Pregenerated sensors for HMSD (Homo sapiens)
Ensembl gene IDs: ENSG00000221887Ensembl transcript IDs: ENST00000408945.5, ENST00000498680.1
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTaGCTGGACTATCCACAAGGCAGTGCAAAGAGGTGTGTGTTTCCC | + |
|
Preference number: 1 (lower is better) Translates to: EVTPFTLPTPTSYST*LDYPQGSAKRCVFP Trigger: GGGAAACACACACCTCTTTGCACTGCCTTGTGGATAGTCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR CCA 90 bp | TTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTaGACTATCCACAAGGCAGTGCAAAGAGGTGTGTGTTTCCCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: LLHLHSPLPPLTPLD*TIHKAVQRGVCFPE Trigger: TTCAGGGAAACACACACCTCTTTGCACTGCCTTGTGGATAGTCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR TCA 90 bp | TGTAACACTCAGAGGCTCTCTCTGCAGTGGAAGAATCATATGGGCTaGTTATTCCCCACCTTTCAGACTTCTTTCCAAGTCCAAGTGTTG | + |
|
Preference number: 1 (lower is better) Translates to: CNTQRLSLQWKNHMG*LFPTFQTSFQVQVL Trigger: CAACACTTGGACTTGGAAAGAAGTCTGAAAGGTGGGGAATAATCAGCCCATATGATTCTTCCACTGCAGAGAGAGCCTCTGAGTGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTTCATGGCCAGGCCTCTaGGGCCCTGAGAAGCCCATA | + |
|
Preference number: 2 (lower is better) Translates to: FISHNCSQGGRSPHAMRGSWPGL*GPEKPI Trigger: TATGGGCTTCTCAGGGCCTCAGAGGCCTGGCCATGA...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGCAGGGAGGGTACAGCTaGCTGCCTGGTAAGGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: SLLVTTAHREGGHHMPCGQGGYS*LPGKGT Trigger: AGTTCCCTTACCAGGCAGTCAGCTGTACCCTCCCTG...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR CAA 90 bp | GTGCAAAGAGGTGTGTGTTTCCCTGAAGAAGAGGGTGCCACCCTGTaGCTCCTGGCTGTAACACTCAGAGGCTCTCTCTGCAGTGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VQRGVCFPEEEGATL*LLAVTLRGSLCSGR Trigger: TCTTCCACTGCAGAGAGAGCCTCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACACACACCTCTTTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGATATGGGTTGTGTCAGTaGAGTTCTGAGGGCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: CFPEEEGATLLLLAVTLRYGLCQ*SSEGSG Trigger: CCCTGAGCCCTCAGAACTTCACTGACACAACCCATA...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGAAAACCCGGCAACCTCTaGTACTCCCTCTTTCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: CFPEEEGATLLLLAVTLRKPGNL*YSLFPL Trigger: GAGAGGAAAGAGGGAGTATCAGAGGTTGCCGGGTTT...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGACAGGGTCTTTCTGGCTaGAAGGGGGTTGATGGAATG | + |
|
Preference number: 2 (lower is better) Translates to: CFPEEEGATLLLLAVTLRQGLSG*KGVDGM Trigger: CATTCCATCAACCCCCTTGCAGCCAGAAAGACCCTG...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTGTGGAAGGCAGGCTTTaGAGTAACAAGAGGAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FISHNCSQGGRSPHAMRGVEGRL*SNKRKR Trigger: CCTCTTCCTCTTGTTACTGCAAAGCCTGCCTTCCAC...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGAGCCTTCCTGCTCAGTaGGTGAATAGGGTGCACATA | + |
|
Preference number: 2 (lower is better) Translates to: SLLVTTAHREGGHHMPCGSLPAQ*VNRVHI Trigger: TATGTGCACCCTATTCACCCACTGAGCAGGAAGGCT...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGAGTGTCAGTGAAGTTCTaGGGGCTCAGGGTCTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGVSVKF*GLRVFL Trigger: CAGAAAGACCCTGAGCCCTCAGAACTTCACTGACAC...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGCTTACTCCACTTGACTaGACTATCCACAAGGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SLLVTTAHREGGHHMPCGLTPLD*TIHKAV Trigger: CACTGCCTTGTGGATAGTCCAGTCAAGTGGAGTAAG...