RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HMGXB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000113716

Ensembl transcript IDs: ENST00000502717.6, ENST00000503427.5, ENST00000510472.1, ENST00000513318.1, ENST00000514469.1, ENST00000613459.4

Found 834 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTaGATAGCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGA +
Preference number: 1 (lower is better)
Translates to: AVRGPPHRRPLLQVP*IALPQARALLWLER
Trigger: TCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR CCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTaGTCAGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTT +
Preference number: 1 (lower is better)
Translates to: TEDPGSHHAQGMEAL*SVPAVRGPPHRRPL
Trigger: AAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR GCA 90 bp GGTGCTGCAGCTTCTCTTCACTGTAGGAGCCAATCTCATCAAGCTTaGAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCACTGCCACTGC +
Preference number: 1 (lower is better)
Translates to: GAAASLHCRSQSHQA*RCPPGAASPRHCHC
Trigger: GCAGTGGCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTGGCTCCTACAGTGAAGAGAAGCTGCAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR TCA 90 bp AAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTaGGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTG +
Preference number: 1 (lower is better)
Translates to: KRFPGTTPDPWRVEN*GPWVPPCSGNGSSL
Trigger: CAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR TCA 90 bp CCACACCACAGATGCCACAGATCATGTCATTGTAGTCTCGGACAGTaGGGCACTCAAAGGCCCAATAGCCATTGCACAGCAGCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: PHHRCHRSCHCSLGQ*GTQRPNSHCTAAPA
Trigger: TGCAGGAGCTGCTGTGCAATGGCTATTGGGCCTTTGAGTGCCTCACTGTCCGAGACTACAATGACATGATCTGTGGCATCTGTGGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR CCA 90 bp TCAGTGCTAGCACATTCTCTTCACTCCTCTGAGCCATTTCCACTTTaGGGGCCACACCACAGATGCCACAGATCATGTCATTGTAGTCTC +
Preference number: 1 (lower is better)
Translates to: SVLAHSLHSSEPFPL*GPHHRCHRSCHCSL
Trigger: GAGACTACAATGACATGATCTGTGGCATCTGTGGTGTGGCCCCCAAAGTGGAAATGGCTCAGAGGAGTGAAGAGAATGTGCTAGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR GCA 90 bp AATAACAGACGCATCAAATTTGGTGATAGGGATGCTGGCAGGAAATaGCACCTGCTCAATCACCTCTGTCTCCATCGTGGCCCAAAAGTC +
Preference number: 1 (lower is better)
Translates to: NNRRIKFGDRDAGRK*HLLNHLCLHRGPKV
Trigger: GACTTTTGGGCCACGATGGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGCCAGCATCCCTATCACCAAATTTGATGCGTCTGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR CCA 90 bp TTTGTCTTTCTCAGTGTTGACGACCACAGCTCCTCTCATGAGTGGTaGGAAGAAGGGGGCAATAACAGACGCATCAAATTTGGTGATAGG +
Preference number: 1 (lower is better)
Translates to: FVFLSVDDHSSSHEW*EEGGNNRRIKFGDR
Trigger: CCTATCACCAAATTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR CCA 90 bp GTTTTTGTCTTTCTCAGTGTTGACGACCACAGCTCCTCTCATGAGTaGTGGGAAGAAGGGGGCAATAACAGACGCATCAAATTTGGTGAT +
Preference number: 1 (lower is better)
Translates to: VFVFLSVDDHSSSHE*WEEGGNNRRIKFGD
Trigger: ATCACCAAATTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR GCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCAACCGTGTCCCCCAAGTaGTCTCTCGGGGCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTATVSPK*SLGARR
Trigger: TCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGT...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR CAA 90 bp GGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTaGAGAACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAA +
Preference number: 2 (lower is better)
Translates to: GARRGFLVPLLTPGG*RTEDPGSHHAQGME
Trigger: TTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR-3UTR GCA 90 bp CATCAAGCTTGCAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCACTGCCACTGCGGGCCACACCACAGATaGCACAGATCATGTCATTGT +
Preference number: 2 (lower is better)
Translates to: HQACRCPPGAASPRHCHCGPHHR*HRSCHC
Trigger: ACAATGACATGATCTGTGGCATCTGTGGTGTGGCCC...GCAGTGGCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCTTCTGCAGGTCCCCTaGATAGCTCTGCCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYLLQVP*IALPQA
Trigger: TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAG...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR-3UTR CCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTTCTGCAGGTCCCCTaGATAGCTCTGCCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGLLQVP*IALPQA
Trigger: TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAG...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR-3UTR GCA 90 bp GGATTCCACACTGCCTTAGCAGGTGCTGCAGCTTCTCTTCACTGTAGGAGCCAAGCCTCACCAAGGCACTaGCACTGCCAGGTACTGGCT +
Preference number: 2 (lower is better)
Translates to: GFHTALAGAAASLHCRSQASPRH*HCQVLA
Trigger: AGCCAGTACCTGGCAGTGGCAGTGCCTTGGTGAGGC...TTGGCTCCTACAGTGAAGAGAAGCTGCAGCACCTGCTAAGGCAGTGTGGAATCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCTATGGCTTGAGAGATaGTGTAGTCCCTGTACAACA +
Preference number: 2 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLLWLER*CSPCTT
Trigger: TGTTGTACAGGGACTACACCATCTCTCAAGCCATAG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGCAAGGGCCTTACTATaGCTTGAGAGATGGTGTAGT +
Preference number: 2 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPARALL*LERWCS
Trigger: ACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR-3UTR CCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACGGAATGGAAGCTCTTTaGTCAGTCCCAGCAGTCAGA +
Preference number: 2 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDGMEAL*SVPAVR
Trigger: TCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCC...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR CAA 90 bp CTGCCAGGTACTGGCTGCACATCCAGGTTTTTGTCTTTCTCAGTGTaGACGACCACAGCTCCTCTCATGAGTGGTGGGAAGAAGGGGGCA +
Preference number: 2 (lower is better)
Translates to: LPGTGCTSRFLSFSV*TTTAPLMSGGKKGA
Trigger: TGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR GCA 90 bp GTGATAGGGATGCTGGCAGGAAATGCCACCTGCTCAATCACCTCTGTCTCCATCAGGCCCAATAGCCATTaGACAGCAGCTCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: VIGMLAGNATCSITSVSIRPNSH*TAAPAA
Trigger: AGCTGCAGGAGCTGCTGTGCAATGGCTATTGGGCCT...GATGGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGCCAGCATCCCTATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR CAA 90 bp ACCAAGGCACTGCCACTGCCAGGTACTGGCTGCACATCCAGGTTTTaGTCTTTCTCAGTGTTGACGACCACAGCTCCTCTCATGAGTGGT +
Preference number: 2 (lower is better)
Translates to: TKALPLPGTGCTSRF*SFSVLTTTAPLMSG
Trigger: ACCACTCATGAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGCAGTGCCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR CCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCCTATGGCTTGAGAGATaGTGTAGTCCCTGTACAACA +
Preference number: 2 (lower is better)
Translates to: MLREWKLFGQSQQSEALPLWLER*CSPCTT
Trigger: TGTTGTACAGGGACTACACCATCTCTCAAGCCATAG...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGCAAGGGCCTTACTATaGCTTGAGAGATGGTGTAGT +
Preference number: 2 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYARALL*LERWCS
Trigger: ACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR-3UTR CCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACACCATGCTCAGGGAATaGAAGCTCTTTGGTCAGTCC +
Preference number: 2 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDTMLRE*KLFGQS
Trigger: GGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR-3UTR CCA 90 bp CCTGCTCAATCACCTCTGTCTCCATCGTGGCCCAAAAGTCCTCCACATTTACCTGAGCCATTTCCACTTTaGGGGCCACACCACAGATGC +
Preference number: 2 (lower is better)
Translates to: PAQSPLSPSWPKSPPHLPEPFPL*GPHHRC
Trigger: GCATCTGTGGTGTGGCCCCCAAAGTGGAAATGGCTC...AGGTAAATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGATTGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGGAATGGAAGCTCTTTaGTCAGTCCCAGCAGTCAGA +
Preference number: 2 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLGMEAL*SVPAVR
