGCTCTCTTAGGGGGCTaGGGGGAGCCAGTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLALLGG*GEPVEP
Trigger: GGGCTCCACTGGCTCCCCCCAGCCCCCTAAGAGAGC...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCTCTGGGACTGGTCCTaGCATCACGTCTTCCTTTGC +
Preference number: 2 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHLWDWS*HHVFLC
Trigger: GCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR TCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCGTCTTCCTTTGCCGTaGCCACGTGATCACCAGGTG +
Preference number: 2 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAERLPLP*PRDHQV
Trigger: CACCTGGTGATCACGTGGTCACGGCAAAGGAAGACG...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR TCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGGGCTGTCCTTTGGGATaGAGTCGGGGGTTGGACATG +
Preference number: 2 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAEGCPLG*SRGLDM
Trigger: CATGTCCAACCCCCGACTTCATCCCAAAGGACAGCC...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR TCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCTGTTCCTGCATCAGGTaGGGGTGCAGGGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPCSCIR*GCRGWW
Trigger: CCACCACCCCCTGCACCCTCACCTGATGCAGGAACA...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTGCTCTCTTAGGGGGCTaGGGGGAGCCAGTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPALLGG*GEPVEP
Trigger: GGGCTCCACTGGCTCCCCCCAGCCCCCTAAGAGAGC...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCGATTGGGGGCTTGGCTaGGACTGCCGTAGGGATGTG +
Preference number: 2 (lower is better)
Translates to: VEGSRKPLNLITVRTQGADWGLG*DCRRDV
Trigger: CACATCCCTACGGCAGTCCCAGCCAAGCCCCCAATC...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCAGCCCCTTGGCATCTaGGTCAAAGAAGATGATGGC +
Preference number: 2 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHQPLGI*VKEDDG
Trigger: GCCATCATCTTCTTTGACCCAGATGCCAAGGGGCTG...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp GTGCATCGCTGGGGGACCCTCCCAGCAGCATCTCCTGCAACAGGTTGTCAATCTCCGCTTGATCTTCCCTaGATCGCTCAGCCCCTTGGC +
Preference number: 2 (lower is better)
Translates to: VHRWGTLPAASPATGCQSPLDLP*IAQPLG
Trigger: GCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCGG...AGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGGTCCCCCAGCGATGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR TCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTTGGCAGAGAGGGGCTTaGCGATTGTGGCGACGGCTC +
Preference number: 2 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLWQRGA*RLWRRL
Trigger: GAGCCGTCGCCACAATCGTCAAGCCCCTCTCTGCCA...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACCTCAAACCCAGGCCTaGTTAGCCCTCCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPPQTQA*LALPCP
Trigger: GGGGCAGGGGAGGGCTAAGCAGGCCTGGGTTTGAGG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGTTCCCATTCCTGCTCTaGGACTGGTCCTGGCATCAC +
Preference number: 2 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKFPFLL*DWSWHH
Trigger: GTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAA...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp GTGCATCGCTGGGGGACCCTCCCAGCAGCATCTCCTGCAACAGGTTGTCAATCTGGTGGCAGTGGGATGTaGCCCTTAGGCCATGTTCTC +
Preference number: 2 (lower is better)
Translates to: VHRWGTLPAASPATGCQSGGSGM*PLGHVL
Trigger: GAGAACATGGCCTAAGGGCCACATCCCACTGCCACC...AGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGGTCCCCCAGCGATGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACACGTCAAGGGTGGCAGTaGGATGTGGCCCTTAGGCCA +
Preference number: 2 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTRQGWQ*DVALRP
Trigger: TGGCCTAAGGGCCACATCCCACTGCCACCCTTGACG...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGCGTCAAGGGTGGCAGTaGGATGTGGCCCTTAGGCCA +
Preference number: 2 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRRQGWQ*DVALRP
Trigger: TGGCCTAAGGGCCACATCCCACTGCCACCCTTGACG...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACGATGAAGTCGGGGGTTaGACATGGATGAAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHDEVGG*TWMKVK
Trigger: CTTCACCTTCATCCATGTCCAACCCCCGACTTCATC...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCCTTCCAGAATGCACCTaGAGTGACGGTCTCCGGAGC +
Preference number: 2 (lower is better)
Translates to: VEGSRKPLNLITVRTQGALPECT*SDGLRS
Trigger: GCTCCGGAGACCGTCACTCCAGGTGCATTCTGGAAG...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp TATCATTCCCACTTTACAGATGAGGCTCGGAGTGGTGGAGTGACCTGCCCAAGGGGGCACAGTCTCCGCTaGGATTGGGGGCTTGGCTGG +
Preference number: 2 (lower is better)
Translates to: YHSHFTDEARSGGVTCPRGHSLR*DWGLGW
Trigger: CCAGCCAAGCCCCCAATCCCAGCGGAGACTGTGCCC...CCTTGGGCAGGTCACTCCACCACTCCGAGCCTCATCTGTAAAGTGGGAATGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGCTGCAGGAGTACATGTaGTTCTTCCGCACGCTCCTC +
Preference number: 2 (lower is better)
Translates to: SKASLASGEVVLEKTGWLLQEYM*FFRTLL
Trigger: GAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAG...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CAA 90 bp GGTGCATCGCTGGGGGACCCTCCCAGCAGCATCTCCTGCAACAGGTaGTCAATCTTGGCCATGCCGAAGAGCTTGATGAACTGGATCTGC +
Preference number: 2 (lower is better)
Translates to: GASLGDPPSSISCNR*SILAMPKSLMNWIC
Trigger: GCAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGGTCCCCCAGCGATGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR TCA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGATTTGCCGTGACCACGTaGTCACCAGGTGCTCTCTTA +
Preference number: 2 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGFAVTT*SPGALL
Trigger: TAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAA...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR TCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCACCCACCCAAGTCCCTaGAGAAGGAGGATGAGGTTG +
Preference number: 2 (lower is better)
Translates to: VEGSRKPLNLITVRTQGATHPSP*RRRMRL
Trigger: CAACCTCATCCTCCTTCTTCAGGGACTTGGGTGGGT...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCATCCTTCCCATTCCTaGTCTGGGACTGGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGHPSHS*SGTGPG
Trigger: GCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTCTAGACCCTGCCTGGTaGCTGGTCCCAGTCAGTGCT +
Preference number: 2 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLLDPAW*LVPVSA
Trigger: AGCACTGACTGGGACCAGGCACCAGGCAGGGTCTAG...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCCAGCCTTCTAGACCCTaGCTGGTGCCTGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSQPSRP*LVPGPS
Trigger: ACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTG...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTCCTGCCCCCACACTGTaGACACTGTCCCACCCCCAT +
Preference number: 2 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPPAPTL*TLSHPH
Trigger: ATGGGGGTGGGACAGTGTGCACAGTGTGGGGGCAGG...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR GCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCATGCTTAGCCCTCCCCTaGCCCCACACTGTGCACACT +
Preference number: 2 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPCLALP*PHTVHT
Trigger: AGTGTGCACAGTGTGGGGGCAGGGGAGGGCTAAGCA...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR GCA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCTCCACATGGATGACATaGTGGTCGCTCCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSSTWMT*WSLHPG
Trigger: CCCAGGATGGAGCGACCAGCATGTCATCCATGTGGA...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR GCA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGAACGAGAACCAGCAGCTaGTCCTTCATGGACTCACAC +
Preference number: 2 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGTRTSS*SFMDSH
Trigger: GTGTGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGT...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGTGGCAGTGGGATGTaGCCCTTAGGCCATGTTCTC +
Preference number: 2 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTGGSGM*PLGHVL
Trigger: GAGAACATGGCCTAAGGGCCACATCCCACTGCCACC...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCGGCCTCCTTGGCCTCTaGAGAGGTGGTGTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPGLLGL*RGGVGE
Trigger: TTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCC...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCATGGCTGCCTGTCCCCTaGGTCGGGGCCACTCACACA +
Preference number: 2 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASWLPVP*VGATHT
Trigger: TGTGTGAGTGGCCCCGACCCAGGGGACAGGCAGCCA...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CAA 90 bp CAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCTCCTaGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: QHVPRMTGGIVSKAS*ASGEVVLEKTGWLS
Trigger: GCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR TCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGGCTGTCCTTTGGGATaGAGTCGGGGGTTGGACATG +
Preference number: 2 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKGCPLG*SRGLDM
Trigger: CATGTCCAACCCCCGACTTCATCCCAAAGGACAGCC...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR TCA 90 bp AGTGTTGAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACTCTGTCTGGACACCATaGCAGGGGCTAGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SVEQGAGVGPTVSLLPNHSVWTP*QGLGEE
Trigger: CTCCTCTCCTAGCCCCTGTCATGGTGTCCAGACAGA...GTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTCAACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR TCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCCCCGGAAGCATTTCTTaGGCCTGCAGTAGCGGCACT +
Preference number: 2 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPPGSIS*ACSSGT
Trigger: AGTGCCGCTACTGCAGGCTCAAGAAATGCTTCCGGG...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR TCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCTTGACCTTCGAGTGCTaGTCCGGTCCCGCTCATTCT +
Preference number: 2 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPLTFEC*SGPAHS
Trigger: AGAATGAGCGGGACCGGATCAGCACTCGAAGGTCAA...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGAAGGAGGAGCAAGGTaGCCCAAGTGCCACAATTGG +
Preference number: 2 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGEGGAR*PKCHNW
Trigger: CCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCTAGACCCTGCCTGGTaGCTGGTCCCAGTCAGTGCT +
Preference number: 2 (lower is better)
Translates to: RATVAHGTPWDILISTFLLDPAW*LVPVSA
Trigger: AGCACTGACTGGGACCAGGCACCAGGCAGGGTCTAG...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR GCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTGTGTTCCAGACCCTATaGTCTCCAGCAGGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLVFQTL*SPAGPL
Trigger: GAGAGGGCCTGCTGGAGAGCATAGGGTCTGGAACAC...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCGGAAGCCCAGCTCCCTaGATACTCCTTGAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSGSPAP*ILLEAD
Trigger: ATCAGCTTCAAGGAGTATGCAGGGAGCTGGGCTTCC...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGATTCCCATTCCTGCTCTaGGACTGGTCCTGGCATCAC +
Preference number: 2 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGFPFLL*DWSWHH
Trigger: GTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAA...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGTTCCCATTCCTGCTCTaGGACTGGTCCTGGCATCAC +
Preference number: 2 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRFPFLL*DWSWHH
Trigger: GTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAA...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTGGTGGCAGTGGGATGTaGCCCTTAGGCCATGTTCTC +
Preference number: 2 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLGGSGM*PLGHVL
Trigger: GAGAACATGGCCTAAGGGCCACATCCCACTGCCACC...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCACGTCAAGGGTGGCAGTaGGATGTGGCCCTTAGGCCA +
Preference number: 2 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPRQGWQ*DVALRP
Trigger: TGGCCTAAGGGCCACATCCCACTGCCACCCTTGACG...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACAGGCGGCTGTCCTTTaGGATGAAGTCGGGGGTTGG +
Preference number: 2 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPQAAVL*DEVGGW
Trigger: CCAACCCCCGACTTCATCCCAAAGGACAGCCGCCTG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCGGCCAATCTTGGTCCTaGGAGTGGGCAGGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: RATVAHGTPWDILISTFLGQSWS*EWAGFP
Trigger: TGGGAACCCTGCCCACTCCCAGGACCAAGATTGGCC...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp TATCATTCCCACTTTACAGATGAGGCTCGGAGTGGTGGAGTGACCTGCCCAAGGGATTGGGGGCTTGGCTaGGACTGCCGTAGGGATGTG +
Preference number: 2 (lower is better)
Translates to: YHSHFTDEARSGGVTCPRDWGLG*DCRRDV
Trigger: CACATCCCTACGGCAGTCCCAGCCAAGCCCCCAATC...CCTTGGGCAGGTCACTCCACCACTCCGAGCCTCATCTGTAAAGTGGGAATGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CAA 90 bp TCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTaGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCC +
Preference number: 2 (lower is better)
Translates to: SKFLLQSPTWVCFLG*KAFRDPHPSTHPSP
Trigger: GGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CAA 90 bp CTGGGGGACCCTCCCAGCAGCATCTCCTGCAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTGATGAACTGGATCTGCTCGATCATC +
Preference number: 2 (lower is better)
Translates to: LGDPPSSISCNRLSI*AMPKSLMNWICSII
Trigger: GATGATCGAGCAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGGTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR TCA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCGTCTTCCTTTGCCGTaGCCACGTGATCACCAGGTG +
Preference number: 2 (lower is better)
Translates to: RATVAHGTPWDILISTFLRLPLP*PRDHQV
Trigger: CACCTGGTGATCACGTGGTCACGGCAAAGGAAGACG...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR TCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGGCTGTCCTTTGGGATaGAGTCGGGGGTTGGACATG +
Preference number: 2 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRGCPLG*SRGLDM
Trigger: CATGTCCAACCCCCGACTTCATCCCAAAGGACAGCC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR TCA 90 bp GCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCAAGGCTTGGGAGCTCTaGGCAGGGCACAGTCTCCGC +
Preference number: 2 (lower is better)
Translates to: ALHGTFLSQPFSQDRGLSKAWEL*AGHSLR
Trigger: GCGGAGACTGTGCCCTGCTCAGAGCTCCCAAGCCTT...GCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR TCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTGCTGTCCTCATAGCTTaGCCTTCGAGTGCTGATCCG +
Preference number: 2 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLAVLIA*PSSADP
Trigger: CGGATCAGCACTCGAAGGTCAAGCTATGAGGACAGC...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAAGGAGGAGCAAGGTaGCCCAAGTGCCACAATTGG +
Preference number: 2 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKEGGAR*PKCHNW
Trigger: CCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTC...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCACAGCCTTCTAGACCCTaGCTGGTGCCTGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASQPSRP*LVPGPS
Trigger: ACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTG...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGACGGCTTCCTTCTTCATaGCAGCCCGGAAGCATTTCT +
Preference number: 2 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGRLPSS*QPGSIS
Trigger: AGAAATGCTTCCGGGCTGGCATGAAGAAGGAAGCCG...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCATTCCTGCTCTGGGACTaGTCCTGGCATCACGTCTTC +
Preference number: 2 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPFLLWD*SWHHVF
Trigger: GAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCATGGCCTCTGGAGAGGTaGTGTTGGAGAAGACGGGAT +
Preference number: 2 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPWPLER*CWRRRD
Trigger: ATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCA...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp GTGCATCGCTGGGGGACCCTCCCAGCAGCATCTCCTGCAACAGGTTGTCAATCTCCTTTCTCAAAGGCCTaGTGGATGGTCTGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: VHRWGTLPAASPATGCQSPFSKA*WMVCLF
Trigger: AAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGG...AGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGGTCCCCCAGCGATGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCACTACCACTAGGCCTTaGCTCAGGCTGTTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSTTTRP*LRLFFG
Trigger: TCCAAAGAACAGCCTGAGCCAAGGCCTAGTGGTAGT...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR TCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCTCCTGGATGTCACTCTaGTGTGAGGGTTTACCCATC +
Preference number: 2 (lower is better)
Translates to: HPSHSCSGTGPGITSSFASWMSL*CEGLPI
Trigger: GATGGGTAAACCCTCACATCAGAGTGACATCCAGGA...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR TCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCATGTCCGTTGCTGAGGTaGGTGGGCATTGTGTTGGCA +
Preference number: 2 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPCPLLR*VGIVLA
Trigger: TGCCAACACAATGCCCACTCACCTCAGCAACGGACA...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCATCCTTCCCATTCCTaGTCTGGGACTGGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYHPSHS*SGTGPG
Trigger: GCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCACATCCTTCCCATTCCTaGTCTGGGACTGGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASHPSHS*SGTGPG
Trigger: GCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACGCAAGGTGCCCCAAGTaGCACAATTGGACCCAGCCT +
Preference number: 2 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYARCPK*HNWTQP
Trigger: AGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCCAGCCTTCTAGACCCTaGCTGGTGCCTGGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLQPSRP*LVPGPS
Trigger: ACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTG...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCTCCACATGGATGACATaGTGGTCGCTCCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: RATVAHGTPWDILISTFLSTWMT*WSLHPG
Trigger: CCCAGGATGGAGCGACCAGCATGTCATCCATGTGGA...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR GCA 90 bp CACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGGGGCTTGGCTGGGACTaGCGTAGGGATGTGGTGATT +
Preference number: 2 (lower is better)
Translates to: HCCPRHSMGHSYLNLSPKGLGWD*RRDVVI
Trigger: AATCACCACATCCCTACGGCAGTCCCAGCCAAGCCC...CTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR GCA 90 bp TATCATTCCCACTTTACAGATGAGGCTCGGAGTGGTGGAGTGACCTGCCCAAGGGTGAAAGGATCGCCCTaGTCTACCCTCATCCCCAAG +
Preference number: 2 (lower is better)
Translates to: YHSHFTDEARSGGVTCPRVKGSP*STLIPK
Trigger: CTTGGGGATGAGGGTAGAGCAGGGCGATCCTTTCAC...CCTTGGGCAGGTCACTCCACCACTCCGAGCCTCATCTGTAAAGTGGGAATGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR GCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCAGCTCGTCAAGGATaGGTATGGACACCCGGCTCA +
Preference number: 2 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYPARQG*VWTPGS
Trigger: TGAGCCGGGTGTCCATACGCATCCTTGACGAGCTGG...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGTTCCTGCTCTGGGACTaGTCCTGGCATCACGTCTTC +
Preference number: 2 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRFLLWD*SWHHVF
Trigger: GAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp AGTCAGTGCTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCCAGGCGGCTGTCCTTTaGGATGAAGTCGGGGGTTGG +
Preference number: 2 (lower is better)
Translates to: SQCLQHVPRMTGGIVSKAQAAVL*DEVGGW
Trigger: CCAACCCCCGACTTCATCCCAAAGGACAGCCGCCTG...GGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACGGCCTCCTTGGCCTCTaGAGAGGTGGTGTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYGLLGL*RGGVGE
Trigger: TTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCC...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCATTTCCAAGGCCTCCTTaGCCTCTGGAGAGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPFPRPP*PLERWC
Trigger: ACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAA...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAGGATGAGGTTGGGTTaGAGGAGAAAGGCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPRMRLG*RRKASS
Trigger: GGAAGACGCCTTTCTCCTCCAACCCAACCTCATCCT...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGAGGATGAGGTTGGGTTaGAGGAGAAAGGCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKRMRLG*RRKASS
Trigger: GGAAGACGCCTTTCTCCTCCAACCCAACCTCATCCT...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTATCAGGACCTCAGCCTaGTGTTCCAGACCCTATGCT +
Preference number: 2 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLIRTSA*CSRPYA
Trigger: AGCATAGGGTCTGGAACACCAGGCTGAGGTCCTGAT...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACGGTCCCGCTCATTCTaGACGGCTTCCTTCTTCATG +
Preference number: 2 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPRSRSF*TASFFM
Trigger: CATGAAGAAGGAAGCCGTCCAGAATGAGCGGGACCG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAGAGCTCGCAGAAAGCTaGGATGTACTTGGCCCACTC +
Preference number: 2 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPELAES*DVLGPL
Trigger: GAGTGGGCCAAGTACATCCCAGCTTTCTGCGAGCTC...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR TCA 90 bp AGTCAGTGCTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCTCTGTCTGGACACCATaGCAGGGGCTAGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SQCLQHVPRMTGGIVSKASVWTP*QGLGEE
Trigger: CTCCTCTCCTAGCCCCTGTCATGGTGTCCAGACAGA...GGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR TCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACCTGGGTTCAAGTCCTaGCTCAGCCACTTCCTAGTT +
Preference number: 2 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPPGFKS*LSHFLV
Trigger: AACTAGGAAGTGGCTGAGTCAGGACTTGAACCCAGG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGCATCACGTCTTCCTTTaGCGTGACCACGTGATCACC +
Preference number: 2 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRHHVFL*RDHVIT
Trigger: GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATG...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp GTTGCTGAGGTGAGTGGGCATTGTGTTGGCAACGATGACGTTGGTTCCCATATGGAAGGAGGAGCAAGGTaGCCCAAGTGCCACAATTGG +
Preference number: 2 (lower is better)
Translates to: VAEVSGHCVGNDDVGSHMEGGAR*PKCHNW
Trigger: CCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTC...CATATGGGAACCAACGTCATCGTTGCCAACACAATGCCCACTCACCTCAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp AGTGTTGAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACTCCAAGTTCCTGTTaGAGTCGCCAACCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: SVEQGAGVGPTVSLLPNHTPSSC*SRQPGF
Trigger: AAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGT...GTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTCAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR GCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCAGCCTGGTGGATGGTCTaGCTCTTTCTGATGCTTTTC +
Preference number: 2 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPAWWMV*LFLMLF
Trigger: GAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGC...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTGGAAGCCCAGCTCCCTaGATACTCCTTGAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPGSPAP*ILLEAD
Trigger: ATCAGCTTCAAGGAGTATGCAGGGAGCTGGGCTTCC...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGACGTCAAGGGTGGCAGTaGGATGTGGCCCTTAGGCCA +
Preference number: 2 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGRQGWQ*DVALRP
Trigger: TGGCCTAAGGGCCACATCCCACTGCCACCCTTGACG...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTGGCCTCCTTGGCCTCTaGAGAGGTGGTGTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVGLLGL*RGGVGE
Trigger: TTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCC...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp GCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCCTTCTAGACCCTGCCTaGTGCCTGGTCCCAGTCAGT +
Preference number: 2 (lower is better)
Translates to: ALHGTFLSQPFSQDRGLSLLDPA*CLVPVS
Trigger: ACTGACTGGGACCAGGCACCAGGCAGGGTCTAGAAG...GCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTATCAGGACCTCAGCCTaGTGTTCCAGACCCTATGCT +
Preference number: 2 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPIRTSA*CSRPYA
Trigger: AGCATAGGGTCTGGAACACCAGGCTGAGGTCCTGAT...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CAA 90 bp GGTCTGCCTCTTTCTGATGCTTTTCCTCTCCACTCCAAGTTCCTGTaGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: GLPLSDAFPLHSKFL*QSPTWVCFLGLKAF
Trigger: GAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCATCAGAAAGAGGCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CAA 90 bp TGTGGTGACCGAGACACAAGGCCACCCTCCTGTAATAGTTTAGCCTaGGAGAGAAGCCCAGTGGCTACAGATCTGGCTGGAGATTCTCAA +
Preference number: 2 (lower is better)
Translates to: CGDRDTRPPSCNSLA*ERSPVATDLAGDSQ
Trigger: TTGAGAATCTCCAGCCAGATCTGTAGCCACTGGGCTTCTCTCCAAGGCTAAACTATTACAGGAGGGTGGCCTTGTGTCTCGGTCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR TCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATTTTGCCGTGACCACGTaGTCACCAGGTGCTCTCTTA +
Preference number: 2 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYFAVTT*SPGALL
Trigger: TAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAA...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR TCA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCACCCACCCAAGTCCCTaGAGAAGGAGGATGAGGTTG +
Preference number: 2 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLTHPSP*RRRMRL
Trigger: CAACCTCATCCTCCTTCTTCAGGGACTTGGGTGGGT...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR TCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCTGGGTTCAAGTCCTaGCTCAGCCACTTCCTAGTT +
Preference number: 2 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYPGFKS*LSHFLV
Trigger: AACTAGGAAGTGGCTGAGTCAGGACTTGAACCCAGG...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACCTGGTCCCAGTCAGTaGTTACAACATGTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPPGPSQ*LQHVPR
Trigger: TCTGGGAACATGTTGTAAGCACTGACTGGGACCAGG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCACCTGGTCCCAGTCAGTaGTTACAACATGTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPPGPSQ*LQHVPR
Trigger: TCTGGGAACATGTTGTAAGCACTGACTGGGACCAGG...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR GCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTATGTCCCATCTCACCTaGTCTACCAGCCAGAATTCT +
Preference number: 2 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLMSHLT*STSQNS
Trigger: AGAATTCTGGCTGGTAGAGCAGGTGAGATGGGACAT...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp AGTCAGTGCTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCTTGTCCACCACGCACTaGCGGCTAAATCTGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SQCLQHVPRMTGGIVSKALSTTH*RLNLQE
Trigger: CTCCTGCAGATTTAGCCGGCAGTGCGTGGTGGACAA...GGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATCACACACATCTGCGATaGTGGCAATCTTCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYHTHLR*WQSSSP
Trigger: GGGCGAAGAAGATTGCCAGCATCGCAGATGTGTGTG...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp AGTCAGTGCTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCTTCCCATTCCTGCTCTaGGACTGGTCCTGGCATCAC +
Preference number: 2 (lower is better)
Translates to: SQCLQHVPRMTGGIVSKAFPFLL*DWSWHH
Trigger: GTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAA...GGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGTGTTCCCAGAATGACTaGGGGAATCGTTTCCAAGGC +
Preference number: 2 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRCSQND*GNRFQG
Trigger: GCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACA...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCAGCTGTGTTCATTTTCTaGAAGCCCAGCTCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPAVFIF*KPSSLH
Trigger: ATGCAGGGAGCTGGGCTTCCAGAAAATGAACACAGC...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp GAAAGCTGGGATGTACTTGGCCCACTCAACGAGAACCAGCAGCTGCTCCTTCATACACATCTGCGATGCTaGCAATCTTCTTCGCCCGAA +
Preference number: 2 (lower is better)
Translates to: ESWDVLGPLNENQQLLLHTHLRC*QSSSPE
Trigger: TTCGGGCGAAGAAGATTGCCAGCATCGCAGATGTGT...ATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CAA 90 bp TTCTGTCTTGAACCTTGGTGGAGGATGACAGACCCTTGGACCCTCTaGCCATTCTTCCAGATCTTGCCATTGCACTCTCCCCTCATCACT +
Preference number: 2 (lower is better)
Translates to: FCLEPWWRMTDPWTL*PFFQILPLHSPLIT
Trigger: AGTGATGAGGGGAGAGTGCAATGGCAAGATCTGGAAGAATGGCAAGAGGGTCCAAGGGTCTGTCATCCTCCACCAAGGTTCAAGACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR GCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATACTCCAAGTTCCTGTTaGAGTCGCCAACCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYTPSSC*SRQPGF
Trigger: AAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGT...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp GCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCCAGCCTCCCGTCCTCTaGAGAACTGCTGTGTTCATT +
Preference number: 2 (lower is better)
Translates to: ALHGTFLSQPFSQDRGLSQPPVL*RTAVFI
Trigger: AATGAACACAGCAGTTCTGCAGAGGACGGGAGGCTG...GCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR GCA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCCAGCCTCCCGTCCTCTaGAGAACTGCTGTGTTCATT +
Preference number: 2 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLQPPVL*RTAVFI
Trigger: AATGAACACAGCAGTTCTGCAGAGGACGGGAGGCTG...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR GCA 90 bp TATCATTCCCACTTTACAGATGAGGCTCGGAGTGGTGGAGTGACCTGCCCAAGGATGATGCATGTCAGATaGCTTAAGACAGTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: YHSHFTDEARSGGVTCPRMMHVR*LKTVPG
Trigger: CCCAGGCACTGTCTTAAGGCATCTGACATGCATCAT...CCTTGGGCAGGTCACTCCACCACTCCGAGCCTCATCTGTAAAGTGGGAATGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR GCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCAGGACTCACACACATCTaGGATGCTGGCAATCTTCTT +
Preference number: 2 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPGLTHI*DAGNLL
Trigger: AAGAAGATTGCCAGCATCGCAGATGTGTGTGAGTCC...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CCA 90 bp ACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCAACCCAAGTGCCACAATTaGACCCAGCCTCACAGGGCT +
Preference number: 2 (lower is better)
Translates to: TPWDILISTFLPRQRSEQPKCHN*TQPHRA
Trigger: AGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGG...TTGCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCTTGGAGAAGACGGGATaGCTGAGCAAGGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLLEKTG*LSKVTA
Trigger: TGCTGTCACCTTGCTCAGCCATCCCGTCTTCTCCAA...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTGGAGAAGACGGGATaGCTGAGCAAGGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVLEKTG*LSKVTA
Trigger: TGCTGTCACCTTGCTCAGCCATCCCGTCTTCTCCAA...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CCA 90 bp CACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGCCTTTCTCAAAGGCCTaGTGGATGGTCTGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: HCCPRHSMGHSYLNLSPKPFSKA*WMVCLF