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR CAA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTaGACTGGACTATCCACAAGGCAGTGCAAAGAGGTGTGTGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RGYSIYTPHSHLLLH*TGLSTRQCKEVCVS Trigger: GGAAACACACACCTCTTTGCACTGCCTTGTGGATAGTCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTGTATGGCAATACCAGTaGGGGAGACAGCTAGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: FISHNCSQGGRSPHAMRGVWQYQ*GRQLEI Trigger: AATTTCTAGCTGTCTCCCTCACTGGTATTGCCATAC...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGACTATCCACAAGGCAGTGCAAAGAGGTGTGTGTTTCCCTGAAGAAGAGGGTTCCAAGTCCAAGTGTTaGGCAGAGGAGGAAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: WTIHKAVQRGVCFPEEEGSKSKC*AEEEEE Trigger: TTCCTCTTCCTCCTCTGCCCAACACTTGGACTTGGA...ACCCTCTTCTTCAGGGAAACACACACCTCTTTGCACTGCCTTGTGGATAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGACTAAGTAGCTGGCTTTaGTACAAAGGGAAAAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CFPEEEGATLLLLAVTLRLSSWL*YKGKSW Trigger: CCAACTTTTCCCTTTGTACCAAAGCCAGCTACTTAG...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTCTGAAGCTAAGTAGCTaGCTTTGGTACAAAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FISHNCSQGGRSPHAMRGLKLSS*LWYKGK Trigger: TTTCCCTTTGTACCAAAGCCAGCTACTTAGCTTCAG...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGACTATCCACAAGGCAGTGCAAAGAGGTGTGTGTTTCCCTGAAGAAGAGGGTGTGTTCCCTTATCACTaGTCACAGCAGTTGCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: WTIHKAVQRGVCFPEEEGVFPYH*SQQLHF Trigger: GAAATGCAACTGCTGTGATCAGTGATAAGGGAACAC...ACCCTCTTCTTCAGGGAAACACACACCTCTTTGCACTGCCTTGTGGATAGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGAAGTGGAAGAATCATATaGGCTGATTATTCCCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGSGRII*ADYSPP Trigger: AGGTGGGGAATAATCAGCCCATATGATTCTTCCACT...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTTATGGAAAGAAAATATaGGTTGTGTCAGTGAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: FISHNCSQGGRSPHAMRGYGKKI*VVSVKF Trigger: GAACTTCACTGACACAACCCATATTTTCTTTCCATA...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR TCA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGAAGAATCATATGGGCTaGTTATTCCCCACCTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLKNHMG*LFPTFQ Trigger: CTGAAAGGTGGGGAATAATCAGCCCATATGATTCTT...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGACTATCCACAAGGCAGTGCAAAGAGGTGTGTGTTTCCCTGAAGAAGAGGGTAAAAGGTCTACGAGTTaGCAATATTTCCAAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: WTIHKAVQRGVCFPEEEGKRSTS*QYFQRK Trigger: CTTTCTTTGGAAATATTGCCAACTCGTAGACCTTTT...ACCCTCTTCTTCAGGGAAACACACACCTCTTTGCACTGCCTTGTGGATAGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CCA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGTACAAAGGGAAAAGTTaGCCAGTTATGGAAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLYKGKS*PVMERK Trigger: TTTTCTTTCCATAACTGGCCAACTTTTCCCTTTGTA...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGAGGGTGCCACCCTGTaGCTCCTGGCTGTAACACTC | + |
|