Trigger: TCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCC...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR CAA 90 bp CTCATGAGTGGTGGGAAGAAGGGGGCAATAACAGACGCATCAAATTaGGTGATAGGGATGCTGGCAGGAAATGCCACCTGCTCAATCACC +
Preference number: 2 (lower is better)
Translates to: LMSGGKKGAITDASN*VIGMLAGNATCSIT
Trigger: GGTGATTGAGCAGGTGGCATTTCCTGCCAGCATCCCTATCACCAAATTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR GCA 90 bp ACTGCCAGGTACTGGCTGCACATCCAGGTTTTTGTCTTTCTCAGTGTTGACGACAGAGTCTTCTCTGTCTaGTCCTGCACCGACTTCAGA +
Preference number: 2 (lower is better)
Translates to: TARYWLHIQVFVFLSVDDRVFSV*SCTDFR
Trigger: TCTGAAGTCGGTGCAGGAGCAGACAGAGAAGACTCT...GTCGTCAACACTGAGAAAGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR TCA 90 bp GTGATAGGGATGCTGGCAGGAAATGCCACCTGCTCAATCACCTCTGTCTCCATCTCTCCGAGCTTGATCTaGTTTCTGATTGCAAAAAGC +
Preference number: 2 (lower is better)
Translates to: VIGMLAGNATCSITSVSISPSLI*FLIAKS
Trigger: GCTTTTTGCAATCAGAAATCAGATCAAGCTCGGAGA...GATGGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGCCAGCATCCCTATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR CCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCACTATGGCTTGAGAGATaGTGTAGTCCCTGTACAACA +
Preference number: 2 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSLWLER*CSPCTT
Trigger: TGTTGTACAGGGACTACACCATCTCTCAAGCCATAG...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR CCA 72 bp GGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTaGATAGCTCTGCCTCAGGCAAGGGCCTTACTATGG +
Preference number: 3 (lower is better)
Translates to: GPPHRRPLLQVP*IALPQARALLW
Trigger: CCATAGTAAGGCCCTTGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR TCA 72 bp CCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTaGGGACCCTGGGTCCCACCATGCTCAGGGAATGGA +
Preference number: 3 (lower is better)
Translates to: PGTTPDPWRVEN*GPWVPPCSGNG
Trigger: TCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR CCA 72 bp GAACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATaGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: ELRTLGPTMLRE*KLFGQSQQSEA
Trigger: GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR-3UTR CAA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACGGGAATGGAAGCTCTTaGGTCAGTCCCAGCAGTCAG +
Preference number: 3 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDGNGSS*VSPSSQ
Trigger: CTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCC...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR GCA 72 bp GCTTCTCTTCACTGTAGGAGCCAATCTCATCAAGCTTaGAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCAC +
Preference number: 3 (lower is better)
Translates to: ASLHCRSQSHQA*RCPPGAASPRH
Trigger: GTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTGGCTCCTACAGTGAAGAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR CAA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGGGAATGGAAGCTCTTaGGTCAGTCCCAGCAGTCAG +
Preference number: 3 (lower is better)
Translates to: THQLRAFPSASPPLNIPCGNGSS*VSPSSQ
Trigger: CTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR CCA 72 bp CCCTGGATAGCTCTGCCTCAGGCAAGGGCCTTACTATaGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCC +
Preference number: 3 (lower is better)
Translates to: PWIALPQARALL*LERWCSPCTTA
Trigger: GGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGCTATCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR GCA 72 bp CGCATCAAATTTGGTGATAGGGATGCTGGCAGGAAATaGCACCTGCTCAATCACCTCTGTCTCCATCGTGGC +
Preference number: 3 (lower is better)
Translates to: RIKFGDRDAGRK*HLLNHLCLHRG
Trigger: GCCACGATGGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGCCAGCATCCCTATCACCAAATTTGATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR CAA 90 bp ACAGATGCCACAGATCATGTCATTGTAGTCTCGGACAGTGAGGCACTCAAAGGCGACTTCAGAACAACATaGATGGACACTCTGGGGTCC +
Preference number: 3 (lower is better)
Translates to: TDATDHVIVVSDSEALKGDFRTT*MDTLGS
Trigger: GGACCCCAGAGTGTCCATCAATGTTGTTCTGAAGTC...GCCTTTGAGTGCCTCACTGTCCGAGACTACAATGACATGATCTGTGGCATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR TCA 72 bp AGATGCCACAGATCATGTCATTGTAGTCTCGGACAGTaGGGCACTCAAAGGCCCAATAGCCATTGCACAGCA +
Preference number: 3 (lower is better)
Translates to: RCHRSCHCSLGQ*GTQRPNSHCTA
Trigger: TGCTGTGCAATGGCTATTGGGCCTTTGAGTGCCTCACTGTCCGAGACTACAATGACATGATCTGTGGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR CCA 72 bp CTCAGTGTTGACGACCACAGCTCCTCTCATGAGTGGTaGGAAGAAGGGGGCAATAACAGACGCATCAAATTT +
Preference number: 3 (lower is better)
Translates to: LSVDDHSSSHEW*EEGGNNRRIKF
Trigger: AAATTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGGTCGTCAACACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR CCA 72 bp TTTCTCAGTGTTGACGACCACAGCTCCTCTCATGAGTaGTGGGAAGAAGGGGGCAATAACAGACGCATCAAA +
Preference number: 3 (lower is better)
Translates to: FLSVDDHSSSHE*WEEGGNNRRIK
Trigger: TTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGGTCGTCAACACTGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR-3UTR CAA 90 bp CACACTGCCTTAGCAGGTGCTGCAGCTTCTCTTCACTGTAGGAGCCAATCTCATTGCACATCCAGGTTTTaGTCTTTCTCAGTGTTGACG +
Preference number: 3 (lower is better)
Translates to: HTALAGAAASLHCRSQSHCTSRF*SFSVLT
Trigger: CGTCAACACTGAGAAAGACAAAAACCTGGATGTGCA...ATGAGATTGGCTCCTACAGTGAAGAGAAGCTGCAGCACCTGCTAAGGCAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCAGCTTGGCCCGGCGGCTaGACGAGGGGGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTAAWPGG*TRGMAG
Trigger: GCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGC...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTCAGGCTCCTCACCGATaGCTGCCGAGGGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFQAPHR*LPRAPG
Trigger: CCCCGGGGCCCTCGGCAGGCATCGGTGAGGAGCCTG...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTGCTGGACGAGGGGGATaGCTGGCGCACTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFAGRGG*LAHSRS
Trigger: GGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGC...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGCTTGGCCCGGCGGCTaGACGAGGGGGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLAWPGG*TRGMAG
Trigger: GCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGC...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTGCGGTCGGCAGCGCGTaGCTGCATGCGACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAAVGSA*LHATPG
Trigger: GCCAGGGGTCGCATGCAGTCACGCGCTGCCGACCGC...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGGAGGAAGCTGTGGCTaGCGGCGGTGGGACGCCCCG +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPGGSCG*RRWDAP
Trigger: CGGGGCGTCCCACCGCCGGCAGCCACAGCTTCCTCC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCCAGGACCTCCACCCTaGCCCACACCGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPPGPPP*PTPQAP
Trigger: TGGGGCCTGCGGTGTGGGTCAGGGTGGAGGTCCTGG...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGGGAGGAAGCTGTGGCTaGCGGCGGTGGGACGCCCCG +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGGGSCG*RRWDAP
Trigger: CGGGGCGTCCCACCGCCGGCAGCCACAGCTTCCTCC...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTTCGGCAGCGCGTGACTaGATGCGACCCCTGGCGCAA +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFSAARD*MRPLAQ
Trigger: TTGCGCCAGGGGTCGCATGCAGTCACGCGCTGCCGA...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCACTCCTCACCGATGCCTaGCGAGGGCCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQALLTDA*RGPRGS
Trigger: TGACCCCCGGGGCCCTCGGCAGGCATCGGTGAGGAG...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTCAGGCTCCTCACCGATaGCTGCCGAGGGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPQAPHR*LPRAPG
Trigger: CCCCGGGGCCCTCGGCAGGCATCGGTGAGGAGCCTG...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCAGAGGAGCGTGCAAGCTaGGCCGCTCACATTCCCGGA +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTAEERAS*AAHIPG
Trigger: TCCGGGAATGTGAGCGGCGCAGCTTGCACGCTCCTC...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCAAGCCAGGCACTGCTCTaGCATGCCTGCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTASQALL*HACMAG
