RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HMMR (Homo sapiens)

Ensembl gene IDs: ENSG00000072571

Ensembl transcript IDs: ENST00000353866.7, ENST00000358715.3, ENST00000393915.9, ENST00000432118.6, ENST00000517936.1, ENST00000520345.5, ENST00000522094.5

Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGAGATGCATTCTAAGCTaGAAAGCCAGCGAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQRCILS*KASERV
Trigger: AACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCT...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
3UTR-3UTR GCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCTTTAAGTTGATGAGATaGATTCTAAGCTGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLFKLMR*ILSWKA
Trigger: GGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
3UTR-3UTR GCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGTTTAAGTTGATGAGATaGATTCTAAGCTGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQFKLMR*ILSWKA
Trigger: GGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
3UTR-3UTR CAA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTGGGGTTTAGACTCTaGAAACTAAGGTTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDLGFRL*KLRFQN
Trigger: GTTCTGAAACCTTAGTTTCAAGAGTCTAAACCCCAG...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
3UTR-3UTR CAA 90 bp GAGTTTGTTAAGAATGCAGGCTTAAAGGCCAATCCACAGATTATAATTTCATACCTGGGGTTTAGACTCTaGAAACTAAGGTTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: EFVKNAGLKANPQIIISYLGFRL*KLRFQN
Trigger: GTTCTGAAACCTTAGTTTCAAGAGTCTAAACCCCAG...GTATGAAATTATAATCTGTGGATTGGCCTTTAAGCCTGCATTCTTAACAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGTGGATCCGCCTGTCCTaGGCACCACGTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRWIRLS*APRSCR
Trigger: TCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCA...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGCCGGCGTTAGCCAATTaGAAAGCCAAACCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRPALAN*KAKPLG
Trigger: GCCCAGGGGTTTGGCTTTCCAATTGGCTAACGCCGG...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR CCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTTGGATCCGCCTGTCCTaGGCACCACGTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIWIRLS*APRSCR
Trigger: TCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCA...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGTCAGTTTCCAGATCCTaGATCCGCCTGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRSVSRS*IRLSWA
Trigger: TGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGA...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTGGAAAGCCAAACCCCTaGGCACACCAATCCCGCACA +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIGKPNP*AHQSRT
Trigger: TGTGCGGGATTGGTGTGCCCAGGGGTTTGGCTTTCC...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR TCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGGTGGCCTGGGTATaGGCAGCACTACTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIRVAWV*AALLFS
Trigger: GGAGAAAAGTAGTGCTGCTCATACCCAGGCCACCCT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGCTCCTTTGGGTGACCTaGAGCTTCATCTCCATGCCT +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRLLWVT*SFISMP
Trigger: AGGCATGGAGATGAAGCTGCAGGTCACCCAAAGGAG...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGTGGATCCGCCTGTCCTaGGCACCACGTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQWIRLS*APRSCR
Trigger: TCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCA...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTTCAGTTTCCAGATCCTaGATCCGCCTGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSISVSRS*IRLSWA
Trigger: TGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGA...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGTTGCGTCCAATTAGCTaGCCTGCGAGTTTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRLRPIS*PASLGC
Trigger: GCAGCCTAAACTCGCAGGCCAGCTAATTGGACGCAA...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR TCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGAACCAGAAGGGTCATTaGATCGTTTCAAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRNQKGH*IVSRAP
Trigger: AGGCGCCCTTGAAACGATTCAATGACCCTTCTGGTT...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGAGGGTGGCCTGGGTATaGGCAGCACTACTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQRVAWV*AALLFS
Trigger: GGAGAAAAGTAGTGCTGCTCATACCCAGGCCACCCT...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGAGCACCTGGAGATGGTaGACAACCAGAAGGGTCATT +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRSTWRW*TTRRVI
Trigger: AATGACCCTTCTGGTTGTGCACCATCTCCAGGTGCT...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGCTGTCATACTTTTCCTaGAAAAGCAGGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRLSYFS*KSRVAW
Trigger: CCAGGCCACCCTGCTTTTGCAGGAAAAGTATGACAG...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTCCTGCAAAAGCAGGGTaGCCTGGGTATGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTPAKAG*PGYEQH
Trigger: GTGCTGCTCATACCCAGGCCACCCTGCTTTTGCAGG...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGCCTCTTCCAATTGCTTaGCCAGCCTTTCAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRPLPIA*PAFQLV
Trigger: AACAAGCTGAAAGGCTGGTCAAGCAATTGGAAGAGG...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGCTTCCTCCTGTTGCTTaGGTTGGTTCTGCAAATCAG +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRLPPVA*VGSANQ
Trigger: CTGATTTGCAGAACCAACTCAAGCAACAGGAGGAAG...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGGCACTCCTCGACAACTaGATGCGGATTATCACTCCC +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQALLDN*MRIITP
Trigger: GGGAGTGATAATCCGCATTCAGTTGTCGAGGAGTGC...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR GCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCATGCTGGGTTCTGATTaGGTCCAATTAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLMLGSD*VQLAGL