Preference number: 3 (lower is better) Translates to: SLLVTTAHREGGHHMPCGEGATL*LLAVTL Trigger: GAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTC...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR TCA 72 bp | TGCGGGGTCACAGGAGAGTTGCATTTGGGAATAGAGTaGACCAGTAGGGGCTGTGGAAGGCAGGCTTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: CGVTGELHLGIE*TSRGCGRQALQ Trigger: CTGCAAAGCCTGCCTTCCACAGCCCCTACTGGTTCACTCTATTCCCAAATGCAACTCTCCTGTGACCCCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR TCA 72 bp | TATCCACAAGGCAGTGCAAAGAGGTGTGTGTTTCCCTaGAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: YPQGSAKRCVFP*RRGCHPVAPGC Trigger: ACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACACACACCTCTTTGCACTGCCTTGTGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGTTCCAAGTCCAAGTGTaGGGCAGAGGAGGAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLLVTTAHREGGHHMPCGFQVQV*GRGGRG Trigger: TCCTCTTCCTCCTCTGCCCAACACTTGGACTTGGAA...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR CCA 72 bp | AGGGAACTTAGAAGGGGGAAGAGCCTTCCTGCTCAGTaGGTGAATAGGGTGCACATATCTGACAAGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RELRRGKSLPAQ*VNRVHISDKSR Trigger: CCTGCTCTTGTCAGATATGTGCACCCTATTCACCCACTGAGCAGGAAGGCTCTTCCCCCTTCTAAGTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTCACCTCTTACTCCACTaGACTGGACTATCCACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FISHNCSQGGRSPHAMRGHLLLH*TGLSTR Trigger: CCTTGTGGATAGTCCAGTCAAGTGGAGTAAGAGGTG...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR TCA 72 bp | CCATTTACACTCCCCACTCCCACCTCTTACTCCACTTaGCTGGACTATCCACAAGGCAGTGCAAAGAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PFTLPTPTSYST*LDYPQGSAKRC Trigger: ACACCTCTTTGCACTGCCTTGTGGATAGTCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR CCA 72 bp | TTACACTCCCCACTCCCACCTCTTACTCCACTTGACTaGACTATCCACAAGGCAGTGCAAAGAGGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHSPLPPLTPLD*TIHKAVQRGVC Trigger: ACACACACCTCTTTGCACTGCCTTGTGGATAGTCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR TCA 72 bp | ACAAGAGGAAGAGGCGATTCCTGGCTCCTCCAGATGTaGCAGGCTTGTTTGAATAATTTTCCAGGCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRGRGDSWLLQM*QACLNNFPGWR Trigger: CCTCCAGCCTGGAAAATTATTCAAACAAGCCTGTCACATCTGGAGGAGCCAGGAATCGCCTCTTCCTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGCTGGCTGCAAGGGGGTaGATGGAATGTCTTTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLLAARG*MECLFS Trigger: GCTAAAAAGACATTCCATCAACCCCCTTGCAGCCAG...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTACAAAGGGAAAAGTaGGCCAGTTATGGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLLVTTAHREGGHHMPCGVQREK*ASYGKK Trigger: TTTCTTTCCATAACTGGCCAACTTTTCCCTTTGTAC...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR TCA 72 bp | TGGCCAGTTATGGAAAGAAAATATGGGTTGTGTCAGTaGAGTTCTGAGGGCTCAGGGTCTTTCTGGCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: WPVMERKYGLCQ*SSEGSGSFWLQ Trigger: TTGCAGCCAGAAAGACCCTGAGCCCTCAGAACTTCACTGACACAACCCATATTTTCTTTCCATAACTGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR CCA 72 bp | ATCTTCAGTCTCATTCTCTCCCTGAAGCTAAGTAGCTaGCTTTGGTACAAAGGGAAAAGTTGGCCAGTTATG | + |
|
Preference number: 3 (lower is better) Translates to: IFSLILSLKLSS*LWYKGKSWPVM Trigger: CATAACTGGCCAACTTTTCCCTTTGTACCAAAGCCAGCTACTTAGCTTCAGGGAGAGAATGAGACTGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGGAAAAGGTCTACGAGTaGGCAATATTTCCAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLEKVYE*AIFPKK Trigger: TTTCTTTGGAAATATTGCCAACTCGTAGACCTTTTC...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGAGACATCACAGATACTaGATAAGGGAAAAGCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLRHHRY*IREKLK Trigger: CTTTAGCTTTTCCCTTATCAAGTATCTGTGATGTCT...