Trigger: CCCAGCCATGCAGGCATGGCAGAGCAGTGCCTGGCT...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTGGCCTGCATGGACGATaGGCCGCGTGGCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFGLHGR*AAWQSW
Trigger: CCAAGACTGCCACGCGGCGCATCGTCCATGCAGGCC...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCTTGGCCCGGCGGCTaGACGAGGGGGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSAWPGG*TRGMAG
Trigger: GCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGC...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCATCCTCTCGGCCACGCTaGGAAGCCTCCAACTCTCAC +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTASSRPR*EASNSH
Trigger: GTGAGAGTTGGAGGCTTCTCAGCGTGGCCGAGAGGA...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCACCACAGCTCCTCTCATaGGTGGTGGGAAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTAPQLLS*VVGRRG
Trigger: CCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGG...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTATGGCCGGAGGAGCGTaGAAGCTGCGCCGCTCACAT +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFMAGGA*KLRRSH
Trigger: ATGTGAGCGGCGCAGCTTGCACGCTCCTCCGGCCAT...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCCCTGGGCAGTCCCATaGTGCTGCCTCGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAPWAVP*CCLAPR
Trigger: ACGTGGGGCGAGGCAGCAGCATGGGACTGCCCAGGG...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTACTGCATGCGACCCCTaGCGCAAGCGCAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFTACDP*RKRNSP
Trigger: TGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGT...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGCAGCAACAAGGAAGTaGAGGCGAGGGCTCGCGCGC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLAATRK*RRGLAR
Trigger: GCGCGCGAGCCCTCGCCTCCACTTCCTTGTTGCTGC...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCCATGCCTGCATGGCTaGGCACTGTCTCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLPCLHG*ALSPGQ
Trigger: CTGCCCCGGAGACAGTGCCCAGCCATGCAGGCATGG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCACTCACCAGGGCCAGATaGCTGTTGAATGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTALTRAR*LLNGLA
Trigger: GGCCAGCCCATTCAACAGCCATCTGGCCCTGGTGAG...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCACATTGTCGAAGGCAATaGGCCGCTGGCGGACACCGT +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTAHCRRQ*AAGGHR
Trigger: ACGGTGTCCGCCAGCGGCCCATTGCCTTCGACAATG...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGCGGTCGGCAGCGCGTaGCTGCATGCGACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALAVGSA*LHATPG
Trigger: GCCAGGGGTCGCATGCAGTCACGCGCTGCCGACCGC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTCAGTTGTCCCCAGAGTaGCCTCAGGCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFQLSPE*PQAAHH
Trigger: GTGGTGTGCAGCCTGAGGTCACTCTGGGGACAACTG...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCTCACCGATGCCTaGCGAGGGCCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEALLTDA*RGPRGS
Trigger: TGACCCCCGGGGCCCTCGGCAGGCATCGGTGAGGAG...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGATGGCCGGAGGAGCGTaGAAGCTGCGCCGCTCACAT +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLMAGGA*KLRRSH
Trigger: ATGTGAGCGGCGCAGCTTGCACGCTCCTCCGGCCAT...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCAAGCGTGGGAGGATCTTaGGGAAACCTGGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTASVGGS*GNLGCP
Trigger: CGGACATCCCAGGTTTCCGCAAGATCCTCCCACGCT...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACAGCACCCTGGGCTGGTaGATGTCCCATGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNSTLGW*MSHGPG
Trigger: GCCGGGGCCATGGGACATGCACCAGCCCAGGGTGCT...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTCCCTGGGCAGTCCCATaGTGCTGCCTCGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSPWAVP*CCLAPR
Trigger: ACGTGGGGCGAGGCAGCAGCATGGGACTGCCCAGGG...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTTCCCCAACCTGGGGGTaGGGCACAGCCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIASPTWG*GTARLP
Trigger: TGGAAGCCTGGCTGTGCCCCACCCCCAGGTTGGGGA...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTAGGAGCACCCTGGGCTaGTGCATGTCCCATGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPRSTLG*CMSHGP
Trigger: GGGGCCATGGGACATGCACCAGCCCAGGGTGCTCCT...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTAGTGTGGACTGGCGCTaGATCTCCCTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFSVDWR*ISLWAV
Trigger: CACAGCCCAGAGGGAGATCCAGCGCCAGTCCACACT...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCACTTCTGCAGGTCCCCTaGATAGCTCTGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTALLQVP*IALPQA
Trigger: TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAG...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCACTCAGTACCATCATATaGTGCGTCCATGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTALSTII*CVHGRR
Trigger: CCTCCGGCCATGGACGCATCATATGATGGTACTGAG...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCACTGGCTGAGGATCTCTaGGGTGGCAATCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTALAEDL*GGNLLY
Trigger: GTACAGGAGATTGCCACCTCAGAGATCCTCAGCCAG...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTAGCACACAGGGCCACTaGCGTGGCCATATCTACCAC +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFSTQGH*RGHIYH
Trigger: GTGGTAGATATGGCCACGTCAGTGGCCCTGTGTGCT...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCACATGGGCATCGGAGATaGTCACTTCCTCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTAHGHRR*SLPPTH
Trigger: GTGAGTGGGAGGAAGTGATCATCTCCGATGCCCATG...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR GCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCACCGGTTTGGCGGCTaGACCGGCAGTAGCGGCACA +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDHRFGG*TGSSGT
Trigger: TGTGCCGCTACTGCCGGTGCAGCCGCCAAACCGGTG...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCTCCTCACCGATGCCTaGCGAGGGCCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALLLTDA*RGPRGS
Trigger: TGACCCCCGGGGCCCTCGGCAGGCATCGGTGAGGAG...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAGAGGAGCGTGCAAGCTaGGCCGCTCACATTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAEERAS*AAHIPG
Trigger: TCCGGGAATGTGAGCGGCGCAGCTTGCACGCTCCTC...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGTCTCCCTCTGGGCTGTaGTCAGGGGCTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLSPSGL*SGALWH
Trigger: ATGCCACAGAGCCCCTGAGCACAGCCCAGAGGGAGA...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCCGGGCACTGCTGTaGGGCGTTCAGGTAACAGGG +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDPRALL*GVQVTG
Trigger: CCCTGTTACCTGAACGCCCCACAGCAGTGCCCGGGG...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTAGCCCAGCCCTAGCTTaGGAGCGGACCCACACGAAC +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPSPALA*ERTHTN
Trigger: GTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCT...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGACGAGGGGGATGGCTaGCGCACTCGCGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCDEGDG*RTRAPR
Trigger: GCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGGACGAGGGGGATGGCTaGCGCACTCGCGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLDEGDG*RTRAPR
Trigger: GCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTC...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGCTGGACGAGGGGGATaGCTGGCGCACTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYAGRGG*LAHSRS
Trigger: GGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGCCATGCCTGCATGGCTaGGCACTGTCTCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGPCLHG*ALSPGQ
Trigger: CTGCCCCGGAGACAGTGCCCAGCCATGCAGGCATGG...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTCTGGTGCATGTCCCATaGCCCCGGCGGGTATATGTA +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFLVHVP*PRRVYV
Trigger: TACATATACCCGCCGGGGCCATGGGACATGCACCAG...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGAGCAGGGAGTGGACTaGAGGTACTTGTCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLEQGVD*RYLSPR