Trigger: AAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGG...CTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAGCTCAGGCTGTTCTTTaGAATGTCCCATCTCACCTG +
Preference number: 2 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASAQAVL*NVPSHL
Trigger: CAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGC...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGAACATGGATGACATGCTaGTCGCTCCATCCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGTWMTC*SLHPGV
Trigger: GACCCCAGGATGGAGCGACCAGCATGTCATCCATGT...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CAA 90 bp TCCATACATACTCACACACACACAGCCTCCCCGAGGGCAAAGATCTaGTTCTTTGCTGAATTGCCAGCACTTAGAACAGTGACTGGCACG +
Preference number: 2 (lower is better)
Translates to: SIHTHTHTASPRAKI*FFAELPALRTVTGT
Trigger: CGTGCCAGTCACTGTTCTAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
3UTR-3UTR TCA 90 bp CACTTGTACTCCTCATGTAACGGGAGCTCTCACAGTTACTGTGATCTCATTCCATTCCCAGCAGAGAACTaGCCCCCTGCTCCAACAGAT +
Preference number: 2 (lower is better)
Translates to: HLYSSCNGSSHSYCDLIPFPAEN*PPAPTD
Trigger: ATCTGTTGGAGCAGGGGGTCAGTTCTCTGCTGGGAA...TGGAATGAGATCACAGTAACTGTGAGAGCTCCCGTTACATGAGGAGTACAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CCA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCGCTCAGGCTGTTCTTTaGAATGTCCCATCTCACCTG +
Preference number: 2 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLAQAVL*NVPSHL
Trigger: CAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGC...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp GCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCCACCAAGATTCCACATaGATGACATGCTGGTCGCTC +
Preference number: 2 (lower is better)
Translates to: ALHGTFLSQPFSQDRGLSHQDST*MTCWSL
Trigger: GAGCGACCAGCATGTCATCCATGTGGAATCTTGGTG...GCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR TCA 90 bp CACTTGTACTCCTCATGTAACGGGAGCTCTCACAGTTACTGTGATCTCATTCCAAACAGATTGTTCCCATaGAGGGCCACTGTTGCCCAC +
Preference number: 2 (lower is better)
Translates to: HLYSSCNGSSHSYCDLIPNRLFP*RATVAH
Trigger: GTGGGCAACAGTGGCCCTTCATGGGAACAATCTGTT...TGGAATGAGATCACAGTAACTGTGAGAGCTCCCGTTACATGAGGAGTACAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATAAGAGCTTGATGAACTaGATCTGCTCGATCATCTGC +
Preference number: 2 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYKSLMN*ICSIIC
Trigger: GCAGATGATCGAGCAGATCCAGTTCATCAAGCTCTT...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR GCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGAATGTCCCATCTCACCTaGTCTACCAGCCAGAATTCT +
Preference number: 2 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGMSHLT*STSQNS
Trigger: AGAATTCTGGCTGGTAGAGCAGGTGAGATGGGACAT...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGAAACACAGGGAGCCTTTaGAGAAGCTATTCAGCCACT +
Preference number: 2 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGNTGSL*RSYSAT
Trigger: AGTGGCTGAATAGCTTCTCCAAAGGCTCCCTGTGTT...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CCA 90 bp GCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCCCCTTTTGTTCACACTaGTCAGTGGCATTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: ALHGTFLSQPFSQDRGLSPFCSH*SVAFSR
Trigger: TCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGG...GCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CAA 90 bp AATAACCAATTTCAAGCTATCAGTGTGGCACTGGCAAACATGGAGTaGGGAAGAGAAGCTAACAGTCAGTTCTCACAAGCCAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: NNQFQAISVALANME*GREANSQFSQASSS
Trigger: GCTGGAGCTGGCTTGTGAGAACTGACTGTTAGCTTCTCTTCCCAACTCCATGTTTGCCAGTGCCACACTGATAGCTTGAAATTGGTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR GCA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATCGTCCTCTGCAGAACTaGTGTGTTCATTTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDRPLQN*CVHFLE
Trigger: TTCCAGAAAATGAACACAGCAGTTCTGCAGAGGACG...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CCA 90 bp TCACATTACAATAAAGTTATTAAGGTGGAATGGGTTTCTCCTCCAGAAAGGGGTCCCAAGTGCCACAATTaGACCCAGCCTCACAGGGCT +
Preference number: 2 (lower is better)
Translates to: SHYNKVIKVEWVSPPERGPKCHN*TQPHRA
Trigger: AGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGG...ACCCCTTTCTGGAGGAGAAACCCATTCCACCTTAATAACTTTATTGTAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR GCA 90 bp CTCACACACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCGAACAAATAGACCATTaGCTTGTTCCCATTTTTCTG +
Preference number: 2 (lower is better)
Translates to: LTHTQPPRGQRSCSLLNCEQIDH*LVPIFL
Trigger: CAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTC...GCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTGTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443598.6
3UTR-3UTR CCA 90 bp AACTTTCACTCTCTCGATATACTAAGTACTTGGAATCAAGAGACCAGGGTTAGATTTCCAAGGCCTCCTTaGCCTCTGGAGAGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: NFHSLDILSTWNQETRVRFPRPP*PLERWC
Trigger: ACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAA...TCTAACCCTGGTCTCTTGATTCCAAGTACTTAGTATATCGAGAGAGTGAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CCA 90 bp TCACATTACAATAAAGTTATTAAGGTGGAATGGGTTTCTCCTCCAGAAAGGGGTTCTTGGTCCTGGGAGTaGGCAGGGTTCCCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: SHYNKVIKVEWVSPPERGSWSWE*AGFPEE
Trigger: TTCTTCTGGGAACCCTGCCCACTCCCAGGACCAAGA...ACCCCTTTCTGGAGGAGAAACCCATTCCACCTTAATAACTTTATTGTAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR TCA 90 bp TCACATTACAATAAAGTTATTAAGGTGGAATGGGTTTCTCCTCCAGAAAGGGGTTTTGCCGTGACCACGTaGTCACCAGGTGCTCTCTTA +
Preference number: 2 (lower is better)
Translates to: SHYNKVIKVEWVSPPERGFAVTT*SPGALL
Trigger: TAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAA...ACCCCTTTCTGGAGGAGAAACCCATTCCACCTTAATAACTTTATTGTAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR TCA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCAGATGTCACTCTGATGTaGGGGTTTACCCATCTTGTC +
Preference number: 2 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSDVTLM*GFTHLV
Trigger: GACAAGATGGGTAAACCCTCACATCAGAGTGACATC...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR TCA 90 bp ACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCAAGAAGGGAGGATTAAATaGGATGATGCATGTCAGATG +
Preference number: 2 (lower is better)
Translates to: TPWDILISTFLPRQRSEQEGRIK*DDACQM
Trigger: CATCTGACATGCATCATCTCATTTAATCCTCCCTTC...TTGCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR TCA 90 bp AACTTTCACTCTCTCGATATACTAAGTACTTGGAATCAAGAGACCAGGGTTAGAGAAGGGAGGATTAAATaGGATGATGCATGTCAGATG +
Preference number: 2 (lower is better)
Translates to: NFHSLDILSTWNQETRVREGRIK*DDACQM
Trigger: CATCTGACATGCATCATCTCATTTAATCCTCCCTTC...TCTAACCCTGGTCTCTTGATTCCAAGTACTTAGTATATCGAGAGAGTGAAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CCA 72 bp CTCTTGGTGGCTCCGAGCAGCAGGTGCTCGCCAGCATaGGCTCTGAGCAGGGCCACCTGGTCGTCCAGGGGG +
Preference number: 3 (lower is better)
Translates to: LLVAPSSRCSPA*ALSRATWSSRG
Trigger: CCCCCTGGACGACCAGGTGGCCCTGCTCAGAGCCCATGCTGGCGAGCACCTGCTGCTCGGAGCCACCAAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR GCA 72 bp GCAGCTCCTGGAAGGGCAGCACCAGCTCGTCAAGGATaGGTATGGACACCCGGCTCATCTCCGCCAGCTCCG +
Preference number: 3 (lower is better)
Translates to: AAPGRAAPARQG*VWTPGSSPPAP
Trigger: CGGAGCTGGCGGAGATGAGCCGGGTGTCCATACGCATCCTTGACGAGCTGGTGCTGCCCTTCCAGGAGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CCA 72 bp CCTGGAAGGGCAGCACCAGCTCGTCAAGGATGCGTATaGACACCCGGCTCATCTCCGCCAGCTCCGGGCAGT +
Preference number: 3 (lower is better)
Translates to: PGRAAPARQGCV*TPGSSPPAPGS
Trigger: ACTGCCCGGAGCTGGCGGAGATGAGCCGGGTGTCCATACGCATCCTTGACGAGCTGGTGCTGCCCTTCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR GCA 72 bp GGGGCAGCAGCAGAAGGAGGAGCAAGGTGCCCCAAGTaGCACAATTGGACCCAGCCTCACAGGGCTCTGTCT +
Preference number: 3 (lower is better)
Translates to: GAAAEGGARCPK*HNWTQPHRALS
Trigger: AGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGCTGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR TCA 72 bp TTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATaGCAGGGGCTAGGAGAGGAGAAGCACCAGGCTAGG +
Preference number: 3 (lower is better)
Translates to: LDPASQGSVWTP*QGLGEEKHQAR
Trigger: CCTAGCCTGGTGCTTCTCCTCTCCTAGCCCCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR TCA 72 bp ATGGTTCCAGCCTCCCTGCCTTACCGCAGACCAGGCTaGGCCGTCTGGCAGGGATTTCAGGGGCACTTGAGT +
Preference number: 3 (lower is better)
Translates to: MVPASLPYRRPG*AVWQGFQGHLS
Trigger: ACTCAAGTGCCCCTGAAATCCCTGCCAGACGGCTCAGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR GCA 72 bp GGTGCATCGCTGGGGGACCCTCCCAGCAGCATCTCCTaGAACAGGTTGTCAATCTTGGCCATGCCGAAGAGC +
Preference number: 3 (lower is better)
Translates to: GASLGDPPSSIS*NRLSILAMPKS
Trigger: GCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGGTCCCCCAGCGATGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CCA 72 bp CCAGCTCCAGCACAACCCCGAGTGAATGGAACGCTGTaGTCTGTGGTGACCGAGACACAAGGCCACCCTCCT +
Preference number: 3 (lower is better)
Translates to: PAPAQPRVNGTL*SVVTETQGHPP
Trigger: AGGAGGGTGGCCTTGTGTCTCGGTCACCACAGACCACAGCGTTCCATTCACTCGGGGTTGTGCTGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CAA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGCCCCAAGTGCCACAATaGGACCCAGCCTCACAGGGC +
Preference number: 3 (lower is better)
Translates to: PAPCILLEADQDLSLVFQPQVPQ*DPASQG
Trigger: GCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGG...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR TCA 72 bp ATCCTGGGGTCTAATGCTTCCAGAATGCACCTGGAGTaGCGGTCTCCGGAGCAGCCCTCAAACCCAGGCCTG +
Preference number: 3 (lower is better)
Translates to: ILGSNASRMHLE*RSPEQPSNPGL
Trigger: CAGGCCTGGGTTTGAGGGCTGCTCCGGAGACCGTCACTCCAGGTGCATTCTGGAAGCATTAGACCCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR GCA 72 bp CTGGTCGCTCCATCCTGGGGTCTAATGCTTCCAGAATaGACCTGGAGTGACGGTCTCCGGAGCAGCCCTCAA +
Preference number: 3 (lower is better)
Translates to: LVAPSWGLMLPE*TWSDGLRSSPQ
Trigger: TTGAGGGCTGCTCCGGAGACCGTCACTCCAGGTGCATTCTGGAAGCATTAGACCCCAGGATGGAGCGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR GCA 72 bp AATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTaGCTTACCGCAGACCAGGCTGAGCCGTCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: NDHNAQKWFQPP*LTADQAEPSGR
Trigger: CCTGCCAGACGGCTCAGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CCA 72 bp TATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGATGTaGCCCTTAGGCCATGTTCTCGGGCCCTTCATCCTT +
Preference number: 3 (lower is better)
Translates to: YPEQGVKGGSGM*PLGHVLGPFIL
Trigger: AAGGATGAAGGGCCCGAGAACATGGCCTAAGGGCCACATCCCACTGCCACCCTTGACGCCCTGCTCTGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 72 bp GTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTaGGATGTGGCCCTTAGGCCATGTTCTCGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: VLLSRAGRQGWQ*DVALRPCSRAL
Trigger: AAGGGCCCGAGAACATGGCCTAAGGGCCACATCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 72 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTaGACCCAGCCTCACAGGGCTCTGTCTGGACACCAT +
Preference number: 3 (lower is better)
Translates to: AEGGARCPKCHN*TQPHRALSGHH
Trigger: ATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 72 bp GCTCCATCCTGGGGTCTAATGCTTCCAGAATGCACCTaGAGTGACGGTCTCCGGAGCAGCCCTCAAACCCAG +
Preference number: 3 (lower is better)
Translates to: APSWGLMLPECT*SDGLRSSPQTQ
Trigger: CTGGGTTTGAGGGCTGCTCCGGAGACCGTCACTCCAGGTGCATTCTGGAAGCATTAGACCCCAGGATGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CCA 72 bp CGTCCAGGGGGAGCTCGCAGAAAGCTGGGATGTACTTaGCCCACTCAACGAGAACCAGCAGCTGCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: RPGGARRKLGCT*PTQREPAAAPS
Trigger: TGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTTCTGCGAGCTCCCCCTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CCA 72 bp CACCTGCACCTGGGAACGCAGCCGCTTGATCTTCCCTaGATCGCTCAGCCCCTTGGCATCTGGGTCAAAGAA +
Preference number: 3 (lower is better)
Translates to: HLHLGTQPLDLP*IAQPLGIWVKE
Trigger: TTCTTTGACCCAGATGCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCCAGGTGCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CAA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGGTTTCCAAGGCCTCCTaGGCCTCTGGAGAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: PAPCILLEADQDLSLVFQVSKAS*ASGEVV
Trigger: CACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAAC...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CAA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTTTCCAAGGCCTCCTaGGCCTCTGGAGAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAVSKAS*ASGEVV
Trigger: CACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAAC...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CAA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCGGATCGCTCAGCCCCTaGGCATCTGGGTCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: VEGSRKPLNLITVRTQGAGSLSP*ASGSKK
Trigger: CTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATCC...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CAA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCTGGGAACGCAGCCGCTaGATCTTCCCTGGATCGCTC +
Preference number: 3 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAWERSR*IFPGSL
Trigger: GAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCCA...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CAA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCGAGGATGAGGTTGGGTaGGAGGAGAAAGGCGTCTTC +
Preference number: 3 (lower is better)
Translates to: VEGSRKPLNLITVRTQGAEDEVG*EEKGVF
Trigger: GAAGACGCCTTTCTCCTCCAACCCAACCTCATCCTC...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CAA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCCGGAAGCCCCTCAACTaGATCACGGTGAGAACACAG +
Preference number: 3 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSRKPLN*ITVRTQ
Trigger: CTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCG...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CAA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGCGGCACTGGTTCCTCTaGTCTTTGTCCACCACGCAC +
Preference number: 3 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRRHWFL*SLSTTH
Trigger: GTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCG...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CAA 90 bp GTTGCTGAGGTGAGTGGGCATTGTGTTGGCAACGATGACGTTGGTTCCCATATGGCCTGCAGGAGCGCATaGATGGAGGGCAGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VAEVSGHCVGNDDVGSHMACRSA*MEGRLL
Trigger: CAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGGC...CATATGGGAACCAACGTCATCGTTGCCAACACAATGCCCACTCACCTCAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR TCA 72 bp AGAGAACTGACCCCCTGCTCCAACAGATTGTTCCCATaGAGGGCCACTGTTGCCCACGGCACTCCATGGGAC +
Preference number: 3 (lower is better)
Translates to: RELTPCSNRLFP*RATVAHGTPWD
Trigger: GTCCCATGGAGTGCCGTGGGCAACAGTGGCCCTTCATGGGAACAATCTGTTGGAGCAGGGGGTCAGTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 72 bp GCAGGCTGCTGTCCTCATAGCTTGACCTTCGAGTGCTaGTCCGGTCCCGCTCATTCTGGACGGCTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: AGCCPHSLTFEC*SGPAHSGRLPS
Trigger: AGAAGGAAGCCGTCCAGAATGAGCGGGACCGGATCAGCACTCGAAGGTCAAGCTATGAGGACAGCAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR TCA 72 bp CGCATTGATGGAGGGCAGGCTGCTGTCCTCATAGCTTaGCCTTCGAGTGCTGATCCGGTCCCGCTCATTCTG +
Preference number: 3 (lower is better)
Translates to: RIDGGQAAVLIA*PSSADPVPLIL
Trigger: CAGAATGAGCGGGACCGGATCAGCACTCGAAGGTCAAGCTATGAGGACAGCAGCCTGCCCTCCATCAATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR GCA 72 bp CTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTaGCGTGACCACGTGATCACCAGGTGCTCTCTTAGG +
Preference number: 3 (lower is better)
Translates to: LLWDWSWHHVFL*RDHVITRCSLR
Trigger: CCTAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 72 bp GGCGTCTTCCCTCACCACAGCCTTCTAGACCCTGCCTaGTGCCTGGTCCCAGTCAGTGCTTACAACATGTTC +
Preference number: 3 (lower is better)
Translates to: GVFPHHSLLDPA*CLVPVSAYNMF
Trigger: GAACATGTTGTAAGCACTGACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTGTGGTGAGGGAAGACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 72 bp CCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTaGTGTTCCAGACCCTATGCTCTCCAGCAGGCCCTC +
Preference number: 3 (lower is better)
Translates to: PAYSLKLIRTSA*CSRPYALQQAL
Trigger: GAGGGCCTGCTGGAGAGCATAGGGTCTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 72 bp ACCACGCACTGCCGGCTAAATCTGCAGGAGTACATGTaGTTCTTCCGCACGCTCCTCCGGAAGAAGCCCTTG +
Preference number: 3 (lower is better)
Translates to: TTHCRLNLQEYM*FFRTLLRKKPL
Trigger: CAAGGGCTTCTTCCGGAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAGATTTAGCCGGCAGTGCGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR-3UTR CAA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTCGCCAACCTGGGTTaGTTTTCTCGGGTTGAAGGC +
Preference number: 3 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAVANLG*FSRVEG
Trigger: GCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGAC...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CAA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCATGGTTCCTCTTGTCTTaGTCCACCACGCACTGCCGG +
Preference number: 3 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPWFLLS*STTHCR
Trigger: CCGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCA...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR TCA 72 bp AGTGGGCAGGGTTCCCAGAAGAACGAGTCTGGTTTCTaGGGCTGTAGAAGGGAGCCGGAAGCCCCTCAACTT +
Preference number: 3 (lower is better)
Translates to: SGQGSQKNESGF*GCRREPEAPQL
Trigger: AAGTTGAGGGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAACCCTGCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR TCA 72 bp ATTGGGGGCTTGGCTGGGACTGCCGTAGGGATGTGGTaGTTCCTCCCTGACACATTGCCCCAATACTTCTCC +
Preference number: 3 (lower is better)
Translates to: IGGLAGTAVGMW*FLPDTLPQYFS
Trigger: GGAGAAGTATTGGGGCAATGTGTCAGGGAGGAATCACCACATCCCTACGGCAGTCCCAGCCAAGCCCCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 72 bp GGTCGGGGCCACTCACACATCTGTCCGTTGCTGAGGTaGGTGGGCATTGTGTTGGCAACGATGACGTTGGTT +
Preference number: 3 (lower is better)
Translates to: GRGHSHICPLLR*VGIVLATMTLV
Trigger: AACCAACGTCATCGTTGCCAACACAATGCCCACTCACCTCAGCAACGGACAGATGTGTGAGTGGCCCCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR GCA 72 bp AGGCCATGTTCTCGGGCCCTTCATCCTTCCCATTCCTaGTCTGGGACTGGTCCTGGCATCACGTCTTCCTTT +
Preference number: 3 (lower is better)
Translates to: RPCSRALHPSHS*SGTGPGITSSF
Trigger: AAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATGAAGGGCCCGAGAACATGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR GCA 72 bp GAAAGGCGTCTTCCCTCACCACAGCCTTCTAGACCCTaGCTGGTGCCTGGTCCCAGTCAGTGCTTACAACAT +
Preference number: 3 (lower is better)
Translates to: ERRLPSPQPSRP*LVPGPSQCLQH
Trigger: ATGTTGTAAGCACTGACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTGTGGTGAGGGAAGACGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR GCA 72 bp AACTGGATCTGCTCGATCATCTGCCAGGTGATGCTCTaGAAGGTGGGCAGCAGCAGCAGCAGCTCTCCAAAG +
Preference number: 3 (lower is better)
Translates to: NWICSIICQVML*KVGSSSSSSPK
Trigger: CTTTGGAGAGCTGCTGCTGCTGCTGCCCACCTTGCAGAGCATCACCTGGCAGATGATCGAGCAGATCCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CCA 72 bp CCTTCATCCTTCCCATTCCTGCTCTGGGACTGGTCCTaGCATCACGTCTTCCTTTGCCGTGACCACGTGATC +
Preference number: 3 (lower is better)
Translates to: PSSFPFLLWDWS*HHVFLCRDHVI
Trigger: GATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 72 bp GAGGAACACAGTGGGAATGACCACAATGCCCAGAAATaGTTCCAGCCTCCCTGCCTTACCGCAGACCAGGCT +
Preference number: 3 (lower is better)
Translates to: EEHSGNDHNAQK*FQPPCLTADQA
Trigger: AGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR CCA 72 bp TTCTCACAAGCCAGCTCCAGCACAACCCCGAGTGAATaGAACGCTGTGGTCTGTGGTGACCGAGACACAAGG +
Preference number: 3 (lower is better)
Translates to: FSQASSSTTPSE*NAVVCGDRDTR
Trigger: CCTTGTGTCTCGGTCACCACAGACCACAGCGTTCCATTCACTCGGGGTTGTGCTGGAGCTGGCTTGTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CCA 72 bp TCCCCAAGGAGGATGTCCCCATATGTAGGCATCCCATaGTCCAGCCATTGCCGAATGCTGTGGTGTGCTGGT +
Preference number: 3 (lower is better)
Translates to: SPRRMSPYVGIP*SSHCRMLWCAG
Trigger: ACCAGCACACCACAGCATTCGGCAATGGCTGGACCATGGGATGCCTACATATGGGGACATCCTCCTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CAA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGCCCCAAGTCAAAGTCTaGTTATCCAGAGCAGGGCGT +
Preference number: 3 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRPQVKV*LSRAGR
Trigger: ACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGG...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CAA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCATCTGGAGAGGTGGTGTaGGAGAAGACGGGATGGCTG +
Preference number: 3 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPSGEVV*EKTGWL
Trigger: CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGA...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CAA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCGTTTGTTTTCTCGGGTaGAAGGCCTTCAGGGATCCT +
Preference number: 3 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSVCFLG*KAFRDP
Trigger: AGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CAA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTGTCGCCAACCTGGGTTaGTTTTCTCGGGTTGAAGGC +
Preference number: 3 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLVANLG*FSRVEG
Trigger: GCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGAC...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CAA 90 bp AGTGTTGAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACCACTCCAAGTTCCTGTaGCAGTCGCCAACCTGGGTT +
Preference number: 3 (lower is better)
Translates to: SVEQGAGVGPTVSLLPNHHSKFL*QSPTWV
Trigger: AACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTG...GTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTCAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CAA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCCTCCCTGCATACTCCTaGAAGCTGATCAGGACCTCA +
Preference number: 3 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPLPAYS*KLIRTS
Trigger: TGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAG...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CAA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGACAGTCTCCGCTGGGATaGGGGGCTTGGCTGGGACTG +
Preference number: 3 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGQSPLG*GAWLGL
Trigger: CAGTCCCAGCCAAGCCCCCAATCCCAGCGGAGACTG...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CAA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTGCCATGCCGAAGAGCTaGATGAACTGGATCTGCTCG +
Preference number: 3 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLAMPKS*MNWICS
Trigger: CGAGCAGATCCAGTTCATCAAGCTCTTCGGCATGGC...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR TCA 72 bp TGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTaGAGGCCTTCAGGGATCCTCACCCAAGTACCCACC +
Preference number: 3 (lower is better)
Translates to: CCSRQPGFVFSG*RPSGILTQVPT
Trigger: GGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR TCA 72 bp CAGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTaGTGTGAGGGTTTACCCATCTTGTCCTCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: QALGAYSSWMSL*CEGLPILSSPA
Trigger: GGCTGGAGAGGACAAGATGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR TCA 72 bp ACTCTCAGGAGAGCCATGCGGATTTTTAGAAGCTCCTaGGACCCGCCTGAAGATCAGGGTGTCTTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: TLRRAMRIFRSS*DPPEDQGVLVG
Trigger: CCCCACCAAGACACCCTGATCTTCAGGCGGGTCTCAGGAGCTTCTAAAAATCCGCATGGCTCTCCTGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 72 bp GCTCGGAGTGGTGGAGTGACCTGCCCAAGGTTACGCTaGTCAGCAAAACGTGTGCTTCCCAGACCAGAACTT +
Preference number: 3 (lower is better)
Translates to: ARSGGVTCPRLR*SAKRVLPRPEL
Trigger: AAGTTCTGGTCTGGGAAGCACACGTTTTGCTGATCAGCGTAACCTTGGGCAGGTCACTCCACCACTCCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR TCA 72 bp CTGCCCTGGAGGGAGATATCATTCCCACTTTACAGATaGGGCTCGGAGTGGTGGAGTGACCTGCCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: LPWREISFPLYR*GSEWWSDLPKV
Trigger: AACCTTGGGCAGGTCACTCCACCACTCCGAGCCTCATCTGTAAAGTGGGAATGATATCTCCCTCCAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 72 bp CCTTCTAGACCCTGCCTGGTGCCTGGTCCCAGTCAGTaGTTACAACATGTTCCCAGAATGACTGGGGGAATC +
Preference number: 3 (lower is better)
Translates to: PSRPCLVPGPSQ*LQHVPRMTGGI
Trigger: GATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACTGGGACCAGGCACCAGGCAGGGTCTAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 72 bp AGTAAGGCCTCAAGTCATCTCCAGGCGGCTGTCCTTTaGGATGAAGTCGGGGGTTGGACATGGATGAAGGTG +
Preference number: 3 (lower is better)
Translates to: SKASSHLQAAVL*DEVGGWTWMKV
Trigger: CACCTTCATCCATGTCCAACCCCCGACTTCATCCCAAAGGACAGCCGCCTGGAGATGACTTGAGGCCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CCA 72 bp TTTAGTGCAGCCTCAGGCCAATCTTGGTCCTGGGAGTaGGCAGGGTTCCCAGAAGAACGAGTCTGGTTTCTG +
Preference number: 3 (lower is better)
Translates to: FSAASGQSWSWE*AGFPEERVWFL
Trigger: CAGAAACCAGACTCGTTCTTCTGGGAACCCTGCCCACTCCCAGGACCAAGATTGGCCTGAGGCTGCACTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CAA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTCCCCAAGTCAAAGTCTaGTTATCCAGAGCAGGGCGT +
Preference number: 3 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLPQVKV*LSRAGR
Trigger: ACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGG...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CAA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAGAGGATGAGGTTGGGTaGGAGGAGAAAGGCGTCTTC +
Preference number: 3 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPEDEVG*EEKGVF
Trigger: GAAGACGCCTTTCTCCTCCAACCCAACCTCATCCTC...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CAA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAAGCTGGGATGTACTaGGCCCACTCAACGAGAACC +
Preference number: 3 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPKAGMY*AHSTRT
Trigger: GGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTT...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR TCA 72 bp TCTCCTCCAGAAAGGGGTAGATTCCCAGCAGAGAACTaGCCCCCTGCTCCAACAGATTGTTCCCATGAAGGG +
Preference number: 3 (lower is better)
Translates to: SPPERGRFPAEN*PPAPTDCSHEG
Trigger: CCCTTCATGGGAACAATCTGTTGGAGCAGGGGGTCAGTTCTCTGCTGGGAATCTACCCCTTTCTGGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR GCA 72 bp CAGACCCTTGGACCCTCTTGCCATTCTTCCAGATCTTaGCATTGCACTCTCCCCTCATCACTCCCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: QTLGPSCHSSRS*HCTLPSSLPSS
Trigger: TGAAGAGGGGAGTGATGAGGGGAGAGTGCAATGGCAAGATCTGGAAGAATGGCAAGAGGGTCCAAGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 72 bp CGGCACTGGTTCCTCTTGTCTTTGTCCACCACGCACTaGCGGCTAAATCTGCAGGAGTACATGTGGTTCTTC +
Preference number: 3 (lower is better)
Translates to: RHWFLLSLSTTH*RLNLQEYMWFF
Trigger: GAAGAACCACATGTACTCCTGCAGATTTAGCCGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CCA 72 bp CCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTaGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGAT +
Preference number: 3 (lower is better)
Translates to: PLHSKFLLQSPT*VCFLGLKAFRD
Trigger: ATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CAA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGCCCCAAGTCAAAGTCTaGTTATCCAGAGCAGGGCGT +
Preference number: 3 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRPQVKV*LSRAGR
Trigger: ACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGG...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CAA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTCTGGAGAGGTGGTGTaGGAGAAGACGGGATGGCTG +
Preference number: 3 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVSGEVV*EKTGWL
Trigger: CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGA...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR-3UTR CAA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATGTTTCCAAGGCCTCCTaGGCCTCTGGAGAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDVSKAS*ASGEVV
Trigger: CACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAAC...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CAA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCAGAACACAGGGAGCCTTaGGAGAAGCTATTCAGCCAC +
Preference number: 3 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPEHREP*EKLFSH
Trigger: GTGGCTGAATAGCTTCTCCAAAGGCTCCCTGTGTTC...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CAA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATATGGCAGAGAGGGGCTaGACGATTGTGGCGACGGCT +
Preference number: 3 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDMAERG*TIVATA
Trigger: AGCCGTCGCCACAATCGTCAAGCCCCTCTCTGCCAT...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR TCA 72 bp ATGGTCCAGCCATTGCCGAATGCTGTGGTGTGCTGGTaGATGTTAACAACGGGCTCTCCAGGAACAAAAGCC +
Preference number: 3 (lower is better)
Translates to: MVQPLPNAVVCW*MLTTGSPGTKA
Trigger: GGCTTTTGTTCCTGGAGAGCCCGTTGTTAACATTCACCAGCACACCACAGCATTCGGCAATGGCTGGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR TCA 72 bp ATTCCCACTTTACAGATGAGGCTCGGAGTGGTGGAGTaGCCTGCCCAAGGTTACGCTGATCAGCAAAACGTG +
Preference number: 3 (lower is better)
Translates to: IPTLQMRLGVVE*PAQGYADQQNV
Trigger: CACGTTTTGCTGATCAGCGTAACCTTGGGCAGGTCACTCCACCACTCCGAGCCTCATCTGTAAAGTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 72 bp CTTGGAATCAAGAGACCAGGGTTAGATGTCCACCTCTaGCTTCCAAGAGAAGTCACTTCCCCCAAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: LGIKRPGLDVHL*LPREVTSPKPQ
Trigger: CTGAGGCTTGGGGGAAGTGACTTCTCTTGGAAGGCAGAGGTGGACATCTAACCCTGGTCTCTTGATTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CCA 72 bp AGATTCCACATGGATGACATGCTGGTCGCTCCATCCTaGGGTCTAATGCTTCCAGAATGCACCTGGAGTGAC +
Preference number: 3 (lower is better)
Translates to: RFHMDDMLVAPS*GLMLPECTWSD
Trigger: GTCACTCCAGGTGCATTCTGGAAGCATTAGACCCCAGGATGGAGCGACCAGCATGTCATCCATGTGGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CAA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATGGAGTAAGGAAGAGCTaGAGACAGGCCCTGGGAGCT +
Preference number: 3 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDGVRKS*RQALGA
Trigger: AGCTCCCAGGGCCTGTCTCAAGCTCTTCCTTACTCC...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CAA 90 bp CACTTGTACTCCTCATGTAACGGGAGCTCTCACAGTTACTGTGATCTCATTCCACCCATGGTCCAGCCATaGCCGAATGCTGTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: HLYSSCNGSSHSYCDLIPPMVQP*PNAVVC