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGTGCCCAGGAGCGAAGTaGGACCGGGTCGGAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLVTTAHREGGHHMPCGCPGAK*DRVGEA Trigger: CGCCTCTCCGACCCGGTCTCACTTCGCTCCTGGGCA...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTCAGGCTGGAGGGAAGTaGGCCACGTTGAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FISHNCSQGGRSPHAMRGQAGGK*ATLRPR Trigger: CCTGGGTCTCAACGTGGCTCACTTCCCTCCAGCCTG...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGAGGAAGTGAGCCACGTTaGGACCCAGGGAGGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: CFPEEEGATLLLLAVTLRGSEPR*DPGRVQ Trigger: CTGTACCCTCCCTGGGTCTCAACGTGGCTCACTTCC...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGAAGGCCTCTGAGGCCCTaGGAAGCCCATAGATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CFPEEEGATLLLLAVTLRRPLRP*EAHRCQ Trigger: TTGACATCTATGGGCTTCTCAGGGCCTCAGAGGCCT...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGATCATGGCCAGGCCTCTaGGGCCCTGAGAAGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGSWPGL*GPEKPI Trigger: TATGGGCTTCTCAGGGCCTCAGAGGCCTGGCCATGA...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTAAACCCGGCAACCTCTaGTACTCCCTCTTTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FISHNCSQGGRSPHAMRGKPGNL*YSLFPL Trigger: GAGAGGAAAGAGGGAGTATCAGAGGTTGCCGGGTTT...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGACAGGGAGGGTACAGCTaGCTGCCTGGTAAGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGQGGYS*LPGKGT Trigger: AGTTCCCTTACCAGGCAGTCAGCTGTACCCTCCCTG...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGAAGGTGTGTGTTTCCCTaGAGAAGAGGGTGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGRCVFP*RRGCHP Trigger: AGGGTGGCACCCTCTTCTTCAGGGAAACACACACCT...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGCATTTGGGAATAGAGTaGACCAGTAGGGGCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLVTTAHREGGHHMPCGHLGIE*TSRGCG Trigger: TCCACAGCCCCTACTGGTTCACTCTATTCCCAAATG...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGGGGAATAGAGATGTCTaGGCGGCGCCGGGTGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLGNRDV*AAPGVS Trigger: ACTAACACCCGGCGCCGCTCAGACATCTCTATTCCC...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | TGGACTATCCACAAGGCAGTGCAAAGAGGTGTGTGTTTCCCTGAAGAAGAGGGTTATGGGTTGTGTCAGTaGAGTTCTGAGGGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WTIHKAVQRGVCFPEEEGYGLCQ*SSEGSG Trigger: CCCTGAGCCCTCAGAACTTCACTGACACAACCCATA...ACCCTCTTCTTCAGGGAAACACACACCTCTTTGCACTGCCTTGTGGATAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR GCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGACAGGGTCTTTCTGGCTaGAAGGGGGTTGATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGQGLSG*KGVDGM Trigger: CATTCCATCAACCCCCTTGCAGCCAGAAAGACCCTG...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTCTTACTCCACTTGACTaGACTATCCACAAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FISHNCSQGGRSPHAMRGLTPLD*TIHKAV Trigger: CACTGCCTTGTGGATAGTCCAGTCAAGTGGAGTAAG...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR CAA 72 bp | TCCATTTACACTCCCCACTCCCACCTCTTACTCCACTaGACTGGACTATCCACAAGGCAGTGCAAAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIYTPHSHLLLH*TGLSTRQCKEV Trigger: CACCTCTTTGCACTGCCTTGTGGATAGTCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGAGTGTTCCCTTATCACTaGTCACAGCAGTTGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFPEEEGATLLLLAVTLRVFPYH*SQQLHF Trigger: GAAATGCAACTGCTGTGATCAGTGATAAGGGAACAC...