Trigger: CAGGCCAGCTAATTGGACGCAATCAGAACCCAGCAT...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR CCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTATAAGCACCTGGAGATaGTGCACAACCAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIISTWR*CTTRRV
Trigger: GACCCTTCTGGTTGTGCACCATCTCCAGGTGCTTAT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp TTTAAGTTGATGAGATGCATTCTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATCCTGCAAAAGCAGGGTaGCCTGGGTATGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: FKLMRCILSWKASERVQNPAKAG*PGYEQH
Trigger: GTGCTGCTCATACCCAGGCCACCCTGCTTTTGCAGG...ATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGGAAACTGAAGGTGACTaGCACTCCTCGACAACTGAA +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRETEGD*HSSTTE
Trigger: TTCAGTTGTCGAGGAGTGCCAGTCACCTTCAGTTTC...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353866.7
ENST00000393915.9
CDS-3UTR TCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCTGGGCTATTTTCCCTTaGGACTCTTCGAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLWAIFP*DSSRLL
Trigger: AAGGAGTCTCGAAGAGTCTCAAGGGAAAATAGCCCA...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTTACTTCCATGATTCTTaGCACTCCATAGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIYFHDS*HSIGAR
Trigger: CCGAGCTCCTATGGAGTGTCAAGAATCATGGAAGTA...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGCCTCCAGGATCAAGCTaGAGAATCTGGGGTTTAGAC +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQPPGSS*RIWGLD
Trigger: GTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGG...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAAGAATGCTGGGTTCTaGTTGCGTCCAATTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIKNAGF*LRPISW
Trigger: CCAGCTAATTGGACGCAATCAGAACCCAGCATTCTT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGAGCACCTGGAGATGGTaGACAACCAGAAGGGTCATT +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQSTWRW*TTRRVI
Trigger: AATGACCCTTCTGGTTGTGCACCATCTCCAGGTGCT...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTATCTCCATGCCTTCTTaGTTAGCCATCATACCCCTC +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIISMPS*LAIIPL
Trigger: GAGGGGTATGATGGCTAAGCAAGAAGGCATGGAGAT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCATGCTGAACATCCTCTaGATTTTTCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLMLNIL*IFPSLG
Trigger: GCCAAGGCTGGGAAAAATGCAGAGGATGTTCAGCAT...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTCCTGCGAGTTTAGGCTaGCATCCAATAGGAGACCGT +
Preference number: 4 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTPASLG*HPIGDR
Trigger: ACGGTCTCCTATTGGATGGCAGCCTAAACTCGCAGG...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR CCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTGAAACTGAAGGTGACTaGCACTCCTCGACAACTGAA +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIETEGD*HSSTTE
Trigger: TTCAGTTGTCGAGGAGTGCCAGTCACCTTCAGTTTC...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353866.7
ENST00000393915.9
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGCCTCTTCCAATTGCTTaGCCAGCCTTTCAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQPLPIA*PAFQLV
Trigger: AACAAGCTGAAAGGCTGGTCAAGCAATTGGAAGAGG...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGCTTCCTCCTGTTGCTTaGGTTGGTTCTGCAAATCAG +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQLPPVA*VGSANQ
Trigger: CTGATTTGCAGAACCAACTCAAGCAACAGGAGGAAG...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTCTGACAGCGGAGTTTTaGTACTTCCGATTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSILTAEF*YFRFEL
Trigger: CAACTCAAATCGGAAGTATCAAAACTCCGCTGTCAG...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGGCTTCCTCTTCCAATTaGTTGACCAGCCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQASSSN*LTSLSA
Trigger: AGCTGAAAGGCTGGTCAAGCAATTGGAAGAGGAAGC...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGATGCTGAACATCCTCTaGATTTTTCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQMLNIL*IFPSLG
Trigger: GCCAAGGCTGGGAAAAATGCAGAGGATGTTCAGCAT...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAACACGAAGAAAGAATaGTGGGTTCTGATTGCGTCC +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSINTKKE*WVLIAS
Trigger: GGACGCAATCAGAACCCAGCATTCTTTCTTCGTGTT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR CCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAACATCATAAGCACCTaGAGATGGTGCACAACCAGA +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSINIIST*RWCTTR
Trigger: TCTGGTTGTGCACCATCTCCAGGTGCTTATGATGTT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCCCTTTAGTGCTGACTTaGTCTGCAGATCTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLPLVLT*SADLEA
Trigger: TGCTTCTAGATCTGCAGACCAAGTCAGCACTAAAGG...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTCCTTTAGTGCTGACTTaGTCTGCAGATCTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIPLVLT*SADLEA
Trigger: TGCTTCTAGATCTGCAGACCAAGTCAGCACTAAAGG...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCAGATGCATTCTAAGCTaGAAAGCCAGCGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLRCILS*KASERV
Trigger: AACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCT...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp TTTAAGTTGATGAGATGCATTCTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATAACCAGAAGGGTCATTaGATCGTTTCAAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: FKLMRCILSWKASERVQNNQKGH*IVSRAP
Trigger: AGGCGCCCTTGAAACGATTCAATGACCCTTCTGGTT...ATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTCTTAACTTTTCTAGCTaGAGCAGGCAAGGTAGTATC +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSILNFSS*SRQGSI
Trigger: GATACTACCTTGCCTGCTTCAGCTAGAAAAGTTAAG...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTCCTCTTCCAATTGCTTaGCCAGCCTTTCAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTPLPIA*PAFQLV
Trigger: AACAAGCTGAAAGGCTGGTCAAGCAATTGGAAGAGG...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGCTGACAGCGGAGTTTTaGTACTTCCGATTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQLTAEF*YFRFEL