Trigger: GCACACCACAGCATTCGGCAATGGCTGGACCATGGG...TGGAATGAGATCACAGTAACTGTGAGAGCTCCCGTTACATGAGGAGTACAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CAA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCATAACACATCCCTTTaGTTCACACTGGTCAGTGGC +
Preference number: 3 (lower is better)
Translates to: RATVAHGTPWDILISTFLHNTSL*FTLVSG
Trigger: GCCACTGACCAGTGTGAACAAAAGGGATGTGTTATG...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CAA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTG +
Preference number: 3 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYNRLSI*AMPKSL
Trigger: CAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTT...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR TCA 72 bp CAGAATGTCCTCAAAGCCACCAAGATTCCACATGGATaGCATGCTGGTCGCTCCATCCTGGGGTCTAATGCT +
Preference number: 3 (lower is better)
Translates to: QNVLKATKIPHG*HAGRSILGSNA
Trigger: AGCATTAGACCCCAGGATGGAGCGACCAGCATGTCATCCATGTGGAATCTTGGTGGCTTTGAGGACATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 72 bp CCAGCAAAAGGTTCTGTCTTGAACCTTGGTGGAGGATaGCAGACCCTTGGACCCTCTTGCCATTCTTCCAGA +
Preference number: 3 (lower is better)
Translates to: PAKGSVLNLGGG*QTLGPSCHSSR
Trigger: TCTGGAAGAATGGCAAGAGGGTCCAAGGGTCTGTCATCCTCCACCAAGGTTCAAGACAGAACCTTTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR TCA 72 bp GGCCCTAGGGATCAGGTAGACAGCGAATGGGTGCTCTaGAGCCTGGAGAGTTTAATGGTTAACTTCTCGCTA +
Preference number: 3 (lower is better)
Translates to: GPRDQVDSEWVL*SLESLMVNFSL
Trigger: TAGCGAGAAGTTAACCATTAAACTCTCCAGGCTTCAGAGCACCCATTCGCTGTCTACCTGATCCCTAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CAA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCATTCTTCCTCAATTCTaGCTAGATTCTTACTACCAC +
Preference number: 3 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSILPQF*LDSYYH
Trigger: GTGGTAGTAAGAATCTAGCAAGAATTGAGGAAGAAT...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 72 bp CTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTaGTGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCA +
Preference number: 3 (lower is better)
Translates to: LSQRPGGWSASF*CFSSPLQVPVA
Trigger: TGCAACAGGAACTTGGAGTGGAGAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR GCA 72 bp TGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTaGTCTACCAGCCAGAATTCTACCCTTTCTCAAAGG +
Preference number: 3 (lower is better)
Translates to: WLRLFFGMSHLT*STSQNSTLSQR
Trigger: CCTTTGAGAAAGGGTAGAATTCTGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 72 bp CCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTaGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCC +
Preference number: 3 (lower is better)
Translates to: PQLDHGENTGSL*RSYSATVVKSS
Trigger: GGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 72 bp TTCTGTCTTGAACCTTGGTGGAGGATGACAGACCCTTaGACCCTCTTGCCATTCTTCCAGATCTTGCCATTG +
Preference number: 3 (lower is better)
Translates to: FCLEPWWRMTDP*TLLPFFQILPL
Trigger: CAATGGCAAGATCTGGAAGAATGGCAAGAGGGTCCAAGGGTCTGTCATCCTCCACCAAGGTTCAAGACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CAA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGATTCTTCCTCAATTCTaGCTAGATTCTTACTACCAC +
Preference number: 3 (lower is better)
Translates to: PAPCILLEADQDLSLVFQILPQF*LDSYYH
Trigger: GTGGTAGTAAGAATCTAGCAAGAATTGAGGAAGAAT...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR GCA 72 bp GAATTCTACCCTTTCTCAAAGGCCTGGTGGATGGTCTaGCTCTTTCTGATGCTTTTCCTCTCCACTCCAAGT +
Preference number: 3 (lower is better)
Translates to: EFYPFSKAWWMV*LFLMLFLSTPS
Trigger: ACTTGGAGTGGAGAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTAGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR-3UTR CAA 90 bp TACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGGTTGTTCTTTGCTGAATaGCCAGCACTTAGAACAGTG +
Preference number: 3 (lower is better)
Translates to: YTDIHASIHTHTHTASPRLFFAE*PALRTV
Trigger: CACTGTTCTAAGTGCTGGCAATTCAGCAAAGAACAA...CCTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
3UTR-3UTR CAA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCACTCCCTGCATACTCCTaGAAGCTGATCAGGACCTCA +
Preference number: 3 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSLPAYS*KLIRTS
Trigger: TGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAG...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR-3UTR CAA 90 bp TACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGGCAAAGATCTTGTTCTTaGCTGAATTGCCAGCACTTA +
Preference number: 3 (lower is better)
Translates to: YTDIHASIHTHTHTASPRQRSCS*LNCQHL
Trigger: TAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTG...CCTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
3UTR CCA 72 bp AGCCTTGGAGAGAAGCCCAGTGGCTACAGATCTGGCTaGAGATTCTCAAGTGCATCTCTTGCTTTTATTCTT +
Preference number: 3 (lower is better)
Translates to: SLGEKPSGYRSG*RFSSASLAFIL
Trigger: AAGAATAAAAGCAAGAGATGCACTTGAGAATCTCCAGCCAGATCTGTAGCCACTGGGCTTCTCTCCAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CCA 72 bp TTCAAGCTATCAGTGTGGCACTGGCAAACATGGAGTTaGGAAGAGAAGCTAACAGTCAGTTCTCACAAGCCA +
Preference number: 3 (lower is better)
Translates to: FKLSVWHWQTWS*EEKLTVSSHKP
Trigger: TGGCTTGTGAGAACTGACTGTTAGCTTCTCTTCCCAACTCCATGTTTGCCAGTGCCACACTGATAGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CCA 72 bp CCGGCAATAACCAATTTCAAGCTATCAGTGTGGCACTaGCAAACATGGAGTTGGGAAGAGAAGCTAACAGTC +
Preference number: 3 (lower is better)
Translates to: PAITNFKLSVWH*QTWSWEEKLTV
Trigger: GACTGTTAGCTTCTCTTCCCAACTCCATGTTTGCCAGTGCCACACTGATAGCTTGAAATTGGTTATTGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 72 bp AGGAAGGGAGGATTAAATGAGATGATGCATGTCAGATaGCTTAAGACAGTGCCTGGGAGTAAGGAAGAGCTT +
Preference number: 3 (lower is better)
Translates to: RKGGLNEMMHVR*LKTVPGSKEEL
Trigger: AAGCTCTTCCTTACTCCCAGGCACTGTCTTAAGGCATCTGACATGCATCATCTCATTTAATCCTCCCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
3UTR CCA 72 bp ACCAATTTCAAGCTATCAGTGTGGCACTGGCAAACATaGAGTTGGGAAGAGAAGCTAACAGTCAGTTCTCAC +
Preference number: 3 (lower is better)
Translates to: TNFKLSVWHWQT*SWEEKLTVSSH
Trigger: GTGAGAACTGACTGTTAGCTTCTCTTCCCAACTCCATGTTTGCCAGTGCCACACTGATAGCTTGAAATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CCA 72 bp AACACTCCGGCAATAACCAATTTCAAGCTATCAGTGTaGCACTGGCAAACATGGAGTTGGGAAGAGAAGCTA +
Preference number: 3 (lower is better)
Translates to: NTPAITNFKLSV*HWQTWSWEEKL
Trigger: TAGCTTCTCTTCCCAACTCCATGTTTGCCAGTGCCACACTGATAGCTTGAAATTGGTTATTGCCGGAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CAA 90 bp AACTTTCACTCTCTCGATATACTAAGTACTTGGAATCAAGAGACCAGGGTTAGACCCCAAGTCAAAGTCTaGTTATCCAGAGCAGGGCGT +
Preference number: 3 (lower is better)
Translates to: NFHSLDILSTWNQETRVRPQVKV*LSRAGR
Trigger: ACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGG...TCTAACCCTGGTCTCTTGATTCCAAGTACTTAGTATATCGAGAGAGTGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR-3UTR CAA 90 bp TCACATTACAATAAAGTTATTAAGGTGGAATGGGTTTCTCCTCCAGAAAGGGGTGAACACAGGGAGCCTTaGGAGAAGCTATTCAGCCAC +
Preference number: 3 (lower is better)
Translates to: SHYNKVIKVEWVSPPERGEHREP*EKLFSH
Trigger: GTGGCTGAATAGCTTCTCCAAAGGCTCCCTGTGTTC...ACCCCTTTCTGGAGGAGAAACCCATTCCACCTTAATAACTTTATTGTAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000619550.4
3UTR TCA 72 bp AGTTTAATGGTTAACTTCTCGCTAAAAAGGGGCGCATaGAGAGTTCACTTGTACTCCTCATGTAACGGGAGC +
Preference number: 3 (lower is better)
Translates to: SLMVNFSLKRGA*RVHLYSSCNGS
Trigger: GCTCCCGTTACATGAGGAGTACAAGTGAACTCTTCATGCGCCCCTTTTTAGCGAGAAGTTAACCATTAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR GCA 72 bp AGTTACTGTGATCTCATTCCATTGAATCCTGACATCTaGCCTGGAGGGAGATATCATTCCCACTTTACAGAT +
Preference number: 3 (lower is better)
Translates to: SYCDLIPLNPDI*PGGRYHSHFTD
Trigger: ATCTGTAAAGTGGGAATGATATCTCCCTCCAGGGCAGATGTCAGGATTCAATGGAATGAGATCACAGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGCCACCTGCCCTACCCTaGGCGCCCACCCCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVPPALP*APTPKA
Trigger: GGCCTTCGGGGTGGGCGCCCAGGGTAGGGCAGGTGG...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGTGGCACACAGGGCGCTaGCACCCAGGCTGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLWHTGR*HPGCWA
Trigger: CGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCA...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGCGCCAGCATGGGCTCTaGGCAGGGCCACCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKRQHGL*AGPPGR
Trigger: ACGACCAGGTGGCCCTGCTCAGAGCCCATGCTGGCG...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCCCATCAGGCGGCAGTaGTGGGGGCTCAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAEPIRRQ*WGLRGQ
Trigger: CTGACCCCTGAGCCCCCATCACTGCCGCCTGATGGG...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGAGGGGGTGGTGGGCATaGGGTGCATCGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKRGWWA*GASLGD
Trigger: GTCCCCCAGCGATGCACCCCATGCCCACCACCCCCT...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTAGGGGGCTGGGGGCTCTCTTAGGGGGCTaGGGGGAGCCAGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VFLCRDHVITRCSLRGLGALLGG*GEPVEP
Trigger: GGGCTCCACTGGCTCCCCCCAGCCCCCTAAGAGAGC...CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGCCTCCGCCCTCCCACTaGCTCCTCCCAGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVPPPSH*LLPVPS
Trigger: AGAGGGCACTGGGAGGAGGCAGTGGGAGGGCGGAGG...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp CTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGCACCGTAGTGTTTaGCCGTGGCCCGGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LWDWSWHHVFLCRDHVITRHRSV*PWPGPR
Trigger: GCGGGGACCGGGCCACGGGCAAACACTACGGTGCCT...GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCGTGGTGGGCATGGGGTaGATCGCTGGGGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: LWDWSWHHVFLCRDHVITVVGMG*IAGGPS
Trigger: GGAGGGTCCCCCAGCGATGCACCCCATGCCCACCAC...GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCTAGACCCTGCCTGGTaGCTGGTCCCAGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHLDPAW*LVPVSA
Trigger: AGCACTGACTGGGACCAGGCACCAGGCAGGGTCTAG...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp GTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTAGGGGGCTGGGGCGTAGTGTTTGCCCGTaGCCCGGTCCCCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: VFLCRDHVITRCSLRGLGRSVCP*PGPRRW
Trigger: CCATCTGCGGGGACCGGGCCACGGGCAAACACTACG...CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCCTGAGCAGGGCCACCTaGTCGTCCAGGGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: VEGSRKPLNLITVRTQGALSRAT*SSRGSS
Trigger: CGAGCTCCCCCTGGACGACCAGGTGGCCCTGCTCAG...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp AGTGCTGATCCGGTCCCGCTCATTCTGGACGGCTTCCTTCTTCATGCCAGCCCGAGGTGCTCGCCAGCATaGGCTCTGAGCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SADPVPLILDGFLLHASPRCSPA*ALSRAT
Trigger: GGTGGCCCTGCTCAGAGCCCATGCTGGCGAGCACCT...CGGGCTGGCATGAAGAAGGAAGCCGTCCAGAATGAGCGGGACCGGATCAGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGAGGGGGTGGTGGGCATaGGGTGCATCGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVRGWWA*GASLGD
Trigger: GTCCCCCAGCGATGCACCCCATGCCCACCACCCCCT...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGTGGCTGCCTGTCCCCTaGGTCGGGGCCACTCACACA +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLWLPVP*VGATHT
Trigger: TGTGTGAGTGGCCCCGACCCAGGGGACAGGCAGCCA...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp TGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCTGGCGTGGCCTCTGGAGAGGTaGTGTTGGAGAAGACGGGAT +
Preference number: 4 (lower is better)
Translates to: WRRLPAGAYRAQTLSHLAWPLER*CWRRRD
Trigger: ATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCA...CGCCAGGTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCCCCGAATGTCGCCGTTaGTCCCGGAGACGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAPECRR*SRRRGR
Trigger: CCTCCCCCGTCTCCGGGATCAACGGCGACATTCGGG...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGACGCCAGCATGGGCTCTaGGCAGGGCCACCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGRQHGL*AGPPGR
Trigger: ACGACCAGGTGGCCCTGCTCAGAGCCCATGCTGGCG...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCGCCAGCATGGGCTCTaGGCAGGGCCACCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGRQHGL*AGPPGR
Trigger: ACGACCAGGTGGCCCTGCTCAGAGCCCATGCTGGCG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCTGGCGACATCTGTCCGTTGCTaGGGTGAGTGGGCATTGTGT +
Preference number: 4 (lower is better)
Translates to: WRRLPAGAYRAQTLSHLATSVRC*GEWALC
Trigger: ACACAATGCCCACTCACCTCAGCAACGGACAGATGT...CGCCAGGTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACTCTGTCTGGACACCATaGCAGGGGCTAGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHSVWTP*QGLGEE
Trigger: CTCCTCTCCTAGCCCCTGTCATGGTGTCCAGACAGA...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR GCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGTCCTCCAAGCTCACCTaGACCTGGGAACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRSSKLT*TWERSR
Trigger: GCGGCTGCGTTCCCAGGTGCAGGTGAGCTTGGAGGA...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCCACCCCTCCAGATATaGTCCAGTGATGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHPPLQI*SSDVGG
Trigger: CCCTCCGACATCACTGGAGCATATCTGGAGGGGTGG...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCACCACCTGCCCTACCCTaGGCGCCCACCCCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPPPALP*APTPKA
Trigger: GGCCTTCGGGGTGGGCGCCCAGGGTAGGGCAGGTGG...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
3UTR CAA 72 bp GCGATGCTGGCAATCTTCTTCGCCCGAATGTCGCCGTaGATCCCGGAGACGGGGGAGGTGATCTGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: AMLAIFFARMSP*IPETGEVICRD
Trigger: GTCCCGACAGATCACCTCCCCCGTCTCCGGGATCAACGGCGACATTCGGGCGAAGAAGATTGCCAGCATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGGGCTGTTGGGCGCGTTaGGGTTGGTGCCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLGCWAR*GWCLLM
Trigger: CATCAGAAGGCACCAACCTCAACGCGCCCAACAGCC...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCTGGCACACAGGGCGCTaGCACCCAGGCTGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPWHTGR*HPGCWA
Trigger: CGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCA...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGCCTGCAGGAGCGCATTaGTGGAGGGCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVPAGAH*WRAGCC
Trigger: ACAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGG...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGACCCGAATGTCGCCGTTaGTCCCGGAGACGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGPECRR*SRRRGR
Trigger: CCTCCCCCGTCTCCGGGATCAACGGCGACATTCGGG...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGAGGGAACGCAGCCGCTTaGTCTTCCCTGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGGNAAA*SSLDRS
Trigger: TGAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCC...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCTGTTCCTGCATCAGGTaGGGGTGCAGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LWDWSWHHVFLCRDHVITCSCIR*GCRGWW
Trigger: CCACCACCCCCTGCACCCTCACCTGATGCAGGAACA...GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTGGCAGAGAGGGGCTTaGCGATTGTGGCGACGGCTC +
Preference number: 4 (lower is better)
Translates to: VEGSRKPLNLITVRTQGAWQRGA*RLWRRL
Trigger: GAGCCGTCGCCACAATCGTCAAGCCCCTCTCTGCCA...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp GGGATGTACTTGGCCCACTCAACGAGAACCAGCAGCTGCTCCTTCATGGACTCAAGGCACCGTAGTGTTTaGCCGTGGCCCGGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: GMYLAHSTRTSSCSFMDSRHRSV*PWPGPR
Trigger: GCGGGGACCGGGCCACGGGCAAACACTACGGTGCCT...TGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR GCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGTGCCAGGTGATGCTCTaGAAGGTGGGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKCQVML*KVGSSS
Trigger: GCTGCTGCTGCCCACCTTGCAGAGCATCACCTGGCA...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCGTGGTGGGCATGGGGTaGATCGCTGGGGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPVVGMG*IAGGPS
Trigger: GGAGGGTCCCCCAGCGATGCACCCCATGCCCACCAC...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGATGCTTAGCCCTCCCCTaGCCCCACACTGTGCACACT +
Preference number: 4 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGCLALP*PHTVHT
Trigger: AGTGTGCACAGTGTGGGGGCAGGGGAGGGCTAAGCA...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGCCTCAAACCCAGGCCTaGTTAGCCCTCCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PAPCILLEADQDLSLVFQPQTQA*LALPCP
Trigger: GGGGCAGGGGAGGGCTAAGCAGGCCTGGGTTTGAGG...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCTGCCCTACCCTaGGCGCCCACCCCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYPPALP*APTPKA
Trigger: GGCCTTCGGGGTGGGCGCCCAGGGTAGGGCAGGTGG...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGGCCACCTGCCCTACCCTaGGCGCCCACCCCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: YTDIHASIHTHTHTASPRPPALP*APTPKA
Trigger: GGCCTTCGGGGTGGGCGCCCAGGGTAGGGCAGGTGG...CCTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp TGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCTGGCGACACATCTGCGATGCTaGCAATCTTCTTCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: WRRLPAGAYRAQTLSHLATHLRC*QSSSPE
Trigger: TTCGGGCGAAGAAGATTGCCAGCATCGCAGATGTGT...CGCCAGGTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp GTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTAGGGGGCTGGGGCCGCTTGATCTTCCCTaGATCGCTCAGCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VFLCRDHVITRCSLRGLGPLDLP*IAQPLG
Trigger: GCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCGG...CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGCCGCTTGATCTTCCCTaGATCGCTCAGCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRPLDLP*IAQPLG
Trigger: GCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCGG...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAGGGGGTGGTGGGCATaGGGTGCATCGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPRGWWA*GASLGD
Trigger: GTCCCCCAGCGATGCACCCCATGCCCACCACCCCCT...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGTGGCTGCCTGTCCCCTaGGTCGGGGCCACTCACACA +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGWLPVP*VGATHT
Trigger: TGTGTGAGTGGCCCCGACCCAGGGGACAGGCAGCCA...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACGTCAAGGGTGGCAGTaGGATGTGGCCCTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGRQGWQ*DVALRP
Trigger: TGGCCTAAGGGCCACATCCCACTGCCACCCTTGACG...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGAGGCCAATCTTGGTCCTaGGAGTGGGCAGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGGQSWS*EWAGFP
Trigger: TGGGAACCCTGCCCACTCCCAGGACCAAGATTGGCC...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GAGCCTGCAGTAGCGGCACTGGTTCCTCTTGTCTTTGTCCACCACGCACTGCCGGGCCAATCTTGGTCCTaGGAGTGGGCAGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: EPAVAALVPLVFVHHALPGQSWS*EWAGFP
Trigger: TGGGAACCCTGCCCACTCCCAGGACCAAGATTGGCC...CGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCGCTACTGCAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp GTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTAGGGGGCTGGGGGGACGTGTCTCCCTGTaGAGAACTGTCCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: VFLCRDHVITRCSLRGLGGRVSL*RTVHPS
Trigger: GGAGGGGTGGACAGTTCTCCACAGGGAGACACGTCC...CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGAGGTTGGTGCCTTCTaGTGGGGACGTGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHREVGAF*WGRVIA
Trigger: GGCAATGACACGTCCCCATCAGAAGGCACCAACCTC...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000415691.2
CDS-3UTR TCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCGGCTGTTGGGCGCGTTaGGGTTGGTGCCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: VEGSRKPLNLITVRTQGAGCWAR*GWCLLM
Trigger: CATCAGAAGGCACCAACCTCAACGCGCCCAACAGCC...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp GTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTAGGGGGCTGGGGCCCGGAAGCATTTCTTaGGCCTGCAGTAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: VFLCRDHVITRCSLRGLGPGSIS*ACSSGT
Trigger: AGTGCCGCTACTGCAGGCTCAAGAAATGCTTCCGGG...CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCCCTGCAGGAGCGCATTaGTGGAGGGCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAPAGAH*WRAGCC
Trigger: ACAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGG...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACCCCGAATGTCGCCGTTaGTCCCGGAGACGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HTQPPRGQRSCSLLNCQHPECRR*SRRRGR
Trigger: CCTCCCCCGTCTCCGGGATCAACGGCGACATTCGGG...GTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGGGCTGTCCTTTGGGATaGAGTCGGGGGTTGGACATG +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLGCPLG*SRGLDM
Trigger: CATGTCCAACCCCCGACTTCATCCCAAAGGACAGCC...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGAGGCACCGTAGTGTTTaGCCGTGGCCCGGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRRHRSV*PWPGPR
Trigger: GCGGGGACCGGGCCACGGGCAAACACTACGGTGCCT...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCGGCTTCCTTCTTCATaGCAGCCCGGAAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHRLPSS*QPGSIS
Trigger: AGAAATGCTTCCGGGCTGGCATGAAGAAGGAAGCCG...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR GCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGGACAGGACCTCCGCCTaGAGGAGCGCATTGATGGAG +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVDRTSA*RSALME
Trigger: CTCCATCAATGCGCTCCTGCAGGCGGAGGTCCTGTC...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCGACAGGACCTCCGCCTaGAGGAGCGCATTGATGGAG +
Preference number: 4 (lower is better)
Translates to: LWDWSWHHVFLCRDHVITDRTSA*RSALME
Trigger: CTCCATCAATGCGCTCCTGCAGGCGGAGGTCCTGTC...GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCGCTCCGAGCAGCAGGTaGTCGCCAGCATGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSAPSSR*SPAWAL
Trigger: CAGAGCCCATGCTGGCGAGCACCTGCTGCTCGGAGC...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCCAGCTCGTCAAGGATaGGTATGGACACCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAEPARQG*VWTPGS
Trigger: TGAGCCGGGTGTCCATACGCATCCTTGACGAGCTGG...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACATCCTTCCCATTCCTaGTCTGGGACTGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGHPSHS*SGTGPG
Trigger: GCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCCAGCCTTCTAGACCCTaGCTGGTGCCTGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VEGSRKPLNLITVRTQGAQPSRP*LVPGPS
Trigger: ACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTG...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCCTGCCCCCACACTGTaGACACTGTCCCACCCCCAT +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGPAPTL*TLSHPH
Trigger: ATGGGGGTGGGACAGTGTGCACAGTGTGGGGGCAGG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AGTGTTGAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACCGTAGTGTTTGCCCGTaGCCCGGTCCCCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SVEQGAGVGPTVSLLPNHRSVCP*PGPRRW
Trigger: CCATCTGCGGGGACCGGGCCACGGGCAAACACTACG...GTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTCAACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCACGTAGTGTTTGCCCGTaGCCCGGTCCCCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVARSVCP*PGPRRW
Trigger: CCATCTGCGGGGACCGGGCCACGGGCAAACACTACG...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACTGAGCAGGGCCACCTaGTCGTCCAGGGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPLSRAT*SSRGSS
Trigger: CGAGCTCCCCCTGGACGACCAGGTGGCCCTGCTCAG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGAGGTGCTCGCCAGCATaGGCTCTGAGCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKRCSPA*ALSRAT
Trigger: GGTGGCCCTGCTCAGAGCCCATGCTGGCGAGCACCT...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGTTGGTGATGGTCGGCTaGGGGATGGCAGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRLVMVG*GMAERG
Trigger: GCCCCTCTCTGCCATCCCCCAGCCGACCATCACCAA...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCTTGGTGATGGTCGGCTaGGGGATGGCAGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFALVMVG*GMAERG
Trigger: GCCCCTCTCTGCCATCCCCCAGCCGACCATCACCAA...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGCTCTCTTAGGGGGCTaGGGGGAGCCAGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRALLGG*GEPVEP
Trigger: GGGCTCCACTGGCTCCCCCCAGCCCCCTAAGAGAGC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGGGTGGCAGTGGGATGTaGCCCTTAGGCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLGGSGM*PLGHVL
Trigger: GAGAACATGGCCTAAGGGCCACATCCCACTGCCACC...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCCGTCAAGGGTGGCAGTaGGATGTGGCCCTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LWDWSWHHVFLCRDHVITRQGWQ*DVALRP
Trigger: TGGCCTAAGGGCCACATCCCACTGCCACCCTTGACG...GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGCAGGCGGCTGTCCTTTaGGATGAAGTCGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVQAAVL*DEVGGW
Trigger: CCAACCCCCGACTTCATCCCAAAGGACAGCCGCCTG...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGGGCCTCCTTGGCCTCTaGAGAGGTGGTGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLGLLGL*RGGVGE
Trigger: TTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCC...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGCTTCTAGACCCTGCCTaGTGCCTGGTCCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRLLDPA*CLVPVS
Trigger: ACTGACTGGGACCAGGCACCAGGCAGGGTCTAGAAG...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTGGGCACAGTCTCCGCTaGGATTGGGGGCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLGHSLR*DWGLGW
Trigger: CCAGCCAAGCCCCCAATCCCAGCGGAGACTGTGCCC...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp CTCACACACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAACCCCGCCCCTCCTaGGCTTGGCACGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: LTHTQPPRGQRSCSLLNCQPRPS*AWHGPP
Trigger: GGGAGGTCCGTGCCAAGCCCAGGAGGGGCGGGGTTG...GCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443598.6
3UTR CAA 72 bp AGCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATaGGACCCAGCCTCACAGGGCTCTGTCTGGACACCA +
Preference number: 4 (lower is better)
Translates to: SRRRSKVPQVPQ*DPASQGSVWTP
Trigger: TGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
CDS-3UTR TCA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCGAGGTTGGTGCCTTCTaGTGGGGACGTGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSEVGAF*WGRVIA
Trigger: GGCAATGACACGTCCCCATCAGAAGGCACCAACCTC...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTTGGCACACAGGGCGCTaGCACCCAGGCTGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: HTASPRAKILFFAELPALWHTGR*HPGCWA
Trigger: CGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCA...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGTTGACCTTCGAGTGCTaGTCCGGTCCCGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLLTFEC*SGPAHS
Trigger: AGAATGAGCGGGACCGGATCAGCACTCGAAGGTCAA...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGCCTGCAGGAGCGCATTaGTGGAGGGCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKPAGAH*WRAGCC
Trigger: ACAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGG...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCCGAATGTCGCCGTTaGTCCCGGAGACGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYPECRR*SRRRGR
Trigger: CCTCCCCCGTCTCCGGGATCAACGGCGACATTCGGG...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGCGATCATCTGCCAGGTaGTGCTCTGCAAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVRSSAR*CSARWA
Trigger: TGCCCACCTTGCAGAGCATCACCTGGCAGATGATCG...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTTGTTCCTGCATCAGGTaGGGGTGCAGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLCSCIR*GCRGWW
Trigger: CCACCACCCCCTGCACCCTCACCTGATGCAGGAACA...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AGTGCTGATCCGGTCCCGCTCATTCTGGACGGCTTCCTTCTTCATGCCAGCCCGTGTCCGTTGCTGAGGTaGGTGGGCATTGTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SADPVPLILDGFLLHASPCPLLR*VGIVLA
Trigger: TGCCAACACAATGCCCACTCACCTCAGCAACGGACA...CGGGCTGGCATGAAGAAGGAAGCCGTCCAGAATGAGCGGGACCGGATCAGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCTGGCAGAGAGGGGCTTaGCGATTGTGGCGACGGCTC +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPWQRGA*RLWRRL
Trigger: GAGCCGTCGCCACAATCGTCAAGCCCCTCTCTGCCA...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGTTCCCAGCAGAGAACTaGCCCCCTGCTCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKFPAEN*PPAPTD
Trigger: ATCTGTTGGAGCAGGGGGTCAGTTCTCTGCTGGGAA...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCGTAGGCTGGGTCCAGTaGAGCACTGTAGTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSVGWVQ*STVVGH
Trigger: ATGGCCGACTACAGTGCTGCACTGGACCCAGCCTAC...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GAGCCTGCAGTAGCGGCACTGGTTCCTCTTGTCTTTGTCCACCACGCACTGCCGTTGTCCACCACGCACTaGCGGCTAAATCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EPAVAALVPLVFVHHALPLSTTH*RLNLQE
Trigger: CTCCTGCAGATTTAGCCGGCAGTGCGTGGTGGACAA...CGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCGCTACTGCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR GCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGCTCCGAGCAGCAGGTaGTCGCCAGCATGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRAPSSR*SPAWAL
Trigger: CAGAGCCCATGCTGGCGAGCACCTGCTGCTCGGAGC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACGCTCCGAGCAGCAGGTaGTCGCCAGCATGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HTQPPRGQRSCSLLNCQHAPSSR*SPAWAL
Trigger: CAGAGCCCATGCTGGCGAGCACCTGCTGCTCGGAGC...GTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGCCAGCTCGTCAAGGATaGGTATGGACACCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVPARQG*VWTPGS
Trigger: TGAGCCGGGTGTCCATACGCATCCTTGACGAGCTGG...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCCTCCAAGCTCACCTaGACCTGGGAACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSSSKLT*TWERSR
Trigger: GCGGCTGCGTTCCCAGGTGCAGGTGAGCTTGGAGGA...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CGATTGTGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCCCAGCAGCATCTCCTaGAACAGGTTGTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: RLWRRLPAGAYRAQTLSHPSSIS*NRLSIL
Trigger: CAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGG...GTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCACAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR GCA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAGTGGTGGGCATGGGGTaGATCGCTGGGGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASVVGMG*IAGGPS