Trigger: CCGAGGGGACAAGTACCTCCAGTCCACTCCCTGCTC...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGGAAAAGGCCTGCCTaGCCCTGGGCAGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPGKRPA*PWAVPC
Trigger: GCATGGGACTGCCCAGGGCCAGGCAGGCCTTTTCCC...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCTCACCAGGGCCAGATaGCTGTTGAATGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLLTRAR*LLNGLA
Trigger: GGCCAGCCCATTCAACAGCCATCTGGCCCTGGTGAG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGAGCTGCAGTGTGGACTaGCGCTGGATCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLSCSVD*RWISLW
Trigger: CCAGAGGGAGATCCAGCGCCAGTCCACACTGCAGCT...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCAGTTTGCTGTCCACGATaGAGGCCAGGATGGTTGCGT +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTAVCCPR*RPGWLR
Trigger: ACGCAACCATCCTGGCCTCCATCGTGGACAGCAAAC...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCACTCCTGTACAGCACCTaGCTGGGTAAGGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQALLYST*LGKGSH
Trigger: GTGGGAGCCCTTACCCAGTCAGGTGCTGTACAGGAG...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTCCAGGACCTCCACCCTaGCCCACACCGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCPGPPP*PTPQAP
Trigger: TGGGGCCTGCGGTGTGGGTCAGGGTGGAGGTCCTGG...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCGGACCCACACGAACTaGTCAAAGGCTTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPRTHTN*SKAWSG
Trigger: CCCGCTCCAAGCCTTTGAGCAGTTCGTGTGGGTCCG...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCAGCGCGTGACTGCATaGGACCCCTGGCGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALQRVTA*DPWRKR
Trigger: GCGCTTGCGCCAGGGGTCGCATGCAGTCACGCGCTG...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCAGGCTCCTCACCGATaGCTGCCGAGGGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLQAPHR*LPRAPG
Trigger: CCCCGGGGCCCTCGGCAGGCATCGGTGAGGAGCCTG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCTCTGCCATGCCTaGATGGCTGGGCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIALLCHA*MAGHCL
Trigger: GAGACAGTGCCCAGCCATGCAGGCATGGCAGAGCAG...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGCACTGCTCTGCCATaGCTGCATGGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPGTALP*LHGWAL
Trigger: CAGTGCCCAGCCATGCAGGCATGGCAGAGCAGTGCC...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACGGCACTGCTCTGCCATaGCTGCATGGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDGTALP*LHGWAL
Trigger: CAGTGCCCAGCCATGCAGGCATGGCAGAGCAGTGCC...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCAGCACCCTGGGCTGGTaGATGTCCCATGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVSTLGW*MSHGPG
Trigger: GCCGGGGCCATGGGACATGCACCAGCCCAGGGTGCT...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCCTGGGCAGTCCCATaGTGCTGCCTCGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGPWAVP*CCLAPR
Trigger: ACGTGGGGCGAGGCAGCAGCATGGGACTGCCCAGGG...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAGCCTCACCAAGGCACTaGCACTGCCAGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAASPRH*HCQVLA
Trigger: AGCCAGTACCTGGCAGTGGCAGTGCCTTGGTGAGGC...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGGCTTATTCTGCCACTaGGGCCACCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLGLFCH*GHLLFL
Trigger: GAGGAAGAGGAGGTGGCCGCAGTGGCAGAATAAGCC...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTACCGTGTCCCCCAAGTaGTCTCTCGGGGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIATVSPK*SLGARR
Trigger: TCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGT...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTACTGCATGCGACCCCTaGCGCAAGCGCAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSTACDP*RKRNSP
Trigger: TGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGT...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGGACGAGGGGGATGGCTaGCGCACTCGCGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWDEGDG*RTRAPR
Trigger: GCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTC...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTTCTCCGGGGCAGTGTTaGACACAAGAGGAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFSPGQC*TQEEVL
Trigger: AAGGACCTCCTCTTGTGTCCAACACTGCCCCGGAGA...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGTGTACAGCACCTGACTaGGTAAGGGCTCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLCTAPD*VRAPTS
Trigger: GGAGGTGGGAGCCCTTACCCAGTCAGGTGCTGTACA...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTCCCCAACCTGGGGGTaGGGCACAGCCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEASPTWG*GTARLP
Trigger: TGGAAGCCTGGCTGTGCCCCACCCCCAGGTTGGGGA...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCCCCTCGGATGGTGTTaGTACGTCTGCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLPLGWC*YVCSRT
Trigger: AGTCCTGGAGCAGACGTACCAACACCATCCGAGGGG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGAGCAGGGAGTGGACTaGAGGTACTTGTCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPEQGVD*RYLSPR
Trigger: CCGAGGGGACAAGTACCTCCAGTCCACTCCCTGCTC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCGGGAAAAGGCCTGCCTaGCCCTGGGCAGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAGKRPA*PWAVPC
Trigger: GCATGGGACTGCCCAGGGCCAGGCAGGCCTTTTCCC...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAAGTGTGGACTGGCGCTaGATCTCCCTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQASVDWR*ISLWAV
Trigger: CACAGCCCAGAGGGAGATCCAGCGCCAGTCCACACT...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACGCAGCAGCTGCAGTGTaGACTGGCGCTGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNAAAAV*TGAGSP
Trigger: GGGAGATCCAGCGCCAGTCCACACTGCAGCTGCTGC...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCACTGTCTGCAGACGGCTaGCTGTCAGCAGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQALSADG*LSAAST
Trigger: AGTGCTGGCTGCTGACAGCCAGCCGTCTGCAGACAG...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCTGTCTGCAGACGGCTaGCTGTCAGCAGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPLSADG*LSAAST
Trigger: AGTGCTGGCTGCTGACAGCCAGCCGTCTGCAGACAG...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTGAGCCATTTCCACTTTaGGGGCCACACCACAGATGC +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFEPFPL*GPHHRC
Trigger: GCATCTGTGGTGTGGCCCCCAAAGTGGAAATGGCTC...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCATTGCAGGTGCCCTCCTaGAGCAGCCTCACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQALQVPS*SSLTKA
Trigger: TGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAA...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTACCTGTGAAGTGACGTaGGGGCCGTATAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFTCEVT*GPYSSS
Trigger: GCTAGAGCTATACGGCCCCCACGTCACTTCACAGGT...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGTGGGGTCACCAGGATTaGGCTGTAGGCCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLWGHQD*AVGLHG
Trigger: TCCATGCAGGCCTACAGCCCAATCCTGGTGACCCCA...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGAAGGCAATGGGCCGCTaGCGGACACCGTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLKAMGR*RTPFGL
Trigger: CAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTT...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCTTCTGCAGGTCCCCTaGATAGCTCTGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLLLQVP*IALPQA
Trigger: TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCGCGATATGGGGTCCTaGAGGGCAAGAATAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLRDMGS*RARIGA
Trigger: TGCTCCTATTCTTGCCCTTCAGGACCCCATATCGCG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCTCAGTACCATCATATaGTGCGTCCATGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLLSTII*CVHGRR
Trigger: CCTCCGGCCATGGACGCATCATATGATGGTACTGAG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACTCCTCTCGGCCACGCTaGGAAGCCTCCAACTCTCAC +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNSSRPR*EASNSH
Trigger: GTGAGAGTTGGAGGCTTCTCAGCGTGGCCGAGAGGA...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCTGGCTGAGGATCTCTaGGGTGGCAATCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLLAEDL*GGNLLY