Trigger: CAACTCAAATCGGAAGTATCAAAACTCCGCTGTCAG...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp TTTAAGTTGATGAGATGCATTCTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATCCTCCAGGATCAAGCTaGAGAATCTGGGGTTTAGAC +
Preference number: 4 (lower is better)
Translates to: FKLMRCILSWKASERVQNPPGSS*RIWGLD
Trigger: GTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGG...ATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCTTTGGGTGACCTaGAGCTTCATCTCCATGCCT +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDLLWVT*SFISMP
Trigger: AGGCATGGAGATGAAGCTGCAGGTCACCCAAAGGAG...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTTCCTCGACAACTGAATaGGGATTATCACTCCCTACC +
Preference number: 4 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTSSTTE*GLSLPT
Trigger: GGTAGGGAGTGATAATCCGCATTCAGTTGTCGAGGA...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR CCA 90 bp TTTAAGTTGATGAGATGCATTCTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATATAAGCACCTGGAGATaGTGCACAACCAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: FKLMRCILSWKASERVQNISTWR*CTTRRV
Trigger: GACCCTTCTGGTTGTGCACCATCTCCAGGTGCTTAT...ATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGCCTGCAAAAGCAGGGTaGCCTGGGTATGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMPAKAG*PGYEQH
Trigger: GTGCTGCTCATACCCAGGCCACCCTGCTTTTGCAGG...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGCTTTTCTTTCTCTATTaGAACAAGTTTTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRLFFLY*NKFSLQ
Trigger: CTGGAGGGAAAACTTGTTTCAATAGAGAAAGAAAAG...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCATCCTTACATATTCTTaGTTTGAGCTCTCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLILTYS*FELSVA
Trigger: GGCAACTGAGAGCTCAAATCAAGAATATGTAAGGAT...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp TTTAAGTTGATGAGATGCATTCTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATTACTTCCATGATTCTTaGCACTCCATAGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: FKLMRCILSWKASERVQNYFHDS*HSIGAR
Trigger: CCGAGCTCCTATGGAGTGTCAAGAATCATGGAAGTA...ATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTATAGGTAGGACCAAGTaGGCATTATCAGAATCAAAG +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIIGRTK*ALSESK
Trigger: CTTTGATTCTGATAATGCTCACTTGGTCCTACCTAT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGAGCTCATCCAGTGTTTaGTTTAATTCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRSSSSV*FNSSSN
Trigger: GTTTGAGGAAGAATTAAAGCAAACACTGGATGAGCT...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTGTCATACTTTTCCTaGAAAAGCAGGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDLSYFS*KSRVAW
Trigger: CCAGGCCACCCTGCTTTTGCAGGAAAAGTATGACAG...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGTGCTGACTTGGTCTaGAGATCTAGAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTSADLV*RSRSIL
Trigger: AAGGATGCTTCTAGATCTGCAGACCAAGTCAGCACT...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGGGTAACAGTTTGTATTaGCTTCTTTTAATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRGNSLY*LLLMGS
Trigger: AGACCCCATTAAAAGAAGGCAATACAAACTGTTACC...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGTTTAAGTTGATGAGATaGATTCTAAGCTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SWKASERVQNEVIKVSIRFKLMR*ILSWKA
Trigger: GGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGTCAGTTTCCAGATCCTaGATCCGCCTGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMSVSRS*IRLSWA
Trigger: TGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGA...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAATCTTTGTGATTTCTaGAAGGATACTGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSINLCDF*KDTGPF
Trigger: GAAAGGACCAGTATCCTTTCAGAAATCACAAAGATT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACTGGGCTATTTTCCCTTaGGACTCTTCGAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDWAIFP*DSSRLL
Trigger: AAGGAGTCTCGAAGAGTCTCAAGGGAAAATAGCCCA...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCCTTTTCTTTCTCTATTaGAACAAGTTTTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLLFFLY*NKFSLQ
Trigger: CTGGAGGGAAAACTTGTTTCAATAGAGAAAGAAAAG...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGATCCTTACATATTCTTaGTTTGAGCTCTCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQILTYS*FELSVA
Trigger: GGCAACTGAGAGCTCAAATCAAGAATATGTAAGGAT...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGAGATGTTTACTTCCATaGTTCTTGACACTCCATAGG +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQRCLLP*FLTLHR
Trigger: CCTATGGAGTGTCAAGAATCATGGAAGTAAACATCT...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCATGTTAATCAAATGCTaGGTAGACATGCAGATGACA +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLMLIKC*VDMQMT
Trigger: TGTCATCTGCATGTCTACTCAGCATTTGATTAACAT...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGCTCCTTTGGGTGACCTaGAGCTTCATCTCCATGCCT +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMLLWVT*SFISMP
Trigger: AGGCATGGAGATGAAGCTGCAGGTCACCCAAAGGAG...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGCTCATCCAGTGTTTaGTTTAATTCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSISSSSV*FNSSSN
Trigger: GTTTGAGGAAGAATTAAAGCAAACACTGGATGAGCT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCAGCTCATCCAGTGTTTaGTTTAATTCTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLSSSSV*FNSSSN
Trigger: GTTTGAGGAAGAATTAAAGCAAACACTGGATGAGCT...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTTTCAGCTCTAGATTTTaGTTCCTCTTCCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSIFSSRF*FLFQLL
Trigger: AAGCAATTGGAAGAGGAAGCAAAATCTAGAGCTGAA...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCACATCTTCAAGGCTTTaGACCATACTGTCATACTTT +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLTSSRL*TILSYF
Trigger: AAAGTATGACAGTATGGTGCAAAGCCTTGAAGATGT...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCTCCTGTTGCTTGAGTTaGTTCTGCAAATCAGTTATT +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLSCCLS*FCKSVI
