RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HMGXB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000100281

Ensembl transcript IDs: ENST00000216106.6, ENST00000418170.5, ENST00000420166.5, ENST00000455359.5, ENST00000464480.1, ENST00000466438.1, ENST00000498325.5

Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTATGCCCATCTGTGTGGAGGCCAGGAAGTGGCAGGGGAGGTGCTaGTGCTCCAGCGTATGGGATGCTGGGAGGAGGGCCAGATGTCAC +
Preference number: 1 (lower is better)
Translates to: TMPICVEARKWQGRC*CSSVWDAGRRARCH
Trigger: GTGACATCTGGCCCTCCTCCCAGCATCCCATACGCTGGAGCAGCAGCACCTCCCCTGCCACTTCCTGGCCTCCACACAGATGGGCATAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR GCA 90 bp TTCACTATGCCCATCTGTGTGGAGGCCAGGAAGTGGCAGGGGAGGTaGTGCTGCTCCAGCGTATGGGATGCTGGGAGGAGGGCCAGATGT +
Preference number: 1 (lower is better)
Translates to: FTMPICVEARKWQGR*CCSSVWDAGRRARC
Trigger: ACATCTGGCCCTCCTCCCAGCATCCCATACGCTGGAGCAGCAGCACCTCCCCTGCCACTTCCTGGCCTCCACACAGATGGGCATAGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CCA 90 bp TCAAGCCCTGAAAGATCAAGGTTAGCACTGTGGGACTCTGCGAACTaGGAGGCGTCAGACCCACAGCCTTCAGGGCCAGGAGATGAATGT +
Preference number: 1 (lower is better)
Translates to: SSPERSRLALWDSAN*EASDPQPSGPGDEC
Trigger: ACATTCATCTCCTGGCCCTGAAGGCTGTGGGTCTGACGCCTCCCAGTTCGCAGAGTCCCACAGTGCTAACCTTGATCTTTCAGGGCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CCA 90 bp GGCTTAGGGACTCTCCCAACAGCTGAAGATGAGCAGCAACATCAATaGGCTCTGTCTCAGGGGCTTTGGCTGGTGAGGCTGGTAACAGCA +
Preference number: 1 (lower is better)
Translates to: GLGTLPTAEDEQQHQ*ALSQGLWLVRLVTA
Trigger: TGCTGTTACCAGCCTCACCAGCCAAAGCCCCTGAGACAGAGCCCATTGATGTTGCTGCTCATCTTCAGCTGTTGGGAGAGTCCCTAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CCA 90 bp TCTACCAGAATAGGTTCAAGCCCTGAAAGATCAAGGTTAGCACTGTaGGACTCTGCGAACTGGGAGGCGTCAGACCCACAGCCTTCAGGG +
Preference number: 1 (lower is better)
Translates to: STRIGSSPERSRLAL*DSANWEASDPQPSG
Trigger: CCCTGAAGGCTGTGGGTCTGACGCCTCCCAGTTCGCAGAGTCCCACAGTGCTAACCTTGATCTTTCAGGGCTTGAACCTATTCTGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 90 bp CAGACACAGCCACCATACCCTCAGTTTCCTGCAGACGGTGTCCAATaGGGCTTAGGGACTCTCCCAACAGCTGAAGATGAGCAGCAACAT +
Preference number: 1 (lower is better)
Translates to: QTQPPYPQFPADGVQ*GLGTLPTAEDEQQH
Trigger: ATGTTGCTGCTCATCTTCAGCTGTTGGGAGAGTCCCTAAGCCTCATTGGACACCGTCTGCAGGAAACTGAGGGTATGGTGGCTGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 90 bp ACATGCCAAGGGGCCAAGGGCACAGATAATGGAATCCAGAAGCACTaGCAAACTGCCAGACACAGCCACCATACCCTCAGTTTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: TCQGAKGTDNGIQKH*QTARHSHHTLSFLQ
Trigger: CTGCAGGAAACTGAGGGTATGGTGGCTGTGTCTGGCAGTTTGTCAGTGCTTCTGGATTCCATTATCTGTGCCCTTGGCCCCTTGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CCA 90 bp GCTGGTGAGGCTGGTAACAGCATGGTGGTGGGTGGGGACTTCTTCTaGGGTGACAGTACTCCTACAGAAGAGGCTTTGACTTTCATGGAA +
Preference number: 1 (lower is better)
Translates to: AGEAGNSMVVGGDFF*GDSTPTEEALTFME
Trigger: TTCCATGAAAGTCAAAGCCTCTTCTGTAGGAGTACTGTCACCCCAGAAGAAGTCCCCACCCACCACCATGCTGTTACCAGCCTCACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 90 bp AACAGGGAAGGAAGGAAGGAAAGAAGGGAGGGCGGAAGGGAGAAATaGCAAATCTGTATCTTCCACATGCTGTTGCTGGTGGAGGCTTCT +
Preference number: 1 (lower is better)
Translates to: NREGRKERREGGREK*QICIFHMLLLVEAS
Trigger: AGAAGCCTCCACCAGCAACAGCATGTGGAAGATACAGATTTGTCATTTCTCCCTTCCGCCCTCCCTTCTTTCCTTCCTTCCTTCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR GCA 90 bp CAGCCTTCAGGGCCAGGAGATGAATGTGCGTCTGAGGATGACTTGTaGTTTTTCCGGGCTGTTTTCAGAAAGCTCTGTAACTCATGTCCT +
Preference number: 1 (lower is better)
Translates to: QPSGPGDECASEDDL*FFRAVFRKLCNSCP
Trigger: AGGACATGAGTTACAGAGCTTTCTGAAAACAGCCCGGAAAAAGCACAAGTCATCCTCAGACGCACATTCATCTCCTGGCCCTGAAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 90 bp GAATGCAGAACACTGTGTATCTGCCCACCAGGGGAACTGATAAGATaGACCCAAAAATCATGCTGGGCAAAGTTTATCCATAACCACCGA +
Preference number: 1 (lower is better)
Translates to: ECRTLCICPPGELIR*TQKSCWAKFIHNHR
Trigger: TCGGTGGTTATGGATAAACTTTGCCCAGCATGATTTTTGGGTTCATCTTATCAGTTCCCCTGGTGGGCAGATACACAGTGTTCTGCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR TCA 90 bp GACGAAATATCTGGTGTATCACAAATGCAGACTGTTCTTCTATGCTaGATCCTCCAAAATACCAGCCCTCCACCTCTCTCCTCCTTCACA +
Preference number: 1 (lower is better)
Translates to: DEISGVSQMQTVLLC*ILQNTSPPPLSSFT
Trigger: TGTGAAGGAGGAGAGAGGTGGAGGGCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGTCTGCATTTGTGATACACCAGATATTTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 90 bp GATAAGGTTTCTGTCCCAGGATTCTTTGCTGTCACAGTCCCGGCATaGTGTAAGCAATGTTGTCTAATGTGTTTGACAAGACCTGTTTGG +
Preference number: 1 (lower is better)
Translates to: DKVSVPGFFAVTVPA*CKQCCLMCLTRPVW
Trigger: CCAAACAGGTCTTGTCAAACACATTAGACAACATTGCTTACATCATGCCGGGACTGTGACAGCAAAGAATCCTGGGACAGAAACCTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CCA 90 bp GCCACTGAAGGAATCTGCAACAGTCATATATACACAAACCAGCAATaGTGTAGGATAAGGTTTCTGTCCCAGGATTCTTTGCTGTCACAG +
Preference number: 1 (lower is better)
Translates to: ATEGICNSHIYTNQQ*CRIRFLSQDSLLSQ
Trigger: CTGTGACAGCAAAGAATCCTGGGACAGAAACCTTATCCTACACCATTGCTGGTTTGTGTATATATGACTGTTGCAGATTCCTTCAGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 90 bp CCTGTTTCTCTGTATTCCCAATTAAATCTTAAAACTGCTCTGAGCTaGGAAAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCC +
Preference number: 1 (lower is better)
Translates to: PVSLYSQLNLKTALS*ERDSAARLPLSNIA
Trigger: GGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTTTCTCAGCTCAGAGCAGTTTTAAGATTTAATTGGGAATACAGAGAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR TCA 90 bp GCCTCTGTTGAGGCCACCAATGGTACCAATGATTACAATAAATTTTaGGACACAGACACCTATACAGTAGGAATTGGAATGAACCCTCTA +
Preference number: 1 (lower is better)
Translates to: ASVEATNGTNDYNKF*DTDTYTVGIGMNPL
Trigger: TAGAGGGTTCATTCCAATTCCTACTGTATAGGTGTCTGTGTCTCAAAATTTATTGTAATCATTGGTACCATTGGTGGCCTCAACAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR TCA 90 bp AGCTGTATCAGTAGACTGTGGGCTGGACTTTTTCTTTTTCTTCTGTaGCGATTCCAAAGACGAAATATCTGGTGTATCACAAATGCAGAC +
Preference number: 1 (lower is better)
Translates to: SCISRLWAGLFLFLL*RFQRRNIWCITNAD
Trigger: GTCTGCATTTGTGATACACCAGATATTTCGTCTTTGGAATCGTCACAGAAGAAAAAGAAAAAGTCCAGCCCACAGTCTACTGATACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR GCA 90 bp GAAAGTCCTAAACTTCTCTTGGACTTGGAGTGTCGCTTCTCTTTATaGTTCTCCTTGTCTTTCTTCTTTTTGCTCTTCTTTGACTTCTTT +
Preference number: 1 (lower is better)
Translates to: ESPKLLLDLECRFSL*FSLSFFFLLFFDFF
Trigger: AAAGAAGTCAAAGAAGAGCAAAAAGAAGAAAGACAAGGAGAAGCATAAAGAGAAGCGACACTCCAAGTCCAAGAGAAGTTTAGGACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 90 bp AAATTTTATCACCTCCCACCTAGGTCACTTCAAATTGAAAGGCTTTaGATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTAC +
Preference number: 1 (lower is better)
Translates to: KFYHLPPRSLQIERL*IFSQLASSRYLSYY
Trigger: GTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTTTCAATTTGAAGTGACCTAGGTGGGAGGTGATAAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CCA 90 bp ATACCCTGTGTCAAACAGGAAACTTCCACAGATACAGAAGAGGCATaGTACAATGTTCTAACACATGAAATCAAGTTAAGATTTCTGTTC +
Preference number: 1 (lower is better)
Translates to: IPCVKQETSTDTEEA*YNVLTHEIKLRFLF
Trigger: GAACAGAAATCTTAACTTGATTTCATGTGTTAGAACATTGTACCATGCCTCTTCTGTATCTGTGGAAGTTTCCTGTTTGACACAGGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR TCA 90 bp AACTTCCACAGATACAGAAGAGGCATGGTACAATGTTCTAACACATaGAATCAAGTTAAGATTTCTGTTCCTCTTGATTTTGGTTCTCAA +
Preference number: 1 (lower is better)
Translates to: NFHRYRRGMVQCSNT*NQVKISVPLDFGSQ
Trigger: TTGAGAACCAAAATCAAGAGGAACAGAAATCTTAACTTGATTTCATGTGTTAGAACATTGTACCATGCCTCTTCTGTATCTGTGGAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACCCCCACTGCTTCCACTaGCTTTCTTCCTGTGGTGCT +
Preference number: 2 (lower is better)
Translates to: GQSLSITTEQLSSTACEDPHCFH*LSSCGA
Trigger: AGCACCACAGGAAGAAAGTCAGTGGAAGCAGTGGGG...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACGCAGACGGTGTCCAATaGGGCTTAGGGACTCTCCCA +
Preference number: 2 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNADGVQ*GLGTLP
Trigger: TGGGAGAGTCCCTAAGCCTCATTGGACACCGTCTGC...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR TCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGAACAGCCAGAGGCCACTaGAGGAATCTGCAACAGTCA +
Preference number: 2 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRTARGH*RNLQQS
Trigger: TGACTGTTGCAGATTCCTTCAGTGGCCTCTGGCTGT...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAATGGCAGGGGAGGTGCTaGTGCTCCAGCGTATGGGAT +
Preference number: 2 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKWQGRC*CSSVWD
Trigger: ATCCCATACGCTGGAGCAGCAGCACCTCCCCTGCCA...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp AACTCCCCAGCCTCTAGTTCCCCACCAGAGGATGAGTCTGATTCTACCAGAATAGCTCACAGAACTCCTTaGCCTCTGTTGAGGCCACCA +
Preference number: 2 (lower is better)
Translates to: NSPASSSPPEDESDSTRIAHRTP*PLLRPP
Trigger: TGGTGGCCTCAACAGAGGCCAAGGAGTTCTGTGAGC...TATTCTGGTAGAATCAGACTCATCCTCTGGTGGGGAACTAGAGGCTGGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp TCAGGTAGTTGTGTGGTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAACGGCTTGTGAGGACTTaGTGGCTAACTTCATGCTGC +
Preference number: 2 (lower is better)
Translates to: SGSCVVRHAKGPRAQIMERLVRT*WLTSCC
Trigger: GCAGCATGAAGTTAGCCACCAAGTCCTCACAAGCCG...TTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACAAGGCAAATGGTCAGTaGTGGGTCTGGAGGTCCAAC +
Preference number: 2 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNKANGQ*WVWRSN
Trigger: GTTGGACCTCCAGACCCATCACTGACCATTTGCCTT...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACAAAACTGCTCTGAGCTaGGAAAGGGATTCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: GQSLSITTEQLSSTACEDKTALS*ERDSAA
Trigger: GGCTGCTGAATCCCTTTCTCAGCTCAGAGCAGTTTT...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp TGGGAGGCGTCAGACCCACAGCCTTCAGGGCCAGGAGATGAATGTGCGTCTGAGTCCCTTCTCCTTTGGTaGCAGAATAAGTTTCATTTT +
Preference number: 2 (lower is better)
Translates to: WEASDPQPSGPGDECASESLLLW*QNKFHF
Trigger: AAAATGAAACTTATTCTGTCACCAAAGGAGAAGGGA...CTCAGACGCACATTCATCTCCTGGCCCTGAAGGCTGTGGGTCTGACGCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR GCA 90 bp GTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAATCCAGAAGCACTGACTCTGTATCTTCCACATaGTGTTGCTGGTGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: VRHAKGPRAQIMESRSTDSVSST*CCWWRL
Trigger: AAGCCTCCACCAGCAACAGCATGTGGAAGATACAGA...GTCAGTGCTTCTGGATTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR GCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAAGGAGGGCTTGGAGCCTaGTGCCAGTGGGGAAGTGAT +
Preference number: 2 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLEGGLGA*CQWGSD
Trigger: ATCACTTCCCCACTGGCAGCAGGCTCCAAGCCCTCC...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGCGGCTTGTGAGGACTTaGTGGCTAACTTCATGCTGC +
Preference number: 2 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQERLVRT*WLTSCC
Trigger: GCAGCATGAAGTTAGCCACCAAGTCCTCACAAGCCG...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGTCTCCCCAGTCTTTTTaGAGGGCTTGGAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: SFWNRPGGRKERGKETGKSPQSF*RAWSLL
Trigger: CAGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGAGA...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACTATGCCCATCTGTGTaGAGGCCAGGAAGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKLCPSV*RPGSGR
Trigger: CCTGCCACTTCCTGGCCTCCACACAGATGGGCATAG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CAA 90 bp CCACAGCCTTCAGGGCCAGGAGATGAATGTGCGTCTGAGGATGACTaGTGCTTTTTCCGGGCTGTTTTCAGAAAGCTCTGTAACTCATGT +
Preference number: 2 (lower is better)
Translates to: PQPSGPGDECASEDD*CFFRAVFRKLCNSC
Trigger: ACATGAGTTACAGAGCTTTCTGAAAACAGCCCGGAAAAAGCACAAGTCATCCTCAGACGCACATTCATCTCCTGGCCCTGAAGGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR TCA 90 bp GTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAATCCAGAAGCACTGACACTTCATGCTGCCAGTaGAAGACACCAGCACTTAAT +
Preference number: 2 (lower is better)
Translates to: VRHAKGPRAQIMESRSTDTSCCQ*KTPALN