Trigger: GTACAGGAGATTGCCACCTCAGAGATCCTCAGCCAG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTTGTAGTCTCGGACAGTaGGGCACTCAAAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFCSLGQ*GTQRPN
Trigger: ATTGGGCCTTTGAGTGCCTCACTGTCCGAGACTACA...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTAGCACACAGGGCCACTaGCGTGGCCATATCTACCAC +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIASTQGH*RGHIYH
Trigger: GTGGTAGATATGGCCACGTCAGTGGCCCTGTGTGCT...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCCAGGACCTCCACCCTaGCCCACACCGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLPGPPP*PTPQAP
Trigger: TGGGGCCTGCGGTGTGGGTCAGGGTGGAGGTCCTGG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCAGCCAGGCACTGCTCTaGCATGCCTGCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPSQALL*HACMAG
Trigger: CCCAGCCATGCAGGCATGGCAGAGCAGTGCCTGGCT...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTATGGGCTGGCCCAGCTaGTTCAGTGTGCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAMGWPS*FSVLGF
Trigger: GAAGCCAAGCACACTGAAGCAGCTGGGCCAGCCCAT...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTGTCCTTGGAGTCTTCTaGCCCAAAGGGGATTCCACA +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFVLGVF*PKGDST
Trigger: TGTGGAATCCCCTTTGGGGCAGAAGACTCCAAGGAC...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGCAGCCTGGCTTATTCTaGCACTGCGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGQPGLF*HCGHLL
Trigger: GAGGAGGTGGCCGCAGTGGCAGAATAAGCCAGGCTG...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCCCTGGGTCCCACCATaGTCAGGGAATGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPPWVPP*SGNGSS
Trigger: AGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGG...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACAGCCACGTCGGGCGCTaGGAAGCCTACAATACCACC +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNSHVGR*EAYNTT
Trigger: GGTGGTATTGTAGGCTTCCCAGCGCCCGACGTGGCT...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503427.5
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATCTTGCGGAAACCTaGGATGTCCGGAACCACAGC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLDLAET*DVRNHS
Trigger: GCTGTGGTTCCGGACATCCCAGGTTTCCGCAAGATC...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCTCTGCCATGCCTGCATaGCTGGGCACTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPSAMPA*LGTVSG
Trigger: CCCGGAGACAGTGCCCAGCCATGCAGGCATGGCAGA...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTGATGAACTGTGTGGCTaGTGCAGAGGAGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFDELCG*CRGATL
Trigger: GAGAGTAGCTCCTCTGCACCAGCCACACAGTTCATC...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGGTGCATGTCCCATaGCCCCGGCGGGTATATGTA +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIALVHVP*PRRVYV
Trigger: TACATATACCCGCCGGGGCCATGGGACATGCACCAG...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACAGGAGCACCCTGGGCTaGTGCATGTCCCATGGCCCC +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYRSTLG*CMSHGP
Trigger: GGGGCCATGGGACATGCACCAGCCCAGGGTGCTCCT...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCACCCCTCGGATGGTGTTaGTACGTCTGCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAPLGWC*YVCSRT
Trigger: AGTCCTGGAGCAGACGTACCAACACCATCCGAGGGG...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACGAGCAGGGAGTGGACTaGAGGTACTTGTCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNEQGVD*RYLSPR
Trigger: CCGAGGGGACAAGTACCTCCAGTCCACTCCCTGCTC...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTTCGCCCCACGTTAACTaGGGCTGGCAAAATTGCTCT +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFSPHVN*GWQNCS
Trigger: AGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGA...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTCTCACCAGGGCCAGATaGCTGTTGAATGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPLTRAR*LLNGLA
Trigger: GGCCAGCCCATTCAACAGCCATCTGGCCCTGGTGAG...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACAGCTGCAGTGTGGACTaGCGCTGGATCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNSCSVD*RWISLW
Trigger: CCAGAGGGAGATCCAGCGCCAGTCCACACTGCAGCT...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTTGCAGGGCCAGACAATaGGGGTTCAGACACATCTTC +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFCRARQ*GFRHIF
Trigger: GAAGATGTGTCTGAACCCCCATTGTCTGGCCCTGCA...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACTTGCAGGTGCCCTCCTaGAGCAGCCTCACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDLQVPS*SSLTKA
Trigger: TGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAA...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTCTGGTTAGTCAGCTCTaGGTAGCAGAGGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFLVSQL*VAEVST
Trigger: TGTGCTGACCTCTGCTACCCAGAGCTGACTAACCAG...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCTGGCGGACACCGTTTaGTTTGCTGTCCACGATGGA +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLLADTV*FAVHDG
Trigger: TCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTCATTGTCGAAGGCAATaGGCCGCTGGCGGACACCGT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSHCRRQ*AAGGHR
Trigger: ACGGTGTCCGCCAGCGGCCCATTGCCTTCGACAATG...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTAGGCGGCTCCAGTCGTaGCAGCAGCAACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPRRLQS*QQQQGS
Trigger: ACTTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCT...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTCCTCTCGGCCACGCTaGGAAGCCTCCAACTCTCAC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEASSRPR*EASNSH
Trigger: GTGAGAGTTGGAGGCTTCTCAGCGTGGCCGAGAGGA...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTGGGGACATCTGGTTCTaGGCCACACATAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAGDIWF*ATHSSS
Trigger: GCTAGAGCTATGTGTGGCTCAGAACCAGATGTCCCC...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCAGTTGTCCCCAGAGTaGCCTCAGGCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAQLSPE*PQAAHH
Trigger: GTGGTGTGCAGCCTGAGGTCACTCTGGGGACAACTG...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCCCACAGCTCCTCTCATaGGTGGTGGGAAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPPQLLS*VVGRRG
Trigger: CCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGG...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTTTACCACCTGTGAAGTaGCGTGGGGGCCGTATAGCT +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIALPPVK*RGGRIA
Trigger: AGCTATACGGCCCCCACGTCACTTCACAGGTGGTAA...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGAGCACACAGGGCCACTaGCGTGGCCATATCTACCAC +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGSTQGH*RGHIYH
Trigger: GTGGTAGATATGGCCACGTCAGTGGCCCTGTGTGCT...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCACCTCTGTCTCTGTCTTaGTCTGAGCAACCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAPLSLS*SEQPQG
Trigger: GCCTTGGGGTTGCTCAGATCAAGACAGAGACAGAGG...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGTAAGGCGAACGGACTaGTTCCGGCCAGAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYVRRTD*FRPEVP
Trigger: CGGGACCTCTGGCCGGAAGCAGTCCGTTCGCCTTAC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCAGCGCGTGACTGCATaGGACCCCTGGCGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLQRVTA*DPWRKR
Trigger: GCGCTTGCGCCAGGGGTCGCATGCAGTCACGCGCTG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGTCGGCAGCGCGTGACTaGATGCGACCCCTGGCGCAA +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLSAARD*MRPLAQ
Trigger: TTGCGCCAGGGGTCGCATGCAGTCACGCGCTGCCGA...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCACCGGTTTGGCGGCTaGACCGGCAGTAGCGGCACA +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDHRFGG*TGSSGT
Trigger: TGTGCCGCTACTGCCGGTGCAGCCGCCAAACCGGTG...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGAGGAGCGTGCAAGCTaGGCCGCTCACATTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALEERAS*AAHIPG