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGAACCTCTTACTCCACTTaGCTGGACTATCCACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGTSYST*LDYPQG Trigger: GCCTTGTGGATAGTCCAGTCAAGTGGAGTAAGAGGT...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGATTCCTGCTCAGTGGGTaGATAGGGTGCACATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGFLLSG*IGCTYL Trigger: CAGATATGTGCACCCTATTCACCCACTGAGCAGGAA...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGATCCAAGTCCAAGTGTTaGGCAGAGGAGGAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGSKSKC*AEEEEE Trigger: TTCCTCTTCCTCCTCTGCCCAACACTTGGACTTGGA...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGAAACACCCTCCTGCTTaGATACTTAGAGGTTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLVTTAHREGGHHMPCGKHPPA*ILRGYS Trigger: GGAGTAACCTCTAAGTATCCAAGCAGGAGGGTGTTT...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGAAGCCTTCCTGCTCAGTaGGTGAATAGGGTGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGSLPAQ*VNRVHI Trigger: TATGTGCACCCTATTCACCCACTGAGCAGGAAGGCT...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGAAAGAATCATATGGGCTaGTTATTCCCCACCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFPEEEGATLLLLAVTLRKNHMG*LFPTFQ Trigger: CTGAAAGGTGGGGAATAATCAGCCCATATGATTCTT...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGCTGAAGCTAAGTAGCTaGCTTTGGTACAAAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLVTTAHREGGHHMPCGLKLSS*LWYKGK Trigger: TTTCCCTTTGTACCAAAGCCAGCTACTTAGCTTCAG...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGAGTATGGCAATACCAGTaGGGGAGACAGCTAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGVWQYQ*GRQLEI Trigger: AATTTCTAGCTGTCTCCCTCACTGGTATTGCCATAC...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGATTTACTAAAACAAAGTaGCTGAGACATCTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFPEEEGATLLLLAVTLRFTKTK*LRHLSC Trigger: GCAGCTCAGATGTCTCAGGCACTTTGTTTTAGTAAA...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGAAATAATTTTCCAGGCTaGAGGGAAGTGAGCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGNNFPG*REVSHV Trigger: AACGTGGCTCACTTCCCTCCAGCCTGGAAAATTATT...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGAAATTGCAACAAGAAGTaGCTGAAAACCTCGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CFPEEEGATLLLLAVTLRNCNKK*LKTSMN Trigger: ATTCATCGAGGTTTTCAGTCACTTCTTGTTGCAATT...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGATGTGACAGGCTTGTTTaGATAATTTTCCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGCDRLV*IIFQAG Trigger: TCCAGCCTGGAAAATTATTCAAACAAGCCTGTCACA...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR GCA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGTTTATTAGTCACAACTaGTCACAGGGAGGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLFISHN*SQGGRS Trigger: TGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGAAAAGGTCTACGAGTTaGCAATATTTCCAAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLVTTAHREGGHHMPCGKRSTS*QYFQRK Trigger: CTTTCTTTGGAAATATTGCCAACTCGTAGACCTTTT...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGATATGGAAAGAAAATATaGGTTGTGTCAGTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFPEEEGATLLLLAVTLRYGKKI*VVSVKF Trigger: GAACTTCACTGACACAACCCATATTTTCTTTCCATA...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTTACAAAGGGAAAAGTTaGCCAGTTATGGAAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FISHNCSQGGRSPHAMRGYKGKS*PVMERK Trigger: TTTTCTTTCCATAACTGGCCAACTTTTCCCTTTGTA...