Trigger: ATTAAGTGCTGGTGTCTTTCACTGGCAGCATGAAGT...GTCAGTGCTTCTGGATTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR GCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTCTGTATCTTCCACATaGTGTTGCTGGTGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: GQSLSITTEQLSSTACEDSVSST*CCWWRL
Trigger: AAGCCTCCACCAGCAACAGCATGTGGAAGATACAGA...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp TCAGGTAGTTGTGTGGTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAACTACAGAAGAGGCTTTaGCTTTCATGGAACCTTCTG +
Preference number: 2 (lower is better)
Translates to: SGSCVVRHAKGPRAQIMELQKRL*LSWNLL
Trigger: CAGAAGGTTCCATGAAAGTCAAAGCCTCTTCTGTAG...TTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR GCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGAGGAGTAAAGCACCCTaGTCATCCCGAGCTGATTTC +
Preference number: 2 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLRSKAP*SSRADF
Trigger: GAAATCAGCTCGGGATGAGCAGGGTGCTTTACTCCT...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp TCAGGTAGTTGTGTGGTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAATTAGCTCAGAATGTATaGAGGTCCAACTGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: SGSCVVRHAKGPRAQIMELAQNV*RSNWWH
Trigger: ATGCCACCAGTTGGACCTCCATACATTCTGAGCTAA...TTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGAGTCCTAAACTTCTCTTaGACTTGGAGTGTCGCTTCT +
Preference number: 2 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRVLNFS*TWSVAS
Trigger: AGAAGCGACACTCCAAGTCCAAGAGAAGTTTAGGAC...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACGATGGTCAGCCACAATaGTCACGCGATACTCTTTAC +
Preference number: 2 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNDGQPQ*SRDTLY
Trigger: GTAAAGAGTATCGCGTGACCATTGTGGCTGACCATC...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGAGGCTGGTAACAGCATaGTGGTGGGTGGGGACTTCT +
Preference number: 2 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWRLVTA*WWVGTS
Trigger: AGAAGTCCCCACCCACCACCATGCTGTTACCAGCCT...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR TCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAAACAGCCAGAGGCCACTaGAGGAATCTGCAACAGTCA +
Preference number: 2 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLETARGH*RNLQQS
Trigger: TGACTGTTGCAGATTCCTTCAGTGGCCTCTGGCTGT...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACGGGGAACTGATAAGATaGACCCAAAAATCATGCTGG +
Preference number: 2 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNGELIR*TQKSCW
Trigger: CCAGCATGATTTTTGGGTTCATCTTATCAGTTCCCC...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGACCCAAAGATTTACTTTaGTGCTGTAGTGCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRPKDLL*CCSALS
Trigger: TGACAGAGCACTACAGCATCAAAGTAAATCTTTGGG...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGCTGTCCATAAAGAGATaGGCTTGGCACCCAGAACAA +
Preference number: 2 (lower is better)
Translates to: QSLSITTEQLSSTACEDLLSIKR*AWHPEQ
Trigger: TTGTTCTGGGTGCCAAGCGCATCTCTTTATGGACAG...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGACACTTACATGTGGAATaGAGAACACTGTGTATCTGC +
Preference number: 2 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRHLHVE*RTLCIC
Trigger: GCAGATACACAGTGTTCTGCATTCCACATGTAAGTG...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAATGTCCCAGGATTCTTTaGTGTCACAGTCCCGGCATG +
Preference number: 2 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLECPRIL*CHSPGM
Trigger: CATGCCGGGACTGTGACAGCAAAGAATCCTGGGACA...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAGCTCACAGAACTCCTTaGCCTCTGTTGAGGCCACCA +
Preference number: 2 (lower is better)
Translates to: EESTVNSELGVGRESHTKAHRTP*PLLRPP
Trigger: TGGTGGCCTCAACAGAGGCCAAGGAGTTCTGTGAGC...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAGTAACAGCATGGTGGTaGGTGGGGACTTCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: EESTVNSELGVGRESHTKVTAWW*VGTSSG
Trigger: CCCAGAAGAAGTCCCCACCCACCACCATGCTGTTAC...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR TCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTCTGGAGGTCCAACTaGGCTTGGAAAATAATCACA +
Preference number: 2 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLVWRSN*AWKIIT
Trigger: TGTGATTATTTTCCAAGCTCAGTTGGACCTCCAGAC...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACACTGTTCTTCTATGCTaGATCCTCCAAAATACCAGC +
Preference number: 2 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNTVLLC*ILQNTS
Trigger: GCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGT...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAAGAACACTGTGTATCTaGCCACCAGGGGAACTGATA +
Preference number: 2 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKRTLCI*PPGELI
Trigger: TATCAGTTCCCCTGGTGGGCAGATACACAGTGTTCT...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACAAAACCATCCTGAAGTaGTCAACTGTCTTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: GQSLSITTEQLSSTACEDKTILK*STVFFP
Trigger: TGGAAAGAAGACAGTTGAGCACTTCAGGATGGTTTT...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATAAGTGGCAGGGGAGGTaGTGCTGCTCCAGCGTATGG +
Preference number: 2 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHKWQGR*CCSSVW
Trigger: CCATACGCTGGAGCAGCAGCACCTCCCCTGCCACTT...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR GCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGTCTTTTTCTGGTAATTaGTTCCACACCTCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQESFSGN*FHTSAS
Trigger: ACTGGCTGAGGTGTGGAAGCAATTACCAGAAAAAGA...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACGCCAAAATTTCCTCTTaGCTAAACCTTTGCCATTTC +
Preference number: 2 (lower is better)
Translates to: GQSLSITTEQLSSTACEDAKISS*LNLCHF
Trigger: GAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGC...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGTTAGCTCAGAATGTATaGAGGTCCAACTGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: SFWNRPGGRKERGKETGKLAQNV*RSNWWH
Trigger: ATGCCACCAGTTGGACCTCCATACATTCTGAGCTAA...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp TCAGGTAGTTGTGTGGTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAAACATGCTGTTGCTGGTaGAGGCTTCTGTTATTAAAT +
Preference number: 2 (lower is better)
Translates to: SGSCVVRHAKGPRAQIMETCCCW*RLLLLN
Trigger: ATTTAATAACAGAAGCCTCCACCAGCAACAGCATGT...TTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGTCCACATGCTGTTGCTaGTGGAGGCTTCTGTTATTA +
Preference number: 2 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLSTCCC*WRLLLL
Trigger: TAATAACAGAAGCCTCCACCAGCAACAGCATGTGGA...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AACTCCCCAGCCTCTAGTTCCCCACCAGAGGATGAGTCTGATTCTACCAGAATATTTTTACTCTCCGAATaGCTTGAAGAGCCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: NSPASSSPPEDESDSTRIFLLSE*LEEPED
Trigger: ATCCTCTGGCTCTTCAAGCCATTCGGAGAGTAAAAA...TATTCTGGTAGAATCAGACTCATCCTCTGGTGGGGAACTAGAGGCTGGGGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR GCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACAAAACCATCCTGAAGTaGTCAACTGTCTTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNKTILK*STVFFP
Trigger: TGGAAAGAAGACAGTTGAGCACTTCAGGATGGTTTT...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACACAGTTGTGGCTTCTaGTTTGTTCTGTTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKHSCGF*FVLFVL
Trigger: CAGCACAAACAGAACAAAGCAGAAGCCACAACTGTG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGACTATACAGTAGGAATTaGAATGAACCCTCTACTCAA +
Preference number: 2 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRLYSRN*NEPSTQ
Trigger: TTGAGTAGAGGGTTCATTCCAATTCCTACTGTATAG...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGACATGCTGTTGCTGGTaGAGGCTTCTGTTATTAAAT +
Preference number: 2 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQETCCCW*RLLLLN
Trigger: ATTTAATAACAGAAGCCTCCACCAGCAACAGCATGT...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGACAAAGACGAAATATCTaGTGTATCACAAATGCAGAC +
Preference number: 2 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRQRRNI*CITNAD
Trigger: GTCTGCATTTGTGATACACCAGATATTTCGTCTTTG...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACGCCCCCAAGTTACATTaGTTTTTAAGGCAGATTTAT +
Preference number: 2 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNAPKLH*FLRQIY
Trigger: ATAAATCTGCCTTAAAAATCAATGTAACTTGGGGGC...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAGGCGGAAGGGAGAAATaGCAAATCTGTATCTTCCAC +
Preference number: 2 (lower is better)
Translates to: EESTVNSELGVGRESHTKGGREK*QICIFH
Trigger: GTGGAAGATACAGATTTGTCATTTCTCCCTTCCGCC...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAACTGTCCATAAAGAGATaGGCTTGGCACCCAGAACAA +
Preference number: 2 (lower is better)
Translates to: EESTVNSELGVGRESHTKLSIKR*AWHPEQ
Trigger: TTGTTCTGGGTGCCAAGCGCATCTCTTTATGGACAG...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACATCTGAGGATGACTTGTaGTTTTTCCGGGCTGTTTTC +
Preference number: 2 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTSEDDL*FFRAVF
Trigger: GAAAACAGCCCGGAAAAAGCACAAGTCATCCTCAGA...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGGCCAAAATTTCCTCTTaGCTAAACCTTTGCCATTTC +
Preference number: 2 (lower is better)
Translates to: QSLSITTEQLSSTACEDLAKISS*LNLCHF
Trigger: GAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGC...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGTGGGAAACAAACGTCTaGTTCTCTGGAAATAAGGGC +
Preference number: 2 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWWETNV*FSGNKG
Trigger: GCCCTTATTTCCAGAGAACCAGACGTTTGTTTCCCA...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AACTCCCCAGCCTCTAGTTCCCCACCAGAGGATGAGTCTGATTCTACCAGAATATGTATCAGTAGACTGTaGGCTGGACTTTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: NSPASSSPPEDESDSTRICISRL*AGLFLF
Trigger: AAAAAGAAAAAGTCCAGCCCACAGTCTACTGATACA...TATTCTGGTAGAATCAGACTCATCCTCTGGTGGGGAACTAGAGGCTGGGGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGCTGACTTTCTTCCTGTaGTGCTCCTTTTTACTCTCC +
Preference number: 2 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWLTFFL*CSFLLS
Trigger: GGAGAGTAAAAAGGAGCACCACAGGAAGAAAGTCAG...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGAAATCTATACCTGGATaGTCAGCCACAATGGTCACG +
Preference number: 2 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWKSIPG*SATMVT
Trigger: CGTGACCATTGTGGCTGACCATCCAGGTATAGATTT...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR TCA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGGCCCCCAAGTTACATTaGTTTTTAAGGCAGATTTAT +
Preference number: 2 (lower is better)
Translates to: QSLSITTEQLSSTACEDLAPKLH*FLRQIY
Trigger: ATAAATCTGCCTTAAAAATCAATGTAACTTGGGGGC...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGCAAATTGAAAGGCTTTaGATTTTCAGTCAACTGGCA +
Preference number: 2 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLQIERL*IFSQLA
Trigger: TGCCAGTTGACTGAAAATTCAAAGCCTTTCAATTTG...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAGGGGAACTGATAAGATaGACCCAAAAATCATGCTGG +
Preference number: 2 (lower is better)
Translates to: EESTVNSELGVGRESHTKGELIR*TQKSCW
Trigger: CCAGCATGATTTTTGGGTTCATCTTATCAGTTCCCC...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGTTGTGCTGCAGATACTaGGCTTTTTGCTTCCAAATC +
Preference number: 2 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWLCCRY*AFCFQI
Trigger: GATTTGGAAGCAAAAAGCTCAGTATCTGCAGCACAA...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR GCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAACACTTACATGTGGAATaGAGAACACTGTGTATCTGC +
Preference number: 2 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLEHLHVE*RTLCIC
Trigger: GCAGATACACAGTGTTCTGCATTCCACATGTAAGTG...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTATAAAGAGATGCGCTTaGCACCCAGAACAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTIKRCA*HPEQAP
Trigger: GGGGGCTTGTTCTGGGTGCCAAGCGCATCTCTTTAT...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGACCCAAAAATCATGCTaGGCAAAGTTTATCCATAAC +
Preference number: 2 (lower is better)
Translates to: SFWNRPGGRKERGKETGKTQKSC*AKFIHN
Trigger: GTTATGGATAAACTTTGCCCAGCATGATTTTTGGGT...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACTATACAGTAGGAATTaGAATGAACCCTCTACTCAA +
Preference number: 2 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKLYSRN*NEPSTQ
Trigger: TTGAGTAGAGGGTTCATTCCAATTCCTACTGTATAG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAATGATTCAGAGTTTTTaGAACAGACCAGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: EESTVNSELGVGRESHTKMIQSF*NRPGGR