Trigger: GGAGGGTCCCCCAGCGATGCACCCCATGCCCACCAC...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGCACGTGATCACCAGGTaGTCTCTTAGGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAPCILLEADQDLSLVFQHVITR*SLRGLG
Trigger: CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTG...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp CTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCCATCCTTCCCATTCCTaGTCTGGGACTGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LWDWSWHHVFLCRDHVITHPSHS*SGTGPG
Trigger: GCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG...GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACACAGCCTTCTAGACCCTaGCTGGTGCCTGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTQPSRP*LVPGPS
Trigger: ACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTG...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGACAGCCTTCTAGACCCTaGCTGGTGCCTGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGQPSRP*LVPGPS
Trigger: ACTGGGACCAGGCACCAGGCAGGGTCTAGAAGGCTG...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGGTGTTCCAGACCCTATaGTCTCCAGCAGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVVFQTL*SPAGPL
Trigger: GAGAGGGCCTGCTGGAGAGCATAGGGTCTGGAACAC...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGTCCACATGGATGACATaGTGGTCGCTCCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAESTWMT*WSLHPG
Trigger: CCCAGGATGGAGCGACCAGCATGTCATCCATGTGGA...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCTGGTTCCAGCCTCCCTaGCTTACCGCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAWFQPP*LTADQA
Trigger: AGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCA...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGGAGCTCGCAGAAAGCTaGGATGTACTTGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAEELAES*DVLGPL
Trigger: GAGTGGGCCAAGTACATCCCAGCTTTCTGCGAGCTC...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCTGAGCAGGGCCACCTaGTCGTCCAGGGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYLSRAT*SSRGSS
Trigger: CGAGCTCCCCCTGGACGACCAGGTGGCCCTGCTCAG...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTCTGAGCAGGGCCACCTaGTCGTCCAGGGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: HTASPRAKILFFAELPALLSRAT*SSRGSS
Trigger: CGAGCTCCCCCTGGACGACCAGGTGGCCCTGCTCAG...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGAGGTGCTCGCCAGCATaGGCTCTGAGCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRRCSPA*ALSRAT
Trigger: GGTGGCCCTGCTCAGAGCCCATGCTGGCGAGCACCT...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACAGGTGCTCGCCAGCATaGGCTCTGAGCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: HTQPPRGQRSCSLLNCQHRCSPA*ALSRAT
Trigger: GGTGGCCCTGCTCAGAGCCCATGCTGGCGAGCACCT...GTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp CTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCCGTCAAGGATGCGTATaGACACCCGGCTCATCTCCG +
Preference number: 4 (lower is better)
Translates to: LWDWSWHHVFLCRDHVITRQGCV*TPGSSP
Trigger: CGGAGATGAGCCGGGTGTCCATACGCATCCTTGACG...GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCATTGGTGATGGTCGGCTaGGGGATGGCAGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVALVMVG*GMAERG
Trigger: GCCCCTCTCTGCCATCCCCCAGCCGACCATCACCAA...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGATTCCCATTCCTGCTCTaGGACTGGTCCTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGFPFLL*DWSWHH
Trigger: GTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAA...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACACAGGCGGCTGTCCTTTaGGATGAAGTCGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTQAAVL*DEVGGW
Trigger: CCAACCCCCGACTTCATCCCAAAGGACAGCCGCCTG...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGTTTCCAAGGCCTCCTTaGCCTCTGGAGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLFPRPP*PLERWC
Trigger: ACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAA...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GAGCCTGCAGTAGCGGCACTGGTTCCTCTTGTCTTTGTCCACCACGCACTGCCGTCTTGGTCCTGGGAGTaGGCAGGGTTCCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: EPAVAALVPLVFVHHALPSWSWE*AGFPEE
Trigger: TTCTTCTGGGAACCCTGCCCACTCCCAGGACCAAGA...CGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCGCTACTGCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGGGATTTCTGGGCACTaGGGCACTGCCTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGGISGH*GTASNH
Trigger: GTGGTTGGAGGCAGTGCCCCAGTGCCCAGAAATCCC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCCCCGGAAGCATTTCTTaGGCCTGCAGTAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAPGSIS*ACSSGT
Trigger: AGTGCCGCTACTGCAGGCTCAAGAAATGCTTCCGGG...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCCGTCTTCCTTTGCCGTaGCCACGTGATCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFARLPLP*PRDHQV
Trigger: CACCTGGTGATCACGTGGTCACGGCAAAGGAAGACG...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCAAGAATGCACCTGGAGTaGCGGTCTCCGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPRMHLE*RSPEQP
Trigger: GGGCTGCTCCGGAGACCGTCACTCCAGGTGCATTCT...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCCCCAAGACAGAGGTCTaGGCAACGCTGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPPKTEV*ATLEGG
Trigger: TCCTCCCTCCAGCGTTGCTCAGACCTCTGTCTTGGG...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGAACAGATTGTTCCCATaGAGGGCCACTGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKNRLFP*RATVAH
Trigger: GTGGGCAACAGTGGCCCTTCATGGGAACAATCTGTT...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTGGCAGATTGAGGTaGCCCAGCAAAAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRAGRLR*PSKRFC
Trigger: ACAGAACCTTTTGCTGGGTCACCTCAATCTGCCAGC...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGACTCGGAGTGGTGGAGTaGCCTGCCCAAGGTTACGCT +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGLGVVE*PAQGYA
Trigger: AGCGTAACCTTGGGCAGGTCACTCCACCACTCCGAG...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp AGTCAGTGCTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCCCTCCGCCCTCCCACTaGCTCCTCCCAGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SQCLQHVPRMTGGIVSKAPPPSH*LLPVPS
Trigger: AGAGGGCACTGGGAGGAGGCAGTGGGAGGGCGGAGG...GGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGTAGGCTGGGTCCAGTaGAGCACTGTAGTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGVGWVQ*STVVGH
Trigger: ATGGCCGACTACAGTGCTGCACTGGACCCAGCCTAC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTCCTCCAAGCTCACCTaGACCTGGGAACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HTQPPRGQRSCSLLNCQHSSKLT*TWERSR
Trigger: GCGGCTGCGTTCCCAGGTGCAGGTGAGCTTGGAGGA...GTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCATGCCAGGTGATGCTCTaGAAGGTGGGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVACQVML*KVGSSS
Trigger: GCTGCTGCTGCCCACCTTGCAGAGCATCACCTGGCA...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGCACGTGATCACCAGGTaGTCTCTTAGGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKHVITR*SLRGLG
Trigger: CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTG...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGCATCACGTCTTCCTTTaGCGTGACCACGTGATCACC +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLHHVFL*RDHVIT
Trigger: GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATG...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGGCAAGGTGCCCCAAGTaGCACAATTGGACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGARCPK*HNWTQP
Trigger: AGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCATTCATAGCTCACTaGATCCTCGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRAFIAH*ILELLG
Trigger: GCCCAGGAGTTCGAGGATGCAGTGAGCTATGAATGC...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp CTCACACACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCGTAGTGTTTGCCCGTaGCCCGGTCCCCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LTHTQPPRGQRSCSLLNCRSVCP*PGPRRW
Trigger: CCATCTGCGGGGACCGGGCCACGGGCAAACACTACG...GCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTGTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGGATCGCTCAGCCCCTTaGCATCTGGGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAEDRSAP*HLGQRR
Trigger: TCTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATC...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCAAGCTCACCTGCACCTaGGAACGCAGCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPKLTCT*ERSRLI
Trigger: GATCAAGCGGCTGCGTTCCCAGGTGCAGGTGAGCTT...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTCCTGCTCTGGGACTaGTCCTGGCATCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: VEGSRKPLNLITVRTQGAFLLWD*SWHHVF
Trigger: GAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTCAGGCGGCTGTCCTTTaGGATGAAGTCGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLQAAVL*DEVGGW
Trigger: CCAACCCCCGACTTCATCCCAAAGGACAGCCGCCTG...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGCCCAAGTGCCACAATTaGACCCAGCCTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRPKCHN*TQPHRA
Trigger: AGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGG...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGTTGGAGAAGACGGGATaGCTGAGCAAGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKLEKTG*LSKVTA
Trigger: TGCTGTCACCTTGCTCAGCCATCCCGTCTTCTCCAA...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTCCAAGGCCTCCTTaGCCTCTGGAGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: VEGSRKPLNLITVRTQGAFPRPP*PLERWC
Trigger: ACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAA...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGATCAGGACCTCAGCCTaGTGTTCCAGACCCTATGCT +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLIRTSA*CSRPYA
Trigger: AGCATAGGGTCTGGAACACCAGGCTGAGGTCCTGAT...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACACTTCCAGAATGCACCTaGAGTGACGGTCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTLPECT*SDGLRS
Trigger: GCTCCGGAGACCGTCACTCCAGGTGCATTCTGGAAG...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGCTGGTCGCTCCATCCTaGGGTCTAATGCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKLVAPS*GLMLPE
Trigger: TTCTGGAAGCATTAGACCCCAGGATGGAGCGACCAG...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCAGATTGGGGGCTTGGCTaGGACTGCCGTAGGGATGTG +
Preference number: 4 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPDWGLG*DCRRDV
Trigger: CACATCCCTACGGCAGTCCCAGCCAAGCCCCCAATC...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGACAACCCCGAGTGAATaGAACGCTGTGGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRTTPSE*NAVVCG
Trigger: ACCACAGACCACAGCGTTCCATTCACTCGGGGTTGT...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CAA 72 bp GTTTCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTaGGAGAAGACGGGATGGCTGAGCAAGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: VSKASLASGEVV*EKTGWLSKVTA
Trigger: TGCTGTCACCTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CAA 72 bp CCCAGAATGACTGGGGGAATCGTTTCCAAGGCCTCCTaGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGA +
Preference number: 4 (lower is better)
Translates to: PRMTGGIVSKAS*ASGEVVLEKTG
Trigger: TCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAACGATTCCCCCAGTCATTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
CDS-3UTR TCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGCCCGGAAGCATTTCTTaGGCCTGCAGTAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKPGSIS*ACSSGT
Trigger: AGTGCCGCTACTGCAGGCTCAAGAAATGCTTCCGGG...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGTTGACCTTCGAGTGCTaGTCCGGTCCCGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGLTFEC*SGPAHS
Trigger: AGAATGAGCGGGACCGGATCAGCACTCGAAGGTCAA...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGCTGTCCTCATAGCTTaGCCTTCGAGTGCTGATCCG +
Preference number: 4 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTAVLIA*PSSADP
Trigger: CGGATCAGCACTCGAAGGTCAAGCTATGAGGACAGC...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGGAGCAGCACGTCCTTaGACACCATGGATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGGAARP*TPWISW
Trigger: CCAAGAGATCCATGGTGTTCAAGGACGTGCTGCTCC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGAGGCTGTCCTTTGGGATaGAGTCGGGGGTTGGACATG +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGGCPLG*SRGLDM
Trigger: CATGTCCAACCCCCGACTTCATCCCAAAGGACAGCC...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCGGCTGTCCTTTGGGATaGAGTCGGGGGTTGGACATG +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPGCPLG*SRGLDM
Trigger: CATGTCCAACCCCCGACTTCATCCCAAAGGACAGCC...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCTGTCTGGACACCATaGCAGGGGCTAGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSSVWTP*QGLGEE
Trigger: CTCCTCTCCTAGCCCCTGTCATGGTGTCCAGACAGA...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCACCCACCCAAGTCCCTaGAGAAGGAGGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFATHPSP*RRRMRL
Trigger: CAACCTCATCCTCCTTCTTCAGGGACTTGGGTGGGT...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGCCGTAGGGATGTGGTaGTTCCTCCCTGACACATTG +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGAVGMW*FLPDTL
Trigger: CAATGTGTCAGGGAGGAATCACCACATCCCTACGGC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATAAGGCTTGGGAGCTCTaGGCAGGGCACAGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYKAWEL*AGHSLR
Trigger: GCGGAGACTGTGCCCTGCTCAGAGCTCCCAAGCCTT...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCTACCGCAGACCAGGCTaGGCCGTCTGGCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: RATVAHGTPWDILISTFLYRRPG*AVWQGF
Trigger: AAATCCCTGCCAGACGGCTCAGCCTGGTCTGCGGTA...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTCTCCTGAGACCCGCCTaGAGATCAGGGTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLLLRPA*RSGCLG
Trigger: ACCAAGACACCCTGATCTTCAGGCGGGTCTCAGGAG...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCAACATTTCCTGGTGCTaGCTAGTGGAGGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSNISWC*LVEGRH
Trigger: GTGCCTTCCCTCCACTAGTCAGCACCAGGAAATGTT...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp CTGGCACGTGCTAGGTTCTCGGTGCCTGAACAAATAGACCATTGCCTTGTTCCCCAAGGAGCTGAGGGGTaGGCTCACTGTGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LARARFSVPEQIDHCLVPQGAEG*AHCVRP
Trigger: AGGCCTCACACAGTGAGCTCACCCCTCAGCTCCTTG...GGGAACAAGGCAATGGTCTATTTGTTCAGGCACCGAGAACCTAGCACGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATGGGGACGTGTCATTaGCCATCGTCAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVMGTCH*PSSTPA
Trigger: TGCAGGTGTTGACGATGGGCAATGACACGTCCCCAT...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000415691.2
CDS-3UTR GCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGCACACACATCTGCGATaGTGGCAATCTTCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVHTHLR*WQSSSP
Trigger: GGGCGAAGAAGATTGCCAGCATCGCAGATGTGTGTG...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGACCAGCTCGTCAAGGATaGGTATGGACACCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGPARQG*VWTPGS
Trigger: TGAGCCGGGTGTCCATACGCATCCTTGACGAGCTGG...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGTGCCAGGTGATGCTCTaGAAGGTGGGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRCQVML*KVGSSS
Trigger: GCTGCTGCTGCCCACCTTGCAGAGCATCACCTGGCA...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGACATCCTTCCCATTCCTaGTCTGGGACTGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGHPSHS*SGTGPG
Trigger: GCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTGCAAGGTGCCCCAAGTaGCACAATTGGACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLARCPK*HNWTQP
Trigger: AGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGCCTGGTCCCAGTCAGTaGTTACAACATGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRPGPSQ*LQHVPR
Trigger: TCTGGGAACATGTTGTAAGCACTGACTGGGACCAGG...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTCTAGACCCTGCCTGGTaGCTGGTCCCAGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPLDPAW*LVPVSA
Trigger: AGCACTGACTGGGACCAGGCACCAGGCAGGGTCTAG...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp AGTGCTGATCCGGTCCCGCTCATTCTGGACGGCTTCCTTCTTCATGCCAGCCCGACTCCAAGTTCCTGTTaGAGTCGCCAACCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SADPVPLILDGFLLHASPTPSSC*SRQPGF
Trigger: AAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGT...CGGGCTGGCATGAAGAAGGAAGCCGTCCAGAATGAGCGGGACCGGATCAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR GCA 90 bp GTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTAGGGGGCTGGGGGCCTGGTGGATGGTCTaGCTCTTTCTGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VFLCRDHVITRCSLRGLGAWWMV*LFLMLF
Trigger: GAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGC...CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGATGCCTTAAGACAGTaGCTGGGAGTAAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRDALRQ*LGVRKS
Trigger: GCTCTTCCTTACTCCCAGGCACTGTCTTAAGGCATC...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGACCCTTGGACCCTCTTaGCATTCTTCCAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAETLGPS*HSSRSC
Trigger: GCAAGATCTGGAAGAATGGCAAGAGGGTCCAAGGGT...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGCCATGGTCCAGCCATTaGCGAATGCTGTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PAPCILLEADQDLSLVFQPWSSH*RMLWCA
Trigger: AGCACACCACAGCATTCGGCAATGGCTGGACCATGG...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GACCACAATGCCCAGAAATGGTTCCAGCCTCCCTGCCTTACCGCAGACCAGGCTTGTCGACGAGGGTTTTaGAGAGTCGCATTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: DHNAQKWFQPPCLTADQACRRGF*RVAFSL
Trigger: CAGGGAGAATGCGACTCTCCAAAACCCTCGTCGACA...AGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCATTTCTGGGCATTGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGACAGGGTGGTGTAGGCTaGGTCCAGTGCAGCACTGTA +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGQGGVG*VQCSTV
Trigger: TACAGTGCTGCACTGGACCCAGCCTACACCACCCTG...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGCAGGGTGGTGTAGGCTaGGTCCAGTGCAGCACTGTA +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKQGGVG*VQCSTV
Trigger: TACAGTGCTGCACTGGACCCAGCCTACACCACCCTG...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGACTGCAGGAGTACATGTaGTTCTTCCGCACGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGLQEYM*FFRTLL
Trigger: GAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAG...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGCGGTCCCGCTCATTCTaGACGGCTTCCTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: PAPCILLEADQDLSLVFQRSRSF*TASFFM
Trigger: CATGAAGAAGGAAGCCGTCCAGAATGAGCGGGACCG...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCCGGTCCCGCTCATTCTaGACGGCTTCCTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPRSRSF*TASFFM
Trigger: CATGAAGAAGGAAGCCGTCCAGAATGAGCGGGACCG...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGACACATCTGCGATGCTaGCAATCTTCTTCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKTHLRC*QSSSPE
Trigger: TTCGGGCGAAGAAGATTGCCAGCATCGCAGATGTGT...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGGAGCTCGCAGAAAGCTaGGATGTACTTGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGELAES*DVLGPL
Trigger: GAGTGGGCCAAGTACATCCCAGCTTTCTGCGAGCTC...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGACGTCAAGGATGCGTATaGACACCCGGCTCATCTCCG +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGRQGCV*TPGSSP
Trigger: CGGAGATGAGCCGGGTGTCCATACGCATCCTTGACG...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGAAAGCTCACCTGCACCTaGGAACGCAGCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGKLTCT*ERSRLI
Trigger: GATCAAGCGGCTGCGTTCCCAGGTGCAGGTGAGCTT...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCCCCAAGTGCCACAATTaGACCCAGCCTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPPKCHN*TQPHRA
Trigger: AGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGG...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGTGGCCTCTGGAGAGGTaGTGTTGGAGAAGACGGGAT +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGWPLER*CWRRRD
Trigger: ATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCA...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCGGCCTCCTTGGCCTCTaGAGAGGTGGTGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSGLLGL*RGGVGE
Trigger: TTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCC...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGTTTCCAAGGCCTCCTTaGCCTCTGGAGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRFPRPP*PLERWC
Trigger: ACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAA...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GGGATGTACTTGGCCCACTCAACGAGAACCAGCAGCTGCTCCTTCATGGACTCACTTCTAGACCCTGCCTaGTGCCTGGTCCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GMYLAHSTRTSSCSFMDSLLDPA*CLVPVS
Trigger: ACTGACTGGGACCAGGCACCAGGCAGGGTCTAGAAG...TGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCACCAAGATTCCACATaGATGACATGCTGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAEHQDST*MTCWSL
Trigger: GAGCGACCAGCATGTCATCCATGTGGAATCTTGGTG...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGCTCATCTTCCATTGCTaGCAGATTGAGGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKLIFHC*QIEVTQ
Trigger: CTGGGTCACCTCAATCTGCCAGCAATGGAAGATGAG...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp CTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCGCATCCTCGAACTCCTaGGCTGAAGCAATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LWDWSWHHVFLCRDHVITASSNS*AEAIFP
Trigger: TGGGAAGATTGCTTCAGCCCAGGAGTTCGAGGATGC...GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAGGGGATGCCTCAATCTaGCGAGACGCAGCGGCAACA +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPGDASI*RDAAAT
Trigger: TGTTGCCGCTGCGTCTCGCCAGATTGAGGCATCCCC...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372920.1
3UTR CAA 72 bp CTGGGGGACCCTCCCAGCAGCATCTCCTGCAACAGGTaGTCAATCTTGGCCATGCCGAAGAGCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: LGDPPSSISCNR*SILAMPKSLMN
Trigger: GTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTTTGACCTTCGAGTGCTaGTCCGGTCCCGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLLTFEC*SGPAHS
Trigger: AGAATGAGCGGGACCGGATCAGCACTCGAAGGTCAA...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGAGCTGTCCTCATAGCTTaGCCTTCGAGTGCTGATCCG +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGAVLIA*PSSADP
Trigger: CGGATCAGCACTCGAAGGTCAAGCTATGAGGACAGC...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACGGGAACGCAGCCGCTTaGTCTTCCCTGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYGNAAA*SSLDRS
Trigger: TGAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCC...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CTCACACACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCGGGAACGCAGCCGCTTaGTCTTCCCTGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: LTHTQPPRGQRSCSLLNCGNAAA*SSLDRS
Trigger: TGAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCC...GCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTGTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCCATACTGGCGGTCGTTaGTGTAGTCCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAHTGGR*CSPPSS
Trigger: TGAGCTTGGAGGACTACATCAACGACCGCCAGTATG...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACGATCATCTGCCAGGTaGTGCTCTGCAAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPRSSAR*CSARWA
Trigger: TGCCCACCTTGCAGAGCATCACCTGGCAGATGATCG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGCGATCATCTGCCAGGTaGTGCTCTGCAAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRRSSAR*CSARWA
Trigger: TGCCCACCTTGCAGAGCATCACCTGGCAGATGATCG...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TGCAAGGTGGGCAGCAGCAGCAGCAGCTCTCCAAAGCGGCCACGCGAGTCATACTTGTGTTGGCAACGATaGCGTTGGTTCCCATATGTT +
Preference number: 4 (lower is better)
Translates to: CKVGSSSSSSPKRPRESYLCWQR*RWFPYV
Trigger: AACATATGGGAACCAACGTCATCGTTGCCAACACAA...GTATGACTCGCGTGGCCGCTTTGGAGAGCTGCTGCTGCTGCTGCCCACCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTTGTCCGTTGCTGAGGTaGGTGGGCATTGTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLCPLLR*VGIVLA
Trigger: TGCCAACACAATGCCCACTCACCTCAGCAACGGACA...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGATGTCCGTTGCTGAGGTaGGTGGGCATTGTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGCPLLR*VGIVLA
Trigger: TGCCAACACAATGCCCACTCACCTCAGCAACGGACA...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAACATCTGTCCGTTGCTaGGGTGAGTGGGCATTGTGT +
Preference number: 4 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTTSVRC*GEWALC
Trigger: ACACAATGCCCACTCACCTCAGCAACGGACAGATGT...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCTGGCAGAGAGGGGCTTaGCGATTGTGGCGACGGCTC +
Preference number: 4 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLWQRGA*RLWRRL
Trigger: GAGCCGTCGCCACAATCGTCAAGCCCCTCTCTGCCA...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGTTTGCCGTGACCACGTaGTCACCAGGTGCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PAPCILLEADQDLSLVFQFAVTT*SPGALL
Trigger: TAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAA...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp CTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCTTTGTTTTCTCGGGTTaGAGGCCTTCAGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: LWDWSWHHVFLCRDHVITFVFSG*RPSGIL
Trigger: GAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAA...GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCCCTGGGTTCAAGTCCTaGCTCAGCCACTTCCTAGTT +
Preference number: 4 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPPGFKS*LSHFLV
Trigger: AACTAGGAAGTGGCTGAGTCAGGACTTGAACCCAGG...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCCTGGGTTCAAGTCCTaGCTCAGCCACTTCCTAGTT +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGPGFKS*LSHFLV
Trigger: AACTAGGAAGTGGCTGAGTCAGGACTTGAACCCAGG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCAAACGAGTCTGGTTTCTaGGGCTGTAGAAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPNESGF*GCRREP
Trigger: CGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTT...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCAGCACAACCCCGAGTaGATGGAACGCTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: RATVAHGTPWDILISTFLQHNPE*MERCGL
Trigger: CAGACCACAGCGTTCCATTCACTCGGGGTTGTGCTG...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGGCTGTGGTGTGCTGGTaGATGTTAACAACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PAPCILLEADQDLSLVFQAVVCW*MLTTGS
Trigger: AGAGCCCGTTGTTAACATTCACCAGCACACCACAGC...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCATTGTCCACCACGCACTaGCGGCTAAATCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPLSTTH*RLNLQE
Trigger: CTCCTGCAGATTTAGCCGGCAGTGCGTGGTGGACAA...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCATTGTCCACCACGCACTaGCGGCTAAATCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVALSTTH*RLNLQE
Trigger: CTCCTGCAGATTTAGCCGGCAGTGCGTGGTGGACAA...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCCGGCTTCCTTCTTCATaGCAGCCCGGAAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFARLPSS*QPGSIS
Trigger: AGAAATGCTTCCGGGCTGGCATGAAGAAGGAAGCCG...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GTCTTTGTCCACCACGCACTGCCGGCTAAATCTGCAGGAGTACATGTGGTTCTTGACAGGACCTCCGCCTaGAGGAGCGCATTGATGGAG +
Preference number: 4 (lower is better)
Translates to: VFVHHALPAKSAGVHVVLDRTSA*RSALME
Trigger: CTCCATCAATGCGCTCCTGCAGGCGGAGGTCCTGTC...AAGAACCACATGTACTCCTGCAGATTTAGCCGGCAGTGCGTGGTGGACAAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR GCA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTGACAGGACCTCCGCCTaGAGGAGCGCATTGATGGAG +
Preference number: 4 (lower is better)
Translates to: HTASPRAKILFFAELPALDRTSA*RSALME
Trigger: CTCCATCAATGCGCTCCTGCAGGCGGAGGTCCTGTC...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGACACACACATCTGCGATaGTGGCAATCTTCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGHTHLR*WQSSSP
Trigger: GGGCGAAGAAGATTGCCAGCATCGCAGATGTGTGTG...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGCCCAGCAGCATCTCCTaGAACAGGTTGTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVPSSIS*NRLSIL
Trigger: CAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGG...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCATCACGTCTTCCTTTaGCGTGACCACGTGATCACC +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGHHVFL*RDHVIT
Trigger: GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGAGAAGGAGGAGCAAGGTaGCCCAAGTGCCACAATTGG +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGEGGAR*PKCHNW
Trigger: CCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTC...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGGAAGCCCAGCTCCCTaGATACTCCTTGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAGSPAP*ILLEAD
Trigger: ATCAGCTTCAAGGAGTATGCAGGGAGCTGGGCTTCC...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGATCCTCCCTGACACATTaGCCCAATACTTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGSSLTH*PNTSPR
Trigger: GCGTGGAGAAGTATTGGGGCAATGTGTCAGGGAGGA...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGGGCTTGGCTGGGACTaGCGTAGGGATGTGGTGATT +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRGLGWD*RRDVVI
Trigger: AATCACCACATCCCTACGGCAGTCCCAGCCAAGCCC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGAAAGGATCGCCCTaGTCTACCCTCATCCCCAAG +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVAVKGSP*STLIPK
Trigger: CTTGGGGATGAGGGTAGAGCAGGGCGATCCTTTCAC...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GAAAGCTGGGATGTACTTGGCCCACTCAACGAGAACCAGCAGCTGCTCCTTCATCAGGGTGGTGTAGGCTaGGTCCAGTGCAGCACTGTA +
Preference number: 4 (lower is better)
Translates to: ESWDVLGPLNENQQLLLHQGGVG*VQCSTV
Trigger: TACAGTGCTGCACTGGACCCAGCCTACACCACCCTG...ATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp GGGATGTACTTGGCCCACTCAACGAGAACCAGCAGCTGCTCCTTCATGGACTCACTGCAGGAGTACATGTaGTTCTTCCGCACGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GMYLAHSTRTSSCSFMDSLQEYM*FFRTLL
Trigger: GAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAG...TGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCACTGCAGGAGTACATGTaGTTCTTCCGCACGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVALQEYM*FFRTLL
Trigger: GAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAG...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACCGTCAAGGATGCGTATaGACACCCGGCTCATCTCCG +
Preference number: 4 (lower is better)
Translates to: HTQPPRGQRSCSLLNCQHRQGCV*TPGSSP
Trigger: CGGAGATGAGCCGGGTGTCCATACGCATCCTTGACG...GTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACACAGCCCCTTGGCATCTaGGTCAAAGAAGATGATGGC +