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGAAGTTTACACGTGTTGTaGACTTCTCTGTATCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGSLHVL*TSLYHS Trigger: TGAATGATACAGAGAAGTCCACAACACGTGTAAACT...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGCTAAGTAGCTGGCTTTaGTACAAAGGGAAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLLSSWL*YKGKSW Trigger: CCAACTTTTCCCTTTGTACCAAAGCCAGCTACTTAG...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CCA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGAGTGGAAGAATCATATaGGCTGATTATTCCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLSGRII*ADYSPP Trigger: AGGTGGGGAATAATCAGCCCATATGATTCTTCCACT...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| 3UTR CAA 72 bp | AAGAGATTATTTCATCTAGAGAGACATCACAGATACTaGATAAGGGAAAAGCTAAAGCTAGAGAAAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRLFHLERHHRY*IREKLKLEKRS Trigger: AGACCTTTTCTCTAGCTTTAGCTTTTCCCTTATCAAGTATCTGTGATGTCTCTCTAGATGAAATAATCTCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS TCA 90 bp | ATGACGGTGAGCCCCAGTTCTCCGCGCAGCTGCCCAGGAGCGAAGTaGGACCGGGTCGGAGAGGCGGGAATAGAGATGTCTGAGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: MTVSPSSPRSCPGAK*DRVGEAGIEMSERR Trigger: GCGCCGCTCAGACATCTCTATTCCCGCCTCTCCGACCCGGTCTCACTTCGCTCCTGGGCAGCTGCGCGGAGAACTGGGGCTCACCGTCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS GCA 90 bp | GACGTATCCAGGCCTGCAGTGGTACAGATAGTGTGGATGAGGCACTaGAAGACAACGTCTGATGTGTCCACAGGGCCATGTCGTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DVSRPAVVQIVWMRH*KTTSDVSTGPCREG Trigger: GCCTTCACGACATGGCCCTGTGGACACATCAGACGTTGTCTTGCAGTGCCTCATCCACACTATCTGTACCACTGCAGGCCTGGATACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CCA 90 bp | AGACAACGTCTGATGTGTCCACAGGGCCATGTCGTGAAGGCCATGTaGACGCTGTTGGTGGTGTTTCTTCGTTCCCTTGTGGACTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: RQRLMCPQGHVVKAM*TLLVVFLRSLVDFS Trigger: ACTAAAGTCCACAAGGGAACGAAGAAACACCACCAACAGCGTCCACATGGCCTTCACGACATGGCCCTGTGGACACATCAGACGTTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CCA 90 bp | CATGAAAACCATGACGTATCCAGGCCTGCAGTGGTACAGATAGTGTaGATGAGGCACTGCAAGACAACGTCTGATGTGTCCACAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HENHDVSRPAVVQIV*MRHCKTTSDVSTGP Trigger: TGGCCCTGTGGACACATCAGACGTTGTCTTGCAGTGCCTCATCCACACTATCTGTACCACTGCAGGCCTGGATACGTCATGGTTTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTCTGGCTGCAAGGGGGTaGATGGAATGTCTTTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FISHNCSQGGRSPHAMRGLAARG*MECLFS Trigger: GCTAAAAAGACATTCCATCAACCCCCTTGCAGCCAG...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CAA 90 bp | ATACTTAGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGGAGGGTGCCACCCTGTaGCTCCTGGCTGTAACACTC | + |
|
Preference number: 5 (lower is better) Translates to: ILRGYSIYTPHSHLLLHLEGATL*LLAVTL Trigger: GAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTC...CAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCTAAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGTTACTCCATTTACACTCCCCACTCCCACCTCTTACTCCACTTGACTGGATTCCAAGTCCAAGTGTaGGGCAGAGGAGGAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGYSIYTPHSHLLLHLTGFQVQV*GRGGRG Trigger: TCCTCTTCCTCCTCTGCCCAACACTTGGACTTGGAA...TCCAGTCAAGTGGAGTAAGAGGTGGGAGTGGGGAGTGTAAATGGAGTAACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CAA 90 bp | TGGACTATCCACAAGGCAGTGCAAAGAGGTGTGTGTTTCCCTGAAGAAGAGGGTCACCTCTTACTCCACTaGACTGGACTATCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WTIHKAVQRGVCFPEEEGHLLLH*TGLSTR Trigger: CCTTGTGGATAGTCCAGTCAAGTGGAGTAAGAGGTG...ACCCTCTTCTTCAGGGAAACACACACCTCTTTGCACTGCCTTGTGGATAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CAA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGATGCAAATGTGCCATTaGCTTCTGATAGAGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLVTTAHREGGHHMPCGMQMCH*LLIEHP Trigger: TGGATGCTCTATCAGAAGCAAATGGCACATTTGCAT...