Trigger: CCTTCCTCCTGGTCTGTTCCAAAAACTCTGAATCAT...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CAA 90 bp GATACTCTTTACAGAACACCTGGTAGGCCGACATGTTCTTCTTTTTaGGCTTTTCTCCTCTCTCTCTCTCTTTGTCCTTCTCTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: DTLYRTPGRPTCSSF*AFLLSLSLCPSLLF
Trigger: AAAAAGAAGAGAAGGACAAAGAGAGAGAGAGAGGAGAAAAGCCAAAAAAGAAGAACATGTCGGCCTACCAGGTGTTCTGTAAAGAGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR GCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTCTTCCACATGCTGTTaGTGGTGGAGGCTTCTGTTA +
Preference number: 2 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHSSTCC*WWRLLL
Trigger: TAACAGAAGCCTCCACCAGCAACAGCATGTGGAAGA...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAAACCCAAAAATCATGCTaGGCAAAGTTTATCCATAAC +
Preference number: 2 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLETQKSC*AKFIHN
Trigger: GTTATGGATAAACTTTGCCCAGCATGATTTTTGGGT...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR TCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAACAAATTGAAAGGCTTTaGATTTTCAGTCAACTGGCA +
Preference number: 2 (lower is better)
Translates to: EESTVNSELGVGRESHTKQIERL*IFSQLA
Trigger: TGCCAGTTGACTGAAAATTCAAAGCCTTTCAATTTG...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATCTCAGAGCTTGGTGTTaGCAGAGAATCTCATACCAA +
Preference number: 2 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHLRAWC*QRISYQ
Trigger: TTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAG...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATCCCAAAATCTATACCTaGATGGTCAGCCACAATGGT +
Preference number: 2 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHPKIYT*MVSHNG
Trigger: ACCATTGTGGCTGACCATCCAGGTATAGATTTTGGG...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CAA 90 bp ATAAAGGGAACAAATTTTATCACCTCCCACCTAGGTCACTTCAAATaGAAAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATC +
Preference number: 2 (lower is better)
Translates to: IKGTNFITSHLGHFK*KGFEFSVNWHLPVI
Trigger: GATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTTTCAATTTGAAGTGACCTAGGTGGGAGGTGATAAAATTTGTTCCCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTCCAAGCCTGTATTCATaGCAAAATTTCCTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTPSLYS*QNFLLA
Trigger: AGCCAAGAGGAAATTTTGGCATGAATACAGGCTTGG...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR GCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATCCAAGCCTGTATTCATaGCAAAATTTCCTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHPSLYS*QNFLLA
Trigger: AGCCAAGAGGAAATTTTGGCATGAATACAGGCTTGG...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CAA 90 bp AAACTTCTCTTGGACTTGGAGTGTCGCTTCTCTTTATGCTTCTCCTaGTCTTTCTTCTTTTTGCTCTTCTTTGACTTCTTTTTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: KLLLDLECRFSLCFS*SFFFLLFFDFFFFL
Trigger: CAAGAAGAAAAAGAAGTCAAAGAAGAGCAAAAAGAAGAAAGACAAGGAGAAGCATAAAGAGAAGCGACACTCCAAGTCCAAGAGAAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATCAATTCACTTACATGTaGAATGCAGAACACTGTGTA +
Preference number: 2 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHQFTYM*NAEHCV
Trigger: TACACAGTGTTCTGCATTCCACATGTAAGTGAATTG...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATGATACAGAAGAGGCATaGTACAATGTTCTAACACAT +
Preference number: 2 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHDTEEA*YNVLTH
Trigger: ATGTGTTAGAACATTGTACCATGCCTCTTCTGTATC...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CCA 72 bp AGGAAGTGGCAGGGGAGGTGCTGCTGCTCCAGCGTATaGGATGCTGGGAGGAGGGCCAGATGTCACTGTGAC +
Preference number: 3 (lower is better)
Translates to: RKWQGRCCCSSV*DAGRRARCHCD
Trigger: GTCACAGTGACATCTGGCCCTCCTCCCAGCATCCCATACGCTGGAGCAGCAGCACCTCCCCTGCCACTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CCA 72 bp GAAAGATCAAGGTTAGCACTGTGGGACTCTGCGAACTaGGAGGCGTCAGACCCACAGCCTTCAGGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: ERSRLALWDSAN*EASDPQPSGPG
Trigger: TCCTGGCCCTGAAGGCTGTGGGTCTGACGCCTCCCAGTTCGCAGAGTCCCACAGTGCTAACCTTGATCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CCA 72 bp GGGCTTTGGCTGGTGAGGCTGGTAACAGCATGGTGGTaGGTGGGGACTTCTTCTGGGGTGACAGTACTCCTA +
Preference number: 3 (lower is better)
Translates to: GLWLVRLVTAWW*VGTSSGVTVLL
Trigger: TAGGAGTACTGTCACCCCAGAAGAAGTCCCCACCCACCACCATGCTGTTACCAGCCTCACCAGCCAAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGGTCTTTTTGGAGGGCTaGGAGCCTGCTGCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQEVFLEG*EPAASG
Trigger: CCCACTGGCAGCAGGCTCCAAGCCCTCCAAAAAGAC...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 72 bp GGGGCCAAGGGCACAGATAATGGAATCCAGAAGCACTaGCAAACTGCCAGACACAGCCACCATACCCTCAGT +
Preference number: 3 (lower is better)
Translates to: GAKGTDNGIQKH*QTARHSHHTLS
Trigger: ACTGAGGGTATGGTGGCTGTGTCTGGCAGTTTGTCAGTGCTTCTGGATTCCATTATCTGTGCCCTTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGTCTGTCTCAGGGGCTTaGGCTGGTGAGGCTGGTAAC +
Preference number: 3 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLSVSGA*AGEAGN
Trigger: GTTACCAGCCTCACCAGCCAAAGCCCCTGAGACAGA...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACCTGTCCCAGGATTCTTaGCTGTCACAGTCCCGGCAT +
Preference number: 3 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNLSQDS*LSQSRH
Trigger: ATGCCGGGACTGTGACAGCAAAGAATCCTGGGACAG...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACCAGTTAACTCAGAGCTaGGTGTTGGCAGAGAATCTC +
Preference number: 3 (lower is better)
Translates to: GQSLSITTEQLSSTACEDQLTQS*VLAENL
Trigger: GAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTG...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CAA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGGCGTCTGAGGATGACTaGTGCTTTTTCCGGGCTGTT +
Preference number: 3 (lower is better)
Translates to: SFWNRPGGRKERGKETGKASEDD*CFFRAV
Trigger: AACAGCCCGGAAAAAGCACAAGTCATCCTCAGACGC...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR GCA 72 bp GGGCCAGGAGATGAATGTGCGTCTGAGGATGACTTGTaGTTTTTCCGGGCTGTTTTCAGAAAGCTCTGTAAC +
Preference number: 3 (lower is better)
Translates to: GPGDECASEDDL*FFRAVFRKLCN
Trigger: GTTACAGAGCTTTCTGAAAACAGCCCGGAAAAAGCACAAGTCATCCTCAGACGCACATTCATCTCCTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CCA 72 bp GGTAGTTCCCCACTGCTTCCACTGACTTTCTTCCTGTaGTGCTCCTTTTTACTCTCCGAATGGCTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: GSSPLLPLTFFL*CSFLLSEWLEE
Trigger: CTCTTCAAGCCATTCGGAGAGTAAAAAGGAGCACCACAGGAAGAAAGTCAGTGGAAGCAGTGGGGAACTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CCA 72 bp CTCCCACTGGCACGGCAGAAAGTCCTAAACTTCTCTTaGACTTGGAGTGTCGCTTCTCTTTATGCTTCTCCT +
Preference number: 3 (lower is better)
Translates to: LPLARQKVLNFS*TWSVASLYASP
Trigger: AGGAGAAGCATAAAGAGAAGCGACACTCCAAGTCCAAGAGAAGTTTAGGACTTTCTGCCGTGCCAGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACACATAAAGAGATGCGCTaGGCACCCAGAACAAGCCCC +
Preference number: 3 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTHKEMR*APRTSP
Trigger: GGGGCTTGTTCTGGGTGCCAAGCGCATCTCTTTATG...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAACGGCTTGTGAGGACTaGGTGGCTAACTTCATGCTG +
Preference number: 3 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKTACED*VANFML
Trigger: CAGCATGAAGTTAGCCACCAAGTCCTCACAAGCCGT...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CAA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGTACTCTCCGAATGGCTaGAAGAGCCAGAGGATTTCT +
Preference number: 3 (lower is better)
Translates to: QSLSITTEQLSSTACEDLYSPNG*KSQRIS
Trigger: AGAAATCCTCTGGCTCTTCAAGCCATTCGGAGAGTA...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp AACTCCCCAGCCTCTAGTTCCCCACCAGAGGATGAGTCTGATTCTACCAGAATATTTCACAGTCGCTTGTaGGGAGGGATATTGAAAAGA +
Preference number: 3 (lower is better)
Translates to: NSPASSSPPEDESDSTRIFHSRL*GGILKR
Trigger: TCTTTTCAATATCCCTCCCAACAAGCGACTGTGAAA...TATTCTGGTAGAATCAGACTCATCCTCTGGTGGGGAACTAGAGGCTGGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp TCAGGTAGTTGTGTGGTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAACAGATACTGAGCTTTTaGCTTCCAAATCAGTTTGTC +
Preference number: 3 (lower is better)
Translates to: SGSCVVRHAKGPRAQIMEQILSF*LPNQFV
Trigger: GACAAACTGATTTGGAAGCAAAAAGCTCAGTATCTG...TTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACTGCCAAAATTTCCTCTaGGCTAAACCTTTGCCATTT +
Preference number: 3 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNCQNFL*AKPLPF
Trigger: AAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCA...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CAA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGAAGCCCCCAAGTTACATaGATTTTTAAGGCAGATTTA +
Preference number: 3 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRSPQVT*IFKADL
Trigger: TAAATCTGCCTTAAAAATCAATGTAACTTGGGGGCT...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR TCA 72 bp TCCTACAGAAGAGGCTTTGACTTTCATGGAACCTTCTaGGCTGGATGCTTTCCTTTTCACAGTTGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: SYRRGFDFHGTF*AGCFPFHSCGF
Trigger: GAAGCCACAACTGTGAAAAGGAAAGCATCCAGCTCAGAAGGTTCCATGAAAGTCAAAGCCTCTTCTGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR-3UTR CAA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAACAGTTAACTCAGAGCTaGGTGTTGGCAGAGAATCTC +
Preference number: 3 (lower is better)
Translates to: EESTVNSELGVGRESHTKQLTQS*VLAENL
Trigger: GAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTG...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR TCA 72 bp ACACTGTGTATCTGCCCACCAGGGGAACTGATAAGATaGACCCAAAAATCATGCTGGGCAAAGTTTATCCAT +
Preference number: 3 (lower is better)
Translates to: TLCICPPGELIR*TQKSCWAKFIH
Trigger: ATGGATAAACTTTGCCCAGCATGATTTTTGGGTTCATCTTATCAGTTCCCCTGGTGGGCAGATACACAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CAA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAAAAACTTCTCTTGGACTaGGAGTGTCGCTTCTCTTTA +
Preference number: 3 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLEKLLLD*ECRFSL
Trigger: TAAAGAGAAGCGACACTCCAAGTCCAAGAGAAGTTT...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 72 bp CACCTCCCACCTAGGTCACTTCAAATTGAAAGGCTTTaGATTTTCAGTCAACTGGCATCTTCCCGTTATCTT +
Preference number: 3 (lower is better)
Translates to: HLPPRSLQIERL*IFSQLASSRYL
Trigger: AAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTTTCAATTTGAAGTGACCTAGGTGGGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR TCA 72 bp CTGTATTCCCAATTAAATCTTAAAACTGCTCTGAGCTaGGAAAGGGATTCAGCAGCCAGACTACCTTTAAGC +
Preference number: 3 (lower is better)
Translates to: LYSQLNLKTALS*ERDSAARLPLS
Trigger: GCTTAAAGGTAGTCTGGCTGCTGAATCCCTTTCTCAGCTCAGAGCAGTTTTAAGATTTAATTGGGAATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CCA 72 bp GGAATCTGCAACAGTCATATATACACAAACCAGCAATaGTGTAGGATAAGGTTTCTGTCCCAGGATTCTTTG +
Preference number: 3 (lower is better)
Translates to: GICNSHIYTNQQ*CRIRFLSQDSL
Trigger: CAAAGAATCCTGGGACAGAAACCTTATCCTACACCATTGCTGGTTTGTGTATATATGACTGTTGCAGATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR-3UTR CAA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACAAGCCCCCAAGTTACATaGATTTTTAAGGCAGATTTA +
Preference number: 3 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTSPQVT*IFKADL
Trigger: TAAATCTGCCTTAAAAATCAATGTAACTTGGGGGCT...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 72 bp GTGGCTTCTGCTTTGTTCTGTTTGTGCTGCAGATACTaGGCTTTTTGCTTCCAAATCAGTTTGTCTTTTTCT +
Preference number: 3 (lower is better)
Translates to: VASALFCLCCRY*AFCFQISLSFS
Trigger: AGAAAAAGACAAACTGATTTGGAAGCAAAAAGCTCAGTATCTGCAGCACAAACAGAACAAAGCAGAAGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR GCA 72 bp GAGAATCTCATACCAAATTTAAAAACCATCCTGAAGTaGTCAACTGTCTTCTTTCCAACTGGGAAACAAACG +
Preference number: 3 (lower is better)
Translates to: ENLIPNLKTILK*STVFFPTGKQT
Trigger: CGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTTCAGGATGGTTTTTAAATTTGGTATGAGATTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR TCA 72 bp TCTTCTTTTTGCTCTTCTTTGACTTCTTTTTCTTCTTaGTTTCTCGGTAAGAATCATCTATCACTAACTCCC +
Preference number: 3 (lower is better)
Translates to: SSFCSSLTSFSS*FLGKNHLSLTP