Trigger: TCCGGGAATGTGAGCGGCGCAGCTTGCACGCTCCTC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCAAACCACAGCAGTCAGTaGAGAGAGCTTAGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTANHSSQ*RELRVR
Trigger: CCTAACTCTAAGCTCTCTGCACTGACTGCTGTGGTT...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTAGCGTGGGAGGATCTTaGGGAAACCTGGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPSVGGS*GNLGCP
Trigger: CGGACATCCCAGGTTTCCGCAAGATCCTCCCACGCT...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTGCTCTGCCATGCCTaGATGGCTGGGCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEALLCHA*MAGHCL
Trigger: GAGACAGTGCCCAGCCATGCAGGCATGGCAGAGCAG...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGGCACTGCTCTGCCATaGCTGCATGGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALGTALP*LHGWAL
Trigger: CAGTGCCCAGCCATGCAGGCATGGCAGAGCAGTGCC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGAGCACCCTGGGCTGGTaGATGTCCCATGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWSTLGW*MSHGPG
Trigger: GCCGGGGCCATGGGACATGCACCAGCCCAGGGTGCT...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTATGGGCTGGCCCAGCTaGTTCAGTGTGCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPMGWPS*FSVLGF
Trigger: GAAGCCAAGCACACTGAAGCAGCTGGGCCAGCCCAT...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTTACAAGAGGGATTCTTaGACTTTCCCCGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFYKRDS*TFPGLL
Trigger: CAAGAGGCCGGGGAAAGTGCAAGAATCCCTCTTGTA...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCACTTTGCGCAGCAGCTaGAGTGTGGACTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPTLRSS*SVDWRW
Trigger: CCAGCGCCAGTCCACACTGCAGCTGCTGCGCAAAGT...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTGGGCAGTCACTGTCTaGAGACGGCTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAWAVTV*RRLAVS
Trigger: GCTGACAGCCAGCCGTCTGCAGACAGTGACTGCCCA...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGCAGGAAATGCCACCTaGTCAATCACCTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLAGNAT*SITSVS
Trigger: GGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGC...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATGCTGGCAGGAAATaGCACCTGCTCAATCACCTC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLDAGRK*HLLNHL
Trigger: GAGGTGATTGAGCAGGTGGCATTTCCTGCCAGCATC...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTGGCCTGCATGGACGATaGGCCGCGTGGCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCGLHGR*AAWQSW
Trigger: CCAAGACTGCCACGCGGCGCATCGTCCATGCAGGCC...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTGATGGTTGCGTAAGGTaGCAATTCAGGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIADGCVR*QFRAQG
Trigger: GCCCTGTGCCCTGAATTGGCACCTTACGCAACCATC...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGGAGGCCAGGATGGTTaGGTAAGGTGCCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPGGQDG*VRCQFR
Trigger: CCTGAATTGGCACCTTACGCAACCATCCTGGCCTCC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTGGACACCGTTTGGTTTaGTGTCCACGATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAGHRLV*CPRWRP
Trigger: TGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCC...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTCCCCGGGCACTGCTGTaGGGCGTTCAGGTAACAGGG +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCPRALL*GVQVTG
Trigger: CCCTGTTACCTGAACGCCCCACAGCAGTGCCCGGGG...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGCAGCAACAAGGAAGTaGAGGCGAGGGCTCGCGCGC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCAATRK*RRGLAR
Trigger: GCGCGCGAGCCCTCGCCTCCACTTCCTTGTTGCTGC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGATCTTGCGGAAACCTaGGATGTCCGGAACCACAGC +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPDLAET*DVRNHS
Trigger: GCTGTGGTTCCGGACATCCCAGGTTTCCGCAAGATC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTCCATGCCTGCATGGCTaGGCACTGTCTCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCPCLHG*ALSPGQ
Trigger: CTGCCCCGGAGACAGTGCCCAGCCATGCAGGCATGG...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACTCTGCCATGCCTGCATaGCTGGGCACTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYSAMPA*LGTVSG
Trigger: CCCGGAGACAGTGCCCAGCCATGCAGGCATGGCAGA...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCTCTGCCATGCCTGCATaGCTGGGCACTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVSAMPA*LGTVSG
Trigger: CCCGGAGACAGTGCCCAGCCATGCAGGCATGGCAGA...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTTGTACAGCACCTGACTaGGTAAGGGCTCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSCTAPD*VRAPTS
Trigger: GGAGGTGGGAGCCCTTACCCAGTCAGGTGCTGTACA...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTTGTACAGCACCTGACTaGGTAAGGGCTCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPCTAPD*VRAPTS
Trigger: GGAGGTGGGAGCCCTTACCCAGTCAGGTGCTGTACA...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGAGGAGCACCCTGGGCTaGTGCATGTCCCATGGCCCC +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLRSTLG*CMSHGP
Trigger: GGGGCCATGGGACATGCACCAGCCCAGGGTGCTCCT...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACCCCCTCGGATGGTGTTaGTACGTCTGCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNPLGWC*YVCSRT
Trigger: AGTCCTGGAGCAGACGTACCAACACCATCCGAGGGG...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCAGCAAAATTGCTCTCATaGGTCTTGCTGCAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTAAKLLS*VLLQPV
Trigger: TACTGGCTGCAGCAAGACCCATGAGAGCAATTTTGC...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGATGGCTGTTGAATaGGCTGGCCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPQMAVE*AGPAAS
Trigger: TGAAGCAGCTGGGCCAGCCCATTCAACAGCCATCTG...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTAAGGCAATGGGCCGCTaGCGGACACCGTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSKAMGR*RTPFGL
Trigger: CAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTT...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCCTCACCTACTTCTCTaGGAGGAGCTACGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLPHLLL*EELRSG
Trigger: TCCTGAACGTAGCTCCTCCCAGAGAAGTAGGTGAGG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTCGCGATATGGGGTCCTaGAGGGCAAGAATAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPRDMGS*RARIGA
Trigger: TGCTCCTATTCTTGCCCTTCAGGACCCCATATCGCG...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCACACATAGCTCTAGCTaGGGGCAGCTCCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGTHSSS*GQLRSS
Trigger: GGAGGACCGGAGCTGCCCTCAGCTAGAGCTATGTGT...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCTCCTGTACAGCACCTaGCTGGGTAAGGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYLLYST*LGKGSH
Trigger: GTGGGAGCCCTTACCCAGTCAGGTGCTGTACAGGAG...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACCTGGCTGAGGATCTCTaGGGTGGCAATCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNLAEDL*GGNLLY
Trigger: GTACAGGAGATTGCCACCTCAGAGATCCTCAGCCAG...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCAGTTGTCCCCAGAGTaGCCTCAGGCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYQLSPE*PQAAHH
Trigger: GTGGTGTGCAGCCTGAGGTCACTCTGGGGACAACTG...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGTCCACAACTTTCACCTaGGAAGTCCTGTTGGATGGG +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLSTTFT*EVLLDG
Trigger: CCCATCCAACAGGACTTCTCAGGTGAAAGTTGTGGA...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTTTCCCCGGCCTCTTaGTGTAGCCAGGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEALSPAS*CSQAQI
Trigger: GATTTGGGCCTGGCTACATCAAGAGGCCGGGGAAAG...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCACAGCTCCTCTCATaGGTGGTGGGAAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGPQLLS*VVGRRG
Trigger: CCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGG...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTAGATTTTACCACCTGTaGAGTGACGTGGGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIARFYHL*SDVGAV
Trigger: TACGGCCCCCACGTCACTTCACAGGTGGTAAAATCT...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCAGAGGGTGTCACGAATaGCCACCTCACCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVRGCHE*PPHQAG