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGTCTAGCTGTTTTATCGTaGCTTGGTAGAATTTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FISHNCSQGGRSPHAMRGLAVLS*LGRICH Trigger: GTGGCAAATTCTACCAAGCAACGATAAAACAGCTAG...ACCCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CAA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGAGGAGTTTACACGTGTaGTGGACTTCTCTGTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLLVTTAHREGGHHMPCGRSLHV*WTSLYH Trigger: ATGATACAGAGAAGTCCACAACACGTGTAAACTCCT...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGAGTACAAAGGGAAAAGTaGGCCAGTTATGGAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CFPEEEGATLLLLAVTLRVQREK*ASYGKK Trigger: TTTCTTTCCATAACTGGCCAACTTTTCCCTTTGTAC...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CAA 90 bp | AGTTTATTAGTCACAACTGCTCACAGGGAGGGAGGTCACCACATGCCATGCGGGGAAAAGGTCTACGAGTaGGCAATATTTCCAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLLVTTAHREGGHHMPCGEKVYE*AIFPKK Trigger: TTTCTTTGGAAATATTGCCAACTCGTAGACCTTTTC...CCCGCATGGCATGTGGTGACCTCCCTCCCTGTGAGCAGTTGTGACTAATAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTCCCTGAAGAAGAGGGTGCCACCCTGTTGCTCCTGGCTGTAACACTCAGAAGACATCACAGATACTaGATAAGGGAAAAGCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CFPEEEGATLLLLAVTLRRHHRY*IREKLK Trigger: CTTTAGCTTTTCCCTTATCAAGTATCTGTGATGTCT...TCTGAGTGTTACAGCCAGGAGCAACAGGGTGGCACCCTCTTCTTCAGGGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS GCA 90 bp | GTTGTAAACACAGATATCCCATGTAGGAAACACAGTGCGTGCAGGTaGAAAGAGGCACAAGATAGCACCATGAAAACCATGACGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVNTDIPCRKHSACR*KEAQDSTMKTMTYP Trigger: TGGATACGTCATGGTTTTCATGGTGCTATCTTGTGCCTCTTTGCACCTGCACGCACTGTGTTTCCTACATGGGATATCTGTGTTTACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS GCA 90 bp | AGTTTGGTTGTAAACACAGATATCCCATGTAGGAAACACAGTGCGTaGAGGTGCAAAGAGGCACAAGATAGCACCATGAAAACCATGACG | + |
|
Preference number: 5 (lower is better) Translates to: SLVVNTDIPCRKHSA*RCKEAQDSTMKTMT Trigger: CGTCATGGTTTTCATGGTGCTATCTTGTGCCTCTTTGCACCTGCACGCACTGTGTTTCCTACATGGGATATCTGTGTTTACAACCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS TCA 72 bp | AGCCCCAGTTCTCCGCGCAGCTGCCCAGGAGCGAAGTaGGACCGGGTCGGAGAGGCGGGAATAGAGATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSSPRSCPGAK*DRVGEAGIEMS Trigger: AGACATCTCTATTCCCGCCTCTCCGACCCGGTCTCACTTCGCTCCTGGGCAGCTGCGCGGAGAACTGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408945.5 |
||
| CDS CCA 72 bp | CTGATGTGTCCACAGGGCCATGTCGTGAAGGCCATGTaGACGCTGTTGGTGGTGTTTCTTCGTTCCCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LMCPQGHVVKAM*TLLVVFLRSLV Trigger: CACAAGGGAACGAAGAAACACCACCAACAGCGTCCACATGGCCTTCACGACATGGCCCTGTGGACACATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS GCA 72 bp | AGGCCTGCAGTGGTACAGATAGTGTGGATGAGGCACTaGAAGACAACGTCTGATGTGTCCACAGGGCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: RPAVVQIVWMRH*KTTSDVSTGPC Trigger: ACATGGCCCTGTGGACACATCAGACGTTGTCTTGCAGTGCCTCATCCACACTATCTGTACCACTGCAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CCA 72 bp | CATGACGTATCCAGGCCTGCAGTGGTACAGATAGTGTaGATGAGGCACTGCAAGACAACGTCTGATGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HDVSRPAVVQIV*MRHCKTTSDVS Trigger: GGACACATCAGACGTTGTCTTGCAGTGCCTCATCCACACTATCTGTACCACTGCAGGCCTGGATACGTCATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS GCA 72 bp | ACAGATATCCCATGTAGGAAACACAGTGCGTGCAGGTaGAAAGAGGCACAAGATAGCACCATGAAAACCATG | + |