Trigger: GGGAGTTAGTGATAGATGATTCTTACCGAGAAATCAAGAAGAAAAAGAAGTCAAAGAAGAGCAAAAAGAAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR TCA 72 bp ATGCTTCTCCTTGTCTTTCTTCTTTTTGCTCTTCTTTaGCTTCTTTTTCTTCTTGATTTCTCGGTAAGAATC +
Preference number: 3 (lower is better)
Translates to: MLLLVFLLFALL*LLFLLDFSVRI
Trigger: GATTCTTACCGAGAAATCAAGAAGAAAAAGAAGTCAAAGAAGAGCAAAAAGAAGAAAGACAAGGAGAAGCAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp TGGGAGGCGTCAGACCCACAGCCTTCAGGGCCAGGAGATGAATGTGCGTCTGAGCAGCGTATGGGATGCTaGGAGGAGGGCCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: WEASDPQPSGPGDECASEQRMGC*EEGQMS
Trigger: TGACATCTGGCCCTCCTCCCAGCATCCCATACGCTG...CTCAGACGCACATTCATCTCCTGGCCCTGAAGGCTGTGGGTCTGACGCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp CCAGAGGATTTCTCCCCAGTCTTTTTGGAGGGCTTGGAGCCTGCTGCCAGTGGGGTAACAGCATGGTGGTaGGTGGGGACTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PEDFSPVFLEGLEPAASGVTAWW*VGTSSG
Trigger: CCCAGAAGAAGTCCCCACCCACCACCATGCTGTTAC...CCCACTGGCAGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGAGAAATCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp TCAGGTAGTTGTGTGGTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAATGCTGCTCCAGCGTATaGGATGCTGGGAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGSCVVRHAKGPRAQIMECCSSV*DAGRRA
Trigger: GGCCCTCCTCCCAGCATCCCATACGCTGGAGCAGCA...TTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR GCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGATGGCAGGGGAGGTGCTaGTGCTCCAGCGTATGGGAT +
Preference number: 4 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRWQGRC*CSSVWD
Trigger: ATCCCATACGCTGGAGCAGCAGCACCTCCCCTGCCA...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTGGCAGGGGAGGTGCTaGTGCTCCAGCGTATGGGAT +
Preference number: 4 (lower is better)
Translates to: GQSLSITTEQLSSTACEDWQGRC*CSSVWD
Trigger: ATCCCATACGCTGGAGCAGCAGCACCTCCCCTGCCA...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp TGGGAGGCGTCAGACCCACAGCCTTCAGGGCCAGGAGATGAATGTGCGTCTGAGTCTTCCACATGCTGTTaGTGGTGGAGGCTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: WEASDPQPSGPGDECASESSTCC*WWRLLL
Trigger: TAACAGAAGCCTCCACCAGCAACAGCATGTGGAAGA...CTCAGACGCACATTCATCTCCTGGCCCTGAAGGCTGTGGGTCTGACGCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACTGCTGCTCCAGCGTATaGGATGCTGGGAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNCCSSV*DAGRRA
Trigger: GGCCCTCCTCCCAGCATCCCATACGCTGGAGCAGCA...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACGGAGGGCTTGGAGCCTaGTGCCAGTGGGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNGGLGA*CQWGSD
Trigger: ATCACTTCCCCACTGGCAGCAGGCTCCAAGCCCTCC...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CAA 72 bp ACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTaGGTGGCTAACTTCATGCTGCCAGTGAAAGACACC +
Preference number: 4 (lower is better)
Translates to: TTEQLSSTACED*VANFMLPVKDT
Trigger: GGTGTCTTTCACTGGCAGCATGAAGTTAGCCACCAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAGCACTGTGGGACTCTaGGAACTGGGAGGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQESTVGL*ELGGVR
Trigger: TCTGACGCCTCCCAGTTCGCAGAGTCCCACAGTGCT...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGCAGGGGAGGTGCTGCTaGTCCAGCGTATGGGATGCT +
Preference number: 4 (lower is better)
Translates to: QSLSITTEQLSSTACEDLQGRCC*SSVWDA
Trigger: AGCATCCCATACGCTGGAGCAGCAGCACCTCCCCTG...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CCAGAGGATTTCTCCCCAGTCTTTTTGGAGGGCTTGGAGCCTGCTGCCAGTGGGCTGACTTTCTTCCTGTaGTGCTCCTTTTTACTCTCC +
Preference number: 4 (lower is better)
Translates to: PEDFSPVFLEGLEPAASGLTFFL*CSFLLS
Trigger: GGAGAGTAAAAAGGAGCACCACAGGAAGAAAGTCAG...CCCACTGGCAGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGAGAAATCCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGTGGGACTCTGCGAACTaGGAGGCGTCAGACCCACAG +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKWDSAN*EASDPQ
Trigger: CTGTGGGTCTGACGCCTCCCAGTTCGCAGAGTCCCA...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGCTATGCCCATCTGTGTaGAGGCCAGGAAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQELCPSV*RPGSGR
Trigger: CCTGCCACTTCCTGGCCTCCACACAGATGGGCATAG...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACCCCCACTGCTTCCACTaGCTTTCTTCCTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNPHCFH*LSSCGA
Trigger: AGCACCACAGGAAGAAAGTCAGTGGAAGCAGTGGGG...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp ATCACAAATGCAGACTGTTCTTCTATGCTGAATCCTCCAAAATACCAGCCCTCCGGCCAGATGTCACTGTaGCCTCTCCCACTGGCACGG +
Preference number: 4 (lower is better)
Translates to: ITNADCSSMLNPPKYQPSGQMSL*PLPLAR
Trigger: CCGTGCCAGTGGGAGAGGTCACAGTGACATCTGGCC...GGAGGGCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGTCTGCATTTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACAGCAACATAGCCCTGTaGCAACACTGGTGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQSLSITTEQLSSTACEDSNIAL*QHWWGE
Trigger: TTCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCT...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGTTGTGTGGTGAGACATaGCAAGGGGCCAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQELCGET*QGAKGT
Trigger: TGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAA...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGACATCATAAGCCATGGTaGTCCTGCAGGGCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRHHKPW*SCRAFE
Trigger: CTCAAAGGCCCTGCAGGACCACCATGGCTTATGATG...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TCAGGTAGTTGTGTGGTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAACATCATAAGCCATGGTaGTCCTGCAGGGCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SGSCVVRHAKGPRAQIMEHHKPW*SCRAFE
Trigger: CTCAAAGGCCCTGCAGGACCACCATGGCTTATGATG...TTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGTCTCCCCAGTCTTTTTaGAGGGCTTGGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQESPQSF*RAWSLL
Trigger: CAGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGAGA...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGCTGTCTCAGGGGCTTTaGCTGGTGAGGCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQELSQGL*LVRLVT
Trigger: TGTTACCAGCCTCACCAGCCAAAGCCCCTGAGACAG...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAGGCCAGATGTCACTGTaGCCTCTCCCACTGGCACGG +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKGQMSL*PLPLAR
Trigger: CCGTGCCAGTGGGAGAGGTCACAGTGACATCTGGCC...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGGGAATCCAGAAGCACTaGCAAACTGCCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQEGIQKH*QTARHS
Trigger: GCTGTGTCTGGCAGTTTGTCAGTGCTTCTGGATTCC...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAGCAACATAGCCCTGTaGCAACACTGGTGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQESNIAL*QHWWGE
Trigger: TTCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCT...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGGCTTCGGCCAGCTaGAAGTCCTATGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GQSLSITTEQLSSTACEDLASAS*KSYVLK
Trigger: TTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAA...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGGGGCTTGGAGCCTGCTaGCAGTGGGGAAGTGATAGC +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWGLGAC*QWGSDS
Trigger: GCTATCACTTCCCCACTGGCAGCAGGCTCCAAGCCC...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACAGGAGTAAAGCACCCTaGTCATCCCGAGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: GQSLSITTEQLSSTACEDRSKAP*SSRADF
Trigger: GAAATCAGCTCGGGATGAGCAGGGTGCTTTACTCCT...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAAGCACTGTGGGACTCTaGGAACTGGGAGGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKSTVGL*ELGGVR
Trigger: TCTGACGCCTCCCAGTTCGCAGAGTCCCACAGTGCT...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAAAAGTGGCAGGGGAGGTaGTGCTGCTCCAGCGTATGG +
Preference number: 4 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLEKWQGR*CCSSVW
Trigger: CCATACGCTGGAGCAGCAGCACCTCCCCTGCCACTT...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACAAAGTGGCAGGGGAGGTaGTGCTGCTCCAGCGTATGG +
Preference number: 4 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTKWQGR*CCSSVW
Trigger: CCATACGCTGGAGCAGCAGCACCTCCCCTGCCACTT...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGTGGGACTCTGCGAACTaGGAGGCGTCAGACCCACAG +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWWDSAN*EASDPQ
Trigger: CTGTGGGTCTGACGCCTCCCAGTTCGCAGAGTCCCA...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACTCAAGGTTAGCACTGTaGGACTCTGCGAACTGGGAG +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNSRLAL*DSANWE
Trigger: CTCCCAGTTCGCAGAGTCCCACAGTGCTAACCTTGA...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACAGCGTATGGGATGCTaGGAGGAGGGCCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKQRMGC*EEGQMS
Trigger: TGACATCTGGCCCTCCTCCCAGCATCCCATACGCTG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGAGGCTGGTAACAGCATaGTGGTGGGTGGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKRLVTA*WWVGTS
Trigger: AGAAGTCCCCACCCACCACCATGCTGTTACCAGCCT...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGGCTCACAGAACTCCTTaGCCTCTGTTGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QSLSITTEQLSSTACEDLAHRTP*PLLRPP
Trigger: TGGTGGCCTCAACAGAGGCCAAGGAGTTCTGTGAGC...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGACTCTCCGAATGGCTTaGAGAGCCAGAGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQETLRMA*RARGFL
Trigger: GAGAAATCCTCTGGCTCTTCAAGCCATTCGGAGAGT...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GATAGCTTTCAACAGGTCCATAGCTGTATCAGTAGACTGTGGGCTGGACTTTTTGCAGACGGTGTCCAATaGGGCTTAGGGACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: DSFQQVHSCISRLWAGLFADGVQ*GLGTLP
Trigger: TGGGAGAGTCCCTAAGCCTCATTGGACACCGTCTGC...AAAAAGTCCAGCCCACAGTCTACTGATACAGCTATGGACCTGTTGAAAGCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACGGCGGAAGGGAGAAATaGCAAATCTGTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GQSLSITTEQLSSTACEDGGREK*QICIFH
Trigger: GTGGAAGATACAGATTTGTCATTTCTCCCTTCCGCC...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAAACTGCTCTGAGCTaGGAAAGGGATTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQEKTALS*ERDSAA
Trigger: GGCTGCTGAATCCCTTTCTCAGCTCAGAGCAGTTTT...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGTGTCCCAGGATTCTTTaGTGTCACAGTCCCGGCATG +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKCPRIL*CHSPGM
Trigger: CATGCCGGGACTGTGACAGCAAAGAATCCTGGGACA...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGACTGTCCATAAAGAGATaGGCTTGGCACCCAGAACAA +
Preference number: 4 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRLSIKR*AWHPEQ
Trigger: TTGTTCTGGGTGCCAAGCGCATCTCTTTATGGACAG...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGAAGAACACTGTGTATCTaGCCACCAGGGGAACTGATA +
Preference number: 4 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRRTLCI*PPGELI
Trigger: TATCAGTTCCCCTGGTGGGCAGATACACAGTGTTCT...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACAGAACACTGTGTATCTaGCCACCAGGGGAACTGATA +
Preference number: 4 (lower is better)
Translates to: GQSLSITTEQLSSTACEDRTLCI*PPGELI
Trigger: TATCAGTTCCCCTGGTGGGCAGATACACAGTGTTCT...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAACTATGCCCATCTGTGTaGAGGCCAGGAAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLELCPSV*RPGSGR
Trigger: CCTGCCACTTCCTGGCCTCCACACAGATGGGCATAG...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGGGTGGGGACTTCTTCTaGGGTGACAGTACTCCTACA +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKGGDFF*GDSTPT
Trigger: TGTAGGAGTACTGTCACCCCAGAAGAAGTCCCCACC...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGATAAAGAGATGCGCTTaGCACCCAGAACAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKIKRCA*HPEQAP
Trigger: GGGGGCTTGTTCTGGGTGCCAAGCGCATCTCTTTAT...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACCTTGTGAGGACTTGGTaGCTAACTTCATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNLVRTW*LTSCCQ
Trigger: CTGGCAGCATGAAGTTAGCCACCAAGTCCTCACAAG...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CCAGAGGATTTCTCCCCAGTCTTTTTGGAGGGCTTGGAGCCTGCTGCCAGTGGGCAATTCACTTACATGTaGAATGCAGAACACTGTGTA +
Preference number: 4 (lower is better)
Translates to: PEDFSPVFLEGLEPAASGQFTYM*NAEHCV