Preference number: 4 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTQPLGI*VKEDDG
Trigger: GCCATCATCTTCTTTGACCCAGATGCCAAGGGGCTG...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGCCGCTTGATCTTCCCTaGATCGCTCAGCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HCCPRHSMGHSYLNLSPKPLDLP*IAQPLG
Trigger: GCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCGG...CTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAAGCTCACCTGCACCTaGGAACGCAGCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPKLTCT*ERSRLI
Trigger: GATCAAGCGGCTGCGTTCCCAGGTGCAGGTGAGCTT...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CACTTGTACTCCTCATGTAACGGGAGCTCTCACAGTTACTGTGATCTCATTCCAGCTCTCTTAGGGGGCTaGGGGGAGCCAGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HLYSSCNGSSHSYCDLIPALLGG*GEPVEP
Trigger: GGGCTCCACTGGCTCCCCCCAGCCCCCTAAGAGAGC...TGGAATGAGATCACAGTAACTGTGAGAGCTCCCGTTACATGAGGAGTACAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTTTCCCATTCCTGCTCTaGGACTGGTCCTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLFPFLL*DWSWHH
Trigger: GTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAA...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCACGTCAAGGGTGGCAGTaGGATGTGGCCCTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASRQGWQ*DVALRP
Trigger: TGGCCTAAGGGCCACATCCCACTGCCACCCTTGACG...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCACCCAAGTGCCACAATTaGACCCAGCCTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPPKCHN*TQPHRA
Trigger: AGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGG...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGATTGGAGAAGACGGGATaGCTGAGCAAGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGLEKTG*LSKVTA
Trigger: TGCTGTCACCTTGCTCAGCCATCCCGTCTTCTCCAA...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGGCCTCCTTGGCCTCTaGAGAGGTGGTGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRGLLGL*RGGVGE
Trigger: TTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTCTTCTAGACCCTGCCTaGTGCCTGGTCCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPLLDPA*CLVPVS
Trigger: ACTGACTGGGACCAGGCACCAGGCAGGGTCTAGAAG...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAAGGATGAGGTTGGGTTaGAGGAGAAAGGCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGRMRLG*RRKASS
Trigger: GGAAGACGCCTTTCTCCTCCAACCCAACCTCATCCT...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GACCACAATGCCCAGAAATGGTTCCAGCCTCCCTGCCTTACCGCAGACCAGGCTGCTCAGGCTGTTCTTTaGAATGTCCCATCTCACCTG +
Preference number: 4 (lower is better)
Translates to: DHNAQKWFQPPCLTADQAAQAVL*NVPSHL
Trigger: CAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGC...AGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCATTTCTGGGCATTGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCACAATGCCCAGAAATaGTTCCAGCCTCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGHNAQK*FQPPCL
Trigger: AAGGCAGGGAGGCTGGAACCATTTCTGGGCATTGTG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGCCCACGGCACTCCATaGGACATTCTTATCTCAACC +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGAHGTP*DILIST
Trigger: GGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAATCAGGGTGTCTTGGTaGGGAAATTGTGCCCACGCT +
Preference number: 4 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTIRVSW*GNCAHA
Trigger: AGCGTGGGCACAATTTCCCCACCAAGACACCCTGAT...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGAAGATCAGGGTGTCTTaGTGGGGAAATTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVKIRVS*WGNCAH
Trigger: GTGGGCACAATTTCCCCACCAAGACACCCTGATCTT...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGTGGCACTGGCAAACATaGAGTTGGGAAGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRWHWQT*SWEEKL
Trigger: TAGCTTCTCTTCCCAACTCCATGTTTGCCAGTGCCA...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CAA 72 bp CTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTaGAAGGCCTTCAGGGATCCTCACCCAAGTACCCAC +
Preference number: 4 (lower is better)
Translates to: LLQSPTWVCFLG*KAFRDPHPSTH
Trigger: GTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
3UTR CAA 72 bp TCTGAGGCTGTAGAAGGGAGCCGGAAGCCCCTCAACTaGATCACGGTGAGAACACAGGGAGCCTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SEAVEGSRKPLN*ITVRTQGAFGE
Trigger: TTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTACAGCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000619550.4
CDS-3UTR TCA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTCCCGGAAGCATTTCTTaGGCCTGCAGTAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: HTASPRAKILFFAELPALPGSIS*ACSSGT
Trigger: AGTGCCGCTACTGCAGGCTCAAGAAATGCTTCCGGG...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp GAAAGCTGGGATGTACTTGGCCCACTCAACGAGAACCAGCAGCTGCTCCTTCATGCTGTCCTCATAGCTTaGCCTTCGAGTGCTGATCCG +
Preference number: 4 (lower is better)
Translates to: ESWDVLGPLNENQQLLLHAVLIA*PSSADP
Trigger: CGGATCAGCACTCGAAGGTCAAGCTATGAGGACAGC...ATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCGCCAGCATGGGCTCTaGGCAGGGCCACCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLRQHGL*AGPPGR
Trigger: ACGACCAGGTGGCCCTGCTCAGAGCCCATGCTGGCG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGGAGCAGCACGTCCTTaGACACCATGGATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRGAARP*TPWISW
Trigger: CCAAGAGATCCATGGTGTTCAAGGACGTGCTGCTCC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp CTGGCACGTGCTAGGTTCTCGGTGCCTGAACAAATAGACCATTGCCTTGTTCCCGGAGCAGCACGTCCTTaGACACCATGGATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LARARFSVPEQIDHCLVPGAARP*TPWISW
Trigger: CCAAGAGATCCATGGTGTTCAAGGACGTGCTGCTCC...GGGAACAAGGCAATGGTCTATTTGTTCAGGCACCGAGAACCTAGCACGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTCATACTGGCGGTCGTTaGTGTAGTCCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLHTGGR*CSPPSS
Trigger: TGAGCTTGGAGGACTACATCAACGACCGCCAGTATG...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTTTGCCGTGACCACGTaGTCACCAGGTGCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSFAVTT*SPGALL
Trigger: TAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAA...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCGTCTTCCTTTGCCGTaGCCACGTGATCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYRLPLP*PRDHQV
Trigger: CACCTGGTGATCACGTGGTCACGGCAAAGGAAGACG...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACTCTGTCTGGACACCATaGCAGGGGCTAGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYSVWTP*QGLGEE
Trigger: CTCCTCTCCTAGCCCCTGTCATGGTGTCCAGACAGA...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCTTTGTTTTCTCGGGTTaGAGGCCTTCAGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPFVFSG*RPSGIL
Trigger: GAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAA...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCGATGTCACTCTGATGTaGGGGTTTACCCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSDVTLM*GFTHLV
Trigger: GACAAGATGGGTAAACCCTCACATCAGAGTGACATC...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTAACCTTGGTGGAGGATaGCAGACCCTTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPNLGGG*QTLGPS
Trigger: AGAGGGTCCAAGGGTCTGTCATCCTCCACCAAGGTT...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp TATCATTCCCACTTTACAGATGAGGCTCGGAGTGGTGGAGTGACCTGCCCAAGGTCCCAGTGCCCTCTCTaGCTTCCTTTCAAACCGTCC +
Preference number: 4 (lower is better)
Translates to: YHSHFTDEARSGGVTCPRSQCPL*LPFKPS
Trigger: GGACGGTTTGAAAGGAAGGCAGAGAGGGCACTGGGA...CCTTGGGCAGGTCACTCCACCACTCCGAGCCTCATCTGTAAAGTGGGAATGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGAGGCACCGTAGTGTTTaGCCGTGGCCCGGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLRHRSV*PWPGPR
Trigger: GCGGGGACCGGGCCACGGGCAAACACTACGGTGCCT...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGCGGCTTCCTTCTTCATaGCAGCCCGGAAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKRLPSS*QPGSIS
Trigger: AGAAATGCTTCCGGGCTGGCATGAAGAAGGAAGCCG...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp AGTGTTGAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACGAGAACCAGCAGCTaGTCCTTCATGGACTCACAC +
Preference number: 4 (lower is better)
Translates to: SVEQGAGVGPTVSLLPNHTRTSS*SFMDSH
Trigger: GTGTGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGT...GTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTCAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAACGAGAACCAGCAGCTaGTCCTTCATGGACTCACAC +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVATRTSS*SFMDSH
Trigger: GTGTGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGT...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTTCATTGTCATCGATCTaGAGCTCCTGGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLSLSSI*SSWKGS
Trigger: GCTGCCCTTCCAGGAGCTGCAGATCGATGACAATGA...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp ACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAGATGCCAGGTGATGCTCTaGAAGGTGGGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TASPRAKILFFAELPALRCQVML*KVGSSS
Trigger: GCTGCTGCTGCCCACCTTGCAGAGCATCACCTGGCA...TCTAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGCATCACGTCTTCCTTTaGCGTGACCACGTGATCACC +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKHHVFL*RDHVIT
Trigger: GGTGATCACGTGGTCACGGCAAAGGAAGACGTGATG...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCACTCCAAGTTCCTGTTaGAGTCGCCAACCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFATPSSC*SRQPGF
Trigger: AAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGT...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCACAGCCTCCCGTCCTCTaGAGAACTGCTGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVAQPPVL*RTAVFI
Trigger: AATGAACACAGCAGTTCTGCAGAGGACGGGAGGCTG...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGATGCCTTAAGACAGTaGCTGGGAGTAAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTDALRQ*LGVRKS
Trigger: GCTCTTCCTTACTCCCAGGCACTGTCTTAAGGCATC...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCAAGCTGGGATGTACTTaGCCCACTCAACGAGAACCA +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAKLGCT*PTQREP
Trigger: TGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTT...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCGAGCTCGCAGAAAGCTaGGATGTACTTGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: RATVAHGTPWDILISTFLELAES*DVLGPL
Trigger: GAGTGGGCCAAGTACATCCCAGCTTTCTGCGAGCTC...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCACGTCAAGGATGCGTATaGACACCCGGCTCATCTCCG +
Preference number: 4 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASRQGCV*TPGSSP
Trigger: CGGAGATGAGCCGGGTGTCCATACGCATCCTTGACG...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AGTGTTGAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACCAGCCCCTTGGCATCTaGGTCAAAGAAGATGATGGC +
Preference number: 4 (lower is better)
Translates to: SVEQGAGVGPTVSLLPNHQPLGI*VKEDDG
Trigger: GCCATCATCTTCTTTGACCCAGATGCCAAGGGGCTG...GTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTCAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGACAGCCCCTTGGCATCTaGGTCAAAGAAGATGATGGC +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGQPLGI*VKEDDG
Trigger: GCCATCATCTTCTTTGACCCAGATGCCAAGGGGCTG...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCGATCGCTCAGCCCCTTaGCATCTGGGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSDRSAP*HLGQRR
Trigger: TCTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATC...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGATCGCTCAGCCCCTTaGCATCTGGGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVADRSAP*HLGQRR
Trigger: TCTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATC...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGCTCTGGGACTGGTCCTaGCATCACGTCTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRLWDWS*HHVFLC
Trigger: GCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCATTCCTGCTCTGGGACTaGTCCTGGCATCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPFLLWD*SWHHVF
Trigger: GAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTGCTGAGGTGAGTGGGCATTGTGTTGGCAACGATGACGTTGGTTCCCATATGGGTGGCAGTGGGATGTaGCCCTTAGGCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: VAEVSGHCVGNDDVGSHMGGSGM*PLGHVL
Trigger: GAGAACATGGCCTAAGGGCCACATCCCACTGCCACC...CATATGGGAACCAACGTCATCGTTGCCAACACAATGCCCACTCACCTCAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACGGTGGCAGTGGGATGTaGCCCTTAGGCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYGGSGM*PLGHVL
Trigger: GAGAACATGGCCTAAGGGCCACATCCCACTGCCACC...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGGATGAAGTCGGGGGTTaGACATGGATGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRDEVGG*TWMKVK
Trigger: CTTCACCTTCATCCATGTCCAACCCCCGACTTCATC...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCATGGCCTCTGGAGAGGTaGTGTTGGAGAAGACGGGAT +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPWPLER*CWRRRD
Trigger: ATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCA...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCTGTTCCCAGAATGACTaGGGGAATCGTTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPCSQND*GNRFQG
Trigger: GCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACA...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGTTGCAGTCGCCAACCTaGGTTTGTTTTCTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGLQSPT*VCFLGL
Trigger: CAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAA...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCCCTTTCTCAAAGGCCTaGTGGATGGTCTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPPFSKA*WMVCLF
Trigger: AAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGG...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGGCTCAGGCTGTTCTTTaGAATGTCCCATCTCACCTG +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGAQAVL*NVPSHL
Trigger: CAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGC...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGACTACCACTAGGCCTTaGCTCAGGCTGTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRTTTRP*LRLFFG
Trigger: TCCAAAGAACAGCCTGAGCCAAGGCCTAGTGGTAGT...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGCTGTGTTCATTTTCTaGAAGCCCAGCTCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGAVFIF*KPSSLH
Trigger: ATGCAGGGAGCTGGGCTTCCAGAAAATGAACACAGC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCGCTGTGTTCATTTTCTaGAAGCCCAGCTCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPAVFIF*KPSSLH
Trigger: ATGCAGGGAGCTGGGCTTCCAGAAAATGAACACAGC...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCATCTTGGTCCTGGGAGTaGGCAGGGTTCCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPSWSWE*AGFPEE
Trigger: TTCTTCTGGGAACCCTGCCCACTCCCAGGACCAAGA...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGCTCAGTCTCCTCATCTaGAAAGTGGGAGTAATCATG +
Preference number: 4 (lower is better)
Translates to: SKASLASGEVVLEKTGWLLSLLI*KVGVIM
Trigger: CATGATTACTCCCACTTTCCAGATGAGGAGACTGAG...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGTGGCAAACATGGAGTTaGGAAGAGAAGCTAACAGTC +
Preference number: 4 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKWQTWS*EEKLTV
Trigger: GACTGTTAGCTTCTCTTCCCAACTCCATGTTTGCCA...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CAA 72 bp CGAGACACAAGGCCACCCTCCTGTAATAGTTTAGCCTaGGAGAGAAGCCCAGTGGCTACAGATCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RDTRPPSCNSLA*ERSPVATDLAG
Trigger: TCCAGCCAGATCTGTAGCCACTGGGCTTCTCTCCAAGGCTAAACTATTACAGGAGGGTGGCCTTGTGTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CAA 72 bp CCTCCCAGCAGCATCTCCTGCAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTGATGAACTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: PPSSISCNRLSI*AMPKSLMNWIC
Trigger: GCAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp ACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAGAGAGGTTGGTGCCTTCTaGTGGGGACGTGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: TASPRAKILFFAELPALREVGAF*WGRVIA
Trigger: GGCAATGACACGTCCCCATCAGAAGGCACCAACCTC...TCTAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCATGGCACACAGGGCGCTaGCACCCAGGCTGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSWHTGR*HPGCWA
Trigger: CGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCA...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp CTCACACACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCTTGACCTTCGAGTGCTaGTCCGGTCCCGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LTHTQPPRGQRSCSLLNCLTFEC*SGPAHS
Trigger: AGAATGAGCGGGACCGGATCAGCACTCGAAGGTCAA...GCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp ATACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGCGATCATCTGCCAGGTaGTGCTCTGCAAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: IHRYPRIHTYSHTHSLPERSSAR*CSARWA
Trigger: TGCCCACCTTGCAGAGCATCACCTGGCAGATGATCG...CTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTGTGTTGGCAACGATaGCGTTGGTTCCCATATGTT +
Preference number: 4 (lower is better)
Translates to: VEGSRKPLNLITVRTQGALCWQR*RWFPYV
Trigger: AACATATGGGAACCAACGTCATCGTTGCCAACACAA...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCCGTCTTCCTTTGCCGTaGCCACGTGATCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLRLPLP*PRDHQV
Trigger: CACCTGGTGATCACGTGGTCACGGCAAAGGAAGACG...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGGATGTCACTCTGATGTaGGGGTTTACCCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGDVTLM*GFTHLV
Trigger: GACAAGATGGGTAAACCCTCACATCAGAGTGACATC...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGATCCTGGATGTCACTCTaGTGTGAGGGTTTACCCATC +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGSWMSL*CEGLPI
Trigger: GATGGGTAAACCCTCACATCAGAGTGACATCCAGGA...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGCCATTGCTGGCAGATTaGGGTGACCCAGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRPLLAD*GDPAKG
Trigger: ACCTTTTGCTGGGTCACCTCAATCTGCCAGCAATGG...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCCCATCGTCAACACCTaGACATTCTCAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGPIVNT*TFSNSR
Trigger: CCTGGAATTTGAGAATGTGCAGGTGTTGACGATGGG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGCCCATCGTCAACACCTaGACATTCTCAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRPIVNT*TFSNSR
Trigger: CCTGGAATTTGAGAATGTGCAGGTGTTGACGATGGG...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACCGGCTTCCTTCTTCATaGCAGCCCGGAAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: HTQPPRGQRSCSLLNCQHRLPSS*QPGSIS
Trigger: AGAAATGCTTCCGGGCTGGCATGAAGAAGGAAGCCG...GTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCACACACACATCTGCGATaGTGGCAATCTTCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPHTHLR*WQSSSP
Trigger: GGGCGAAGAAGATTGCCAGCATCGCAGATGTGTGTG...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp ACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCAATCCTCCAAGCTCACCTaGACCTGGGAACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TPWDILISTFLPRQRSEQSSKLT*TWERSR
Trigger: GCGGCTGCGTTCCCAGGTGCAGGTGAGCTTGGAGGA...TTGCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGTTGATGAACTGGATCTaGTCGATCATCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRLMNWI*SIICQV
Trigger: CACCTGGCAGATGATCGAGCAGATCCAGTTCATCAA...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GTCTTTGTCCACCACGCACTGCCGGCTAAATCTGCAGGAGTACATGTGGTTCTTGAAGGAGGAGCAAGGTaGCCCAAGTGCCACAATTGG +
Preference number: 4 (lower is better)
Translates to: VFVHHALPAKSAGVHVVLEGGAR*PKCHNW
Trigger: CCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTC...AAGAACCACATGTACTCCTGCAGATTTAGCCGGCAGTGCGTGGTGGACAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR GCA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTCCTGGTCCCAGTCAGTaGTTACAACATGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLPGPSQ*LQHVPR
Trigger: TCTGGGAACATGTTGTAAGCACTGACTGGGACCAGG...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGACTCCAAGTTCCTGTTaGAGTCGCCAACCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKTPSSC*SRQPGF
Trigger: AAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGT...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGATGTCCCATCTCACCTaGTCTACCAGCCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGMSHLT*STSQNS
Trigger: AGAATTCTGGCTGGTAGAGCAGGTGAGATGGGACAT...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCAGAGAACTGACCCCCTaGTCCAACAGATTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSRELTP*SNRLFP
Trigger: TGGGAACAATCTGTTGGAGCAGGGGGTCAGTTCTCT...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCATTCTTCCAGATCTTaGCATTGCACTCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGHSSRS*HCTLPS
Trigger: TGAGGGGAGAGTGCAATGGCAAGATCTGGAAGAATG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp CAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGGAACAAGGCCTCCGTTaGAACGTTATCGAAAACATT +
Preference number: 4 (lower is better)
Translates to: QGLLGLWRGGVGEDGMAEEQGLR*NVIENI
Trigger: AATGTTTTCGATAACGTTGCAACGGAGGCCTTGTTC...CTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp ATACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGCAGGGTGGTGTAGGCTaGGTCCAGTGCAGCACTGTA +
Preference number: 4 (lower is better)
Translates to: IHRYPRIHTYSHTHSLPEQGGVG*VQCSTV
Trigger: TACAGTGCTGCACTGGACCCAGCCTACACCACCCTG...CTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCGGTCCCGCTCATTCTaGACGGCTTCCTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYRSRSF*TASFFM
Trigger: CATGAAGAAGGAAGCCGTCCAGAATGAGCGGGACCG...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCACACATCTGCGATGCTaGCAATCTTCTTCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPTHLRC*QSSSPE
Trigger: TTCGGGCGAAGAAGATTGCCAGCATCGCAGATGTGT...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCAAGCTGGGATGTACTTaGCCCACTCAACGAGAACCA +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSKLGCT*PTQREP
Trigger: TGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTT...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGGGAGCTCGCAGAAAGCTaGGATGTACTTGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: YTDIHASIHTHTHTASPRELAES*DVLGPL
Trigger: GAGTGGGCCAAGTACATCCCAGCTTTCTGCGAGCTC...CCTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp CTGGCACGTGCTAGGTTCTCGGTGCCTGAACAAATAGACCATTGCCTTGTTCCCCAGCCCCTTGGCATCTaGGTCAAAGAAGATGATGGC +
Preference number: 4 (lower is better)
Translates to: LARARFSVPEQIDHCLVPQPLGI*VKEDDG
Trigger: GCCATCATCTTCTTTGACCCAGATGCCAAGGGGCTG...GGGAACAAGGCAATGGTCTATTTGTTCAGGCACCGAGAACCTAGCACGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp CACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACGATCGCTCAGCCCCTTaGCATCTGGGTCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: HTQPPRGQRSCSLLNCQHDRSAP*HLGQRR
Trigger: TCTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATC...GTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp ATACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGAAGCTCACCTGCACCTaGGAACGCAGCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: IHRYPRIHTYSHTHSLPEKLTCT*ERSRLI
Trigger: GATCAAGCGGCTGCGTTCCCAGGTGCAGGTGAGCTT...CTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATTTCCCATTCCTGCTCTaGGACTGGTCCTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYFPFLL*DWSWHH
Trigger: GTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAA...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGATGTTCCCAGAATGACTaGGGGAATCGTTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGCSQND*GNRFQG
Trigger: GCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACA...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGGATGAGGTTGGGTTaGAGGAGAAAGGCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPRMRLG*RRKASS
Trigger: GGAAGACGCCTTTCTCCTCCAACCCAACCTCATCCT...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCATTGCAGTCGCCAACCTaGGTTTGTTTTCTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPLQSPT*VCFLGL
Trigger: CAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAA...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACACATGGATGACATGCTaGTCGCTCCATCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYTWMTC*SLHPGV
Trigger: GACCCCAGGATGGAGCGACCAGCATGTCATCCATGT...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGTTATTAAGGTGGAATaGGTTTCTCCTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRVIKVE*VSPPER
Trigger: CCTTTCTGGAGGAGAAACCCATTCCACCTTAATAAC...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGTTCTGTCTTGAACCTTaGTGGAGGATGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRFCLEP*WRMTDP
Trigger: AGGGTCTGTCATCCTCCACCAAGGTTCAAGACAGAA...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp ACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAGAGCTGTCCTCATAGCTTaGCCTTCGAGTGCTGATCCG +
Preference number: 4 (lower is better)
Translates to: TASPRAKILFFAELPALRAVLIA*PSSADP
Trigger: CGGATCAGCACTCGAAGGTCAAGCTATGAGGACAGC...TCTAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCCTGCAGGAGCGCATTaGTGGAGGGCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLPAGAH*WRAGCC
Trigger: ACAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGATTGTGTTGGCAACGATaGCGTTGGTTCCCATATGTT +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGLCWQR*RWFPYV
Trigger: AACATATGGGAACCAACGTCATCGTTGCCAACACAA...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp GCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCACCCACCCAAGTCCCTaGAGAAGGAGGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ALHGTFLSQPFSQDRGLSTHPSP*RRRMRL
Trigger: CAACCTCATCCTCCTTCTTCAGGGACTTGGGTGGGT...GCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTACCCACCCAAGTCCCTaGAGAAGGAGGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVTHPSP*RRRMRL
Trigger: CAACCTCATCCTCCTTCTTCAGGGACTTGGGTGGGT...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTTTTGTTTTCTCGGGTTaGAGGCCTTCAGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPFVFSG*RPSGIL
Trigger: GAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAA...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCATGCTCGACCCTAAGTaGATTTTAGTGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSMLDPK*ILVQPQ
Trigger: CTGAGGCTGCACTAAAATTCACTTAGGGTCGAGCAT...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCCAAAAGGTTCTGTCTTaGACCTTGGTGGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPQKVLS*TLVEDD
Trigger: GTCATCCTCCACCAAGGTTCAAGACAGAACCTTTTG...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp CACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGCCCTTAAGGAAGAGGTaGAAGGATCGCCCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: HCCPRHSMGHSYLNLSPKPLRKR*KDRPAL
Trigger: TAGAGCAGGGCGATCCTTTCACCTCTTCCTTAAGGG...CTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGATCTCATTCCATTaGATCCTGACATCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: EVSPSQSLVIQSRASRVAVISFH*ILTSAL
Trigger: CAGGGCAGATGTCAGGATTCAATGGAATGAGATCAC...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATATGGGGACGTGTCATTaGCCATCGTCAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYMGTCH*PSSTPA
Trigger: TGCAGGTGTTGACGATGGGCAATGACACGTCCCCAT...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTATGGGGACGTGTCATTaGCCATCGTCAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: HTASPRAKILFFAELPALMGTCH*PSSTPA
Trigger: TGCAGGTGTTGACGATGGGCAATGACACGTCCCCAT...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp ATACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGTTGTCCACCACGCACTaGCGGCTAAATCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: IHRYPRIHTYSHTHSLPELSTTH*RLNLQE
Trigger: CTCCTGCAGATTTAGCCGGCAGTGCGTGGTGGACAA...CTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTCACACACATCTGCGATaGTGGCAATCTTCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: HTASPRAKILFFAELPALHTHLR*WQSSSP
Trigger: GGGCGAAGAAGATTGCCAGCATCGCAGATGTGTGTG...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGGACTCACACACATCTaGGATGCTGGCAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKGLTHI*DAGNLL
Trigger: AAGAAGATTGCCAGCATCGCAGATGTGTGTGAGTCC...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATACGAGAACCAGCAGCTaGTCCTTCATGGACTCACAC +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYTRTSS*SFMDSH
Trigger: GTGTGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGT...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTACGAGAACCAGCAGCTaGTCCTTCATGGACTCACAC +
Preference number: 4 (lower is better)
Translates to: HTASPRAKILFFAELPALTRTSS*SFMDSH
Trigger: GTGTGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGT...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATTCATTGTCATCGATCTaGAGCTCCTGGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYSLSSI*SSWKGS
Trigger: GCTGCCCTTCCAGGAGCTGCAGATCGATGACAATGA...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACTCATTGTCATCGATCTaGAGCTCCTGGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYSLSSI*SSWKGS
Trigger: GCTGCCCTTCCAGGAGCTGCAGATCGATGACAATGA...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACCCAGCAGCATCTCCTaGAACAGGTTGTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPPSSIS*NRLSIL
Trigger: CAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCAAGAGCTTGATGAACTaGATCTGCTCGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAKSLMN*ICSIIC
Trigger: GCAGATGATCGAGCAGATCCAGTTCATCAAGCTCTT...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATGAAGTCGGGGGTTaGACATGGATGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRDEVGG*TWMKVK
Trigger: CTTCACCTTCATCCATGTCCAACCCCCGACTTCATC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTTGTTCCCAGAATGACTaGGGGAATCGTTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPCSQND*GNRFQG
Trigger: GCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACA...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATAGGATGAGGTTGGGTTaGAGGAGAAAGGCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYRMRLG*RRKASS
Trigger: GGAAGACGCCTTTCTCCTCCAACCCAACCTCATCCT...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTCCTTTCTCAAAGGCCTaGTGGATGGTCTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPPFSKA*WMVCLF
Trigger: AAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGG...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGTTCACACTGGTCAGTaGCATTTTCCAGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGVHTGQ*HFPECP
Trigger: AGGACATTCTGGAAAATGCCACTGACCAGTGTGAAC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCAGGATGACAGACCCTTaGACCCTCTTGCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: RATVAHGTPWDILISTFLRMTDP*TLLPFF