Trigger: AATAACTGATTTGCAGAACCAACTCAAGCAACAGGA...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTTCCTGTTGCTTGAGTTaGTTCTGCAAATCAGTTATT +
Preference number: 4 (lower is better)
Translates to: LSWKASERVQNEVIKVSISCCLS*FCKSVI
Trigger: AATAACTGATTTGCAGAACCAACTCAAGCAACAGGA...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp GAGTTTGTTAAGAATGCAGGCTTAAAGGCCAATCCACAGATTATAATTTCATACAACCAGAAGGGTCATTaGATCGTTTCAAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: EFVKNAGLKANPQIIISYNQKGH*IVSRAP
Trigger: AGGCGCCCTTGAAACGATTCAATGACCCTTCTGGTT...GTATGAAATTATAATCTGTGGATTGGCCTTTAAGCCTGCATTCTTAACAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTTGTCCTTATTTCTTATTTGAACTGGACAAGTAGAAGGATAATAGGTAGGACCTGGGCTATTTTCCCTTaGGACTCTTCGAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: LVLISYLNWTSRRIIGRTWAIFP*DSSRLL
Trigger: AAGGAGTCTCGAAGAGTCTCAAGGGAAAATAGCCCA...GGTCCTACCTATTATCCTTCTACTTGTCCAGTTCAAATAAGAAATAAGGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTGACAGCGGAGTTTTaGTACTTCCGATTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDLTAEF*YFRFEL
Trigger: CAACTCAAATCGGAAGTATCAAAACTCCGCTGTCAG...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGATGTTTACTTCCATaGTTCTTGACACTCCATAGG +
Preference number: 4 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTRCLLP*FLTLHR
Trigger: CCTATGGAGTGTCAAGAATCATGGAAGTAAACATCT...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp GAGTTTGTTAAGAATGCAGGCTTAAAGGCCAATCCACAGATTATAATTTCATACAGCACCTGGAGATGGTaGACAACCAGAAGGGTCATT +
Preference number: 4 (lower is better)
Translates to: EFVKNAGLKANPQIIISYSTWRW*TTRRVI
Trigger: AATGACCCTTCTGGTTGTGCACCATCTCCAGGTGCT...GTATGAAATTATAATCTGTGGATTGGCCTTTAAGCCTGCATTCTTAACAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTTGTCCTTATTTCTTATTTGAACTGGACAAGTAGAAGGATAATAGGTAGGACCATCTCCATGCCTTCTTaGTTAGCCATCATACCCCTC +
Preference number: 4 (lower is better)
Translates to: LVLISYLNWTSRRIIGRTISMPS*LAIIPL
Trigger: GAGGGGTATGATGGCTAAGCAAGAAGGCATGGAGAT...GGTCCTACCTATTATCCTTCTACTTGTCCAGTTCAAATAAGAAATAAGGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCTTCTCCTCAAGAGACTaGTTAAGGCTTAAAATTTCA +
Preference number: 4 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLFSSRD*LRLKIS
Trigger: TGAAATTTTAAGCCTTAAGCAGTCTCTTGAGGAGAA...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGTTCAGCTCTAGATTTTaGTTCCTCTTCCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQFSSRF*FLFQLL
Trigger: AAGCAATTGGAAGAGGAAGCAAAATCTAGAGCTGAA...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGCTGTCATACTTTTCCTaGAAAAGCAGGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMLSYFS*KSRVAW
Trigger: CCAGGCCACCCTGCTTTTGCAGGAAAAGTATGACAG...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGACATCTTCAAGGCTTTaGACCATACTGTCATACTTT +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQTSSRL*TILSYF
Trigger: AAAGTATGACAGTATGGTGCAAAGCCTTGAAGATGT...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACAGTGCTGACTTGGTCTaGAGATCTAGAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDSADLV*RSRSIL
Trigger: AAGGATGCTTCTAGATCTGCAGACCAAGTCAGCACT...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGATAAGCACCTGGAGATaGTGCACAACCAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMISTWR*CTTRRV
Trigger: GACCCTTCTGGTTGTGCACCATCTCCAGGTGCTTAT...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTTAACTTTTCTAGCTaGAGCAGGCAAGGTAGTATC +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDLNFSS*SRQGSI
Trigger: GATACTACCTTGCCTGCTTCAGCTAGAAAAGTTAAG...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTCTTTTCTTTCTCTATTaGAACAAGTTTTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTLFFLY*NKFSLQ
Trigger: CTGGAGGGAAAACTTGTTTCAATAGAGAAAGAAAAG...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGCTTCCTCCTGTTGCTTaGGTTGGTTCTGCAAATCAG +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMLPPVA*VGSANQ
Trigger: CTGATTTGCAGAACCAACTCAAGCAACAGGAGGAAG...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACTTATTTAGCTGTTCCTaGGCTGCACCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDLFSCS*AAPCSF
Trigger: GAATGAACATGGTGCAGCTCAGGAACAGCTAAATAA...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp GAGTTTGTTAAGAATGCAGGCTTAAAGGCCAATCCACAGATTATAATTTCATACTACTTCCATGATTCTTaGCACTCCATAGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: EFVKNAGLKANPQIIISYYFHDS*HSIGAR
Trigger: CCGAGCTCCTATGGAGTGTCAAGAATCATGGAAGTA...GTATGAAATTATAATCTGTGGATTGGCCTTTAAGCCTGCATTCTTAACAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGTTCTCCTCAAGAGACTaGTTAAGGCTTAAAATTTCA +
Preference number: 4 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQFSSRD*LRLKIS
Trigger: TGAAATTTTAAGCCTTAAGCAGTCTCTTGAGGAGAA...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGATGCTGAACATCCTCTaGATTTTTCCCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMMLNIL*IFPSLG
Trigger: GCCAAGGCTGGGAAAAATGCAGAGGATGTTCAGCAT...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACACGAAGAAAGAATGCTaGGTTCTGATTGCGTCCAAT +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDTKKEC*VLIASN
Trigger: ATTGGACGCAATCAGAACCCAGCATTCTTTCTTCGT...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS-3UTR TCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACATCCTTACATATTCTTaGTTTGAGCTCTCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDILTYS*FELSVA
Trigger: GGCAACTGAGAGCTCAAATCAAGAATATGTAAGGAT...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp TTTAAGTTGATGAGATGCATTCTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATATGTTAATCAAATGCTaGGTAGACATGCAGATGACA +
Preference number: 4 (lower is better)
Translates to: FKLMRCILSWKASERVQNMLIKC*VDMQMT
Trigger: TGTCATCTGCATGTCTACTCAGCATTTGATTAACAT...ATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp GAGTTTGTTAAGAATGCAGGCTTAAAGGCCAATCCACAGATTATAATTTCATACAGTGCTGACTTGGTCTaGAGATCTAGAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: EFVKNAGLKANPQIIISYSADLV*RSRSIL