Trigger: TACACAGTGTTCTGCATTCCACATGTAAGTGAATTG...CCCACTGGCAGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGAGAAATCCTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CAA 72 bp TCAGGGCCAGGAGATGAATGTGCGTCTGAGGATGACTaGTGCTTTTTCCGGGCTGTTTTCAGAAAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SGPGDECASEDD*CFFRAVFRKLC
Trigger: ACAGAGCTTTCTGAAAACAGCCCGGAAAAAGCACAAGTCATCCTCAGACGCACATTCATCTCCTGGCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp GATAGCTTTCAACAGGTCCATAGCTGTATCAGTAGACTGTGGGCTGGACTTTTTCCCCACTGCTTCCACTaGCTTTCTTCCTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: DSFQQVHSCISRLWAGLFPHCFH*LSSCGA
Trigger: AGCACCACAGGAAGAAAGTCAGTGGAAGCAGTGGGG...AAAAAGTCCAGCCCACAGTCTACTGATACAGCTATGGACCTGTTGAAAGCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp TTACATTTCAGACTAAGACAGGTAAGGCAAATGGTCAGTGATGGGTCTGGAGGTCAGGTAGTTGTGTGGTaGGACATGCCAAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: LHFRLRQVRQMVSDGSGGQVVVW*DMPRGQ
Trigger: TTGGCCCCTTGGCATGTCTCACCACACAACTACCTG...ACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTAGTCTGAAATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGAACTTCATGCTGCCAGTaGAAGACACCAGCACTTAAT +
Preference number: 4 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRTSCCQ*KTPALN
Trigger: ATTAAGTGCTGGTGTCTTTCACTGGCAGCATGAAGT...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAAAGCCATGGTGGTCCTaGAGGGCCTTTGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKKPWWS*RAFENV
Trigger: CACATTCTCAAAGGCCCTGCAGGACCACCATGGCTT...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGAGGAGTAAAGCACCCTaGTCATCCCGAGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: QSLSITTEQLSSTACEDLRSKAP*SSRADF
Trigger: GAAATCAGCTCGGGATGAGCAGGGTGCTTTACTCCT...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGACACAGTTGTGGCTTCTaGTTTGTTCTGTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRHSCGF*FVLFVL
Trigger: CAGCACAAACAGAACAAAGCAGAAGCCACAACTGTG...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGATACCCTCAGTTTCCTaGAGACGGTGTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKIPSVS*RRCPMR
Trigger: CCTCATTGGACACCGTCTGCAGGAAACTGAGGGTAT...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGGTAACAGCATGGTGGTaGGTGGGGACTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWVTAWW*VGTSSG
Trigger: CCCAGAAGAAGTCCCCACCCACCACCATGCTGTTAC...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACTGGTAACAGCATGGTaGTGGGTGGGGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKLVTAW*WVGTSS
Trigger: AGAAGAAGTCCCCACCCACCACCATGCTGTTACCAG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TTACATTTCAGACTAAGACAGGTAAGGCAAATGGTCAGTGATGGGTCTGGAGGTAGGCTGGTAACAGCATaGTGGTGGGTGGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LHFRLRQVRQMVSDGSGGRLVTA*WWVGTS
Trigger: AGAAGTCCCCACCCACCACCATGCTGTTACCAGCCT...ACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTAGTCTGAAATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAAGCTCACAGAACTCCTTaGCCTCTGTTGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLEAHRTP*PLLRPP
Trigger: TGGTGGCCTCAACAGAGGCCAAGGAGTTCTGTGAGC...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGATTAGCTCAGAATGTATaGAGGTCCAACTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRLAQNV*RSNWWH
Trigger: ATGCCACCAGTTGGACCTCCATACATTCTGAGCTAA...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTAGCTCAGAATGTATaGAGGTCCAACTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GQSLSITTEQLSSTACEDLAQNV*RSNWWH
Trigger: ATGCCACCAGTTGGACCTCCATACATTCTGAGCTAA...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGCTTGTGAGGACTTGGTaGCTAACTTCATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLLVRTW*LTSCCQ
Trigger: CTGGCAGCATGAAGTTAGCCACCAAGTCCTCACAAG...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACGGCTTGTGAGGACTTaGTGGCTAACTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKRLVRT*WLTSCC
Trigger: GCAGCATGAAGTTAGCCACCAAGTCCTCACAAGCCG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AACTCCCCAGCCTCTAGTTCCCCACCAGAGGATGAGTCTGATTCTACCAGAATATCTCCTCCTTCACACTaGTTTATCGGCACTCAGAAC +
Preference number: 4 (lower is better)
Translates to: NSPASSSPPEDESDSTRISPPSH*FIGTQN
Trigger: GTTCTGAGTGCCGATAAACCAGTGTGAAGGAGGAGA...TATTCTGGTAGAATCAGACTCATCCTCTGGTGGGGAACTAGAGGCTGGGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACGAAGAATTCCTGACCTaGGCAGCAATTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNEEFLT*AAISSS
Trigger: AGAGGAAGAAATTGCTGCTCAGGTCAGGAATTCTTC...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAACAGGTAGTTGTGTGGTaGGACATGCCAAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKQVVVW*DMPRGQ
Trigger: TTGGCCCCTTGGCATGTCTCACCACACAACTACCTG...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACAAAGGCAAATGGTCAGTaGTGGGTCTGGAGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTKANGQ*WVWRSN
Trigger: GTTGGACCTCCAGACCCATCACTGACCATTTGCCTT...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGGCGGAAGGGAGAAATaGCAAATCTGTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLGGREK*QICIFH
Trigger: GTGGAAGATACAGATTTGTCATTTCTCCCTTCCGCC...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATAGGAGGGCTTGGAGCCTaGTGCCAGTGGGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: QACIHAKISSWLNLCHFIGGLGA*CQWGSD
Trigger: ATCACTTCCCCACTGGCAGCAGGCTCCAAGCCCTCC...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGCACAGTTGTGGCTTCTaGTTTGTTCTGTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQEHSCGF*FVLFVL
Trigger: CAGCACAAACAGAACAAAGCAGAAGCCACAACTGTG...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAATACCCTCAGTTTCCTaGAGACGGTGTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKIPSVS*RRCPMR
Trigger: CCTCATTGGACACCGTCTGCAGGAAACTGAGGGTAT...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAGAAGCACTGACAAACTaGCAGACACAGCCACCATAC +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKEALTN*QTQPPY
Trigger: GTATGGTGGCTGTGTCTGGCAGTTTGTCAGTGCTTC...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGCTGTCCATAAAGAGATaGGCTTGGCACCCAGAACAA +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKLSIKR*AWHPEQ
Trigger: TTGTTCTGGGTGCCAAGCGCATCTCTTTATGGACAG...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGTCTTCCACATGCTGTTaGTGGTGGAGGCTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKSSTCC*WWRLLL
Trigger: TAACAGAAGCCTCCACCAGCAACAGCATGTGGAAGA...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GATAGCTTTCAACAGGTCCATAGCTGTATCAGTAGACTGTGGGCTGGACTTTTTTCAAGGTTAGCACTGTaGGACTCTGCGAACTGGGAG +
Preference number: 4 (lower is better)
Translates to: DSFQQVHSCISRLWAGLFSRLAL*DSANWE
Trigger: CTCCCAGTTCGCAGAGTCCCACAGTGCTAACCTTGA...AAAAAGTCCAGCCCACAGTCTACTGATACAGCTATGGACCTGTTGAAAGCTATC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGGTCCTAAACTTCTCTTaGACTTGGAGTGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQEVLNFS*TWSVAS
Trigger: AGAAGCGACACTCCAAGTCCAAGAGAAGTTTAGGAC...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TTACATTTCAGACTAAGACAGGTAAGGCAAATGGTCAGTGATGGGTCTGGAGGTGGTGGGGACTTCTTCTaGGGTGACAGTACTCCTACA +
Preference number: 4 (lower is better)
Translates to: LHFRLRQVRQMVSDGSGGGGDFF*GDSTPT
Trigger: TGTAGGAGTACTGTCACCCCAGAAGAAGTCCCCACC...ACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTAGTCTGAAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAACTGTCTCAGGGGCTTTaGCTGGTGAGGCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKLSQGL*LVRLVT
Trigger: TGTTACCAGCCTCACCAGCCAAAGCCCCTGAGACAG...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGGAGCAGCAACATCAATaGGCTCTGTCTCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWEQQHQ*ALSQGL
Trigger: AAGCCCCTGAGACAGAGCCCATTGATGTTGCTGCTC...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGACAAGACCTGTTTaGGACAGCCATTCAATTCAG +
Preference number: 4 (lower is better)
Translates to: GQSLSITTEQLSSTACEDLTRPV*DSHSIQ
Trigger: CTGAATTGAATGGCTGTCCCAAACAGGTCTTGTCAA...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGATAAAGAGATGCGCTTaGCACCCAGAACAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWIKRCA*HPEQAP
Trigger: GGGGGCTTGTTCTGGGTGCCAAGCGCATCTCTTTAT...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TCAGGTAGTTGTGTGGTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAAATGATTCAGAGTTTTTaGAACAGACCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGSCVVRHAKGPRAQIMEMIQSF*NRPGGR
Trigger: CCTTCCTCCTGGTCTGTTCCAAAAACTCTGAATCAT...TTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACAACTCTCCGAATGGCTTaGAGAGCCAGAGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTTLRMA*RARGFL
Trigger: GAGAAATCCTCTGGCTCTTCAAGCCATTCGGAGAGT...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGCTACAGAAGAGGCTTTaGCTTTCATGGAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLLQKRL*LSWNLL
Trigger: CAGAAGGTTCCATGAAAGTCAAAGCCTCTTCTGTAG...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGCTACAGAAGAGGCTTTaGCTTTCATGGAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKLQKRL*LSWNLL
Trigger: CAGAAGGTTCCATGAAAGTCAAAGCCTCTTCTGTAG...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAAAAAACTGCTCTGAGCTaGGAAAGGGATTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLEKTALS*ERDSAA
Trigger: GGCTGCTGAATCCCTTTCTCAGCTCAGAGCAGTTTT...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACATCTTAAAACTGCTCTaGGCTGAGAAAGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNILKLL*AEKGIQ
Trigger: CTGAATCCCTTTCTCAGCTCAGAGCAGTTTTAAGAT...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAATCCAGAAGCACTGACTGTATCAGTAGACTGTaGGCTGGACTTTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: VRHAKGPRAQIMESRSTDCISRL*AGLFLF
Trigger: AAAAAGAAAAAGTCCAGCCCACAGTCTACTGATACA...GTCAGTGCTTCTGGATTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGCTGACTTTCTTCCTGTaGTGCTCCTTTTTACTCTCC +
Preference number: 4 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLLTFFL*CSFLLS
Trigger: GGAGAGTAAAAAGGAGCACCACAGGAAGAAAGTCAG...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAACGGCTTGTGAGGACTTaGTGGCTAACTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKRLVRT*WLTSCC
Trigger: GCAGCATGAAGTTAGCCACCAAGTCCTCACAAGCCG...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGTGGGAAACAAACGTCTaGTTCTCTGGAAATAAGGGC +
Preference number: 4 (lower is better)
Translates to: QSLSITTEQLSSTACEDLWETNV*FSGNKG
Trigger: GCCCTTATTTCCAGAGAACCAGACGTTTGTTTCCCA...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CAA 72 bp TTTGCTGCCAGGGCTCACAGAACTCCTTGGCCTCTGTaGAGGCCACCAATGGTACCAATGATTACAATAAAT +
Preference number: 4 (lower is better)
Translates to: FAARAHRTPWPL*RPPMVPMITIN
Trigger: ATTTATTGTAATCATTGGTACCATTGGTGGCCTCAACAGAGGCCAAGGAGTTCTGTGAGCCCTGGCAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CAA 72 bp ACTGGCACGGCAGAAAGTCCTAAACTTCTCTTGGACTaGGAGTGTCGCTTCTCTTTATGCTTCTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TGTAESPKLLLD*ECRFSLCFSLS
Trigger: AGACAAGGAGAAGCATAAAGAGAAGCGACACTCCAAGTCCAAGAGAAGTTTAGGACTTTCTGCCGTGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATGCAGACGGTGTCCAATaGGGCTTAGGGACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHADGVQ*GLGTLP
Trigger: TGGGAGAGTCCCTAAGCCTCATTGGACACCGTCTGC...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAGTCTGGAGGTCCAACTaGGCTTGGAAAATAATCACA +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKVWRSN*AWKIIT
Trigger: TGTGATTATTTTCCAAGCTCAGTTGGACCTCCAGAC...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAGGGGAACTGATAAGATaGACCCAAAAATCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKGELIR*TQKSCW
Trigger: CCAGCATGATTTTTGGGTTCATCTTATCAGTTCCCC...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAATTGGCTTCGGCCAGCTaGAAGTCCTATGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKLASAS*KSYVLK
Trigger: TTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAA...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAATCTGAGGATGACTTGTaGTTTTTCCGGGCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKSEDDL*FFRAVF
Trigger: GAAAACAGCCCGGAAAAAGCACAAGTCATCCTCAGA...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGCCAAGCCTGTATTCATaGCAAAATTTCCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLPSLYS*QNFLLA