Trigger: GCCAGCCTGGTGAGGTGGTCATTCGTGACACCCTCT...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGGTAAGGCGAACGGACTaGTTCCGGCCAGAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLVRRTD*FRPEVP
Trigger: CGGGACCTCTGGCCGGAAGCAGTCCGTTCGCCTTAC...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTATGGCCGGAGGAGCGTaGAAGCTGCGCCGCTCACAT +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCMAGGA*KLRRSH
Trigger: ATGTGAGCGGCGCAGCTTGCACGCTCCTCCGGCCAT...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTAACCACAGCAGTCAGTaGAGAGAGCTTAGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFNHSSQ*RELRVR
Trigger: CCTAACTCTAAGCTCTCTGCACTGACTGCTGTGGTT...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTAGCCAGGCACTGCTCTaGCATGCCTGCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCSQALL*HACMAG
Trigger: CCCAGCCATGCAGGCATGGCAGAGCAGTGCCTGGCT...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTTGGCGTCTTAGTGACTaGTGTACCACAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPWRLSD*CTTIPG
Trigger: CCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCA...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCGCCTCACCAAGGCACTaGCACTGCCAGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVASPRH*HCQVLA
Trigger: AGCCAGTACCTGGCAGTGGCAGTGCCTTGGTGAGGC...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACAAGGGGATTCCACACTaGCTTAGCAGGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDKGIPH*LSRCCS
Trigger: GCTGCAGCACCTGCTAAGGCAGTGTGGAATCCCCTT...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCAGCCTGGCTTATTCTaGCACTGCGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVQPGLF*HCGHLL
Trigger: GAGGAGGTGGCCGCAGTGGCAGAATAAGCCAGGCTG...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGCTGGACGAGGGGGATaGCTGGCGCACTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSAGRGG*LAHSRS
Trigger: GGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGC...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGATGAACTGTGTGGCTaGTGCAGAGGAGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPDELCG*CRGATL
Trigger: GAGAGTAGCTCCTCTGCACCAGCCACACAGTTCATC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTTGTAAAGGAGCACCCTaGGCTGGTGCATGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSCKGAP*AGACPM
Trigger: CATGGGACATGCACCAGCCCAGGGTGCTCCTTTACA...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGGTAGGGCACTTAGGTaGCTTGTGCCTGGTGACATA +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPGRALR*LVPGDI
Trigger: TATGTCACCAGGCACAAGCCACCTAAGTGCCCTACC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCATCACCACAGAGCCTTTaGAAGAGACGCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQASPQSL*KRRQKP
Trigger: TGGCTTCTGGCGTCTCTTCCAAAGGCTCTGTGGTGA...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTACCACTTTTGACGACTaGCGTCTTAGTGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFTTFDD*RLSDCC
Trigger: ACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGT...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTACTTGTCCCCTCGGATaGTGTTGGTACGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPTCPLG*CWYVCS
Trigger: GGAGCAGACGTACCAACACCATCCGAGGGGACAAGT...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCATCGCCCCACGTTAACTaGGGCTGGCAAAATTGCTCT +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQASPHVN*GWQNCS
Trigger: AGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGA...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGGGGAAAAGGCCTGCCTaGCCCTGGGCAGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWGKRPA*PWAVPC
Trigger: GCATGGGACTGCCCAGGGCCAGGCAGGCCTTTTCCC...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTCAGATGGCTGTTGAATaGGCTGGCCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSQMAVE*AGPAAS
Trigger: TGAAGCAGCTGGGCCAGCCCATTCAACAGCCATCTG...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CAGCTGGCTCAGCTCCTCCGAGGTCAGAGTCTTCTCTGTCTGCTCCTGCACCGACAGATGGCTGTTGAATaGGCTGGCCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QLAQLLRGQSLLCLLLHRQMAVE*AGPAAS
Trigger: TGAAGCAGCTGGGCCAGCCCATTCAACAGCCATCTG...TCGGTGCAGGAGCAGACAGAGAAGACTCTGACCTCGGAGGAGCTGAGCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCAGATGGCTGTTGAATaGGCTGGCCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDQMAVE*AGPAAS
Trigger: TGAAGCAGCTGGGCCAGCCCATTCAACAGCCATCTG...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCAGTGTGGACTGGCGCTaGATCTCCCTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVSVDWR*ISLWAV
Trigger: CACAGCCCAGAGGGAGATCCAGCGCCAGTCCACACT...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTGCAGCAGCTGCAGTGTaGACTGGCGCTGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCAAAAV*TGAGSP
Trigger: GGGAGATCCAGCGCCAGTCCACACTGCAGCTGCTGC...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACGAGCCATTTCCACTTTaGGGGCCACACCACAGATGC +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDEPFPL*GPHHRC
Trigger: GCATCTGTGGTGTGGCCCCCAAAGTGGAAATGGCTC...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGCCACTGCCAGGTACTaGCTGCACATCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPATARY*LHIQVF
Trigger: AAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACTTGCAGGTGCCCTCCTaGAGCAGCCTCACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYLQVPS*SSLTKA
Trigger: TGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAA...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACAGCAGAGCTGGTCCTTaGAGTCTTCTGCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNSRAGP*SLLPQR
Trigger: CCTTTGGGGCAGAAGACTCCAAGGACCAGCTCTGCT...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACAGCAGAGCTGGTCCTTaGAGTCTTCTGCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDSRAGP*SLLPQR
Trigger: CCTTTGGGGCAGAAGACTCCAAGGACCAGCTCTGCT...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACACCTGTGAAGTGACGTaGGGGCCGTATAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDTCEVT*GPYSSS
Trigger: GCTAGAGCTATACGGCCCCCACGTCACTTCACAGGT...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTACCTGTGAAGTGACGTaGGGGCCGTATAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSTCEVT*GPYSSS
Trigger: GCTAGAGCTATACGGCCCCCACGTCACTTCACAGGT...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCACTGGTTAGTCAGCTCTaGGTAGCAGAGGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQALVSQL*VAEVST
Trigger: TGTGCTGACCTCTGCTACCCAGAGCTGACTAACCAG...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTGGTCCAAGAGCTCTaGGCAGGACACACTCACAGG +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEALVQEL*AGHTHR
Trigger: CCTGTGAGTGTGTCCTGCCCAGAGCTCTTGGACCAG...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTCACAGGGCCAAGGAGTaGTGCCCAGCACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCHRAKE*CPALGS
Trigger: TGACCCCAGTGCTGGGCACCACTCCTTGGCCCTGTG...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCACAGGGCCAAGGAGTaGTGCCCAGCACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDHRAKE*CPALGS
Trigger: TGACCCCAGTGCTGGGCACCACTCCTTGGCCCTGTG...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCACGATGGAGGCCAGGATaGTTGCGTAAGGTGCCAATT +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQARWRPG*LRKVPI
Trigger: AATTGGCACCTTACGCAACCATCCTGGCCTCCATCG...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTACCACCTCACCAGGCTaGCAGCTCTGTACAATGTCA +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIATTSPG*QLCTMS
Trigger: TGACATTGTACAGAGCTGCCAGCCTGGTGAGGTGGT...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAACCACCTCACCAGGCTaGCAGCTCTGTACAATGTCA +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQATTSPG*QLCTMS
Trigger: TGACATTGTACAGAGCTGCCAGCCTGGTGAGGTGGT...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTGCAAGGGCCTTACTATaGCTTGAGAGATGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFARALL*LERWCS
Trigger: ACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCACGACGTTCAAGGCCTaGCCTCAGCCTGTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVTTFKA*PQPVSV