Trigger: AAGGATGCTTCTAGATCTGCAGACCAAGTCAGCACT...GTATGAAATTATAATCTGTGGATTGGCCTTTAAGCCTGCATTCTTAACAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp GAGTTTGTTAAGAATGCAGGCTTAAAGGCCAATCCACAGATTATAATTTCATACAACATCATAAGCACCTaGAGATGGTGCACAACCAGA +
Preference number: 4 (lower is better)
Translates to: EFVKNAGLKANPQIIISYNIIST*RWCTTR
Trigger: TCTGGTTGTGCACCATCTCCAGGTGCTTATGATGTT...GTATGAAATTATAATCTGTGGATTGGCCTTTAAGCCTGCATTCTTAACAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACAATCTTTGTGATTTCTaGAAGGATACTGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDNLCDF*KDTGPF
Trigger: GAAAGGACCAGTATCCTTTCAGAAATCACAAAGATT...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGTTATTTAGCTGTTCCTaGGCTGCACCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMLFSCS*AAPCSF
Trigger: GAATGAACATGGTGCAGCTCAGGAACAGCTAAATAA...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp CTTGTCCTTATTTCTTATTTGAACTGGACAAGTAGAAGGATAATAGGTAGGACCATAGGTAGGACCAAGTaGGCATTATCAGAATCAAAG +
Preference number: 4 (lower is better)
Translates to: LVLISYLNWTSRRIIGRTIGRTK*ALSESK
Trigger: CTTTGATTCTGATAATGCTCACTTGGTCCTACCTAT...GGTCCTACCTATTATCCTTCTACTTGTCCAGTTCAAATAAGAAATAAGGACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACGGTAACAGTTTGTATTaGCTTCTTTTAATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDGNSLY*LLLMGS
Trigger: AGACCCCATTAAAAGAAGGCAATACAAACTGTTACC...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
3UTR CAA 72 bp GGTTTCTATGAAGTTAGGCTTGTCCTTATTTCTTATTaGAACTGGACAAGTAGAAGGATAATAGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: GFYEVRLVLISY*NWTSRRIIGRT
Trigger: GGTCCTACCTATTATCCTTCTACTTGTCCAGTTCAAATAAGAAATAAGGACAAGCCTAACTTCATAGAAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR TCA 90 bp GAGTTTGTTAAGAATGCAGGCTTAAAGGCCAATCCACAGATTATAATTTCATACAGATGTTTACTTCCATaGTTCTTGACACTCCATAGG +
Preference number: 4 (lower is better)
Translates to: EFVKNAGLKANPQIIISYRCLLP*FLTLHR
Trigger: CCTATGGAGTGTCAAGAATCATGGAAGTAAACATCT...GTATGAAATTATAATCTGTGGATTGGCCTTTAAGCCTGCATTCTTAACAAACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp CTTGTCCTTATTTCTTATTTGAACTGGACAAGTAGAAGGATAATAGGTAGGACCTTTAAGTTGATGAGATaGATTCTAAGCTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LVLISYLNWTSRRIIGRTFKLMR*ILSWKA
Trigger: GGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA...GGTCCTACCTATTATCCTTCTACTTGTCCAGTTCAAATAAGAAATAAGGACAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGTTCAGCTCTAGATTTTaGTTCCTCTTCCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMFSSRF*FLFQLL
Trigger: AAGCAATTGGAAGAGGAAGCAAAATCTAGAGCTGAA...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGACATCTTCAAGGCTTTaGACCATACTGTCATACTTT +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMTSSRL*TILSYF
Trigger: AAAGTATGACAGTATGGTGCAAAGCCTTGAAGATGT...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGGGTAACAGTTTGTATTaGCTTCTTTTAATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMGNSLY*LLLMGS
Trigger: AGACCCCATTAAAAGAAGGCAATACAAACTGTTACC...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR GCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGTTTAAGTTGATGAGATaGATTCTAAGCTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMFKLMR*ILSWKA
Trigger: GGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CCA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGTCCTGTTGCTTGAGTTaGTTCTGCAAATCAGTTATT +
Preference number: 4 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMSCCLS*FCKSVI
Trigger: AATAACTGATTTGCAGAACCAACTCAAGCAACAGGA...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS CCA 90 bp CCTGGAGATGGTGCACAACCTCCGGAGACGTTAGAAAGTGCATTTTaGCGTCACTTAGGGGACGGTGTAGTGAGTTCCGGCTTCACTGGT +
Preference number: 5 (lower is better)
Translates to: PGDGAQPPETLESAF*RHLGDGVVSSGFTG
Trigger: ACCAGTGAAGCCGGAACTCACTACACCGTCCCCTAAGTGACGCCAAAATGCACTTTCTAACGTCTCCGGAGGTTGTGCACCATCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520345.5
CDS GCA 90 bp CCAGCTCCAGAAACTGAAGGTGACTGGCACTCCTCGACAACTGAATaGGGATTATCACTCCCTACCGGTTTCAAATTCAAATCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: PAPETEGDWHSSTTE*GLSLPTGFKFKSPH
Trigger: GTGGGGAGATTTGAATTTGAAACCGGTAGGGAGTGATAATCCGCATTCAGTTGTCGAGGAGTGCCAGTCACCTTCAGTTTCTGGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS CCA 90 bp TCCATCTTTTCCAACTCAGTTTCCAGATCCTGGATCCGCCTGTCCTaGGCACCACGTTCCTGTAGAAGAACACGAATCAGAAGGGTCATT +
Preference number: 5 (lower is better)
Translates to: SIFSNSVSRSWIRLS*APRSCRRTRIRRVI
Trigger: AATGACCCTTCTGATTCGTGTTCTTCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGAGTTGGAAAAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432118.6
CDS-3UTR CAA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTCCCGGCGTTAGCCAATaGGAAAGCCAAACCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTPGVSQ*ESQTPG
Trigger: CCCAGGGGTTTGGCTTTCCAATTGGCTAACGCCGGG...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS CCA 90 bp TCCATCTTTTCCAACTCAGTTTCCAGATCCTGGATCCGCCTGTCCTaGGCACCACGTTCCTGTAGAAGAACACGAATCTTTGATTCCGAA +
Preference number: 5 (lower is better)
Translates to: SIFSNSVSRSWIRLS*APRSCRRTRIFDSE
Trigger: TTCGGAATCAAAGATTCGTGTTCTTCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGAGTTGGAAAAGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000517936.1
ENST00000520345.5
ENST00000522094.5
CDS-3UTR CAA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGTTAGGAAAGGACATGTaGACGGCCAGCTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: SWKASERVQNEVIKVSIRLGKDM*TASSRN
Trigger: GTTTCTGGAGCTGGCCGTCAACATGTCCTTTCCTAA...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCCAACCAGAAGGGTCATaGAATCGTTTCAAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLQPEGS*NRFKGA
Trigger: GGCGCCCTTGAAACGATTCAATGACCCTTCTGGTTG...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS CCA 90 bp TCCATCTTTTCCAACTCAGTTTCCAGATCCTGGATCCGCCTGTCCTaGGCACCACGTTCCTGTAGAAGAACACGAATCTCTTTCTCTAAT +