Trigger: AGCCAAGAGGAAATTTTGGCATGAATACAGGCTTGG...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGTTTTTACTCTCCGAATaGCTTGAAGAGCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKFLLSE*LEEPED
Trigger: ATCCTCTGGCTCTTCAAGCCATTCGGAGAGTAAAAA...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TTACATTTCAGACTAAGACAGGTAAGGCAAATGGTCAGTGATGGGTCTGGAGGTGATGGTCAGCCACAATaGTCACGCGATACTCTTTAC +
Preference number: 4 (lower is better)
Translates to: LHFRLRQVRQMVSDGSGGDGQPQ*SRDTLY
Trigger: GTAAAGAGTATCGCGTGACCATTGTGGCTGACCATC...ACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTAGTCTGAAATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACACATGCTGTTGCTGGTaGAGGCTTCTGTTATTAAAT +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNTCCCW*RLLLLN
Trigger: ATTTAATAACAGAAGCCTCCACCAGCAACAGCATGT...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CAA 72 bp CAATGGTGTAGGATAAGGTTTCTGTCCCAGGATTCTTaGCTGTCACAGTCCCGGCATGATGTAAGCAATGTT +
Preference number: 4 (lower is better)
Translates to: QWCRIRFLSQDS*LSQSRHDVSNV
Trigger: AACATTGCTTACATCATGCCGGGACTGTGACAGCAAAGAATCCTGGGACAGAAACCTTATCCTACACCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACATGTCCTCAAAGGTATaGTCACCATCAAAACAATCT +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNMSSKV*SPSKQS
Trigger: AGATTGTTTTGATGGTGATCATACCTTTGAGGACAT...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp ATACTATCCATGTCTTCCCCGCCCCTCCTAGATACCCTGTGTCAAACAGGAAACTCCCTTCTCCTTTGGTaGCAGAATAAGTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: ILSMSSPPLLDTLCQTGNSLLLW*QNKFHF
Trigger: AAAATGAAACTTATTCTGTCACCAAAGGAGAAGGGA...GTTTCCTGTTTGACACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGGGGGAACTGATAAGATaGACCCAAAAATCATGCTGG +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWGELIR*TQKSCW
Trigger: CCAGCATGATTTTTGGGTTCATCTTATCAGTTCCCC...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACCCAAAGATTTACTTTaGTGCTGTAGTGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKPKDLL*CCSALS
Trigger: TGACAGAGCACTACAGCATCAAAGTAAATCTTTGGG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATAAAGCCATGGTGGTCCTaGAGGGCCTTTGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: QACIHAKISSWLNLCHFIKPWWS*RAFENV
Trigger: CACATTCTCAAAGGCCCTGCAGGACCACCATGGCTT...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTTTGTGTGGTGAGACATaGCAAGGGGCCAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTLCGET*QGAKGT
Trigger: TGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAA...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATATGTCCCAGGATTCTTTaGTGTCACAGTCCCGGCATG +
Preference number: 4 (lower is better)
Translates to: QACIHAKISSWLNLCHFICPRIL*CHSPGM
Trigger: CATGCCGGGACTGTGACAGCAAAGAATCCTGGGACA...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACCAAGCCTGTATTCATaGCAAAATTTCCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKPSLYS*QNFLLA
Trigger: AGCCAAGAGGAAATTTTGGCATGAATACAGGCTTGG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACACTTACATGTGGAATaGAGAACACTGTGTATCTGC +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKHLHVE*RTLCIC
Trigger: GCAGATACACAGTGTTCTGCATTCCACATGTAAGTG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAATCTGTATCTTCCACATaGTGTTGCTGGTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKSVSST*CCWWRL
Trigger: AAGCCTCCACCAGCAACAGCATGTGGAAGATACAGA...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGAAAACCATCCTGAAGTaGTCAACTGTCTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKKTILK*STVFFP
Trigger: TGGAAAGAAGACAGTTGAGCACTTCAGGATGGTTTT...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AAGGGATTCAGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGAAAACCATCCTGAAGTaGTCAACTGTCTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KGFSSQTTFKQHSPVTTLKTILK*STVFFP
Trigger: TGGAAAGAAGACAGTTGAGCACTTCAGGATGGTTTT...CAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCTGAATCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAGATGGTCAGCCACAATaGTCACGCGATACTCTTTAC +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKDGQPQ*SRDTLY
Trigger: GTAAAGAGTATCGCGTGACCATTGTGGCTGACCATC...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TTACATTTCAGACTAAGACAGGTAAGGCAAATGGTCAGTGATGGGTCTGGAGGTAAATCTATACCTGGATaGTCAGCCACAATGGTCACG +
Preference number: 4 (lower is better)
Translates to: LHFRLRQVRQMVSDGSGGKSIPG*SATMVT
Trigger: CGTGACCATTGTGGCTGACCATCCAGGTATAGATTT...ACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTAGTCTGAAATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACAAAATCTATACCTGGATaGTCAGCCACAATGGTCACG +
Preference number: 4 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTKSIPG*SATMVT
Trigger: CGTGACCATTGTGGCTGACCATCCAGGTATAGATTT...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAACCCAAAATCTATACCTaGATGGTCAGCCACAATGGT +
Preference number: 4 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLEPKIYT*MVSHNG
Trigger: ACCATTGTGGCTGACCATCCAGGTATAGATTTTGGG...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TTACATTTCAGACTAAGACAGGTAAGGCAAATGGTCAGTGATGGGTCTGGAGGTCCCAAAATCTATACCTaGATGGTCAGCCACAATGGT +
Preference number: 4 (lower is better)
Translates to: LHFRLRQVRQMVSDGSGGPKIYT*MVSHNG
Trigger: ACCATTGTGGCTGACCATCCAGGTATAGATTTTGGG...ACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTAGTCTGAAATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGACCCAAAAATCATGCTaGGCAAAGTTTATCCATAAC +
Preference number: 4 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQETQKSC*AKFIHN
Trigger: GTTATGGATAAACTTTGCCCAGCATGATTTTTGGGT...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGTCCACATGCTGTTGCTaGTGGAGGCTTCTGTTATTA +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWSTCCC*WRLLLL
Trigger: TAATAACAGAAGCCTCCACCAGCAACAGCATGTGGA...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAATGATTCAGAGTTTTTaGAACAGACCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKMIQSF*NRPGGR
Trigger: CCTTCCTCCTGGTCTGTTCCAAAAACTCTGAATCAT...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAACTCAGAGCTTGGTGTTaGCAGAGAATCTCATACCAA +
Preference number: 4 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLELRAWC*QRISYQ
Trigger: TTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAG...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGCTCAGAGCTTGGTGTTaGCAGAGAATCTCATACCAA +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWLRAWC*QRISYQ
Trigger: TTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAG...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGTCCCTTCTCCTTTGGTaGCAGAATAAGTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: SFWNRPGGRKERGKETGKSLLLW*QNKFHF
Trigger: AAAATGAAACTTATTCTGTCACCAAAGGAGAAGGGA...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAAAATAGGTTCAAGCCCTaGAAGATCAAGGTTAGCACT +
Preference number: 4 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLENRFKP*KIKVST
Trigger: AGTGCTAACCTTGATCTTTCAGGGCTTGAACCTATT...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATGGAATCCAGAAGCACTaGCAAACTGCCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHGIQKH*QTARHS
Trigger: GCTGTGTCTGGCAGTTTGTCAGTGCTTCTGGATTCC...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTAAGGCAAATGGTCAGTaGTGGGTCTGGAGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTKANGQ*WVWRSN
Trigger: GTTGGACCTCCAGACCCATCACTGACCATTTGCCTT...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAACTTCATGCTGCCAGTaGAAGACACCAGCACTTAAT +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKTSCCQ*KTPALN
Trigger: ATTAAGTGCTGGTGTCTTTCACTGGCAGCATGAAGT...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAATCTGAGGATGACTTGTaGTTTTTCCGGGCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKSEDDL*FFRAVF
Trigger: GAAAACAGCCCGGAAAAAGCACAAGTCATCCTCAGA...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp TTACATTTCAGACTAAGACAGGTAAGGCAAATGGTCAGTGATGGGTCTGGAGGTTCTTTTTCTGGTAATTaGTTCCACACCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LHFRLRQVRQMVSDGSGGSFSGN*FHTSAS
Trigger: ACTGGCTGAGGTGTGGAAGCAATTACCAGAAAAAGA...ACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTAGTCTGAAATGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGTCTTTTTCTGGTAATTaGTTCCACACCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWSFSGN*FHTSAS
Trigger: ACTGGCTGAGGTGTGGAAGCAATTACCAGAAAAAGA...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR GCA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACACACTTACATGTGGAATaGAGAACACTGTGTATCTGC +
Preference number: 4 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTHLHVE*RTLCIC
Trigger: GCAGATACACAGTGTTCTGCATTCCACATGTAAGTG...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTCTGGTAACAGCATGGTaGTGGGTGGGGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTLVTAW*WVGTSS
Trigger: AGAAGAAGTCCCCACCCACCACCATGCTGTTACCAG...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTGAGCAGCAACATCAATaGGCTCTGTCTCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTEQQHQ*ALSQGL
Trigger: AAGCCCCTGAGACAGAGCCCATTGATGTTGCTGCTC...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAAGCCAAAATTTCCTCTTaGCTAAACCTTTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKAKISS*LNLCHF
Trigger: GAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGC...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGCTATACAGTAGGAATTaGAATGAACCCTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: QSLSITTEQLSSTACEDLLYSRN*NEPSTQ
Trigger: TTGAGTAGAGGGTTCATTCCAATTCCTACTGTATAG...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGGATACAGAAGAGGCATaGTACAATGTTCTAACACAT +
Preference number: 4 (lower is better)
Translates to: QSLSITTEQLSSTACEDLDTEEA*YNVLTH
Trigger: ATGTGTTAGAACATTGTACCATGCCTCTTCTGTATC...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
3UTR CAA 72 bp CAGGGCCAGGAGAAGAAAGCACAGTTAACTCAGAGCTaGGTGTTGGCAGAGAATCTCATACCAAATTTAAAA +
Preference number: 4 (lower is better)
Translates to: QGQEKKAQLTQS*VLAENLIPNLK
Trigger: TTTTAAATTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTCTCCTGGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGAACTGCAAGAAGGTCTaGATCCAAAGTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWNCKKV*IQSFSS
Trigger: AGAGGAAAAACTTTGGATTCAGACCTTCTTGCAGTT...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GATAGCTTTCAACAGGTCCATAGCTGTATCAGTAGACTGTGGGCTGGACTTTTTAACTGCAAGAAGGTCTaGATCCAAAGTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DSFQQVHSCISRLWAGLFNCKKV*IQSFSS
Trigger: AGAGGAAAAACTTTGGATTCAGACCTTCTTGCAGTT...AAAAAGTCCAGCCCACAGTCTACTGATACAGCTATGGACCTGTTGAAAGCTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR GCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTGAAGCACTGACAAACTaGCAGACACAGCCACCATAC +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTEALTN*QTQPPY
Trigger: GTATGGTGGCTGTGTCTGGCAGTTTGTCAGTGCTTC...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACAGCCCCCAAGTTACATTaGTTTTTAAGGCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTAPKLH*FLRQIY
Trigger: ATAAATCTGCCTTAAAAATCAATGTAACTTGGGGGC...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATAGTCTGGAGGTCCAACTaGGCTTGGAAAATAATCACA +
Preference number: 4 (lower is better)
Translates to: QACIHAKISSWLNLCHFIVWRSN*AWKIIT
Trigger: TGTGATTATTTTCCAAGCTCAGTTGGACCTCCAGAC...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp AAGTGCTCAACTGTCTTCTTTCCAACTGGGAAACAAACGTCTGGTTCTCTGGAAGATACAGAAGAGGCATaGTACAATGTTCTAACACAT +
Preference number: 4 (lower is better)
Translates to: KCSTVFFPTGKQTSGSLEDTEEA*YNVLTH
Trigger: ATGTGTTAGAACATTGTACCATGCCTCTTCTGTATC...TTCCAGAGAACCAGACGTTTGTTTCCCAGTTGGAAAGAAGACAGTTGAGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp ATCACAAATGCAGACTGTTCTTCTATGCTGAATCCTCCAAAATACCAGCCCTCCCAAAGACGAAATATCTaGTGTATCACAAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: ITNADCSSMLNPPKYQPSQRRNI*CITNAD
Trigger: GTCTGCATTTGTGATACACCAGATATTTCGTCTTTG...GGAGGGCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGTCTGCATTTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAATGTCCTCAAAGGTATaGTCACCATCAAAACAATCT +
Preference number: 4 (lower is better)
Translates to: EESTVNSELGVGRESHTKMSSKV*SPSKQS