Trigger: GAAGAATGGCAAGAGGGTCCAAGGGTCTGTCATCCT...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTACATCTGTCCGTTGCTaGGGTGAGTGGGCATTGTGT +
Preference number: 4 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVTSVRC*GEWALC
Trigger: ACACAATGCCCACTCACCTCAGCAACGGACAGATGT...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR TCA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCATCCTGGATGTCACTCTaGTGTGAGGGTTTACCCATC +
Preference number: 4 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASSWMSL*CEGLPI
Trigger: GATGGGTAAACCCTCACATCAGAGTGACATCCAGGA...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATAACGAGTCTGGTTTCTaGGGCTGTAGAAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDNESGF*GCRREP
Trigger: CGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTT...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAATGCTCGACCCTAAGTaGATTTTAGTGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPMLDPK*ILVQPQ
Trigger: CTGAGGCTGCACTAAAATTCACTTAGGGTCGAGCAT...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACAAGATTCCACATGGATaGCATGCTGGTCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYKIPHG*HAGRSI
Trigger: GATGGAGCGACCAGCATGTCATCCATGTGGAATCTT...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGACTCGAACTCCTGGGCTaGAGCAATCTTCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGLELLG*SNLPTS
Trigger: TGAGGTGGGAAGATTGCTTCAGCCCAGGAGTTCGAG...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCACGCTGTGGTCTGTGGTaGCCGAGACACAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSRCGLW*PRHKAT
Trigger: GGTGGCCTTGTGTCTCGGTCACCACAGACCACAGCG...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCACCCATCGTCAACACCTaGACATTCTCAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPPIVNT*TFSNSR
Trigger: CCTGGAATTTGAGAATGTGCAGGTGTTGACGATGGG...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp CTGGCACGTGCTAGGTTCTCGGTGCCTGAACAAATAGACCATTGCCTTGTTCCCGGACTCACACACATCTaGGATGCTGGCAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LARARFSVPEQIDHCLVPGLTHI*DAGNLL
Trigger: AAGAAGATTGCCAGCATCGCAGATGTGTGTGAGTCC...GGGAACAAGGCAATGGTCTATTTGTTCAGGCACCGAGAACCTAGCACGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTCCCAGCAGCATCTCCTaGAACAGGTTGTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: HTASPRAKILFFAELPALPSSIS*NRLSIL
Trigger: CAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGG...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp CACTTGTACTCCTCATGTAACGGGAGCTCTCACAGTTACTGTGATCTCATTCCAGCAAGGTGCCCCAAGTaGCACAATTGGACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HLYSSCNGSSHSYCDLIPARCPK*HNWTQP
Trigger: AGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC...TGGAATGAGATCACAGTAACTGTGAGAGCTCCCGTTACATGAGGAGTACAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCCGTCCTCTGCAGAACTaGTGTGTTCATTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSRPLQN*CVHFLE
Trigger: TTCCAGAAAATGAACACAGCAGTTCTGCAGAGGACG...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCCGTCCTCTGCAGAACTaGTGTGTTCATTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPRPLQN*CVHFLE
Trigger: TTCCAGAAAATGAACACAGCAGTTCTGCAGAGGACG...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp GAAAGCTGGGATGTACTTGGCCCACTCAACGAGAACCAGCAGCTGCTCCTTCATATGATGCATGTCAGATaGCTTAAGACAGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ESWDVLGPLNENQQLLLHMMHVR*LKTVPG
Trigger: CCCAGGCACTGTCTTAAGGCATCTGACATGCATCAT...ATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAAGCTGGGATGTACTTaGCCCACTCAACGAGAACCA +
Preference number: 4 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASKLGCT*PTQREP
Trigger: TGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTT...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAAGCTGGGATGTACTTaGCCCACTCAACGAGAACCA +
Preference number: 4 (lower is better)
Translates to: HTASPRAKILFFAELPALKLGCT*PTQREP
Trigger: TGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTT...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCCGCTTGATCTTCCCTaGATCGCTCAGCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLPLDLP*IAQPLG
Trigger: GCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCGG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCAAAGAGCTTGATGAACTaGATCTGCTCGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPKSLMN*ICSIIC
Trigger: GCAGATGATCGAGCAGATCCAGTTCATCAAGCTCTT...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATCTCTGGGACTGGTCCTaGCATCACGTCTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDLWDWS*HHVFLC
Trigger: GCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp CACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACTACCACTAGGCCTTaGCTCAGGCTGTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HCCPRHSMGHSYLNLSPKTTTRP*LRLFFG
Trigger: TCCAAAGAACAGCCTGAGCCAAGGCCTAGTGGTAGT...CTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTATCAGGACCTCAGCCTaGTGTTCCAGACCCTATGCT +
Preference number: 4 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVIRTSA*CSRPYA
Trigger: AGCATAGGGTCTGGAACACCAGGCTGAGGTCCTGAT...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAACACAGGGAGCCTTTaGAGAAGCTATTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPNTGSL*RSYSAT
Trigger: AGTGGCTGAATAGCTTCTCCAAAGGCTCCCTGTGTT...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp CACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGTGTCTTGAACCTTGGTaGAGGATGACAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: HCCPRHSMGHSYLNLSPKCLEPW*RMTDPW
Trigger: CCAAGGGTCTGTCATCCTCCACCAAGGTTCAAGACA...CTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCAGGCTACAGATCTGGCTaGAGATTCTCAAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPGYRSG*RFSSAS
Trigger: AGATGCACTTGAGAATCTCCAGCCAGATCTGTAGCC...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATTGGAGAGAAGCCCAGTaGCTACAGATCTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDWREAQ*LQIWLE
Trigger: CTCCAGCCAGATCTGTAGCCACTGGGCTTCTCTCCA...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AGTCAGTGCTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCGTGAATGGAACGCTGTaGTCTGTGGTGACCGAGACA +
Preference number: 4 (lower is better)
Translates to: SQCLQHVPRMTGGIVSKAVNGTL*SVVTET
Trigger: TGTCTCGGTCACCACAGACCACAGCGTTCCATTCAC...GGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATTATGTAGGCATCCCATaGTCCAGCCATTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYYVGIP*SSHCRM
Trigger: CATTCGGCAATGGCTGGACCATGGGATGCCTACATA...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCACGCGCTTGTCCCCGATaGCGGCAGCATGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSRACPR*RQHEQG
Trigger: GCCTTGTTCATGCTGCCGCCATCGGGGACAAGCGCG...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CAA 72 bp TGCAACAGGTTGTCAATCTTGGCCATGCCGAAGAGCTaGATGAACTGGATCTGCTCGATCATCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: CNRLSILAMPKS*MNWICSIICQV
Trigger: CACCTGGCAGATGATCGAGCAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR TCA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCAGGGAACGCAGCCGCTTaGTCTTCCCTGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSGNAAA*SSLDRS
Trigger: TGAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCC...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGACATACTGGCGGTCGTTaGTGTAGTCCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGHTGGR*CSPPSS
Trigger: TGAGCTTGGAGGACTACATCAACGACCGCCAGTATG...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGATTTGCCGTGACCACGTaGTCACCAGGTGCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGFAVTT*SPGALL
Trigger: TAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAA...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAAGGGAGGATTAAATaGGATGATGCATGTCAGATG +
Preference number: 4 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKEGRIK*DDACQM
Trigger: CATCTGACATGCATCATCTCATTTAATCCTCCCTTC...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATATTTTTAGAAGCTCCTaGGACCCGCCTGAAGATCAG +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYIFRSS*DPPEDQ
Trigger: CTGATCTTCAGGCGGGTCTCAGGAGCTTCTAAAAAT...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATGGACTCACACACATCTaGGATGCTGGCAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYGLTHI*DAGNLL
Trigger: AAGAAGATTGCCAGCATCGCAGATGTGTGTGAGTCC...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp GTCTTTGTCCACCACGCACTGCCGGCTAAATCTGCAGGAGTACATGTGGTTCTTGGACTCACACACATCTaGGATGCTGGCAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: VFVHHALPAKSAGVHVVLGLTHI*DAGNLL
Trigger: AAGAAGATTGCCAGCATCGCAGATGTGTGTGAGTCC...AAGAACCACATGTACTCCTGCAGATTTAGCCGGCAGTGCGTGGTGGACAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR GCA 90 bp AACTTTCACTCTCTCGATATACTAAGTACTTGGAATCAAGAGACCAGGGTTAGAGCTCCGAGCAGCAGGTaGTCGCCAGCATGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: NFHSLDILSTWNQETRVRAPSSR*SPAWAL
Trigger: CAGAGCCCATGCTGGCGAGCACCTGCTGCTCGGAGC...TCTAACCCTGGTCTCTTGATTCCAAGTACTTAGTATATCGAGAGAGTGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCCAGCTCGTCAAGGATaGGTATGGACACCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLPARQG*VWTPGS
Trigger: TGAGCCGGGTGTCCATACGCATCCTTGACGAGCTGG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCAGCAAAACGTGTaGTTCCCAGACCAGAACTTT +
Preference number: 4 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRDQQNV*FPDQNF
Trigger: AAAGTTCTGGTCTGGGAAGCACACGTTTTGCTGATC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp ACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAGAACACATCTGCGATGCTaGCAATCTTCTTCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: TASPRAKILFFAELPALRTHLRC*QSSSPE
Trigger: TTCGGGCGAAGAAGATTGCCAGCATCGCAGATGTGT...TCTAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCAAAGAGCTTGATGAACTaGATCTGCTCGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPKSLMN*ICSIIC
Trigger: GCAGATGATCGAGCAGATCCAGTTCATCAAGCTCTT...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp ACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCAACTCTGGGACTGGTCCTaGCATCACGTCTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: TPWDILISTFLPRQRSEQLWDWS*HHVFLC
Trigger: GCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAG...TTGCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp CACTTGTACTCCTCATGTAACGGGAGCTCTCACAGTTACTGTGATCTCATTCCATTCCTGCTCTGGGACTaGTCCTGGCATCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: HLYSSCNGSSHSYCDLIPFLLWD*SWHHVF
Trigger: GAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA...TGGAATGAGATCACAGTAACTGTGAGAGCTCCCGTTACATGAGGAGTACAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTGCAGTCGCCAACCTaGGTTTGTTTTCTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVLQSPT*VCFLGL
Trigger: CAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAA...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATAACACAGGGAGCCTTTaGAGAAGCTATTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYNTGSL*RSYSAT
Trigger: AGTGGCTGAATAGCTTCTCCAAAGGCTCCCTGTGTT...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTCCCTTTTGTTCACACTaGTCAGTGGCATTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPPFCSH*SVAFSR
Trigger: TCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGG...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACACCTCCATAAAGTTATTAAGGTaGAATGGGTTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EQGAGVGPTVSLLPNHTSIKLLR*NGFLLQ
Trigger: CTGGAGGAGAAACCCATTCCACCTTAATAACTTTAT...GGAGGTGTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
3UTR CAA 72 bp CTTTCTGATGCTTTTCCTCTCCACTCCAAGTTCCTGTaGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: LSDAFPLHSKFL*QSPTWVCFLGL
Trigger: CAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCATCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000619550.4
CDS-3UTR TCA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCAGAAGGGAGGATTAAATaGGATGATGCATGTCAGATG +
Preference number: 4 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPEGRIK*DDACQM
Trigger: CATCTGACATGCATCATCTCATTTAATCCTCCCTTC...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR TCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGAAGCGAATGGGTGCTCTaGAGCCTGGAGAGTTTAATG +
Preference number: 4 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGSEWVL*SLESLM
Trigger: CATTAAACTCTCCAGGCTTCAGAGCACCCATTCGCT...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp AGTCAGTGCTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCTTGATGAACTGGATCTaGTCGATCATCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SQCLQHVPRMTGGIVSKALMNWI*SIICQV
Trigger: CACCTGGCAGATGATCGAGCAGATCCAGTTCATCAA...GGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR GCA 90 bp ACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAGATTGATGAACTGGATCTaGTCGATCATCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TASPRAKILFFAELPALRLMNWI*SIICQV
Trigger: CACCTGGCAGATGATCGAGCAGATCCAGTTCATCAA...TCTAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATCCTGGTCCCAGTCAGTaGTTACAACATGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDPGPSQ*LQHVPR
Trigger: TCTGGGAACATGTTGTAAGCACTGACTGGGACCAGG...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATGCCTGGTGGATGGTCTaGCTCTTTCTGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDAWWMV*LFLMLF
Trigger: GAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGC...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCATGTCCCATCTCACCTaGTCTACCAGCCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLMSHLT*STSQNS
Trigger: AGAATTCTGGCTGGTAGAGCAGGTGAGATGGGACAT...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCATATCAGCAAACAGGATaGTCGACCCTAAGTGAATTT +
Preference number: 4 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPYQQTG*STLSEF
Trigger: AAATTCACTTAGGGTCGAGCATCCTGTTTGCTGATA...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR GCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGATCCAGATCTTGCCATTaGACTCTCCCCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGSRSCH*TLPSSL
Trigger: GAGTGATGAGGGGAGAGTGCAATGGCAAGATCTGGA...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTCGGCAACAAAATCATTaGCCATCGTCAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVRQQNH*PSSTPA
Trigger: TGCAGGTGTTGACGATGGGCAATGATTTTGTTGCCG...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCTGCAGGAGTACATGTaGTTCTTCCGCACGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLLQEYM*FFRTLL
Trigger: GAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCGGTCCCGCTCATTCTaGACGGCTTCCTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLRSRSF*TASFFM
Trigger: CATGAAGAAGGAAGCCGTCCAGAATGAGCGGGACCG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp CTCACACACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCAAGAGCTTGATGAACTaGATCTGCTCGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: LTHTQPPRGQRSCSLLNCKSLMN*ICSIIC
Trigger: GCAGATGATCGAGCAGATCCAGTTCATCAAGCTCTT...GCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTGTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CCA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATGATGAAGTCGGGGGTTaGACATGGATGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDDEVGG*TWMKVK
Trigger: CTTCACCTTCATCCATGTCCAACCCCCGACTTCATC...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGATATACTAAGTACTTaGAATCAAGAGACCAGGGTT +
Preference number: 4 (lower is better)
Translates to: HPSHSCSGTGPGITSSFADILST*NQETRV
Trigger: AACCCTGGTCTCTTGATTCCAAGTACTTAGTATATC...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp GCACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCTTATATTGCTCTGGCTaGTCTCGAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ALHGTFLSQPFSQDRGLSLYCSG*SRTPEL
Trigger: GAGCTCAGGAGTTCGAGACCAGCCAGAGCAATATAA...GCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp AGTCAGTGCTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCCTATCAGTGTGGCACTaGCAAACATGGAGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SQCLQHVPRMTGGIVSKALSVWH*QTWSWE
Trigger: TTCCCAACTCCATGTTTGCCAGTGCCACACTGATAG...GGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCATACTGGCGGTCGTTaGTGTAGTCCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLHTGGR*CSPPSS
Trigger: TGAGCTTGGAGGACTACATCAACGACCGCCAGTATG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR TCA 90 bp CACTTGTACTCCTCATGTAACGGGAGCTCTCACAGTTACTGTGATCTCATTCCAAAGAGCGTTCATTTCTaGCCCTCTCCTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HLYSSCNGSSHSYCDLIPKSVHF*PSPLLC
Trigger: ACAGAGGAGAGGAGAGGGTCAGAAATGAACGCTCTT...TGGAATGAGATCACAGTAACTGTGAGAGCTCCCGTTACATGAGGAGTACAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCAGCACTTAGAACAGTaGCTGGCACGTGCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLQHLEQ*LARARF
Trigger: GAACCTAGCACGTGCCAGTCACTGTTCTAAGTGCTG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGTCATTGTCATCGATCTaGAGCTCCTGGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLSLSSI*SSWKGS
Trigger: GCTGCCCTTCCAGGAGCTGCAGATCGATGACAATGA...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGAATGATGCATGTCAGATaGCTTAAGACAGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGMMHVR*LKTVPG
Trigger: CCCAGGCACTGTCTTAAGGCATCTGACATGCATCAT...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATCTCTCAGGAGAGCCATaGGGATTTTTAGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDLSGEP*GFLEAP
Trigger: AGGAGCTTCTAAAAATCCGCATGGCTCTCCTGAGAG...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATTATCAGCAAACAGGATaGTCGACCCTAAGTGAATTT +
Preference number: 4 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYYQQTG*STLSEF
Trigger: AAATTCACTTAGGGTCGAGCATCCTGTTTGCTGATA...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CCA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCATTGGAGAAGACGGGATaGCTGAGCAAGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSLEKTG*LSKVTA
Trigger: TGCTGTCACCTTGCTCAGCCATCCCGTCTTCTCCAA...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CCA 90 bp TCACATTACAATAAAGTTATTAAGGTGGAATGGGTTTCTCCTCCAGAAAGGGGTAGGTCTGAGCAACGCTaGAGGGAGGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SHYNKVIKVEWVSPPERGRSEQR*REEVEE
Trigger: TTCCTCCACCTCCTCCCTCCAGCGTTGCTCAGACCT...ACCCCTTTCTGGAGGAGAAACCCATTCCACCTTAATAACTTTATTGTAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp GCAAGACCTAATGACATTCACACCCACAGAAAGATGTGGGTCGTTCTGATGGGAAACCACTTGCTTTTATaGAATGTCCCCACAGCTACT +
Preference number: 4 (lower is better)
Translates to: ARPNDIHTHRKMWVVLMGNHLLL*NVPTAT
Trigger: AGTAGCTGTGGGGACATTTCATAAAAGCAAGTGGTT...TCCCATCAGAACGACCCACATCTTTCTGTGGGTGTGAATGTCATTAGGTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCCCATCGTCAACACCTaGACATTCTCAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLPIVNT*TFSNSR
Trigger: CCTGGAATTTGAGAATGTGCAGGTGTTGACGATGGG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR GCA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCAGCCTGGTGGATGGTCTaGCTCTTTCTGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSAWWMV*LFLMLF
Trigger: GAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGC...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp CACTTGTACTCCTCATGTAACGGGAGCTCTCACAGTTACTGTGATCTCATTCCATTGAATCCTGACATCTaGCCTGGAGGGAGATATCAT +
Preference number: 4 (lower is better)
Translates to: HLYSSCNGSSHSYCDLIPLNPDI*PGGRYH
Trigger: ATGATATCTCCCTCCAGGGCAGATGTCAGGATTCAA...TGGAATGAGATCACAGTAACTGTGAGAGCTCCCGTTACATGAGGAGTACAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR TCA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCACTAAAAAGGGGCGCATaGAGAGTTCACTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSLKRGA*RVHLYS
Trigger: GGAGTACAAGTGAACTCTTCATGCGCCCCTTTTTAG...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp AACTTTCACTCTCTCGATATACTAAGTACTTGGAATCAAGAGACCAGGGTTAGACAGCCTCCCGTCCTCTaGAGAACTGCTGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: NFHSLDILSTWNQETRVRQPPVL*RTAVFI
Trigger: AATGAACACAGCAGTTCTGCAGAGGACGGGAGGCTG...TCTAACCCTGGTCTCTTGATTCCAAGTACTTAGTATATCGAGAGAGTGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR GCA 90 bp ATAACACATCCCTTTTGTTCACACTGGTCAGTGGCATTTTCCAGAATGTCCTCACTACTCATCTTCCATTaGTGGCAGATTGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: ITHPFCSHWSVAFSRMSSLLIFH*WQIEVT
Trigger: GGTCACCTCAATCTGCCAGCAATGGAAGATGAGTAG...TGAGGACATTCTGGAAAATGCCACTGACCAGTGTGAACAAAAGGGATGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS CCA 90 bp GGCGCGTTCACGCTGACCATGGCCAAGCCCACCCAGCCGGAGAGCTaGGGGCATGGAGGAGCAGGGGCCCGCTCACAGCAGCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: GAFTLTMAKPTQPES*GHGGAGARSQQQHS
Trigger: GCTGTGCTGCTGCTGTGAGCGGGCCCCTGCTCCTCCATGCCCCCAGCTCTCCGGCTGGGTGGGCTTGGCCATGGTCAGCGTGAACGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316673.8
CDS GCA 90 bp GGCCATGTCCATGTCGACGAGGGTTTTGGAGAGTCGCATTCTCCCTaGCTCCACGCCGCGGCCACCTGCCCTACCCTGGGCGCCCACCCC +
Preference number: 5 (lower is better)
Translates to: GHVHVDEGFGESHSP*LHAAATCPTLGAHP
Trigger: GGGGTGGGCGCCCAGGGTAGGGCAGGTGGCCGCGGCGTGGAGGCAGGGAGAATGCGACTCTCCAAAACCCTCGTCGACATGGACATGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000443598.6
CDS CCA 90 bp CCAGTGCAGCACTGTAGTCGGCCATGTCCATGTCGACGAGGGTTTTaGAGAGTCGCATTCTCCCTGCCTCCACGCCGCGGCCACCTGCCC +
Preference number: 5 (lower is better)
Translates to: PVQHCSRPCPCRRGF*RVAFSLPPRRGHLP
Trigger: GGGCAGGTGGCCGCGGCGTGGAGGCAGGGAGAATGCGACTCTCCAAAACCCTCGTCGACATGGACATGGCCGACTACAGTGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000443598.6
CDS-3UTR CAA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGGCCCGAATGTCGCCGTaGATCCCGGAGACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKARMSP*IPETGE
Trigger: CTCCCCCGTCTCCGGGATCAACGGCGACATTCGGGC...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGCTGACACCCAGGCTGTaGGGCGCGTTGAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRLTPRL*GALRLV
Trigger: CACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAG...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AGTGCTGATCCGGTCCCGCTCATTCTGGACGGCTTCCTTCTTCATGCCAGCCCGCCCCAAGTGCCACAATaGGACCCAGCCTCACAGGGC +
Preference number: 5 (lower is better)
Translates to: SADPVPLILDGFLLHASPPQVPQ*DPASQG
Trigger: GCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGG...CGGGCTGGCATGAAGAAGGAAGCCGTCCAGAATGAGCGGGACCGGATCAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CAA 90 bp TGGCGACGGCTCCCGGCAGGAGCTTATAGGGCTCAGACCCTGAGCCACCTGGCGGAACACAGGGAGCCTTaGGAGAAGCTATTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: WRRLPAGAYRAQTLSHLAEHREP*EKLFSH
Trigger: GTGGCTGAATAGCTTCTCCAAAGGCTCCCTGTGTTC...CGCCAGGTGGCTCAGGGTCTGAGCCCTATAAGCTCCTGCCGGGAGCCGTCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS GCA 90 bp CCCCGCCCCTCCTGGGCTTGGCACGGACCTCCCAGCAGCATCTCCTaGAACAGGTTGTCAATCTTGGCCATGCCGAAGAGCTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: PRPSWAWHGPPSSIS*NRLSILAMPKSLMN
Trigger: GTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGTCCGTGCCAAGCCCAGGAGGGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443598.6
ENST00000609795.5
CDS GCA 90 bp CAGCCAGCAGGCCTCCCTGTGGAGAACTGTCCACCCCTCCAGATATaGTCCAGTGATGTCGGAGGGGATGCCTCAATCTGGCGAGACGCA +
Preference number: 5 (lower is better)
Translates to: QPAGLPVENCPPLQI*SSDVGGDASIWRDA
Trigger: TGCGTCTCGCCAGATTGAGGCATCCCCTCCGACATCACTGGAGCATATCTGGAGGGGTGGACAGTTCTCCACAGGGAGGCCTGCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS-3UTR CAA 90 bp GTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTAGGGGGCTGGGGTTGGGCGCGTTGAGGTaGGTGCCTTCTGATGGGGAC +
Preference number: 5 (lower is better)
Translates to: VFLCRDHVITRCSLRGLGLGALR*VPSDGD
Trigger: GTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAA...CCCCAGCCCCCTAAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp ACGCACTGCCGGCTAAATCTGCAGGAGTACATGTGGTTCTTCCGCACGCTCCTCGCCTGCAGGAGCGCATaGATGGAGGGCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: THCRLNLQEYMWFFRTLLACRSA*MEGRLL
Trigger: CAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGGC...GAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAGATTTAGCCGGCAGTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CAA 90 bp TCCAAGGCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGGTTTCCAAGGCCTCCTaGGCCTCTGGAGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SKASLASGEVVLEKTGWLVSKAS*ASGEVV
Trigger: CACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAAC...CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGCCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCCAGTCTCCGCTGGGATaGGGGGCTTGGCTGGGACTG +
Preference number: 5 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAQSPLG*GAWLGL
Trigger: CAGTCCCAGCCAAGCCCCCAATCCCAGCGGAGACTG...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCTGACACCCAGGCTGTaGGGCGCGTTGAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGLTPRL*GALRLV
Trigger: CACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGCCTGCAGGAGCGCATaGATGGAGGGCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKACRSA*MEGRLL
Trigger: CAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGGC...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGCCCGAATGTCGCCGTaGATCCCGGAGACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRARMSP*IPETGE
Trigger: CTCCCCCGTCTCCGGGATCAACGGCGACATTCGGGC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GAAAGCTGGGATGTACTTGGCCCACTCAACGAGAACCAGCAGCTGCTCCTTCATGCCCGAATGTCGCCGTaGATCCCGGAGACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: ESWDVLGPLNENQQLLLHARMSP*IPETGE
Trigger: CTCCCCCGTCTCCGGGATCAACGGCGACATTCGGGC...ATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CAA 90 bp CTGGCACGTGCTAGGTTCTCGGTGCCTGAACAAATAGACCATTGCCTTGTTCCCGCCCGAATGTCGCCGTaGATCCCGGAGACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LARARFSVPEQIDHCLVPARMSP*IPETGE
Trigger: CTCCCCCGTCTCCGGGATCAACGGCGACATTCGGGC...GGGAACAAGGCAATGGTCTATTTGTTCAGGCACCGAGAACCTAGCACGTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGAACACCATGGATCTCTaGGTGGCTCCGAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKNTMDL*VAPSSR
Trigger: CCTGCTGCTCGGAGCCACCAAGAGATCCATGGTGTT...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGGATCGCTCAGCCCCTaGGCATCTGGGTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRGSLSP*ASGSKK
Trigger: CTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATCC...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGACCCCAAGTGCCACAATaGGACCCAGCCTCACAGGGC +
Preference number: 5 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGPQVPQ*DPASQG
Trigger: GCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGG...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGTCTGGAGAGGTGGTGTaGGAGAAGACGGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKSGEVV*EKTGWL
Trigger: CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGA...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp TTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGGTCTTGGTGGGGAAATaGTGCCCACGCTTGTCCCCC +
Preference number: 5 (lower is better)
Translates to: FLLWDWSWHHVFLCRDHVVLVGK*CPRLSP
Trigger: GGGGGACAAGCGTGGGCACAATTTCCCCACCAAGAC...CACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS CCA 90 bp GCTTGTTTGCTATCTCTGGTGTGTTTTTGCCTTGCGCTCCTGGCGTaGTCCTCAGACAGGCCTAAAAGCCGTCCAGCCAGCAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: ACLLSLVCFCLALLA*SSDRPKSRPASRPP
Trigger: GGGAGGCCTGCTGGCTGGACGGCTTTTAGGCCTGTCTGAGGACCACGCCAGGAGCGCAAGGCAAAAACACACCAGAGATAGCAAACAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS-3UTR CAA 90 bp ACGCACTGCCGGCTAAATCTGCAGGAGTACATGTGGTTCTTCCGCACGCTCCTCTTGGGCGCGTTGAGGTaGGTGCCTTCTGATGGGGAC +
Preference number: 5 (lower is better)
Translates to: THCRLNLQEYMWFFRTLLLGALR*VPSDGD
Trigger: GTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAA...GAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAGATTTAGCCGGCAGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CAA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGATGGCAGAGAGGGGCTaGACGATTGTGGCGACGGCT +
Preference number: 5 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRMAERG*TIVATA
Trigger: AGCCGTCGCCACAATCGTCAAGCCCCTCTCTGCCAT...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCCCCCAAGTGCCACAATaGGACCCAGCCTCACAGGGC +
Preference number: 5 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSPQVPQ*DPASQG
Trigger: GCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGG...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS CCA 90 bp CAGCAGCTTGTTTGCTATCTCTGGTGTGTTTTTGCCTTGCGCTCCTaGCGTGGTCCTCAGACAGGCCTAAAAGCCGTCCAGCCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: QQLVCYLWCVFALRS*RGPQTGLKAVQPAG
Trigger: GCCTGCTGGCTGGACGGCTTTTAGGCCTGTCTGAGGACCACGCCAGGAGCGCAAGGCAAAAACACACCAGAGATAGCAAACAAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS-3UTR CAA 90 bp GCCTCCTTGGCCTCTGGAGAGGTGGTGTTGGAGAAGACGGGATGGCTGAGCAAGATGTCGACGAGGGTTTaGGAGAGTCGCATTCTCCCT +
Preference number: 5 (lower is better)
Translates to: ASLASGEVVLEKTGWLSKMSTRV*ESRILP
Trigger: AGGGAGAATGCGACTCTCCAAAACCCTCGTCGACAT...CTTGCTCAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGAGGCCAAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGGATGGGGACGTGTCATaGCCCATCGTCAACACCTGC +
Preference number: 5 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGDGDVS*PIVNTC
Trigger: GCAGGTGTTGACGATGGGCAATGACACGTCCCCATC...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000415691.2
CDS-3UTR CAA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGRLLGA*RLVPSD
Trigger: ATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCT...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACATGGTTCCTCTTGTCTTaGTCCACCACGCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTWFLLS*STTHCR
Trigger: CCGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCA...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGTGGTTCCTCTTGTCTTaGTCCACCACGCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGWFLLS*STTHCR
Trigger: CCGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCA...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCCGGCACTGGTTCCTCTaGTCTTTGTCCACCACGCAC +
Preference number: 5 (lower is better)
Translates to: HPSHSCSGTGPGITSSFARHWFL*SLSTTH
Trigger: GTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCG...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGGATCGCTCAGCCCCTaGGCATCTGGGTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGGSLSP*ASGSKK