Preference number: 5 (lower is better)
Translates to: SIFSNSVSRSWIRLS*APRSCRRTRISFSN
Trigger: ATTAGAGAAAGAGATTCGTGTTCTTCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGAGTTGGAAAAGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGCAACCAGAAGGGTCATaGAATCGTTTCAAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQQPEGS*NRFKGA
Trigger: GGCGCCCTTGAAACGATTCAATGACCCTTCTGGTTG...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTCATCTCCATGCCTTCTaGCTTAGCCATCATACCCCT +
Preference number: 5 (lower is better)
Translates to: LSWKASERVQNEVIKVSIHLHAF*LSHHTP
Trigger: AGGGGTATGATGGCTAAGCAAGAAGGCATGGAGATG...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCCATCTCCATGCCTTCTaGCTTAGCCATCATACCCCT +
Preference number: 5 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLHLHAF*LSHHTP
Trigger: AGGGGTATGATGGCTAAGCAAGAAGGCATGGAGATG...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGTCCTCTTCCAATTGCTaGACCAGCCTTTCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: SWKASERVQNEVIKVSIRSSSNC*TSLSAC
Trigger: ACAAGCTGAAAGGCTGGTCAAGCAATTGGAAGAGGA...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGTCCTTTAGTGCTGACTaGGTCTGCAGATCTAGAAGC +
Preference number: 5 (lower is better)
Translates to: SWKASERVQNEVIKVSIRSFSAD*VCRSRS
Trigger: GCTTCTAGATCTGCAGACCAAGTCAGCACTAAAGGA...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS TCA 90 bp TTCTCTATTGAAACAAGTTTTCCCTCCAGTTGGGCTATTTTCCCTTaGGACTCTTCGAGACTCCTTTGGGTGACCTGCAGCTTCATCTCC +
Preference number: 5 (lower is better)
Translates to: FSIETSFPSSWAIFP*DSSRLLWVTCSFIS
Trigger: GGAGATGAAGCTGCAGGTCACCCAAAGGAGTCTCGAAGAGTCTCAAGGGAAAATAGCCCAACTGGAGGGAAAACTTGTTTCAATAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGCATCTCCATGCCTTCTaGCTTAGCCATCATACCCCT +
Preference number: 5 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQHLHAF*LSHHTP
Trigger: AGGGGTATGATGGCTAAGCAAGAAGGCATGGAGATG...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTCTCTTCGAGACTCCTTaGGGTGACCTGCAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTLFETP*GDLQLH
Trigger: ATGAAGCTGCAGGTCACCCAAAGGAGTCTCGAAGAG...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGAAGTTTTCCCTCCAGTaGGGCTATTTTCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: SWKASERVQNEVIKVSIRKFSLQ*GYFPLR
Trigger: TCTCAAGGGAAAATAGCCCAACTGGAGGGAAAACTT...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTTCCTTTAGTGCTGACTaGGTCTGCAGATCTAGAAGC +
Preference number: 5 (lower is better)
Translates to: LSWKASERVQNEVIKVSISFSAD*VCRSRS
Trigger: GCTTCTAGATCTGCAGACCAAGTCAGCACTAAAGGA...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCTCCTTTAGTGCTGACTaGGTCTGCAGATCTAGAAGC +
Preference number: 5 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLSFSAD*VCRSRS
Trigger: GCTTCTAGATCTGCAGACCAAGTCAGCACTAAAGGA...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTGTGCAGCATTTAGCCTaGCTTCCATCTTTTCCAACT +
Preference number: 5 (lower is better)
Translates to: LSWKASERVQNEVIKVSIVQHLA*LPSFPT
Trigger: AGTTGGAAAAGATGGAAGCAAGGCTAAATGCTGCAC...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp TTTAAGTTGATGAGATGCATTCTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATCTCTTCGAGACTCCTTaGGGTGACCTGCAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: FKLMRCILSWKASERVQNLFETP*GDLQLH
Trigger: ATGAAGCTGCAGGTCACCCAAAGGAGTCTCGAAGAG...ATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGTTGGGCTATTTTCCCTaGAGACTCTTCGAGACTCCT +
Preference number: 5 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQLGYFP*RLFETP
Trigger: AGGAGTCTCGAAGAGTCTCAAGGGAAAATAGCCCAA...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAAGTTTTCCCTCCAGTaGGGCTATTTTCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: LSWKASERVQNEVIKVSIKFSLQ*GYFPLR
Trigger: TCTCAAGGGAAAATAGCCCAACTGGAGGGAAAACTT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGGCATTTTTCCCAGCCTaGGCCGCTTTTTCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQAFFPA*AAFSCN
Trigger: ATTACAGGAAAAAGCGGCCAAGGCTGGGAAAAATGC...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCTCTTCCTCCTGTTGCTaGAGTTGGTTCTGCAAATCA +
Preference number: 5 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLSSSCC*SWFCKS
Trigger: TGATTTGCAGAACCAACTCAAGCAACAGGAGGAAGA...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGCTGGGGTTTAGACTCTaGAAACTAAGGTTTCAGAAC +
Preference number: 5 (lower is better)
Translates to: SWKASERVQNEVIKVSIRLGFRL*KLRFQN
Trigger: GTTCTGAAACCTTAGTTTCAAGAGTCTAAACCCCAG...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTGCATTTTTCCCAGCCTaGGCCGCTTTTTCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTAFFPA*AAFSCN
Trigger: ATTACAGGAAAAAGCGGCCAAGGCTGGGAAAAATGC...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGGAGCTCGGTAACAGTTaGTATTGCCTTCTTTTAATG +
Preference number: 5 (lower is better)
Translates to: SWKASERVQNEVIKVSIRELGNS*YCLLLM
Trigger: CATTAAAAGAAGGCAATACAAACTGTTACCGAGCTC...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTTGTCCTTATTTCTTATTTGAACTGGACAAGTAGAAGGATAATAGGTAGGACCCTCTTCGAGACTCCTTaGGGTGACCTGCAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LVLISYLNWTSRRIIGRTLFETP*GDLQLH
Trigger: ATGAAGCTGCAGGTCACCCAAAGGAGTCTCGAAGAG...GGTCCTACCTATTATCCTTCTACTTGTCCAGTTCAAATAAGAAATAAGGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp TTTAAGTTGATGAGATGCATTCTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATTTGGGCTATTTTCCCTaGAGACTCTTCGAGACTCCT +
Preference number: 5 (lower is better)
Translates to: FKLMRCILSWKASERVQNLGYFP*RLFETP
Trigger: AGGAGTCTCGAAGAGTCTCAAGGGAAAATAGCCCAA...ATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAGAATGCATCTCATCAACTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAAGTTTTCCCTCCAGTaGGGCTATTTTCCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTKFSLQ*GYFPLR
Trigger: TCTCAAGGGAAAATAGCCCAACTGGAGGGAAAACTT...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAGGCTTTTCACGTTCCTGTaGTTCAAGAATAAACTTCTG +