Trigger: AGATTGTTTTGATGGTGATCATACCTTTGAGGACAT...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATGAAGAATTCCTGACCTaGGCAGCAATTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHEEFLT*AAISSS
Trigger: AGAGGAAGAAATTGCTGCTCAGGTCAGGAATTCTTC...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATATCTTGGAAGAATTCCTaGCCTGAGCAGCAATTTCTT +
Preference number: 4 (lower is better)
Translates to: QACIHAKISSWLNLCHFISWKNS*PEQQFL
Trigger: AAGAAATTGCTGCTCAGGTCAGGAATTCTTCCAAGA...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATATTGTGCTGCAGATACTaGGCTTTTTGCTTCCAAATC +
Preference number: 4 (lower is better)
Translates to: QACIHAKISSWLNLCHFILCCRY*AFCFQI
Trigger: GATTTGGAAGCAAAAAGCTCAGTATCTGCAGCACAA...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATATTTTTACTCTCCGAATaGCTTGAAGAGCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: QACIHAKISSWLNLCHFIFLLSE*LEEPED
Trigger: ATCCTCTGGCTCTTCAAGCCATTCGGAGAGTAAAAA...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTTGGGAAACAAACGTCTaGTTCTCTGGAAATAAGGGC +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTWETNV*FSGNKG
Trigger: GCCCTTATTTCCAGAGAACCAGACGTTTGTTTCCCA...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTAATAGGTTCAAGCCCTaGAAGATCAAGGTTAGCACT +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTNRFKP*KIKVST
Trigger: AGTGCTAACCTTGATCTTTCAGGGCTTGAACCTATT...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTTTGTGCTGCAGATACTaGGCTTTTTGCTTCCAAATC +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTLCCRY*AFCFQI
Trigger: GATTTGGAAGCAAAAAGCTCAGTATCTGCAGCACAA...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTCCCAAAGATTTACTTTaGTGCTGTAGTGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTPKDLL*CCSALS
Trigger: TGACAGAGCACTACAGCATCAAAGTAAATCTTTGGG...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATATCTTAAAACTGCTCTaGGCTGAGAAAGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHILKLL*AEKGIQ
Trigger: CTGAATCCCTTTCTCAGCTCAGAGCAGTTTTAAGAT...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR TCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTACTGTTCTTCTATGCTaGATCCTCCAAAATACCAGC +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTTVLLC*ILQNTS
Trigger: GCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGT...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
3UTR CAA 72 bp TTGGACTTGGAGTGTCGCTTCTCTTTATGCTTCTCCTaGTCTTTCTTCTTTTTGCTCTTCTTTGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: LDLECRFSLCFS*SFFFLLFFDFF
Trigger: AAAGAAGTCAAAGAAGAGCAAAAAGAAGAAAGACAAGGAGAAGCATAAAGAGAAGCGACACTCCAAGTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR TCA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATACAAATTGAAAGGCTTTaGATTTTCAGTCAACTGGCA +
Preference number: 4 (lower is better)
Translates to: QACIHAKISSWLNLCHFIQIERL*IFSQLA
Trigger: TGCCAGTTGACTGAAAATTCAAAGCCTTTCAATTTG...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATATGTATCAGTAGACTGTaGGCTGGACTTTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: QACIHAKISSWLNLCHFICISRL*AGLFLF
Trigger: AAAAAGAAAAAGTCCAGCCCACAGTCTACTGATACA...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CCA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTACCCAAAAATCATGCTaGGCAAAGTTTATCCATAAC +
Preference number: 4 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTTQKSC*AKFIHN
Trigger: GTTATGGATAAACTTTGCCCAGCATGATTTTTGGGT...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS CCA 90 bp AGTGAATCTACAAGTAGTAGTTGGTGGAGGGAAAATGGGCCTGCATaGAGAAGGCGCCCACCACGAAGGCACGGCCAAGCCGGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: SESTSSSWWRENGPA*RRRPPRRHGQAGLH
Trigger: GTGCAACCCGGCTTGGCCGTGCCTTCGTGGTGGGCGCCTTCTCCATGCAGGCCCATTTTCCCTCCACCAACTACTACTTGTAGATTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS CCA 90 bp GCCCCTGCCAGCTCTGGAAGCTGCAGAGATCCCGACAGTCGGGGATaGGGATTGAATCCTCTCATTGCAGTGCAATTAAGCGGAACCACG +
Preference number: 5 (lower is better)
Translates to: APASSGSCRDPDSRG*GLNPLIAVQLSGTT
Trigger: CGTGGTTCCGCTTAATTGCACTGCAATGAGAGGATTCAATCCCCATCCCCGACTGTCGGGATCTCTGCAGCTTCCAGAGCTGGCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS GCA 90 bp CTGCAGAGATCCCGACAGTCGGGGATGGGGATTGAATCCTCTCATTaGAGTGCAATTAAGCGGAACCACGACCACCGCACAGATTGGCTG +
Preference number: 5 (lower is better)
Translates to: LQRSRQSGMGIESSH*SAIKRNHDHRTDWL
Trigger: CAGCCAATCTGTGCGGTGGTCGTGGTTCCGCTTAATTGCACTGCAATGAGAGGATTCAATCCCCATCCCCGACTGTCGGGATCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS-3UTR CAA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACGTCTTTTTGGAGGGCTaGGAGCCTGCTGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GQSLSITTEQLSSTACEDVFLEG*EPAASG
Trigger: CCCACTGGCAGCAGGCTCCAAGCCCTCCAAAAAGAC...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS GCA 90 bp CTGCATGGAGAAGGCGCCCACCACGAAGGCACGGCCAAGCCGGGTTaGACGCAAGAAACACACAAAATACCAGGTGATTTACACAAACAG +
Preference number: 5 (lower is better)
Translates to: LHGEGAHHEGTAKPG*TQETHKIPGDLHKQ
Trigger: CTGTTTGTGTAAATCACCTGGTATTTTGTGTGTTTCTTGCGTGCAACCCGGCTTGGCCGTGCCTTCGTGGTGGGCGCCTTCTCCATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS-3UTR CAA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTCTGTCTCAGGGGCTTaGGCTGGTGAGGCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: GQSLSITTEQLSSTACEDSVSGA*AGEAGN
Trigger: GTTACCAGCCTCACCAGCCAAAGCCCCTGAGACAGA...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACCATAAAGAGATGCGCTaGGCACCCAGAACAAGCCCC +
Preference number: 5 (lower is better)
Translates to: GQSLSITTEQLSSTACEDHKEMR*APRTSP
Trigger: GGGGCTTGTTCTGGGTGCCAAGCGCATCTCTTTATG...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp GTGAGACATGCCAAGGGGCCAAGGGCACAGATAATGGAATCCAGAAGCACTGACACGGCTTGTGAGGACTaGGTGGCTAACTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: VRHAKGPRAQIMESRSTDTACED*VANFML
Trigger: CAGCATGAAGTTAGCCACCAAGTCCTCACAAGCCGT...GTCAGTGCTTCTGGATTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CAA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACGCGTCTGAGGATGACTaGTGCTTTTTCCGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: GQSLSITTEQLSSTACEDASEDD*CFFRAV
Trigger: AACAGCCCGGAAAAAGCACAAGTCATCCTCAGACGC...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGTCTGTCTCAGGGGCTTaGGCTGGTGAGGCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: SFWNRPGGRKERGKETGKSVSGA*AGEAGN
Trigger: GTTACCAGCCTCACCAGCCAAAGCCCCTGAGACAGA...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGAACGGCTTGTGAGGACTaGGTGGCTAACTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRTACED*VANFML
Trigger: CAGCATGAAGTTAGCCACCAAGTCCTCACAAGCCGT...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS GCA 90 bp AACAATCTTCTTTCTTCACGGAGTCATCATAAGCCATGGTGGTCCTaGAGGGCCTTTGAGAATGTGTCACTGTGTCCAGGCTCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: NNLLSSRSHHKPWWS*RAFENVSLCPGSFP
Trigger: CGGGAAGGAGCCTGGACACAGTGACACATTCTCAAAGGCCCTGCAGGACCACCATGGCTTATGATGACTCCGTGAAGAAAGAAGATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216106.6
ENST00000418170.5
ENST00000498325.5
CDS-3UTR CAA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAATTCTCCCCAGTCTTTTaGGAGGGCTTGGAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKFSPVF*EGLEPA
Trigger: AGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGAGAA...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAACTGTCCCAGGATTCTTaGCTGTCACAGTCCCGGCAT +
Preference number: 5 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKLSQDS*LSQSRH
Trigger: ATGCCGGGACTGTGACAGCAAAGAATCCTGGGACAG...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGACAGTTAACTCAGAGCTaGGTGTTGGCAGAGAATCTC +
Preference number: 5 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRQLTQS*VLAENL
Trigger: GAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTG...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp CACCAGCACTTAATTCTGCCGACTAAAGATTCTGGGTTAGCTCAGAATGTATGGGGTCCTGCAGGGCCTTaGAGAATGTGTCACTGTGTC +
Preference number: 5 (lower is better)
Translates to: HQHLILPTKDSGLAQNVWGPAGP*RMCHCV
Trigger: GACACAGTGACACATTCTCAAAGGCCCTGCAGGACC...CCATACATTCTGAGCTAACCCAGAATCTTTAGTCGGCAGAATTAAGTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp GATAGCTTTCAACAGGTCCATAGCTGTATCAGTAGACTGTGGGCTGGACTTTTTTTCTCCCCAGTCTTTTaGGAGGGCTTGGAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: DSFQQVHSCISRLWAGLFFSPVF*EGLEPA
Trigger: AGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGAGAA...AAAAAGTCCAGCCCACAGTCTACTGATACAGCTATGGACCTGTTGAAAGCTATC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CAA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGCAGTTAACTCAGAGCTaGGTGTTGGCAGAGAATCTC +
Preference number: 5 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQEQLTQS*VLAENL
Trigger: GAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTG...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAGGTCCTGCAGGGCCTTaGAGAATGTGTCACTGTGTC +
Preference number: 5 (lower is better)
Translates to: EESTVNSELGVGRESHTKGPAGP*RMCHCV
Trigger: GACACAGTGACACATTCTCAAAGGCCCTGCAGGACC...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGAAAACTTCTCTTGGACTaGGAGTGTCGCTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRKLLLD*ECRFSL
Trigger: TAAAGAGAAGCGACACTCCAAGTCCAAGAGAAGTTT...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS TCA 90 bp ATTGCAGTGCAATTAAGCGGAACCACGACCACCGCACAGATTGGCTaGCAACACACATTCCATAAGACCAGCAATCGAATTTTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: IAVQLSGTTTTAQIG*QHTFHKTSNRILRS
Trigger: GCTTCTCAAAATTCGATTGCTGGTCTTATGGAATGTGTGTTGTCAGCCAATCTGTGCGGTGGTCGTGGTTCCGCTTAATTGCACTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS TCA 90 bp TATGCAAAGGCCCCATGTGCAACCTCAGATATGGTTTCTGAGTTGTaGTTTGGTAGGAGGACACAGACTTGCAGACGAAAGGCTGAAAAG +
Preference number: 5 (lower is better)
Translates to: YAKAPCATSDMVSEL*FGRRTQTCRRKAEK
Trigger: CTTTTCAGCCTTTCGTCTGCAAGTCTGTGTCCTCCTACCAAATCACAACTCAGAAACCATATCTGAGGTTGCACATGGGGCCTTTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464480.1
CDS CCA 90 bp CAATGTTTCCATGCTATGCAAAGGCCCCATGTGCAACCTCAGATATaGTTTCTGAGTTGTGATTTGGTAGGAGGACACAGACTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: QCFHAMQRPHVQPQI*FLSCDLVGGHRLAD
Trigger: GTCTGCAAGTCTGTGTCCTCCTACCAAATCACAACTCAGAAACCATATCTGAGGTTGCACATGGGGCCTTTGCATAGCATGGAAACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464480.1
CDS-3UTR CAA 90 bp GAAGAAAGCACAGTTAACTCAGAGCTTGGTGTTGGCAGAGAATCTCATACCAAAGCGTCTGAGGATGACTaGTGCTTTTTCCGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: EESTVNSELGVGRESHTKASEDD*CFFRAV
Trigger: AACAGCCCGGAAAAAGCACAAGTCATCCTCAGACGC...TTTGGTATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGCTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACCAGATACTGAGCTTTTaGCTTCCAAATCAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: GQSLSITTEQLSSTACEDQILSF*LPNQFV
Trigger: GACAAACTGATTTGGAAGCAAAAAGCTCAGTATCTG...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AGCAGCCAGACTACCTTTAAGCAACATAGCCCTGTGACAACACTGGTGGGGAGACAGATACTGAGCTTTTaGCTTCCAAATCAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: SSQTTFKQHSPVTTLVGRQILSF*LPNQFV
Trigger: GACAAACTGATTTGGAAGCAAAAAGCTCAGTATCTG...TCTCCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AACTCCCCAGCCTCTAGTTCCCCACCAGAGGATGAGTCTGATTCTACCAGAATATTTGACAAGACCTGTTaGGGACAGCCATTCAATTCA +
Preference number: 5 (lower is better)
Translates to: NSPASSSPPEDESDSTRIFDKTC*GQPFNS
Trigger: TGAATTGAATGGCTGTCCCAAACAGGTCTTGTCAAA...TATTCTGGTAGAATCAGACTCATCCTCTGGTGGGGAACTAGAGGCTGGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CAA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTGCCAAAATTTCCTCTaGGCTAAACCTTTGCCATTT +
Preference number: 5 (lower is better)
Translates to: GQSLSITTEQLSSTACEDCQNFL*AKPLPF
Trigger: AAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCA...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS TCA 90 bp TCTCGTTGGCTTCGGCCAGCTGCAAGTCCTATGTCCTCAAAGGTATaGTCACCATCAAAACAATCTGAGAAGCACAGGTTTATTTGGGAA +
Preference number: 5 (lower is better)
Translates to: SRWLRPAASPMSSKV*SPSKQSEKHRFIWE