|
Preference number: 6 (lower is better) Translates to: TDIPCRKHSACR*KEAQDSTMKTM Trigger: CATGGTTTTCATGGTGCTATCTTGTGCCTCTTTGCACCTGCACGCACTGTGTTTCCTACATGGGATATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CAA 72 bp | CCATGTGGACGCTGTTGGTGGTGTTTCTTCGTTCCCTaGTGGACTTTAGTTTTATCAGCAACCCAGGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PCGRCWWCFFVP*WTLVLSATQEF Trigger: AAACTCCTGGGTTGCTGATAAAACTAAAGTCCACAAGGGAACGAAGAAACACCACCAACAGCGTCCACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS GCA 72 bp | GTAAACACAGATATCCCATGTAGGAAACACAGTGCGTaGAGGTGCAAAGAGGCACAAGATAGCACCATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VNTDIPCRKHSA*RCKEAQDSTMK Trigger: TTTCATGGTGCTATCTTGTGCCTCTTTGCACCTGCACGCACTGTGTTTCCTACATGGGATATCTGTGTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CCA 72 bp | TGTGGACGCTGTTGGTGGTGTTTCTTCGTTCCCTTGTaGACTTTAGTTTTATCAGCAACCCAGGAGTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: CGRCWWCFFVPL*TLVLSATQEFT Trigger: TGTAAACTCCTGGGTTGCTGATAAAACTAAAGTCCACAAGGGAACGAAGAAACACCACCAACAGCGTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CAA 72 bp | GCTCTGCCAGTTGAAAATGCCAAGGTCACTTCCCCATaGTGCATCAATTTCTCCTTGTTGGTCAGAACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALPVENAKVTSP*CINFSLLVRTR Trigger: TCTAGTTCTGACCAACAAGGAGAAATTGATGCACAATGGGGAAGTGACCTTGGCATTTTCAACTGGCAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CAA 90 bp | TGGTTTGAAGTCCTTTACAAAGGATATAATTTGGCCCCTGGGAGTTaGGTTGTAAACACAGATATCCCATGTAGGAAACACAGTGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: WFEVLYKGYNLAPGS*VVNTDIPCRKHSAC Trigger: GCACGCACTGTGTTTCCTACATGGGATATCTGTGTTTACAACCAAACTCCCAGGGGCCAAATTATATCCTTTGTAAAGGACTTCAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CAA 72 bp | GCCTGGTGGTTTGAAGTCCTTTACAAAGGATATAATTaGGCCCCTGGGAGTTTGGTTGTAAACACAGATATC | + |
|
Preference number: 6 (lower is better) Translates to: AWWFEVLYKGYN*APGSLVVNTDI Trigger: GATATCTGTGTTTACAACCAAACTCCCAGGGGCCAAATTATATCCTTTGTAAAGGACTTCAAACCACCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CCA 72 bp | TTGTTTTCCTCCGTGAAACTTCCAGCAAATGCCTGGTaGTTTGAAGTCCTTTACAAAGGATATAATTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFSSVKLPANAW*FEVLYKGYNLA Trigger: GGCCAAATTATATCCTTTGTAAAGGACTTCAAACCACCAGGCATTTGCTGGAAGTTTCACGGAGGAAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CAA 72 bp | GTCCTTTACAAAGGATATAATTTGGCCCCTGGGAGTTaGGTTGTAAACACAGATATCCCATGTAGGAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: VLYKGYNLAPGS*VVNTDIPCRKH Trigger: GTGTTTCCTACATGGGATATCTGTGTTTACAACCAAACTCCCAGGGGCCAAATTATATCCTTTGTAAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||
| CDS CCA 72 bp | TGCTTGTTTTCCTCCGTGAAACTTCCAGCAAATGCCTaGTGGTTTGAAGTCCTTTACAAAGGATATAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLFSSVKLPANA*WFEVLYKGYNL Trigger: CAAATTATATCCTTTGTAAAGGACTTCAAACCACCAGGCATTTGCTGGAAGTTTCACGGAGGAAAACAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498680.1 |
||