Preference number: 5 (lower is better)
Translates to: SWKASERVQNEVIKVSIRLFTFL*FKNKLL
Trigger: CAGAAGTTTATTCTTGAACAACAGGAACGTGAAAAG...CCTAATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTCAGACTAGAAAAGACCTCCAGGATCAAGCTGAAGAATCTGGGGTTTAGACTCAACATCTTCAAGGCTTaGCACCATACTGTCATACTT +
Preference number: 5 (lower is better)
Translates to: LRLEKTSRIKLKNLGFRLNIFKA*HHTVIL
Trigger: AAGTATGACAGTATGGTGCAAAGCCTTGAAGATGTT...GAGTCTAAACCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTAAGCTGGAAAGCCAGCGAAAGGGTTCAGAATGAGGTGATAAAGGTGAGCATTAACATCTTCAAGGCTTaGCACCATACTGTCATACTT +
Preference number: 5 (lower is better)
Translates to: LSWKASERVQNEVIKVSINIFKA*HHTVIL
Trigger: AAGTATGACAGTATGGTGCAAAGCCTTGAAGATGTT...AATGCTCACCTTTATCACCTCATTCTGAACCCTTTCGCTGGCTTTCCAGCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTTCTTCCTCCTGTTGCTaGAGTTGGTTCTGCAAATCA +
Preference number: 5 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTSSSCC*SWFCKS
Trigger: TGATTTGCAGAACCAACTCAAGCAACAGGAGGAAGA...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAAAGTCTTCCTCCTGTaGCTTGAGTTGGTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTKVFLL*LELVLQ
Trigger: TTGCAGAACCAACTCAAGCAACAGGAGGAAGACTTT...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGCTGGGGTTTAGACTCTaGAAACTAAGGTTTCAGAAC +
Preference number: 5 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQLGFRL*KLRFQN
Trigger: GTTCTGAAACCTTAGTTTCAAGAGTCTAAACCCCAG...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTTGTCCTTATTTCTTATTTGAACTGGACAAGTAGAAGGATAATAGGTAGGACCTTAGGAAAGGACATGTaGACGGCCAGCTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: LVLISYLNWTSRRIIGRTLGKDM*TASSRN
Trigger: GTTTCTGGAGCTGGCCGTCAACATGTCCTTTCCTAA...GGTCCTACCTATTATCCTTCTACTTGTCCAGTTCAAATAAGAAATAAGGACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACTTGGGCTATTTTCCCTaGAGACTCTTCGAGACTCCT +
Preference number: 5 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDLGYFP*RLFETP
Trigger: AGGAGTCTCGAAGAGTCTCAAGGGAAAATAGCCCAA...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACTCCTCTTCCAATTGCTaGACCAGCCTTTCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDSSSNC*TSLSAC
Trigger: ACAAGCTGAAAGGCTGGTCAAGCAATTGGAAGAGGA...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACGCATTTTTCCCAGCCTaGGCCGCTTTTTCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDAFFPA*AAFSCN
Trigger: ATTACAGGAAAAAGCGGCCAAGGCTGGGAAAAATGC...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACCTCCAGCTTTTCACGTTCCTGTaGTTCAAGAATAAACTTCTG +
Preference number: 5 (lower is better)
Translates to: KPRCFSLAKEAQTRKDLQLFTFL*FKNKLL
Trigger: CAGAAGTTTATTCTTGAACAACAGGAACGTGAAAAG...CTGGAGGTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AGTAGAGGCAATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAACATCTTCAAGGCTTaGCACCATACTGTCATACTT +
Preference number: 5 (lower is better)
Translates to: SRGNNKPRCFSLAKEAQTNIFKA*HHTVIL
Trigger: AAGTATGACAGTATGGTGCAAAGCCTTGAAGATGTT...AGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATTGCCTCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACAAAGTCTTCCTCCTGTaGCTTGAGTTGGTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDKVFLL*LELVLQ
Trigger: TTGCAGAACCAACTCAAGCAACAGGAGGAAGACTTT...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGTCCTCTTCCAATTGCTaGACCAGCCTTTCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMSSSNC*TSLSAC
Trigger: ACAAGCTGAAAGGCTGGTCAAGCAATTGGAAGAGGA...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS TCA 90 bp ACGAATGAAATAATCTTCAACAGGTTTCTCAGATGTTTACTTCCATaGTTCTTGACACTCCATAGGAGCTCGGTAACAGTTTGTATTGCC +
Preference number: 5 (lower is better)
Translates to: TNEIIFNRFLRCLLP*FLTLHRSSVTVCIA
Trigger: GGCAATACAAACTGTTACCGAGCTCCTATGGAGTGTCAAGAATCATGGAAGTAAACATCTGAGAAACCTGTTGAAGATTATTTCATTCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
CDS-3UTR CAA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGTCTTCCTCCTGTTGCTaGAGTTGGTTCTGCAAATCA +
Preference number: 5 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMSSSCC*SWFCKS
Trigger: TGATTTGCAGAACCAACTCAAGCAACAGGAGGAAGA...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGAAAGTCTTCCTCCTGTaGCTTGAGTTGGTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMKVFLL*LELVLQ
Trigger: TTGCAGAACCAACTCAAGCAACAGGAGGAAGACTTT...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp AATAACAAGCCAAGGTGTTTTAGCCTAGCTAAAGAAGCTCAGACTAGAAAAGACGAGCTCGGTAACAGTTaGTATTGCCTTCTTTTAATG +
Preference number: 5 (lower is better)
Translates to: NNKPRCFSLAKEAQTRKDELGNS*YCLLLM
Trigger: CATTAAAAGAAGGCAATACAAACTGTTACCGAGCTC...GTCTTTTCTAGTCTGAGCTTCTTTAGCTAGGCTAAAACACCTTGGCTTGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
CDS-3UTR CAA 90 bp CTTGTCCTTATTTCTTATTTGAACTGGACAAGTAGAAGGATAATAGGTAGGACCGAGCTCGGTAACAGTTaGTATTGCCTTCTTTTAATG +
Preference number: 5 (lower is better)
Translates to: LVLISYLNWTSRRIIGRTELGNS*YCLLLM
Trigger: CATTAAAAGAAGGCAATACAAACTGTTACCGAGCTC...GGTCCTACCTATTATCCTTCTACTTGTCCAGTTCAAATAAGAAATAAGGACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS GCA 90 bp GCTTGTTCCTCCTTTTGCTGTAATTTATCAAGCTCATCCAGTGTTTaGTTTAATTCTTCCTCAAACAGATTCTTCTCTTTAACCATTTCC +
Preference number: 5 (lower is better)
Translates to: ACSSFCCNLSSSSSV*FNSSSNRFFSLTIS
Trigger: GGAAATGGTTAAAGAGAAGAATCTGTTTGAGGAAGAATTAAAGCAAACACTGGATGAGCTTGATAAATTACAGCAAAAGGAGGAACAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
CDS-3UTR CAA 90 bp TACACAAATGTTAATCAAATGCTGAGTAGACATGCAGATGACAAGCAGTATATGCTTTTCACGTTCCTGTaGTTCAAGAATAAACTTCTG +
Preference number: 5 (lower is better)
Translates to: YTNVNQMLSRHADDKQYMLFTFL*FKNKLL
Trigger: CAGAAGTTTATTCTTGAACAACAGGAACGTGAAAAG...CATATACTGCTTGTCATCTGCATGTCTACTCAGCATTTGATTAACATTTGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS CCA 72 bp GGTGCACAACCTCCGGAGACGTTAGAAAGTGCATTTTaGCGTCACTTAGGGGACGGTGTAGTGAGTTCCGGC +