Trigger: TTCCCAAATAAACCTGTGCTTCTCAGATTGTTTTGATGGTGATCATACCTTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAACGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464480.1
CDS-3UTR CAA 90 bp AGTTTTTGGAACAGACCAGGAGGAAGGAAGGAAAGAGGGAAGGAAACAGGGAAGTTTCACAGTCGCTTGTaGGGAGGGATATTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: SFWNRPGGRKERGKETGKFHSRL*GGILKR
Trigger: TCTTTTCAATATCCCTCCCAACAAGCGACTGTGAAA...CTTCCCTGTTTCCTTCCCTCTTTCCTTCCTTCCTCCTGGTCTGTTCCAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACAGTTGTGGCTTCTGCTTaGTTCTGTTTGTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTVVASA*FCLCCR
Trigger: TCTGCAGCACAAACAGAACAAAGCAGAAGCCACAAC...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CAA 90 bp GGGCAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACAGCCCCCAAGTTACATaGATTTTTAAGGCAGATTTA +
Preference number: 5 (lower is better)
Translates to: GQSLSITTEQLSSTACEDSPQVT*IFKADL
Trigger: TAAATCTGCCTTAAAAATCAATGTAACTTGGGGGCT...GTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp ACACTGTCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGTGCTTCCAAATCAGTTaGTCTTTTTCTGGTAATTGC +
Preference number: 5 (lower is better)
Translates to: TLSPKIYFDAVVLCQGQECFQIS*SFSGNC
Trigger: GCAATTACCAGAAAAAGACAAACTGATTTGGAAGCA...CTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACACCTACAGAAGAGGCTTaGACTTTCATGGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTPTEEA*TFMEPS
Trigger: AGAAGGTTCCATGAAAGTCAAAGCCTCTTCTGTAGG...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CAA 90 bp TCCCCAAAGATTTACTTTGATGCTGTAGTGCTCTGTCAGGGCCAGGAGAAGAAATTTGACAAGACCTGTTaGGGACAGCCATTCAATTCA +
Preference number: 5 (lower is better)
Translates to: SPKIYFDAVVLCQGQEKKFDKTC*GQPFNS
Trigger: TGAATTGAATGGCTGTCCCAAACAGGTCTTGTCAAA...TTTCTTCTCCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATCTGTCCCAGGATTCTTaGCTGTCACAGTCCCGGCAT +
Preference number: 5 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHLSQDS*LSQSRH
Trigger: ATGCCGGGACTGTGACAGCAAAGAATCCTGGGACAG...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp GAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTTCAGACTCATAAAGAGATGCGCTaGGCACCCAGAACAAGCCCC +
Preference number: 5 (lower is better)
Translates to: EFSVNWHLPVIFPITFQTHKEMR*APRTSP
Trigger: GGGGCTTGTTCTGGGTGCCAAGCGCATCTCTTTATG...AGTCTGAAATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AATCTATACCTGGATGGTCAGCCACAATGGTCACGCGATACTCTTTACAGAACAAAACTTCTCTTGGACTaGGAGTGTCGCTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: NLYLDGQPQWSRDTLYRTKLLLD*ECRFSL
Trigger: TAAAGAGAAGCGACACTCCAAGTCCAAGAGAAGTTT...TGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418170.5
CDS-3UTR CAA 90 bp CAAAGTTTATCCATAACCACCGAGCAACTAAGCAGCACGGCTTGTGAGGACTTGAGCCCCCAAGTTACATaGATTTTTAAGGCAGATTTA +
Preference number: 5 (lower is better)
Translates to: QSLSITTEQLSSTACEDLSPQVT*IFKADL
Trigger: TAAATCTGCCTTAAAAATCAATGTAACTTGGGGGCT...CAAGTCCTCACAAGCCGTGCTGCTTAGTTGCTCGGTGGTTATGGATAAACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS GCA 90 bp CTAGCTGCAAATACAAGAATCAAACCTGAAGAAACAATGTTTCCATaGTATGCAAAGGCCCCATGTGCAACCTCAGATATGGTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: LAANTRIKPEETMFP*YAKAPCATSDMVSE
Trigger: CTCAGAAACCATATCTGAGGTTGCACATGGGGCCTTTGCATAGCATGGAAACATTGTTTCTTCAGGTTTGATTCTTGTATTTGCAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464480.1
CDS-3UTR CAA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATATACTCTCCGAATGGCTaGAAGAGCCAGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: QACIHAKISSWLNLCHFIYSPNG*KSQRIS
Trigger: AGAAATCCTCTGGCTCTTCAAGCCATTCGGAGAGTA...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATAGTTGTGGCTTCTGCTTaGTTCTGTTTGTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: QACIHAKISSWLNLCHFIVVASA*FCLCCR
Trigger: TCTGCAGCACAAACAGAACAAAGCAGAAGCCACAAC...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp TTACATTTCAGACTAAGACAGGTAAGGCAAATGGTCAGTGATGGGTCTGGAGGTTGCCAAAATTTCCTCTaGGCTAAACCTTTGCCATTT +
Preference number: 5 (lower is better)
Translates to: LHFRLRQVRQMVSDGSGGCQNFL*AKPLPF
Trigger: AAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCA...ACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTAGTCTGAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp AAGGCTTTGAATTTTCAGTCAACTGGCATCTTCCCGTTATCTTTCCTATTACATTACTCTCCGAATGGCTaGAAGAGCCAGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: KALNFQSTGIFPLSFLLHYSPNG*KSQRIS
Trigger: AGAAATCCTCTGGCTCTTCAAGCCATTCGGAGAGTA...ATGTAATAGGAAAGATAACGGGAAGATGCCAGTTGACTGAAAATTCAAAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp TTACATTTCAGACTAAGACAGGTAAGGCAAATGGTCAGTGATGGGTCTGGAGGTTGCTTCCAAATCAGTTaGTCTTTTTCTGGTAATTGC +
Preference number: 5 (lower is better)
Translates to: LHFRLRQVRQMVSDGSGGCFQIS*SFSGNC
Trigger: GCAATTACCAGAAAAAGACAAACTGATTTGGAAGCA...ACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTAGTCTGAAATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS-3UTR CAA 90 bp CAAGCCTGTATTCATGCCAAAATTTCCTCTTGGCTAAACCTTTGCCATTTCATACCTACAGAAGAGGCTTaGACTTTCATGGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: QACIHAKISSWLNLCHFIPTEEA*TFMEPS
Trigger: AGAAGGTTCCATGAAAGTCAAAGCCTCTTCTGTAGG...TATGAAATGGCAAAGGTTTAGCCAAGAGGAAATTTTGGCATGAATACAGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000418170.5
CDS TCA 90 bp AGATTGGCTGACAACACACATTCCATAAGACCAGCAATCGAATTTTaGGAAGCCTTGTCCAATCAACAGGCTTTATTTGGGATTCAGTTT +
Preference number: 5 (lower is better)
Translates to: RLADNTHSIRPAIEF*EALSNQQALFGIQF
Trigger: AAACTGAATCCCAAATAAAGCCTGTTGATTGGACAAGGCTTCTCAAAATTCGATTGCTGGTCTTATGGAATGTGTGTTGTCAGCCAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS TCA 90 bp AGCTGTATCAGTAGACTGTGGGCTGGACTTTTTCTTTTTCTTCTGTaGCGATTCCAAAGACGAAATATCTCCATAGTAGTAATCATCAGA +
Preference number: 5 (lower is better)
Translates to: SCISRLWAGLFLFLL*RFQRRNISIVVIIR
Trigger: TCTGATGATTACTACTATGGAGATATTTCGTCTTTGGAATCGTCACAGAAGAAAAAGAAAAAGTCCAGCCCACAGTCTACTGATACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216106.6
ENST00000420166.5
CDS TCA 90 bp TGCAAGTCCTATGTCCTCAAAGGTATGATCACCATCAAAACAATCTaGGAAGCACAGGTTTATTTGGGAAAGGAAATGAGAAAGTCAAGT +
Preference number: 5 (lower is better)
Translates to: CKSYVLKGMITIKTI*EAQVYLGKEMRKSS
Trigger: ACTTGACTTTCTCATTTCCTTTCCCAAATAAACCTGTGCTTCTCAGATTGTTTTGATGGTGATCATACCTTTGAGGACATAGGACTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464480.1
CDS CCA 72 bp ACAAGTAGTAGTTGGTGGAGGGAAAATGGGCCTGCATaGAGAAGGCGCCCACCACGAAGGCACGGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: TSSSWWRENGPA*RRRPPRRHGQA
Trigger: GGCTTGGCCGTGCCTTCGTGGTGGGCGCCTTCTCCATGCAGGCCCATTTTCCCTCCACCAACTACTACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS CAA 90 bp GCCAGCTCTGGAAGCTGCAGAGATCCCGACAGTCGGGGATGGGGATaGAATCCTCTCATTGCAGTGCAATTAAGCGGAACCACGACCACC +
Preference number: 6 (lower is better)
Translates to: ASSGSCRDPDSRGWG*NPLIAVQLSGTTTT
Trigger: GGTGGTCGTGGTTCCGCTTAATTGCACTGCAATGAGAGGATTCAATCCCCATCCCCGACTGTCGGGATCTCTGCAGCTTCCAGAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS CAA 90 bp TTTTTGTGGTCCCCAAGGCAAACCAGTGGGATTCTCCCGGCAGTTTaGCGGCAACAGCTAGCTCAACAAAGCTCTTCACTCGGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: FLWSPRQTSGILPAV*RQQLAQQSSSLGSP
Trigger: GGGCGAGCCGAGTGAAGAGCTTTGTTGAGCTAGCTGTTGCCGCAAAACTGCCGGGAGAATCCCACTGGTTTGCCTTGGGGACCACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS GCA 72 bp GAAGGCGCCCACCACGAAGGCACGGCCAAGCCGGGTTaGACGCAAGAAACACACAAAATACCAGGTGATTTA +
Preference number: 6 (lower is better)
Translates to: EGAHHEGTAKPG*TQETHKIPGDL
Trigger: TAAATCACCTGGTATTTTGTGTGTTTCTTGCGTGCAACCCGGCTTGGCCGTGCCTTCGTGGTGGGCGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS GCA 72 bp TCCCGACAGTCGGGGATGGGGATTGAATCCTCTCATTaGAGTGCAATTAAGCGGAACCACGACCACCGCACA +
Preference number: 6 (lower is better)
Translates to: SRQSGMGIESSH*SAIKRNHDHRT
Trigger: TGTGCGGTGGTCGTGGTTCCGCTTAATTGCACTGCAATGAGAGGATTCAATCCCCATCCCCGACTGTCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS CAA 72 bp TCCCCAAGGCAAACCAGTGGGATTCTCCCGGCAGTTTaGCGGCAACAGCTAGCTCAACAAAGCTCTTCACTC +
Preference number: 6 (lower is better)
Translates to: SPRQTSGILPAV*RQQLAQQSSSL
Trigger: GAGTGAAGAGCTTTGTTGAGCTAGCTGTTGCCGCAAAACTGCCGGGAGAATCCCACTGGTTTGCCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS CAA 72 bp GGAAGCTGCAGAGATCCCGACAGTCGGGGATGGGGATaGAATCCTCTCATTGCAGTGCAATTAAGCGGAACC +
Preference number: 6 (lower is better)
Translates to: GSCRDPDSRGWG*NPLIAVQLSGT
Trigger: GGTTCCGCTTAATTGCACTGCAATGAGAGGATTCAATCCCCATCCCCGACTGTCGGGATCTCTGCAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS GCA 72 bp GAAATCACTGAGGAGAAGCAACCTTCCAGATGGAAATaGGCAGTGATCCAAGGGCTGACTGGAAGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: EITEEKQPSRWK*AVIQGLTGRAA
Trigger: TGCTGCCCTTCCAGTCAGCCCTTGGATCACTGCGCATTTCCATCTGGAAGGTTGCTTCTCCTCAGTGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498325.5
CDS CCA 72 bp AGCTCTGGAAGCTGCAGAGATCCCGACAGTCGGGGATaGGGATTGAATCCTCTCATTGCAGTGCAATTAAGC +
Preference number: 6 (lower is better)
Translates to: SSGSCRDPDSRG*GLNPLIAVQLS
Trigger: GCTTAATTGCACTGCAATGAGAGGATTCAATCCCCATCCCCGACTGTCGGGATCTCTGCAGCTTCCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS TCA 72 bp TGTGTCCAGGCTCCTTCCCGTCTACAGGACCAGGTCTaGGAAACAAAGAAGGAAAACCCTCCTGTAATGCGA +
Preference number: 6 (lower is better)
Translates to: CVQAPSRLQDQV*ETKKENPPVMR
Trigger: TCGCATTACAGGAGGGTTTTCCTTCTTTGTTTCTCAGACCTGGTCCTGTAGACGGGAAGGAGCCTGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498325.5
CDS TCA 72 bp GCCCCATGTGCAACCTCAGATATGGTTTCTGAGTTGTaGTTTGGTAGGAGGACACAGACTTGCAGACGAAAG +
Preference number: 6 (lower is better)
Translates to: APCATSDMVSEL*FGRRTQTCRRK
Trigger: CTTTCGTCTGCAAGTCTGTGTCCTCCTACCAAATCACAACTCAGAAACCATATCTGAGGTTGCACATGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464480.1
CDS TCA 72 bp CAATTAAGCGGAACCACGACCACCGCACAGATTGGCTaGCAACACACATTCCATAAGACCAGCAATCGAATT +
Preference number: 6 (lower is better)
Translates to: QLSGTTTTAQIG*QHTFHKTSNRI
Trigger: AATTCGATTGCTGGTCTTATGGAATGTGTGTTGTCAGCCAATCTGTGCGGTGGTCGTGGTTCCGCTTAATTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS CAA 72 bp CATGTGCAACCTCAGATATGGTTTCTGAGTTGTGATTaGGTAGGAGGACACAGACTTGCAGACGAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: HVQPQIWFLSCD*VGGHRLADERL
Trigger: CAGCCTTTCGTCTGCAAGTCTGTGTCCTCCTACCAAATCACAACTCAGAAACCATATCTGAGGTTGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464480.1
CDS CAA 90 bp CAAAGGCCCCATGTGCAACCTCAGATATGGTTTCTGAGTTGTGATTaGGTAGGAGGACACAGACTTGCAGACGAAAGGCTGAAAAGAATA +
Preference number: 6 (lower is better)
Translates to: QRPHVQPQIWFLSCD*VGGHRLADERLKRI
Trigger: TATTCTTTTCAGCCTTTCGTCTGCAAGTCTGTGTCCTCCTACCAAATCACAACTCAGAAACCATATCTGAGGTTGCACATGGGGCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464480.1
CDS TCA 72 bp ACAAAGAAGGAAAACCCTCCTGTAATGCGAAATCACTaGGGAGAAGCAACCTTCCAGATGGAAATGCGCAGT +
Preference number: 6 (lower is better)
Translates to: TKKENPPVMRNH*GEATFQMEMRS
Trigger: ACTGCGCATTTCCATCTGGAAGGTTGCTTCTCCTCAGTGATTTCGCATTACAGGAGGGTTTTCCTTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498325.5
CDS TCA 72 bp GACAACACACATTCCATAAGACCAGCAATCGAATTTTaGGAAGCCTTGTCCAATCAACAGGCTTTATTTGGG +
Preference number: 6 (lower is better)
Translates to: DNTHSIRPAIEF*EALSNQQALFG
Trigger: CCCAAATAAAGCCTGTTGATTGGACAAGGCTTCTCAAAATTCGATTGCTGGTCTTATGGAATGTGTGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466438.1
CDS TCA 72 bp GTTCACTATCCTTCAACTTCTTCTTGGAAGAATTCCTaGCCTGAGCAGCAATTTCTTCCTCTTCCCTTAAAA +
Preference number: 6 (lower is better)
Translates to: VHYPSTSSWKNS*PEQQFLPLPLK
Trigger: TTTTAAGGGAAGAGGAAGAAATTGCTGCTCAGGTCAGGAATTCTTCCAAGAAGAAGTTGAAGGATAGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216106.6
ENST00000418170.5
ENST00000420166.5
ENST00000455359.5
ENST00000464480.1
ENST00000498325.5
CDS TCA 72 bp AGCAAGATGCAGAGAAGACAGATCACATCAAACATTTaGAGACCACAAAATCCTACCAACTGGATTGGTGAA +
Preference number: 6 (lower is better)
Translates to: SKMQRRQITSNI*RPQNPTNWIGE
Trigger: TTCACCAATCCAGTTGGTAGGATTTTGTGGTCTTCAAATGTTTGATGTGATCTGTCTTCTCTGCATCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498325.5