Trigger: CTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATCC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AGTGTTGAGCAGGGGGCAGGAGTCGGTCCAACAGTTTCCCTCCTACCTAATCACTGGGAACGCAGCCGCTaGATCTTCCCTGGATCGCTC +
Preference number: 5 (lower is better)
Translates to: SVEQGAGVGPTVSLLPNHWERSR*IFPGSL
Trigger: GAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCCA...GTGATTAGGTAGGAGGGAAACTGTTGGACCGACTCCTGCCCCCTGCTCAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTGGGAACGCAGCCGCTaGATCTTCCCTGGATCGCTC +
Preference number: 5 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSWERSR*IFPGSL
Trigger: GAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCCA...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCTCTGGAGAGGTGGTGTaGGAGAAGACGGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: HPSHSCSGTGPGITSSFASGEVV*EKTGWL
Trigger: CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGA...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCGTTTCCAAGGCCTCCTaGGCCTCTGGAGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPVSKAS*ASGEVV
Trigger: CACCACCTCTCCAGAGGCCAAGGAGGCCTTGGAAAC...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CATCCTTCCCATTCCTGCTCTGGGACTGGTCCTGGCATCACGTCTTCCTTTGCCGAGGGTTTACCCATCTaGTCCTCTCCAGCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: HPSHSCSGTGPGITSSFAEGLPI*SSPAPS
Trigger: GCTTGGGGCTGGAGAGGACAAGATGGGTAAACCCTC...GGCAAAGGAAGACGTGATGCCAGGACCAGTCCCAGAGCAGGAATGGGAAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGGAGGGTTTACCCATCTaGTCCTCTCCAGCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: PAPCILLEADQDLSLVFQEGLPI*SSPAPS
Trigger: GCTTGGGGCTGGAGAGGACAAGATGGGTAAACCCTC...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGGGAGTAAGGAAGAGCTaGAGACAGGCCCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRGVRKS*RQALGA
Trigger: AGCTCCCAGGGCCTGTCTCAAGCTCTTCCTTACTCC...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGAGGATGACAGACCCTaGGACCCTCTTGCCATTCTT +
Preference number: 5 (lower is better)
Translates to: AEGGARCPKCHNWTQPHREDDRP*DPLAIL
Trigger: AAGAATGGCAAGAGGGTCCAAGGGTCTGTCATCCTC...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGCCCAGACCAGAACTTTaGTCCCCTCCCTTAAGGAAG +
Preference number: 5 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRPRPEL*SPPLRK
Trigger: CTTCCTTAAGGGAGGGGACAAAAGTTCTGGTCTGGG...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS CCA 90 bp GGCCATTGCCCATCGTCAACACCTGCACATTCTCAAATTCCAGGGTaGTGTAGGCTGGGTCCAGTGCAGCACTGTAGTCGGCCATGTCCA +
Preference number: 5 (lower is better)
Translates to: GHCPSSTPAHSQIPG*CRLGPVQHCSRPCP
Trigger: TGGACATGGCCGACTACAGTGCTGCACTGGACCCAGCCTACACCACCCTGGAATTTGAGAATGTGCAGGTGTTGACGATGGGCAATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS-3UTR CAA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCTTGGGCGCGTTGAGGTaGGTGCCTTCTGATGGGGAC +
Preference number: 5 (lower is better)
Translates to: RATVAHGTPWDILISTFLLGALR*VPSDGD
Trigger: GTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAA...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTGGTTCCTCTTGTCTTaGTCCACCACGCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSWFLLS*STTHCR
Trigger: CCGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCA...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCCGGCACTGGTTCCTCTaGTCTTTGTCCACCACGCAC +
Preference number: 5 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSRHWFL*SLSTTH
Trigger: GTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCG...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp ATACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGGCCTGCAGGAGCGCATaGATGGAGGGCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IHRYPRIHTYSHTHSLPEACRSA*MEGRLL
Trigger: CAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGGC...CTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAACACCATGGATCTCTaGGTGGCTCCGAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPNTMDL*VAPSSR
Trigger: CCTGCTGCTCGGAGCCACCAAGAGATCCATGGTGTT...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCATGGGAACGCAGCCGCTaGATCTTCCCTGGATCGCTC +
Preference number: 5 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPWERSR*IFPGSL
Trigger: GAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCCA...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp GTAGAAGGGAGCCGGAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCATCTCCTGCAACAGGTaGTCAATCTTGGCCATGCCG +
Preference number: 5 (lower is better)
Translates to: VEGSRKPLNLITVRTQGAISCNR*SILAMP
Trigger: CGGCATGGCCAAGATTGACAACCTGTTGCAGGAGAT...GGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCGGCTCCCTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGATGGCAGAGAGGGGCTaGACGATTGTGGCGACGGCT +
Preference number: 5 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRMAERG*TIVATA
Trigger: AGCCGTCGCCACAATCGTCAAGCCCCTCTCTGCCAT...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACACCAAGCCCCAGCGGCTaGCTAGATAACTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTPSPSG*LDNFLL
Trigger: AAGCAGGAAGTTATCTAGCAAGCCGCTGGGGCTTGG...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGATCTGGAGAGGTGGTGTaGGAGAAGACGGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGSGEVV*EKTGWL
Trigger: CAGCCATCCCGTCTTCTCCAACACCACCTCTCCAGA...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GCAGAAGGAGGAGCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGTTTGTTTTCTCGGGTaGAAGGCCTTCAGGGATCCT +
Preference number: 5 (lower is better)
Translates to: AEGGARCPKCHNWTQPHRVCFLG*KAFRDP
Trigger: AGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC...CCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGCTCCTCCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGAGTCGCCAACCTGGGTTaGTTTTCTCGGGTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGVANLG*FSRVEG
Trigger: GCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGAC...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGGTCGCCAACCTGGGTTaGTTTTCTCGGGTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: PAPCILLEADQDLSLVFQVANLG*FSRVEG
Trigger: GCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGAC...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp GTTCCCAGAAGAACGAGTCTGGTTTCTGAGGCTGTAGAAGGGAGCCGGAAGCCCCACTCCAAGTTCCTGTaGCAGTCGCCAACCTGGGTT +
Preference number: 5 (lower is better)
Translates to: VPRRTSLVSEAVEGSRKPHSKFL*QSPTWV
Trigger: AACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTG...GGGCTTCCGGCTCCCTTCTACAGCCTCAGAAACCAGACTCGTTCTTCTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGCGGAAGCCCCTCAACTaGATCACGGTGAGAACACAG +
Preference number: 5 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRRKPLN*ITVRTQ
Trigger: CTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCG...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp GAAGCCCCTCAACTTGATCACGGTGAGAACACAGGGAGCCTTTGGAGAAGCTATCATGAAGGGCCACTGTaGCCCACGGCACTCCATGGG +
Preference number: 5 (lower is better)
Translates to: EAPQLDHGENTGSLWRSYHEGPL*PTALHG
Trigger: CCCATGGAGTGCCGTGGGCAACAGTGGCCCTTCATG...ATAGCTTCTCCAAAGGCTCCCTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS TCA 90 bp ACAAAATCATCACGTCACTGTGCCAAGCGCCAAGCAGAGCCACTGTaGGGCAGTGAGGACTGGAAGGGCCATTGCCCATCGTCAACACCT +
Preference number: 5 (lower is better)
Translates to: TKSSRHCAKRQAEPL*GSEDWKGHCPSSTP
Trigger: AGGTGTTGACGATGGGCAATGGCCCTTCCAGTCCTCACTGCCTCACAGTGGCTCTGCTTGGCGCTTGGCACAGTGACGTGATGATTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS GCA 90 bp CCACCTAGTGCAGCAGCAGCTTGTTTGCTATCTCTGGTGTGTTTTTaGCTTGCGCTCCTGGCGTGGTCCTCAGACAGGCCTAAAAGCCGT +
Preference number: 5 (lower is better)
Translates to: PPSAAAACLLSLVCF*LALLAWSSDRPKSR
Trigger: ACGGCTTTTAGGCCTGTCTGAGGACCACGCCAGGAGCGCAAGGCAAAAACACACCAGAGATAGCAAACAAGCTGCTGCTGCACTAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS CCA 90 bp CACACAACACTCCACCTAGTGCAGCAGCAGCTTGTTTGCTATCTCTaGTGTGTTTTTGCCTTGCGCTCCTGGCGTGGTCCTCAGACAGGC +
Preference number: 5 (lower is better)
Translates to: HTTLHLVQQQLVCYL*CVFALRSWRGPQTG
Trigger: GCCTGTCTGAGGACCACGCCAGGAGCGCAAGGCAAAAACACACCAGAGATAGCAAACAAGCTGCTGCTGCACTAGGTGGAGTGTTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS-3UTR CAA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGATGTCGACGAGGGTTTaGGAGAGTCGCATTCTCCCT +
Preference number: 5 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRMSTRV*ESRILP
Trigger: AGGGAGAATGCGACTCTCCAAAACCCTCGTCGACAT...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTCTGACACCCAGGCTGTaGGGCGCGTTGAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVLTPRL*GALRLV
Trigger: CACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAG...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp ACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAGACTGACACCCAGGCTGTaGGGCGCGTTGAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: TASPRAKILFFAELPALRLTPRL*GALRLV
Trigger: CACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAG...TCTAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp CACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTGGTTCCTCTTGTCTTaGTCCACCACGCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: HTQPPRGQRSCSLLNCQHWFLLS*STTHCR
Trigger: CCGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCA...GTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACGGCACTGGTTCCTCTaGTCTTTGTCCACCACGCAC +
Preference number: 5 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPRHWFL*SLSTTH
Trigger: GTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAAAAGCTGGGATGTACTaGGCCCACTCAACGAGAACC +
Preference number: 5 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTKAGMY*AHSTRT
Trigger: GGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTT...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAAGGAGCAGCACGTCCTaGAACACCATGGATCTCTTG +
Preference number: 5 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTRSSTS*NTMDLL
Trigger: CAAGAGATCCATGGTGTTCAAGGACGTGCTGCTCCT...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CTGGCACGTGCTAGGTTCTCGGTGCCTGAACAAATAGACCATTGCCTTGTTCCCGGATCGCTCAGCCCCTaGGCATCTGGGTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: LARARFSVPEQIDHCLVPGSLSP*ASGSKK
Trigger: CTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATCC...GGGAACAAGGCAATGGTCTATTTGTTCAGGCACCGAGAACCTAGCACGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCGCCATGCCGAAGAGCTaGATGAACTGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSAMPKS*MNWICS
Trigger: CGAGCAGATCCAGTTCATCAAGCTCTTCGGCATGGC...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GACCACAATGCCCAGAAATGGTTCCAGCCTCCCTGCCTTACCGCAGACCAGGCTAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: DHNAQKWFQPPCLTADQANRLSI*AMPKSL
Trigger: CAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTT...AGCCTGGTCTGCGGTAAGGCAGGGAGGCTGGAACCATTTCTGGGCATTGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACATGGCAGAGAGGGGCTaGACGATTGTGGCGACGGCT +
Preference number: 5 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYMAERG*TIVATA
Trigger: AGCCGTCGCCACAATCGTCAAGCCCCTCTCTGCCAT...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CCAGCTCCCTGCATACTCCTTGAAGCTGATCAGGACCTCAGCCTGGTGTTCCAGCCCCAAGTCAAAGTCTaGTTATCCAGAGCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: PAPCILLEADQDLSLVFQPQVKV*LSRAGR
Trigger: ACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGG...CTGGAACACCAGGCTGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCGAGGATGAGGTTGGGTaGGAGGAGAAAGGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPEDEVG*EEKGVF
Trigger: GAAGACGCCTTTCTCCTCCAACCCAACCTCATCCTC...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGATGAGGTTGGGTaGGAGGAGAAAGGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKEDEVG*EEKGVF
Trigger: GAAGACGCCTTTCTCCTCCAACCCAACCTCATCCTC...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GTGCATCGCTGGGGGACCCTCCCAGCAGCATCTCCTGCAACAGGTTGTCAATCTGTTTGTTTTCTCGGGTaGAAGGCCTTCAGGGATCCT +
Preference number: 5 (lower is better)
Translates to: VHRWGTLPAASPATGCQSVCFLG*KAFRDP
Trigger: AGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC...AGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGGTCCCCCAGCGATGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CAA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGCACTCCAAGTTCCTGTaGCAGTCGCCAACCTGGGTT +
Preference number: 5 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKHSKFL*QSPTWV
Trigger: AACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTG...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACACTCCCTGCATACTCCTaGAAGCTGATCAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTLPAYS*KLIRTS
Trigger: TGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAG...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAGGAGTAAGGAAGAGCTaGAGACAGGCCCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPGVRKS*RQALGA
Trigger: AGCTCCCAGGGCCTGTCTCAAGCTCTTCCTTACTCC...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGAACACAGGGAGCCTTaGGAGAAGCTATTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTEHREP*EKLFSH
Trigger: GTGGCTGAATAGCTTCTCCAAAGGCTCCCTGTGTTC...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp GTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCCGGAAGCCCCTCAACTaGATCACGGTGAGAACACAG +
Preference number: 5 (lower is better)
Translates to: VAVANLGLFSRVEGLQGSRKPLN*ITVRTQ
Trigger: CTGTGTTCTCACCGTGATCAAGTTGAGGGGCTTCCG...GGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACATTCCTCCCTGACACATaGCCCCAATACTTCTCCACG +
Preference number: 5 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTFLPDT*PQYFST
Trigger: CGTGGAGAAGTATTGGGGCAATGTGTCAGGGAGGAA...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp CCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACATGGGGTCTCCTTATATaGCTCTGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: PSATIGPSLTGLCLDTMTWGLLI*LWLVSN
Trigger: GTTCGAGACCAGCCAGAGCAATATAAGGAGACCCCA...TGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCACCCATGGTCCAGCCATaGCCGAATGCTGTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASPMVQP*PNAVVC
Trigger: GCACACCACAGCATTCGGCAATGGCTGGACCATGGG...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS CCA 90 bp TGTCATTGCCCATCGTCAACACCTGCACATTCTCAAATTCCAGGGTaGTGTAGGCTGGGTCCAGTGCAGCACTGTAGTCGGCCATGTCCA +
Preference number: 5 (lower is better)
Translates to: CHCPSSTPAHSQIPG*CRLGPVQHCSRPCP
Trigger: TGGACATGGCCGACTACAGTGCTGCACTGGACCCAGCCTACACCACCCTGGAATTTGAGAATGTGCAGGTGTTGACGATGGGCAATGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000316099.9
ENST00000415691.2
ENST00000443598.6
ENST00000619550.5
ENST00000681977.1
ENST00000683148.1
ENST00000683657.1
ENST00000684046.1
ENST00000684136.1
CDS CCA 90 bp GTTAGGGTCTTAGCACAAGAGTCACCACTTCAGAGAGGTCTCCTGTaGCCTCCCCTATCTCCCAGCAGCATCTCCTGCAACAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: VRVLAQESPLQRGLL*PPLSPSSISCNRLS
Trigger: TGACAACCTGTTGCAGGAGATGCTGCTGGGAGATAGGGGAGGCCACAGGAGACCTCTCTGAAGTGGTGACTCTTGTGCTAAGACCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619550.5
CDS CCA 90 bp TCCACCACGCACTGCCGGCTAAATCTGGGGAGGGCTTTGGATGGTTaGATGGAGAAGACACAACTTCCTCCTCTTAGGACAGAACTAGGG +
Preference number: 5 (lower is better)
Translates to: STTHCRLNLGRALDG*MEKTQLPPLRTELG
Trigger: CCCTAGTTCTGTCCTAAGAGGAGGAAGTTGTGTCTTCTCCATCCAACCATCCAAAGCCCTCCCCAGATTTAGCCGGCAGTGCGTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CCA 90 bp AGCCTCGTGTTGAGCACTACAGAGGATACAGGCTGGGCCAGGCTGTaGAGGGAACTAGAACTAGAAATCTCACCCTCTGGTAAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: SLVLSTTEDTGWARL*RELELEISPSGKCG
Trigger: CCCACACTTACCAGAGGGTGAGATTTCTAGTTCTAGTTCCCTCCACAGCCTGGCCCAGCCTGTATCCTCTGTAGTGCTCAACACGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683148.1
CDS-3UTR CAA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTATGTCGACGAGGGTTTaGGAGAGTCGCATTCTCCCT +
Preference number: 5 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLMSTRV*ESRILP
Trigger: AGGGAGAATGCGACTCTCCAAAACCCTCGTCGACAT...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp ATACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGTTGGGCGCGTTGAGGTaGGTGCCTTCTGATGGGGAC +
Preference number: 5 (lower is better)
Translates to: IHRYPRIHTYSHTHSLPELGALR*VPSDGD
Trigger: GTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAA...CTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: HTASPRAKILFFAELPALRLLGA*RLVPSD
Trigger: ATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCT...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTCGGCACTGGTTCCTCTaGTCTTTGTCCACCACGCAC +
Preference number: 5 (lower is better)
Translates to: HTASPRAKILFFAELPALRHWFL*SLSTTH
Trigger: GTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCG...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp ACTCCATGGGACATTCTTATCTCAACCTTTCTCCCAAGACAGAGGTCTGAGCAAGCCTGCAGGAGCGCATaGATGGAGGGCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TPWDILISTFLPRQRSEQACRSA*MEGRLL
Trigger: CAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGGC...TTGCTCAGACCTCTGTCTTGGGAGAAAGGTTGAGATAAGAATGTCCCATGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCAAAAGCTGGGATGTACTaGGCCCACTCAACGAGAACC +
Preference number: 5 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPKAGMY*AHSTRT
Trigger: GGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTT...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp CACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAACACCATGGATCTCTaGGTGGCTCCGAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HTASPRAKILFFAELPALNTMDL*VAPSSR
Trigger: CCTGCTGCTCGGAGCCACCAAGAGATCCATGGTGTT...AAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp TCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGAAGGAGCAGCACGTCCTaGAACACCATGGATCTCTTG +
Preference number: 5 (lower is better)
Translates to: SPSQSLVIQSRASRVAVGRSSTS*NTMDLL
Trigger: CAAGAGATCCATGGTGTTCAAGGACGTGCTGCTCCT...TCCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCAGCCATGCCGAAGAGCTaGATGAACTGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPAMPKS*MNWICS
Trigger: CGAGCAGATCCAGTTCATCAAGCTCTTCGGCATGGC...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGNRLSI*AMPKSL
Trigger: CAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTT...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGGAGGATTGGCAACGATGACGTaGGTTCCCATATGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: RPSGILTQVPTQVPEEGGLATMT*VPICSC
Trigger: GCAGGAACATATGGGAACCAACGTCATCGTTGCCAA...TCCTCCTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AGGCCCTGGGAGCTTATTCCTCCTGGATGTCACTCTGATGTGAGGGTTTACCCACCAAGCCCCAGCGGCTaGCTAGATAACTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RPWELIPPGCHSDVRVYPPSPSG*LDNFLL
Trigger: AAGCAGGAAGTTATCTAGCAAGCCGCTGGGGCTTGG...TGGGTAAACCCTCACATCAGAGTGACATCCAGGAGGAATAAGCTCCCAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp AAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACACCATGACAGGGTTTGTTTTCTCGGGTaGAAGGCCTTCAGGGATCCT +
Preference number: 5 (lower is better)
Translates to: KCHNWTQPHRALSGHHDRVCFLG*KAFRDP
Trigger: AGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC...CCTGTCATGGTGTCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGTCGCCAACCTGGGTTaGTTTTCTCGGGTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRVANLG*FSRVEG
Trigger: GCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGAC...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCGGCTCAGGCTGTTCTTaGGAATGTCCCATCTCACCT +
Preference number: 5 (lower is better)
Translates to: GLFSRVEGLQGSSPKYPPGSGCS*ECPISP
Trigger: AGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCC...GGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGCTCCCTGCATACTCCTaGAAGCTGATCAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKLPAYS*KLIRTS
Trigger: TGAGGTCCTGATCAGCTTCAAGGAGTATGCAGGGAG...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCACCATTCTTCCAGATCTaGCCATTGCACTCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPPFFQI*PLHSPL
Trigger: GAGGGGAGAGTGCAATGGCAAGATCTGGAAGAATGG...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTGACCCTTGGACCCTCTaGCCATTCTTCCAGATCTTG +
Preference number: 5 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLDPWTL*PFFQIL
Trigger: CAAGATCTGGAAGAATGGCAAGAGGGTCCAAGGGTC...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS CCA 90 bp AATCATTGCCCATCGTCAACACCTGCACATTCTCAAATTCCAGGGTaGTGTAGGCTGGGTCCAGTGCAGCACTGTAGTCGGCCATGTCCA +
Preference number: 5 (lower is better)
Translates to: NHCPSSTPAHSQIPG*CRLGPVQHCSRPCP
Trigger: TGGACATGGCCGACTACAGTGCTGCACTGGACCCAGCCTACACCACCCTGGAATTTGAGAATGTGCAGGTGTTGACGATGGGCAATGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS CCA 90 bp CTCATCTCTTCATCCCGGGAGTTCTCTCTTGAACCCACCAGGAGCTaGAAAGGTGCTATGAACTCTCTAAGAGCCCAGTCCTGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LISSSREFSLEPTRS*KGAMNSLRAQSCPA
Trigger: AGCAGGACAGGACTGGGCTCTTAGAGAGTTCATAGCACCTTTCCAGCTCCTGGTGGGTTCAAGAGAGAACTCCCGGGATGAAGAGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS-3UTR CAA 90 bp CTGGCACGTGCTAGGTTCTCGGTGCCTGAACAAATAGACCATTGCCTTGTTCCCAGGAGCAGCACGTCCTaGAACACCATGGATCTCTTG +
Preference number: 5 (lower is better)
Translates to: LARARFSVPEQIDHCLVPRSSTS*NTMDLL
Trigger: CAAGAGATCCATGGTGTTCAAGGACGTGCTGCTCCT...GGGAACAAGGCAATGGTCTATTTGTTCAGGCACCGAGAACCTAGCACGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACGCCATGCCGAAGAGCTaGATGAACTGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYAMPKS*MNWICS
Trigger: CGAGCAGATCCAGTTCATCAAGCTCTTCGGCATGGC...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp CTGGCACGTGCTAGGTTCTCGGTGCCTGAACAAATAGACCATTGCCTTGTTCCCATCTCCTGCAACAGGTaGTCAATCTTGGCCATGCCG +
Preference number: 5 (lower is better)
Translates to: LARARFSVPEQIDHCLVPISCNR*SILAMP
Trigger: CGGCATGGCCAAGATTGACAACCTGTTGCAGGAGAT...GGGAACAAGGCAATGGTCTATTTGTTCAGGCACCGAGAACCTAGCACGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGTTGGCAACGATGACGTaGGTTCCCATATGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKLATMT*VPICSC
Trigger: GCAGGAACATATGGGAACCAACGTCATCGTTGCCAA...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCAAGCCCCAGCGGCTaGCTAGATAACTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYPSPSG*LDNFLL
Trigger: AAGCAGGAAGTTATCTAGCAAGCCGCTGGGGCTTGG...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCACCCCAAGTCAAAGTCTaGTTATCCAGAGCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: VCFLGLKAFRDPHPSTHPPQVKV*LSRAGR
Trigger: ACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGG...TGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp AAGGCAGTAGAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAGAGGATGAGGTTGGGTaGGAGGAGAAAGGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: KAVEVSPSQSLVIQSRASEDEVG*EEKGVF
Trigger: GAAGACGCCTTTCTCCTCCAACCCAACCTCATCCTC...TGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTCTACTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GCAAGGTGCCCCAAGTGCCACAATTGGACCCAGCCTCACAGGGCTCTGTCTGGACCAGCAACCCTCTGTTaGTCCATCAGATTTTATGTT +
Preference number: 5 (lower is better)
Translates to: ARCPKCHNWTQPHRALSGPATLC*SIRFYV
Trigger: AACATAAAATCTGATGGACAAACAGAGGGTTGCTGG...TCCAGACAGAGCCCTGTGAGGCTGGGTCCAATTGTGGCACTTGGGGCACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp TACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGGGACAGGTTAAGCAACTaGCCCAAAGCGGCACAGTGG +
Preference number: 5 (lower is better)
Translates to: YTDIHASIHTHTHTASPRDRLSN*PKAAQW
Trigger: CCACTGTGCCGCTTTGGGCAAGTTGCTTAACCTGTC...CCTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS GCA 90 bp AACCCTGGCTCTGCCAGTGATTCAAGCTGGTTGACCTTGGGCAAATaGCTAGCCCTCCAAGCCACAGCTTCCTCCTCTATAAAATGGGAA +
Preference number: 5 (lower is better)
Translates to: NPGSASDSSWLTLGK*LALQATASSSIKWE
Trigger: TTCCCATTTTATAGAGGAGGAAGCTGTGGCTTGGAGGGCTAGGCATTTGCCCAAGGTCAACCAGCTTGAATCACTGGCAGAGCCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CCA 90 bp GCTGGTAGCAGGAAGCCTGGCAAGACCTTAATAAATGTTGTGCTCTaGTCTTCTCCTCCTTTGTCCAGGATGGGTCTGGGGTCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: AGSRKPGKTLINVVL*SSPPLSRMGLGSCS
Trigger: GGAACAAGACCCCAGACCCATCCTGGACAAAGGAGGAGAAGACCAGAGCACAACATTTATTAAGGTCTTGCCAGGCTTCCTGCTACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000681977.1
ENST00000682169.1
ENST00000684046.1
ENST00000684136.1
ENST00000684476.1
CDS CCA 90 bp ACACAGGTTGGAAGGATCTATGCCGGATTTGAGCCCAGATCTTTCTaGTTCCAGAGCTGGAGGTGGTCTTGTCTTTGGGACTCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: TQVGRIYAGFEPRSF*FQSWRWSCLWDSQF
Trigger: GAACTGGGAGTCCCAAAGACAAGACCACCTCCAGCTCTGGAACCAGAAAGATCTGGGCTCAAATCCGGCATAGATCCTTCCAACCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS-3UTR CAA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDRLLGA*RLVPSD
Trigger: ATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCT...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp CTCACACACACACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCAAAGCTGGGATGTACTaGGCCCACTCAACGAGAACC +
Preference number: 5 (lower is better)
Translates to: LTHTQPPRGQRSCSLLNCKAGMY*AHSTRT
Trigger: GGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTT...GCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGTGTGTGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACAGGAGCAGCACGTCCTaGAACACCATGGATCTCTTG +
Preference number: 5 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYRSSTS*NTMDLL
Trigger: CAAGAGATCCATGGTGTTCAAGGACGTGCTGCTCCT...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GGGAGCCTTTGGAGAAGCTATTCAGCCACTGTAGTTAAGAGCTCCTGTTCTGATGGATCGCTCAGCCCCTaGGCATCTGGGTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GSLWRSYSATVVKSSCSDGSLSP*ASGSKK
Trigger: CTTCTTTGACCCAGATGCCAAGGGGCTGAGCGATCC...ATCAGAACAGGAGCTCTTAACTACAGTGGCTGAATAGCTTCTCCAAAGGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp ATACACAGATATCCACGCATCCATACATACTCACACACACACAGCCTCCCCGAGGCCATGCCGAAGAGCTaGATGAACTGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: IHRYPRIHTYSHTHSLPEAMPKS*MNWICS
Trigger: CGAGCAGATCCAGTTCATCAAGCTCTTCGGCATGGC...CTCGGGGAGGCTGTGTGTGTGTGAGTATGTATGGATGCGTGGATATCTGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp CTGGCACGTGCTAGGTTCTCGGTGCCTGAACAAATAGACCATTGCCTTGTTCCCAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LARARFSVPEQIDHCLVPNRLSI*AMPKSL
Trigger: CAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTT...GGGAACAAGGCAATGGTCTATTTGTTCAGGCACCGAGAACCTAGCACGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp AGGGCCACTGTTGCCCACGGCACTCCATGGGACATTCTTATCTCAACCTTTCTCTTGGCAACGATGACGTaGGTTCCCATATGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: RATVAHGTPWDILISTFLLATMT*VPICSC
Trigger: GCAGGAACATATGGGAACCAACGTCATCGTTGCCAA...GAGAAAGGTTGAGATAAGAATGTCCCATGGAGTGCCGTGGGCAACAGTGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp AGTCAGTGCTTACAACATGTTCCCAGAATGACTGGGGGAATCGTTTCCAAGGCCCACTCCAAGTTCCTGTaGCAGTCGCCAACCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SQCLQHVPRMTGGIVSKAHSKFL*QSPTWV
Trigger: AACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTG...GGCCTTGGAAACGATTCCCCCAGTCATTCTGGGAACATGTTGTAAGCACTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp TCCTGGCATCACGTCTTCCTTTGCCGTGACCACGTGATCACCAGGTGCTCTCTTCATAACACATCCCTTTaGTTCACACTGGTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SWHHVFLCRDHVITRCSLHNTSL*FTLVSG
Trigger: GCCACTGACCAGTGTGAACAAAAGGGATGTGTTATG...AAGAGAGCACCTGGTGATCACGTGGTCACGGCAAAGGAAGACGTGATGCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp TGGAGGAACACAGTGGGAATGACCACAATGCCCAGAAATGGTTCCAGCCTCCCTTTCCAGATCTTGCCATaGCACTCTCCCCTCATCACT +
Preference number: 5 (lower is better)
Translates to: WRNTVGMTTMPRNGSSLPFQILP*HSPLIT
Trigger: AGTGATGAGGGGAGAGTGCAATGGCAAGATCTGGAA...AGGGAGGCTGGAACCATTTCTGGGCATTGTGGTCATTCCCACTGTGTTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp GCCTTGGCTCAGGCTGTTCTTTGGAATGTCCCATCTCACCTGCTCTACCAGCCACTGGCAAACATGGAGTaGGGAAGAGAAGCTAACAGT +
Preference number: 5 (lower is better)
Translates to: ALAQAVLWNVPSHLLYQPLANME*GREANS
Trigger: ACTGTTAGCTTCTCTTCCCAACTCCATGTTTGCCAG...TGGCTGGTAGAGCAGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS GCA 90 bp CCAATCTCCATCTTCACCTCCTACACGTCCTCCATCTCACAACCTTaGCCTTCTTTCTCAAACACAACACTCTCTCCTATCCGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PISIFTSYTSSISQP*PSFSNTTLSPIRSP
Trigger: AGGGCTGCGGATAGGAGAGAGTGTTGTGTTTGAGAAAGAAGGGCAAGGTTGTGAGATGGAGGACGTGTAGGAGGTGAAGATGGAGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619550.5
CDS-3UTR CAA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTAAAGCTGGGATGTACTaGGCCCACTCAACGAGAACC +
Preference number: 5 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVKAGMY*AHSTRT
Trigger: GGTTCTCGTTGAGTGGGCCAAGTACATCCCAGCTTT...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGTGGGAACGCAGCCGCTaGATCTTCCCTGGATCGCTC +
Preference number: 5 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLWERSR*IFPGSL
Trigger: GAGCGATCCAGGGAAGATCAAGCGGCTGCGTTCCCA...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp AACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGGATCCTCACCCAAGTACAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: NLGLFSRVEGLQGSSPKYNRLSI*AMPKSL
Trigger: CAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTT...GTACTTGGGTGAGGATCCCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp ATGCTTTTCCTCTCCACTCCAAGTTCCTGTTGCAGTCGCCAACCTGGGTTTGTTATCTCCTGCAACAGGTaGTCAATCTTGGCCATGCCG +
Preference number: 5 (lower is better)
Translates to: MLFLSTPSSCCSRQPGFVISCNR*SILAMP
Trigger: CGGCATGGCCAAGATTGACAACCTGTTGCAGGAGAT...AACAAACCCAGGTTGGCGACTGCAACAGGAACTTGGAGTGGAGAGGAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
CDS-3UTR CAA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCGGCTCAGGCTGTTCTTaGGAATGTCCCATCTCACCT +
Preference number: 5 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLGSGCS*ECPISP
Trigger: AGGTGAGATGGGACATTCCAAAGAACAGCCTGAGCC...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp CTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAGTGGGCGATATACTAAGTACTaGGAATCAAGAGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: LPKSKSCYPEQGVKGGSGRYTKY*ESRDQG