Preference number: 6 (lower is better)
Translates to: GAQPPETLESAF*RHLGDGVVSSG
Trigger: GCCGGAACTCACTACACCGTCCCCTAAGTGACGCCAAAATGCACTTTCTAACGTCTCCGGAGGTTGTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520345.5
CDS CAA 90 bp ACCTGGAGATGGTGCACAACCTCCGGAGACGTTAGAAAGTGCATTTaGGCGTCACTTAGGGGACGGTGTAGTGAGTTCCGGCTTCACTGG +
Preference number: 6 (lower is better)
Translates to: TWRWCTTSGDVRKCI*ASLRGRCSEFRLHW
Trigger: CCAGTGAAGCCGGAACTCACTACACCGTCCCCTAAGTGACGCCAAAATGCACTTTCTAACGTCTCCGGAGGTTGTGCACCATCTCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520345.5
CDS CAA 72 bp TGGTGCACAACCTCCGGAGACGTTAGAAAGTGCATTTaGGCGTCACTTAGGGGACGGTGTAGTGAGTTCCGG +
Preference number: 6 (lower is better)
Translates to: WCTTSGDVRKCI*ASLRGRCSEFR
Trigger: CCGGAACTCACTACACCGTCCCCTAAGTGACGCCAAAATGCACTTTCTAACGTCTCCGGAGGTTGTGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520345.5
CDS GCA 72 bp TGGAGATGGTGCACAACCTCCGGAGACGTTAGAAAGTaGATTTTGGCGTCACTTAGGGGACGGTGTAGTGAG +
Preference number: 6 (lower is better)
Translates to: WRWCTTSGDVRK*ILASLRGRCSE
Trigger: CTCACTACACCGTCCCCTAAGTGACGCCAAAATGCACTTTCTAACGTCTCCGGAGGTTGTGCACCATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520345.5
CDS CCA 72 bp TCCAACTCAGTTTCCAGATCCTGGATCCGCCTGTCCTaGGCACCACGTTCCTGTAGAAGAACACGAATCTCT +
Preference number: 6 (lower is better)
Translates to: SNSVSRSWIRLS*APRSCRRTRIS
Trigger: AGAGATTCGTGTTCTTCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGAGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358715.3
ENST00000393915.9
CDS CCA 72 bp CTTGCTTCCATCTTTTCCAACTCAGTTTCCAGATCCTaGATCCGCCTGTCCTGGGCACCACGTTCCTGTAGA +
Preference number: 6 (lower is better)
Translates to: LASIFSNSVSRS*IRLSWAPRSCR
Trigger: TCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGAGTTGGAAAAGATGGAAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
ENST00000517936.1
ENST00000520345.5
ENST00000522094.5
CDS CCA 72 bp TCCAACTCAGTTTCCAGATCCTGGATCCGCCTGTCCTaGGCACCACGTTCCTGTAGAAGAACACGAATCAGA +
Preference number: 6 (lower is better)
Translates to: SNSVSRSWIRLS*APRSCRRTRIR
Trigger: TCTGATTCGTGTTCTTCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGAGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432118.6
CDS CCA 72 bp TCCAACTCAGTTTCCAGATCCTGGATCCGCCTGTCCTaGGCACCACGTTCCTGTAGAAGAACACGAATCTTT +
Preference number: 6 (lower is better)
Translates to: SNSVSRSWIRLS*APRSCRRTRIF
Trigger: AAAGATTCGTGTTCTTCTACAGGAACGTGGTGCCCAGGACAGGCGGATCCAGGATCTGGAAACTGAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000517936.1
ENST00000520345.5
ENST00000522094.5
CDS TCA 72 bp GAAACAAGTTTTCCCTCCAGTTGGGCTATTTTCCCTTaGGACTCTTCGAGACTCCTTTGGGTGACCTGCAGC +
Preference number: 6 (lower is better)
Translates to: ETSFPSSWAIFP*DSSRLLWVTCS
Trigger: GCTGCAGGTCACCCAAAGGAGTCTCGAAGAGTCTCAAGGGAAAATAGCCCAACTGGAGGGAAAACTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
CDS CAA 72 bp TTGGGCTATTTTCCCTTGAGACTCTTCGAGACTCCTTaGGGTGACCTGCAGCTTCATCTCCATGCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: LGYFPLRLFETP*GDLQLHLHAFL
Trigger: CAAGAAGGCATGGAGATGAAGCTGCAGGTCACCCAAAGGAGTCTCGAAGAGTCTCAAGGGAAAATAGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
ENST00000520345.5
CDS GCA 72 bp CTTTGGGTGACCTGCAGCTTCATCTCCATGCCTTCTTaGTTAGCCATCATACCCCTCATCTTTGTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: LWVTCSFISMPS*LAIIPLIFVSL
Trigger: AAGAGAAACAAAGATGAGGGGTATGATGGCTAAGCAAGAAGGCATGGAGATGAAGCTGCAGGTCACCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
ENST00000520345.5
ENST00000522094.5
CDS CAA 90 bp GACGGTGTAGTGAGTTCCGGCTTCACTGGTTCCAATTCTGTCCCATaGTTCGTTGCATGTGAACTTTTCTGGATTTCAGTTCTTTCATCC +
Preference number: 6 (lower is better)
Translates to: DGVVSSGFTGSNSVP*FVACELFWISVLSS
Trigger: GGATGAAAGAACTGAAATCCAGAAAAGTTCACATGCAACGAACAATGGGACAGAATTGGAACCAGTGAAGCCGGAACTCACTACACCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520345.5
CDS GCA 72 bp GAAACTGAAGGTGACTGGCACTCCTCGACAACTGAATaGGGATTATCACTCCCTACCGGTTTCAAATTCAAA +
Preference number: 6 (lower is better)
Translates to: ETEGDWHSSTTE*GLSLPTGFKFK
Trigger: TTTGAATTTGAAACCGGTAGGGAGTGATAATCCGCATTCAGTTGTCGAGGAGTGCCAGTCACCTTCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353866.7
CDS CAA 72 bp TCTTCAGCTCTAGATTTTGCTTCCTCTTCCAATTGCTaGACCAGCCTTTCAGCTTGTTCCTCCTTTTGCTGT +
Preference number: 6 (lower is better)
Translates to: SSALDFASSSNC*TSLSACSSFCC
Trigger: ACAGCAAAAGGAGGAACAAGCTGAAAGGCTGGTCAAGCAATTGGAAGAGGAAGCAAAATCTAGAGCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
CDS GCA 72 bp AATTCTTCAGCTCTAGATTTTGCTTCCTCTTCCAATTaGTTGACCAGCCTTTCAGCTTGTTCCTCCTTTTGC +
Preference number: 6 (lower is better)
Translates to: NSSALDFASSSN*LTSLSACSSFC
Trigger: GCAAAAGGAGGAACAAGCTGAAAGGCTGGTCAAGCAATTGGAAGAGGAAGCAAAATCTAGAGCTGAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
CDS CAA 90 bp GCAGATCTAGAAGCATCCTTACATATTCTTGATTTGAGCTCTCAGTaGCCAAAATCTGATGCTGAACATCCTCTGCATTTTTCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: ADLEASLHILDLSSQ*PKSDAEHPLHFSQP
Trigger: AGGCTGGGAAAAATGCAGAGGATGTTCAGCATCAGATTTTGGCAACTGAGAGCTCAAATCAAGAATATGTAAGGATGCTTCTAGATCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
CDS TCA 72 bp ATAATCTTCAACAGGTTTCTCAGATGTTTACTTCCATaGTTCTTGACACTCCATAGGAGCTCGGTAACAGTT +
Preference number: 6 (lower is better)
Translates to: IIFNRFLRCLLP*FLTLHRSSVTV
Trigger: AACTGTTACCGAGCTCCTATGGAGTGTCAAGAATCATGGAAGTAAACATCTGAGAAACCTGTTGAAGATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6
CDS CAA 72 bp ATAGCTTTCAAATTGAGCAGTAACATCTTCAAGGCTTaGCACCATACTGTCATACTTTTCCTGCAAAAGCAG +
Preference number: 6 (lower is better)
Translates to: IAFKLSSNIFKA*HHTVILFLQKQ
Trigger: CTGCTTTTGCAGGAAAAGTATGACAGTATGGTGCAAAGCCTTGAAGATGTTACTGCTCAATTTGAAAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353866.7
ENST00000358715.3
ENST00000393915.9
ENST00000432118.6