Trigger: ACCCTGGTCTCTTGATTCCAAGTACTTAGTATATCG...CCCACTGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp TTCCTGTTGCAGTCGCCAACCTGGGTTTGTTTTCTCGGGTTGAAGGCCTTCAGGTGTAATAGTTTAGCCTaGGAGAGAAGCCCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: FLLQSPTWVCFLGLKAFRCNSLA*ERSPVA
Trigger: AGCCACTGGGCTTCTCTCCAAGGCTAAACTATTACA...CCTGAAGGCCTTCAACCCGAGAAAACAAACCCAGGTTGGCGACTGCAACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp GTTGAAGGCCTTCAGGGATCCTCACCCAAGTACCCACCCAAGTCCCTGAAGAAGTGTGATCTCATTCCATaGAATCCTGACATCTGCCCT +
Preference number: 5 (lower is better)
Translates to: VEGLQGSSPKYPPKSLKKCDLIP*NPDICP
Trigger: AGGGCAGATGTCAGGATTCAATGGAATGAGATCACA...CTTCTTCAGGGACTTGGGTGGGTACTTGGGTGAGGATCCCTGAAGGCCTTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp TACCCTTTCTCAAAGGCCTGGTGGATGGTCTGCCTCTTTCTGATGCTTTTCCTCGCGGCAACAAAATCATaGCCCATCGTCAACACCTGC +
Preference number: 5 (lower is better)
Translates to: YPFSKAWWMVCLFLMLFLAATKS*PIVNTC
Trigger: GCAGGTGTTGACGATGGGCAATGATTTTGTTGCCGC...GAGGAAAAGCATCAGAAAGAGGCAGACCATCCACCAGGCCTTTGAGAAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS CCA 90 bp GGCAGAGTTAATCCCTTAATACTGGTCACAATGAGATTTCAGGGATaGTGGGAGGCGGTCTCCATGGAAACTGCAGACCGTAAGAACTCT +
Preference number: 5 (lower is better)
Translates to: GRVNPLILVTMRFQG*WEAVSMETADRKNS
Trigger: AGAGTTCTTACGGTCTGCAGTTTCCATGGAGACCGCCTCCCACCATCCCTGAAATCTCATTGTGACCAGTATTAAGGGATTAACTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609262.5
CDS CCA 90 bp AGAGTTAATCCCTTAATACTGGTCACAATGAGATTTCAGGGATGGTaGGAGGCGGTCTCCATGGAAACTGCAGACCGTAAGAACTCTCCA +
Preference number: 5 (lower is better)
Translates to: RVNPLILVTMRFQGW*EAVSMETADRKNSP
Trigger: TGGAGAGTTCTTACGGTCTGCAGTTTCCATGGAGACCGCCTCCCACCATCCCTGAAATCTCATTGTGACCAGTATTAAGGGATTAACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609262.5
CDS-3UTR CAA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGATGTCGACGAGGGTTTaGGAGAGTCGCATTCTCCCT +
Preference number: 5 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLMSTRV*ESRILP
Trigger: AGGGAGAATGCGACTCTCCAAAACCCTCGTCGACAT...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp GAGGTCTCCCCAAGTCAAAGTCTTGTTATCCAGAGCAGGGCGTCAAGGGTGGCAATTCTTCCTCAATTCTaGCTAGATTCTTACTACCAC +
Preference number: 5 (lower is better)
Translates to: EVSPSQSLVIQSRASRVAILPQF*LDSYYH
Trigger: GTGGTAGTAAGAATCTAGCAAGAATTGAGGAAGAAT...TGCCACCCTTGACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGGAGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316099.9
ENST00000372920.1
CDS-3UTR CAA 90 bp AACTTTCACTCTCTCGATATACTAAGTACTTGGAATCAAGAGACCAGGGTTAGAAACACCATGGATCTCTaGGTGGCTCCGAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: NFHSLDILSTWNQETRVRNTMDL*VAPSSR
Trigger: CCTGCTGCTCGGAGCCACCAAGAGATCCATGGTGTT...TCTAACCCTGGTCTCTTGATTCCAAGTACTTAGTATATCGAGAGAGTGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp GTTGCTGAGGTGAGTGGGCATTGTGTTGGCAACGATGACGTTGGTTCCCATATGATTCTTCCTCAATTCTaGCTAGATTCTTACTACCAC +
Preference number: 5 (lower is better)
Translates to: VAEVSGHCVGNDDVGSHMILPQF*LDSYYH
Trigger: GTGGTAGTAAGAATCTAGCAAGAATTGAGGAAGAAT...CATATGGGAACCAACGTCATCGTTGCCAACACAATGCCCACTCACCTCAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS-3UTR CAA 90 bp ACAGCCTCCCCGAGGGCAAAGATCTTGTTCTTTGCTGAATTGCCAGCACTTAGACAAAGATCTTGTTCTTaGCTGAATTGCCAGCACTTA +
Preference number: 5 (lower is better)
Translates to: TASPRAKILFFAELPALRQRSCS*LNCQHL
Trigger: TAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTG...TCTAAGTGCTGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGGGGAGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGCCGAGGGCAAAGATCTaGTTCTTTGCTGAATTGCCA +
Preference number: 5 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLPRAKI*FFAELP
Trigger: TGGCAATTCAGCAAAGAACAAGATCTTTGCCCTCGG...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS-3UTR CAA 90 bp TCACATTACAATAAAGTTATTAAGGTGGAATGGGTTTCTCCTCCAGAAAGGGGTATCTCCTGCAACAGGTaGTCAATCTTGGCCATGCCG +
Preference number: 5 (lower is better)
Translates to: SHYNKVIKVEWVSPPERGISCNR*SILAMP
Trigger: CGGCATGGCCAAGATTGACAACCTGTTGCAGGAGAT...ACCCCTTTCTGGAGGAGAAACCCATTCCACCTTAATAACTTTATTGTAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS-3UTR CAA 90 bp TCACATTACAATAAAGTTATTAAGGTGGAATGGGTTTCTCCTCCAGAAAGGGGTCCCCAAGTCAAAGTCTaGTTATCCAGAGCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: SHYNKVIKVEWVSPPERGPQVKV*LSRAGR
Trigger: ACGCCCTGCTCTGGATAACAAGACTTTGACTTGGGG...ACCCCTTTCTGGAGGAGAAACCCATTCCACCTTAATAACTTTATTGTAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316099.9
CDS GCA 90 bp AATGAAGTCATGCGCCGATGGGGCACAGTCTTTGTACATGACAAGTaGTCGCAATTGACAGCTGCTATGATTTTATTATTGTCATTACCC +
Preference number: 5 (lower is better)
Translates to: NEVMRRWGTVFVHDK*SQLTAAMILLLSLP
Trigger: GGGTAATGACAATAATAAAATCATAGCAGCTGTCAATTGCGAGCACTTGTCATGTACAAAGACTGTGCCCCATCGGCGCATGACTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS-3UTR CAA 90 bp GTGCCTGAACAAATAGACCATTGCCTTGTTCCCATTTTTCTGGTGAGGAAACTGTTGTTCTTTGCTGAATaGCCAGCACTTAGAACAGTG +
Preference number: 5 (lower is better)
Translates to: VPEQIDHCLVPIFLVRKLLFFAE*PALRTV
Trigger: CACTGTTCTAAGTGCTGGCAATTCAGCAAAGAACAA...CAGTTTCCTCACCAGAAAAATGGGAACAAGGCAATGGTCTATTTGTTCAGGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443598.6
CDS CCA 90 bp AATATGAAAGAAAAGAGGAAGATGGGAAGTAAAGAGAAAGAAGGATaGAGGGAAGAAGTAAAAGAAGGGAAAGCCCAGGCCTTTGGAGTC +
Preference number: 5 (lower is better)
Translates to: NMKEKRKMGSKEKEG*REEVKEGKAQAFGV
Trigger: GACTCCAAAGGCCTGGGCTTTCCCTTCTTTTACTTCTTCCCTCCATCCTTCTTTCTCTTTACTTCCCATCTTCCTCTTTTCTTTCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS GCA 72 bp GAGTCGCATTCTCCCTGCCTCCACGCCGCGGCCACCTaGCCTACCCTGGGCGCCCACCCCGAAGGCCCCCGC +
Preference number: 6 (lower is better)
Translates to: ESHSPCLHAAAT*PTLGAHPEGPR
Trigger: GCGGGGGCCTTCGGGGTGGGCGCCCAGGGTAGGGCAGGTGGCCGCGGCGTGGAGGCAGGGAGAATGCGACTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000443598.6
CDS TCA 72 bp AACTCTCCACTGGAGCCCCGAGGGGCGCGTTCACGCTaGCCATGGCCAAGCCCACCCAGCCGGAGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: NSPLEPRGARSR*PWPSPPSRRAG
Trigger: CCCAGCTCTCCGGCTGGGTGGGCTTGGCCATGGTCAGCGTGAACGCGCCCCTCGGGGCTCCAGTGGAGAGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316673.8
CDS CAA 90 bp GCCCGGTCCCCGCAGATGGCACACAGGGCGCTGACACCCAGGCTGTaGGGCGCGTTGAGGTTGGTGCCTTCTGATGGGGACGTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: ARSPQMAHRALTPRL*GALRLVPSDGDVSP
Trigger: GGGAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCATCTGCGGGGACCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS CAA 90 bp GCCCGGTCCCCGCAGATGGCACACAGGGCGCTGACACCCAGGCTGTaGGGCGCGTTGAGGTTGGTGCCTTCTGATGGGGACGTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: ARSPQMAHRALTPRL*GALRLVPSDGDVSG
Trigger: ACCAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCATCTGCGGGGACCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609262.5
CDS CAA 90 bp GCCCGGTCCCCGCAGATGGCACACAGGGCGCTGACACCCAGGCTGTaGGGCGCGTTGAGGTTGGTGCCTTCTGATGGGGACGTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: ARSPQMAHRALTPRL*GALRLVPSDGDVSA
Trigger: TGCAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCATCTGCGGGGACCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682169.1
ENST00000684476.1
CDS GCA 72 bp CATGTCGACGAGGGTTTTGGAGAGTCGCATTCTCCCTaGCTCCACGCCGCGGCCACCTGCCCTACCCTGGGC +
Preference number: 6 (lower is better)
Translates to: HVDEGFGESHSP*LHAAATCPTLG
Trigger: GCCCAGGGTAGGGCAGGTGGCCGCGGCGTGGAGGCAGGGAGAATGCGACTCTCCAAAACCCTCGTCGACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000443598.6
CDS CAA 90 bp GCCCGGTCCCCGCAGATGGCACACAGGGCGCTGACACCCAGGCTGTaGGGCGCGTTGAGGTTGGTGCCTTCTGATGGGGACGTGTCATTG +
Preference number: 6 (lower is better)
Translates to: ARSPQMAHRALTPRL*GALRLVPSDGDVSL
Trigger: CAATGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCATCTGCGGGGACCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000316099.9
ENST00000415691.2
ENST00000443598.6
ENST00000619550.5
ENST00000681977.1
ENST00000683148.1
ENST00000683657.1
ENST00000684046.1
ENST00000684136.1
CDS TCA 72 bp ACCCAGGCTGTTGGGCGCGTTGAGGTTGGTGCCTTCTaGTGGGGACGTGTCTGGTGGGTCCTGGGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: TQAVGRVEVGAF*WGRVWWVLGEA
Trigger: GGCTTCCCCCAGGACCCACCAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609262.5
CDS CAA 72 bp GCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGATGGGGACGTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: AHRALTPRLLGA*RLVPSDGDVSP
Trigger: GGGAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS CAA 72 bp GCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGATGGGGACGTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: AHRALTPRLLGA*RLVPSDGDVSG
Trigger: ACCAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609262.5
CDS CAA 72 bp GCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGATGGGGACGTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: AHRALTPRLLGA*RLVPSDGDVSA
Trigger: TGCAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682169.1
ENST00000684476.1
CDS CAA 90 bp CCGCAGATGGCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGATGGGGACGTGTCATTGCCCATCGTC +
Preference number: 6 (lower is better)
Translates to: PQMAHRALTPRLLGA*RLVPSDGDVSLPIV
Trigger: GACGATGGGCAATGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCATCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316099.9
ENST00000415691.2
ENST00000443598.6
ENST00000619550.5
ENST00000681977.1
ENST00000683148.1
ENST00000683657.1
ENST00000684046.1
ENST00000684136.1
CDS CAA 90 bp CCGCAGATGGCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGATGGGGACGTGTCTCCCTGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: PQMAHRALTPRLLGA*RLVPSDGDVSPCGE
Trigger: TTCTCCACAGGGAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCATCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS CAA 90 bp ATGGCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTTGAGGTaGGTGCCTTCTGATGGGGACGTGTCTCCCTGTGGAGAACTGTCC +
Preference number: 6 (lower is better)
Translates to: MAHRALTPRLLGALR*VPSDGDVSPCGELS
Trigger: GGACAGTTCTCCACAGGGAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS TCA 72 bp CTTGCCCAAAGCGGCACAGTGGGGAAGCCAAGGAGCTaGGGGGTGAGCTCACTGTGTGAGGCCTGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: LAQSGTVGKPRS*GVSSLCEACLL
Trigger: CAGGAGACAGGCCTCACACAGTGAGCTCACCCCTCAGCTCCTTGGCTTCCCCACTGTGCCGCTTTGGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443598.6
ENST00000609795.5
CDS CCA 72 bp CACTGTAGTCGGCCATGTCCATGTCGACGAGGGTTTTaGAGAGTCGCATTCTCCCTGCCTCCACGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: HCSRPCPCRRGF*RVAFSLPPRRG
Trigger: GCCGCGGCGTGGAGGCAGGGAGAATGCGACTCTCCAAAACCCTCGTCGACATGGACATGGCCGACTACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316099.9
ENST00000372920.1
ENST00000415691.2
ENST00000443598.6
CDS CAA 72 bp AGGGCGCTGACACCCAGGCTGTTGGGCGCGTTGAGGTaGGTGCCTTCTGATGGGGACGTGTCATTGCCCATC +
Preference number: 6 (lower is better)
Translates to: RALTPRLLGALR*VPSDGDVSLPI
Trigger: GATGGGCAATGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316099.9
ENST00000415691.2
ENST00000443598.6
ENST00000619550.5
ENST00000681977.1
ENST00000683148.1
ENST00000683657.1
ENST00000684046.1
ENST00000684136.1
CDS CAA 72 bp GCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGATGGGGACGTGTCATTG +
Preference number: 6 (lower is better)
Translates to: AHRALTPRLLGA*RLVPSDGDVSL
Trigger: CAATGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316099.9
ENST00000415691.2
ENST00000443598.6
ENST00000619550.5
ENST00000681977.1
ENST00000683148.1
ENST00000683657.1
ENST00000684046.1
ENST00000684136.1
CDS CAA 90 bp ATGGCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTTGAGGTaGGTGCCTTCTGATGGGGACGTGTCATTGCCCATCGTCAACACC +
Preference number: 6 (lower is better)
Translates to: MAHRALTPRLLGALR*VPSDGDVSLPIVNT
Trigger: GGTGTTGACGATGGGCAATGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316099.9
ENST00000415691.2
ENST00000443598.6
ENST00000619550.5
ENST00000681977.1
ENST00000683148.1
ENST00000683657.1
ENST00000684046.1
ENST00000684136.1
CDS CAA 90 bp CCGCAGATGGCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTaGAGGTTGGTGCCTTCTGATGGGGACGTGTCTGCACATTCTCAA +
Preference number: 6 (lower is better)
Translates to: PQMAHRALTPRLLGA*RLVPSDGDVSAHSQ
Trigger: TTGAGAATGTGCAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCATCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682169.1
ENST00000684476.1
CDS TCA 72 bp ACCCAGGCTGTTGGGCGCGTTGAGGTTGGTGCCTTCTaGTGGGGACGTGTCTCCCTGTGGAGAACTGTCCAC +
Preference number: 6 (lower is better)
Translates to: TQAVGRVEVGAF*WGRVSLWRTVH
Trigger: GTGGACAGTTCTCCACAGGGAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS TCA 72 bp TCACGTCACTGTGCCAAGCGCCAAGCAGAGCCACTGTaGGGCAGTGAGGACTGGAAGGGCCATTGCCCATCG +
Preference number: 6 (lower is better)
Translates to: SRHCAKRQAEPL*GSEDWKGHCPS
Trigger: CGATGGGCAATGGCCCTTCCAGTCCTCACTGCCTCACAGTGGCTCTGCTTGGCGCTTGGCACAGTGACGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS TCA 72 bp ACCCAGGCTGTTGGGCGCGTTGAGGTTGGTGCCTTCTaGTGGGGACGTGTCATTGCCCATCGTCAACACCTG +
Preference number: 6 (lower is better)
Translates to: TQAVGRVEVGAF*WGRVIAHRQHL
Trigger: CAGGTGTTGACGATGGGCAATGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316099.9
ENST00000415691.2
ENST00000443598.6
ENST00000619550.5
ENST00000681977.1
ENST00000683148.1
ENST00000683657.1
ENST00000684046.1
ENST00000684136.1
CDS TCA 72 bp ACCCAGGCTGTTGGGCGCGTTGAGGTTGGTGCCTTCTaGTGGGGACGTGTCGTAAGAACTCTCCACTGGAGC +
Preference number: 6 (lower is better)
Translates to: TQAVGRVEVGAF*WGRVVRTLHWS
Trigger: GCTCCAGTGGAGAGTTCTTACGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316673.8
ENST00000457232.5
ENST00000609795.5
CDS GCA 72 bp TCCTGGGCTTGGCACGGACCTCCCAGCAGCATCTCCTaGAACAGGTTGTCAATCTTGGCCATGCCGAAGAGC +
Preference number: 6 (lower is better)
Translates to: SWAWHGPPSSIS*NRLSILAMPKS
Trigger: GCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGTCCGTGCCAAGCCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443598.6
ENST00000609795.5
CDS GCA 72 bp GACATCCTCCTCCTGCTGCTATGGGGTCCCGCACAGTaGACAACCTCTTCATCCTTGAGGGAGCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: DILLLLLWGPAQ*TTSSSLRELLL
Trigger: CAGCAGGAGCTCCCTCAAGGATGAAGAGGTTGTGCACTGTGCGGGACCCCATAGCAGCAGGAGGAGGATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609262.5
CDS GCA 72 bp GGCCTCCCTGTGGAGAACTGTCCACCCCTCCAGATATaGTCCAGTGATGTCGGAGGGGATGCCTCAATCTGG +
Preference number: 6 (lower is better)
Translates to: GLPVENCPPLQI*SSDVGGDASIW
Trigger: CCAGATTGAGGCATCCCCTCCGACATCACTGGAGCATATCTGGAGGGGTGGACAGTTCTCCACAGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS CAA 90 bp ATGGCACACAGGGCGCTGACACCCAGGCTGTTGGGCGCGTTGAGGTaGGTGCCTTCTGATGGGGACGTGTCTGCACATTCTCAAATTCCA +
Preference number: 6 (lower is better)
Translates to: MAHRALTPRLLGALR*VPSDGDVSAHSQIP
Trigger: TGGAATTTGAGAATGTGCAGACACGTCCCCATCAGAAGGCACCAACCTCAACGCGCCCAACAGCCTGGGTGTCAGCGCCCTGTGTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682169.1
ENST00000684476.1
CDS GCA 72 bp CGGCACTGGTTCCTCTTGTCTTTGTCCACCACGCACTaGCGGCTAAATCTGGGGAGGGCTTTGGATGGTTGG +
Preference number: 6 (lower is better)
Translates to: RHWFLLSLSTTH*RLNLGRALDGW
Trigger: CCAACCATCCAAAGCCCTCCCCAGATTTAGCCGGCAGTGCGTGGTGGACAAAGACAAGAGGAACCAGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 72 bp TCCTGGGTCGCTCTGCTGGTTGGTGTTAGAGCTGAGTaGGGAACCTTGACCTCTGGAGTACCAGAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SWVALLVGVRAE*GTLTSGVPEPC
Trigger: GCAGGGCTCTGGTACTCCAGAGGTCAAGGTTCCCAACTCAGCTCTAACACCAACCAGCAGAGCGACCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 90 bp TCCTGGGCTTGGCACGGACCTCCCAGCAGCATCTCCTGCAACAGGTaGTCAATCTTGGCCATGCCGAAGAGCTTGATGAACTGGATCTGC +
Preference number: 6 (lower is better)
Translates to: SWAWHGPPSSISCNR*SILAMPKSLMNWIC
Trigger: GCAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGTCCGTGCCAAGCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443598.6
ENST00000609795.5
CDS TCA 72 bp GGGGTCTCAGGGGTGGACATCTGTCCGTTGCTGAGGTaGGTGGGCATTGTGTTGGCAACGATGACGTTGGTT +
Preference number: 6 (lower is better)
Translates to: GVSGVDICPLLR*VGIVLATMTLV
Trigger: AACCAACGTCATCGTTGCCAACACAATGCCCACTCACCTCAGCAACGGACAGATGTCCACCCCTGAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415691.2
ENST00000457232.5
CDS GCA 72 bp TGTCTCCCTGTGGAGAACTGTCCACCCCTCCAGATATaGTCCAGTGATGTCGGAGGGGATGCCTCAATCTGG +
Preference number: 6 (lower is better)
Translates to: CLPVENCPPLQI*SSDVGGDASIW
Trigger: CCAGATTGAGGCATCCCCTCCGACATCACTGGAGCATATCTGGAGGGGTGGACAGTTCTCCACAGGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS CAA 72 bp AACCCTGGCTCTGCCAGTGATTCAAGCTGGTTGACCTaGGGCAAATGCCTAGCCCTCCAAGCCACAGCTTCC +
Preference number: 6 (lower is better)
Translates to: NPGSASDSSWLT*GKCLALQATAS
Trigger: GGAAGCTGTGGCTTGGAGGGCTAGGCATTTGCCCAAGGTCAACCAGCTTGAATCACTGGCAGAGCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 90 bp CTAGTGCAGCAGCAGCTTGTTTGCTATCTCTGGTGTGTTTTTGCCTaGCGCTCCTGGCGTGGTCCTCAGACAGGCCTAAAAGCCGTCCAG +
Preference number: 6 (lower is better)
Translates to: LVQQQLVCYLWCVFA*RSWRGPQTGLKAVQ
Trigger: CTGGACGGCTTTTAGGCCTGTCTGAGGACCACGCCAGGAGCGCAAGGCAAAAACACACCAGAGATAGCAAACAAGCTGCTGCTGCACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS CCA 72 bp TTAGCACAAGAGTCACCACTTCAGAGAGGTCTCCTGTaGCCTCCCCTATCTCCCAGCAGCATCTCCTGCAAC +
Preference number: 6 (lower is better)
Translates to: LAQESPLQRGLL*PPLSPSSISCN
Trigger: GTTGCAGGAGATGCTGCTGGGAGATAGGGGAGGCCACAGGAGACCTCTCTGAAGTGGTGACTCTTGTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619550.5
CDS CCA 72 bp GTTTGCTATCTCTGGTGTGTTTTTGCCTTGCGCTCCTaGCGTGGTCCTCAGACAGGCCTAAAAGCCGTCCAG +
Preference number: 6 (lower is better)
Translates to: VCYLWCVFALRS*RGPQTGLKAVQ
Trigger: CTGGACGGCTTTTAGGCCTGTCTGAGGACCACGCCAGGAGCGCAAGGCAAAAACACACCAGAGATAGCAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS CCA 72 bp CTCCACCTAGTGCAGCAGCAGCTTGTTTGCTATCTCTaGTGTGTTTTTGCCTTGCGCTCCTGGCGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: LHLVQQQLVCYL*CVFALRSWRGP
Trigger: AGGACCACGCCAGGAGCGCAAGGCAAAAACACACCAGAGATAGCAAACAAGCTGCTGCTGCACTAGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS CCA 72 bp GAAGAAATTGAGGCTCCTCACCTGCAGGAGTACATGTaGTTCTTCCGCACGCTCCTCCGGAAGAAGCCCTTG +
Preference number: 6 (lower is better)
Translates to: EEIEAPHLQEYM*FFRTLLRKKPL
Trigger: CAAGGGCTTCTTCCGGAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAGGTGAGGAGCCTCAATTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 72 bp TGGCACGGACCTCCCAGCAGCATCTCCTGCAACAGGTaGTCAATCTTGGCCATGCCGAAGAGCTTGATGAAC +
Preference number: 6 (lower is better)
Translates to: WHGPPSSISCNR*SILAMPKSLMN
Trigger: GTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGTCCGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443598.6
ENST00000609795.5
CDS CAA 90 bp TGGCACGGACCTCCCAGCAGCATCTCCTGCAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTGATGAACTGGATCTGCTCGATCATC +
Preference number: 6 (lower is better)
Translates to: WHGPPSSISCNRLSI*AMPKSLMNWICSII
Trigger: GATGATCGAGCAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGGTCCGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443598.6
ENST00000609795.5
CDS CAA 90 bp TCCTGGGTCGCTCTGCTGGTTGGTGTTAGAGCTGAGTTGGGAACCTaGACCTCTGGAGTACCAGAGCCCTGCTATTTCCACCACATCCTA +
Preference number: 6 (lower is better)
Translates to: SWVALLVGVRAELGT*TSGVPEPCYFHHIL
Trigger: TAGGATGTGGTGGAAATAGCAGGGCTCTGGTACTCCAGAGGTCAAGGTTCCCAACTCAGCTCTAACACCAACCAGCAGAGCGACCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 90 bp AACATGTGGTCCTGGGTCGCTCTGCTGGTTGGTGTTAGAGCTGAGTaGGGAACCTTGACCTCTGGAGTACCAGAGCCCTGCTATTTCCAC +
Preference number: 6 (lower is better)
Translates to: NMWSWVALLVGVRAE*GTLTSGVPEPCYFH
Trigger: GTGGAAATAGCAGGGCTCTGGTACTCCAGAGGTCAAGGTTCCCAACTCAGCTCTAACACCAACCAGCAGAGCGACCCAGGACCACATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 90 bp GATCCTTCCCATTTTGCAGAACAATTCTGCCAGTCCAGCCTCGTGTaGAGCACTACAGAGGATACAGGCTGGGCCAGGCTGTGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: DPSHFAEQFCQSSLV*STTEDTGWARLWRE
Trigger: TTCCCTCCACAGCCTGGCCCAGCCTGTATCCTCTGTAGTGCTCAACACGAGGCTGGACTGGCAGAATTGTTCTGCAAAATGGGAAGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683148.1
CDS TCA 72 bp CTCTGCTGGTTGGTGTTAGAGCTGAGTTGGGAACCTTaGCCTCTGGAGTACCAGAGCCCTGCTATTTCCACC +
Preference number: 6 (lower is better)
Translates to: LCWLVLELSWEP*PLEYQSPAIST
Trigger: GGTGGAAATAGCAGGGCTCTGGTACTCCAGAGGTCAAGGTTCCCAACTCAGCTCTAACACCAACCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CCA 72 bp ATATGCTCCAGTGATGTCGGAGGGGATGCCTCAATCTaGCGAGACGCAGCGGCAACAAAATCATTGCCCATC +
Preference number: 6 (lower is better)
Translates to: ICSSDVGGDASI*RDAAATKSLPI
Trigger: GATGGGCAATGATTTTGTTGCCGCTGCGTCTCGCCAGATTGAGGCATCCCCTCCGACATCACTGGAGCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372920.1
CDS CCA 72 bp ATATGCTCCAGTGATGTCGGAGGGGATGCCTCAATCTaGCGAGACGCAGCGGCAACAAAATCATCACGTCAC +
Preference number: 6 (lower is better)
Translates to: ICSSDVGGDASI*RDAAATKSSRH
Trigger: GTGACGTGATGATTTTGTTGCCGCTGCGTCTCGCCAGATTGAGGCATCCCCTCCGACATCACTGGAGCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS CAA 72 bp CCTCCCCTATCTCCCAGCAGCATCTCCTGCAACAGGTaGTCAATCTTGGCCATGCCGAAGAGCTTGATGAAC +
Preference number: 6 (lower is better)
Translates to: PPLSPSSISCNR*SILAMPKSLMN
Trigger: GTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGATAGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619550.5
CDS CAA 72 bp GCTCTGCTGGTTGGTGTTAGAGCTGAGTTGGGAACCTaGACCTCTGGAGTACCAGAGCCCTGCTATTTCCAC +
Preference number: 6 (lower is better)
Translates to: ALLVGVRAELGT*TSGVPEPCYFH
Trigger: GTGGAAATAGCAGGGCTCTGGTACTCCAGAGGTCAAGGTTCCCAACTCAGCTCTAACACCAACCAGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 90 bp CCTCCCCTATCTCCCAGCAGCATCTCCTGCAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTGATGAACTGGATCTGCTCGATCATC +
Preference number: 6 (lower is better)
Translates to: PPLSPSSISCNRLSI*AMPKSLMNWICSII
Trigger: GATGATCGAGCAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGATAGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619550.5
CDS GCA 72 bp TCTGCCAGTGATTCAAGCTGGTTGACCTTGGGCAAATaGCTAGCCCTCCAAGCCACAGCTTCCTCCTCTATA +
Preference number: 6 (lower is better)
Translates to: SASDSSWLTLGK*LALQATASSSI
Trigger: TATAGAGGAGGAAGCTGTGGCTTGGAGGGCTAGGCATTTGCCCAAGGTCAACCAGCTTGAATCACTGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CCA 72 bp CACTGCCGGCTAAATCTGGGGAGGGCTTTGGATGGTTaGATGGAGAAGACACAACTTCCTCCTCTTAGGACA +
Preference number: 6 (lower is better)
Translates to: HCRLNLGRALDG*MEKTQLPPLRT
Trigger: TGTCCTAAGAGGAGGAAGTTGTGTCTTCTCCATCCAACCATCCAAAGCCCTCCCCAGATTTAGCCGGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 72 bp TCTCCCAGCAGCATCTCCTGCAACAGGTTGTCAATCTaGGCCATGCCGAAGAGCTTGATGAACTGGATCTGC +
Preference number: 6 (lower is better)
Translates to: SPSSISCNRLSI*AMPKSLMNWIC
Trigger: GCAGATCCAGTTCATCAAGCTCTTCGGCATGGCCAAGATTGACAACCTGTTGCAGGAGATGCTGCTGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619550.5
CDS CAA 72 bp CAGCAGCTTGTTTGCTATCTCTGGTGTGTTTTTGCCTaGCGCTCCTGGCGTGGTCCTCAGACAGGCCTAAAA +
Preference number: 6 (lower is better)
Translates to: QQLVCYLWCVFA*RSWRGPQTGLK
Trigger: TTTTAGGCCTGTCTGAGGACCACGCCAGGAGCGCAAGGCAAAAACACACCAGAGATAGCAAACAAGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS CAA 90 bp CTGAATGTTAACCCTGGCTCTGCCAGTGATTCAAGCTGGTTGACCTaGGGCAAATGCCTAGCCCTCCAAGCCACAGCTTCCTCCTCTATA +
Preference number: 6 (lower is better)
Translates to: LNVNPGSASDSSWLT*GKCLALQATASSSI
Trigger: TATAGAGGAGGAAGCTGTGGCTTGGAGGGCTAGGCATTTGCCCAAGGTCAACCAGCTTGAATCACTGGCAGAGCCAGGGTTAACATTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 90 bp TTGTCTTTGTCCACCACGCACTGCCGGCTAAATCTGGGGAGGGCTTaGGATGGTTGGATGGAGAAGACACAACTTCCTCCTCTTAGGACA +
Preference number: 6 (lower is better)
Translates to: LSLSTTHCRLNLGRA*DGWMEKTQLPPLRT
Trigger: TGTCCTAAGAGGAGGAAGTTGTGTCTTCTCCATCCAACCATCCAAAGCCCTCCCCAGATTTAGCCGGCAGTGCGTGGTGGACAAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 90 bp ATTGCCTTGCCACATTCACACAGGTTGGAAGGATCTATGCCGGATTaGAGCCCAGATCTTTCTGGTTCCAGAGCTGGAGGTGGTCTTGTC +
Preference number: 6 (lower is better)
Translates to: IALPHSHRLEGSMPD*SPDLSGSRAGGGLV
Trigger: GACAAGACCACCTCCAGCTCTGGAACCAGAAAGATCTGGGCTCAAATCCGGCATAGATCCTTCCAACCTGTGTGAATGTGGCAAGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS TCA 72 bp CACATTCACACAGGTTGGAAGGATCTATGCCGGATTTaGGCCCAGATCTTTCTGGTTCCAGAGCTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: HIHTGWKDLCRI*AQIFLVPELEV
Trigger: CACCTCCAGCTCTGGAACCAGAAAGATCTGGGCTCAAATCCGGCATAGATCCTTCCAACCTGTGTGAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS TCA 72 bp AAAAACAGCACCAGACTGGAAGACGGGCTCATCTACTaGGGCTTCAGGAGAGGCCCCATGGAATGGGAAAAA +
Preference number: 6 (lower is better)
Translates to: KNSTRLEDGLIY*GFRRGPMEWEK
Trigger: TTTTTCCCATTCCATGGGGCCTCTCCTGAAGCCTCAGTAGATGAGCCCGTCTTCCAGTCTGGTGCTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CCA 72 bp CCCTTAATACTGGTCACAATGAGATTTCAGGGATGGTaGGAGGCGGTCTCCATGGAAACTGCAGACCGTAAG +
Preference number: 6 (lower is better)
Translates to: PLILVTMRFQGW*EAVSMETADRK
Trigger: CTTACGGTCTGCAGTTTCCATGGAGACCGCCTCCCACCATCCCTGAAATCTCATTGTGACCAGTATTAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609262.5
CDS CCA 72 bp AGGAAGCCTGGCAAGACCTTAATAAATGTTGTGCTCTaGTCTTCTCCTCCTTTGTCCAGGATGGGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: RKPGKTLINVVL*SSPPLSRMGLG
Trigger: CCCCAGACCCATCCTGGACAAAGGAGGAGAAGACCAGAGCACAACATTTATTAAGGTCTTGCCAGGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000681977.1
ENST00000682169.1
ENST00000684046.1
ENST00000684136.1
ENST00000684476.1
CDS CCA 72 bp TGTGAACTCAGTGTACAGAACCCAATAGGAGAAGTCTaGCAGAGCGTTCTGGAGAGAGAGTCAGGGATGGCT +
Preference number: 6 (lower is better)
Translates to: CELSVQNPIGEV*QSVLERESGMA
Trigger: AGCCATCCCTGACTCTCTCTCCAGAACGCTCTGCCAGACTTCTCCTATTGGGTTCTGTACACTGAGTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 72 bp GATCTTCCAAGGATCAGTTGTGGGGCCCTAGGCAAGTaGCTTAACCATTGTGGGCCTCAGTTCCTTCATCCA +
Preference number: 6 (lower is better)
Translates to: DLPRISCGALGK*LNHCGPQFLHP
Trigger: TGGATGAAGGAACTGAGGCCCACAATGGTTAAGCAACTTGCCTAGGGCCCCACAACTGATCCTTGGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000681977.1
ENST00000682169.1
ENST00000684046.1
ENST00000684136.1
ENST00000684476.1
CDS CAA 72 bp CCACATTCACACAGGTTGGAAGGATCTATGCCGGATTaGAGCCCAGATCTTTCTGGTTCCAGAGCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: PHSHRLEGSMPD*SPDLSGSRAGG
Trigger: ACCTCCAGCTCTGGAACCAGAAAGATCTGGGCTCAAATCCGGCATAGATCCTTCCAACCTGTGTGAATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS CAA 90 bp CTGAATCATGCTTATTCATTAGTTCATTCAGGCCACACATGTTTATaGAGCACCTCCTGCATGCCAGGCCTTGAACTAGGTCCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: LNHAYSLVHSGHTCL*STSCMPGLELGPPP
Trigger: GGGCGGGGGACCTAGTTCAAGGCCTGGCATGCAGGAGGTGCTCAATAAACATGTGTGGCCTGAATGAACTAATGAATAAGCATGATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683148.1
CDS CCA 72 bp AATCCCTTAATACTGGTCACAATGAGATTTCAGGGATaGTGGGAGGCGGTCTCCATGGAAACTGCAGACCGT +
Preference number: 6 (lower is better)
Translates to: NPLILVTMRFQG*WEAVSMETADR
Trigger: ACGGTCTGCAGTTTCCATGGAGACCGCCTCCCACCATCCCTGAAATCTCATTGTGACCAGTATTAAGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609262.5
CDS CCA 72 bp GTCAATCTCCTATTTGTCCCAAAAACAGCACCAGACTaGAAGACGGGCTCATCTACTGAGGCTTCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: VNLLFVPKTAPD*KTGSSTEASGE
Trigger: CTCTCCTGAAGCCTCAGTAGATGAGCCCGTCTTCCAGTCTGGTGCTGTTTTTGGGACAAATAGGAGATTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CCA 72 bp AGAGTCAGGGATGGCTTAGGAGGTGTGCACTGTACCTaGGTCAAAGAAGATGATGGCTTTGAGGTAGGCATA +
Preference number: 6 (lower is better)
Translates to: RVRDGLGGVHCT*VKEDDGFEVGI
Trigger: TATGCCTACCTCAAAGCCATCATCTTCTTTGACCCAGGTACAGTGCACACCTCCTAAGCCATCCCTGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 90 bp AAACTGAGGCTCAGAGAGGAAATTGCCTTGCCACATTCACACAGGTaGGAAGGATCTATGCCGGATTTGAGCCCAGATCTTTCTGGTTCC +
Preference number: 6 (lower is better)
Translates to: KLRLREEIALPHSHR*EGSMPDLSPDLSGS
Trigger: GGAACCAGAAAGATCTGGGCTCAAATCCGGCATAGATCCTTCCAACCTGTGTGAATGTGGCAAGGCAATTTCCTCTCTGAGCCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682427.1
CDS GCA 72 bp AGCATCAGTGATCCTTCCCATTTTGCAGAACAATTCTaGCAGTCCAGCCTCGTGTTGAGCACTACAGAGGAT +
Preference number: 6 (lower is better)
Translates to: SISDPSHFAEQF*QSSLVLSTTED
Trigger: ATCCTCTGTAGTGCTCAACACGAGGCTGGACTGGCAGAATTGTTCTGCAAAATGGGAAGGATCACTGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683148.1
CDS CAA 72 bp AATGGGAATAACAACAGTAACCATCTCACAGGGGTGTaGACAGGTGAAATGAAGTCATGCGCCGATGGGGCA +
Preference number: 6 (lower is better)
Translates to: NGNNNSNHLTGV*TGEMKSCADGA
Trigger: TGCCCCATCGGCGCATGACTTCATTTCACCTGTCAACACCCCTGTGAGATGGTTACTGTTGTTATTCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS GCA 72 bp ATGCGCCGATGGGGCACAGTCTTTGTACATGACAAGTaGTCGCAATTGACAGCTGCTATGATTTTATTATTG +
Preference number: 6 (lower is better)
Translates to: MRRWGTVFVHDK*SQLTAAMILLL
Trigger: CAATAATAAAATCATAGCAGCTGTCAATTGCGAGCACTTGTCATGTACAAAGACTGTGCCCCATCGGCGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CAA 90 bp GTACATGACAAGTGCTCGCAATTGACAGCTGCTATGATTTTATTATaGTCATTACCCAGAACAGGAGATGCTTTCGAAAGAGGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: VHDKCSQLTAAMILL*SLPRTGDAFERGLS
Trigger: GGAGAGCCCTCTTTCGAAAGCATCTCCTGTTCTGGGTAATGACAATAATAAAATCATAGCAGCTGTCAATTGCGAGCACTTGTCATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS CCA 72 bp CATGGAATGGGAAAAACAACAATGGGCTCAAGGGGATaGGTAAATACACACAAAGACTTAGTATTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: HGMGKTTMGSRG*VNTHKDLVLCL
Trigger: CAGGCACAATACTAAGTCTTTGTGTGTATTTACCCATCCCCTTGAGCCCATTGTTGTTTTTCCCATTCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683657.1
CDS TCA 72 bp TTCTCAAACACAACACTCTCTCCTATCCGCAGCCCTTaGAGTAGTTTCTTCTTCTTGGAATATTCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: FSNTTLSPIRSP*SSFFFLEYSSL
Trigger: AAGAGAGGAATATTCCAAGAAGAAGAAACTACTTCAAGGGCTGCGGATAGGAGAGAGTGTTGTGTTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619550.5