Trigger: GACTGAGACAGGCTGAGGTCAGGCCTTGAACGTCGT...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503427.5
CDS-3UTR TCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCAGGCGGCTCCAGTCGTaGCAGCAGCAACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVRRLQS*QQQQGS
Trigger: ACTTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCT...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCCTCAGTACCATCATATaGTGCGTCCATGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPLSTII*CVHGRR
Trigger: CCTCCGGCCATGGACGCATCATATGATGGTACTGAG...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACACATAGCTCTAGCTaGGGGCAGCTCCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCTHSSS*GQLRSS
Trigger: GGAGGACCGGAGCTGCCCTCAGCTAGAGCTATGTGT...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTACACATAGCTCTAGCTaGGGGCAGCTCCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCTHSSS*GQLRSS
Trigger: GGAGGACCGGAGCTGCCCTCAGCTAGAGCTATGTGT...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCGGGGACATCTGGTTCTaGGCCACACATAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPGDIWF*ATHSSS
Trigger: GCTAGAGCTATGTGTGGCTCAGAACCAGATGTCCCC...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCGGGGACATCTGGTTCTaGGCCACACATAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAGDIWF*ATHSSS
Trigger: GCTAGAGCTATGTGTGGCTCAGAACCAGATGTCCCC...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCACATGACTGTTACCACTaGTACACTCTCCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAHDCYH*YTLPNL
Trigger: CAGGTTGGGGAGAGTGTATCAGTGGTAACAGTCATG...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGTGGTGACAGGTTGCTaGTTTCTTTTCACCACAGAG +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLVVTGC*FLFTTE
Trigger: CTCTGTGGTGAAAAGAAATCAGCAACCTGTCACCAC...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACTACATCTGGGAGTGGTaGGCTCACCTCGATAGCCTT +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNYIWEW*AHLDSL
Trigger: AAGGCTATCGAGGTGAGCTCACCACTCCCAGATGTA...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGTACATCTGGGAGTGGTaGGCTCACCTCGATAGCCTT +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGYIWEW*AHLDSL
Trigger: AAGGCTATCGAGGTGAGCTCACCACTCCCAGATGTA...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTTACATCTGGGAGTGGTaGGCTCACCTCGATAGCCTT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSYIWEW*AHLDSL
Trigger: AAGGCTATCGAGGTGAGCTCACCACTCCCAGATGTA...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGGACCTCAGCCAGCTCTaGCTCATTCTCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGDLSQL*LILRNL
Trigger: CAGATTCCTGAGAATGAGTCAGAGCTGGCTGAGGTC...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTCTGTGTAGATGTCTATaGAGCTGTGCAGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPLCRCL*SCAGPD
Trigger: GTCTGGCCCTGCACAGCTTCATAGACATCTACACAG...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTTGTAGTCTCGGACAGTaGGGCACTCAAAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSCSLGQ*GTQRPN
Trigger: ATTGGGCCTTTGAGTGCCTCACTGTCCGAGACTACA...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGAGATTTTACCACCTGTaGAGTGACGTGGGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGRFYHL*SDVGAV
Trigger: TACGGCCCCCACGTCACTTCACAGGTGGTAAAATCT...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTAGAGGGTGTCACGAATaGCCACCTCACCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCRGCHE*PPHQAG
Trigger: GCCAGCCTGGTGAGGTGGTCATTCGTGACACCCTCT...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCCTCTGTCTCTGTCTTaGTCTGAGCAACCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAPLSLS*SEQPQG
Trigger: GCCTTGGGGTTGCTCAGATCAAGACAGAGACAGAGG...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTCTGCTCTGCCATGCCTaGATGGCTGGGCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCLLCHA*MAGHCL
Trigger: GAGACAGTGCCCAGCCATGCAGGCATGGCAGAGCAG...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGAACTGTGTGGCTGGTaGAGAGGAGCTACTCTCACT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSELCGW*RGATLT
Trigger: AGTGAGAGTAGCTCCTCTGCACCAGCCACACAGTTC...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACTGGCGTCTTAGTGACTaGTGTACCACAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDWRLSD*CTTIPG
Trigger: CCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCA...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTAGAGTGACCTCAGGCTaGACACCACTTTTGACGACT +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPRVTSG*TPLLTT
Trigger: AGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCT...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGTCTCCCTCTGGGCTGTaGTCAGGGGCTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLSPSGL*SGALWH
Trigger: ATGCCACAGAGCCCCTGAGCACAGCCCAGAGGGAGA...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTTTCGACCAAGAGGTTTaGTCGATGGTGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPFDQEV*SMVTVS
Trigger: GGAGACAGTCACCATCGAGCAAACCTCTTGGTCGAA...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTATGTCTATGAAGCTGTaGAGGGCCAGACAATGGGGG +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPMSMKL*RARQWG
Trigger: CCCCCATTGTCTGGCCCTGCACAGCTTCATAGACAT...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTATGTCTATGAAGCTGTaGAGGGCCAGACAATGGGGG +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSMSMKL*RARQWG
Trigger: CCCCCATTGTCTGGCCCTGCACAGCTTCATAGACAT...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CATCAAGCTTGCAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCACTGCCACTGCAGAGTCTTCTCTGTCTaGTCCTGCACCGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: HQACRCPPGAASPRHCHCRVFSV*SCTDFR
Trigger: TCTGAAGTCGGTGCAGGAGCAGACAGAGAAGACTCT...GCAGTGGCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTGGGCCACACCACAGATaGCACAGATCATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAGPHHR*HRSCHC
Trigger: ACAATGACATGATCTGTGGCATCTGTGGTGTGGCCC...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGGATGCTGGCAGGAAATaGCACCTGCTCAATCACCTC +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGDAGRK*HLLNHL
Trigger: GAGGTGATTGAGCAGGTGGCATTTCCTGCCAGCATC...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTCACTGCCTTAGCAGGTaGTGCAGCTTCTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPHCLSR*CSFSSL
Trigger: CAGTGAAGAGAAGCTGCAGCACCTGCTAAGGCAGTG...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCAAGGGGATTCCACACTaGCTTAGCAGGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAKGIPH*LSRCCS
Trigger: GCTGCAGCACCTGCTAAGGCAGTGTGGAATCCCCTT...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCGGCTTATTCTGCCACTaGGGCCACCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVGLFCH*GHLLFL
Trigger: GAGGAAGAGGAGGTGGCCGCAGTGGCAGAATAAGCC...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGGCTTATTCTGCCACTaGGGCCACCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYGLFCH*GHLLFL
Trigger: GAGGAAGAGGAGGTGGCCGCAGTGGCAGAATAAGCC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGCAGCCTGGCTTATTCTaGCACTGCGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLQPGLF*HCGHLL
Trigger: GAGGAGGTGGCCGCAGTGGCAGAATAAGCCAGGCTG...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTAACTGCTCAAAGGCTTaGAGCGGGTCTAGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSNCSKA*SGSSKA
Trigger: CGCCTTACTAGACCCGCTCCAAGCCTTTGAGCAGTT...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGACTTTTTCTTCTTCTTaGGTGGCCCAGGAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLTFSSS*VAQERC
Trigger: ACACCTCTCCTGGGCCACCCAAGAAGAAGAAAAAGT...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTGTAAAGGAGCACCCTaGGCTGGTGCATGTCCCATG +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEACKGAP*AGACPM
Trigger: CATGGGACATGCACCAGCCCAGGGTGCTCCTTTACA...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCTGTAAAGGAGCACCCTaGGCTGGTGCATGTCCCATG +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPCKGAP*AGACPM
Trigger: CATGGGACATGCACCAGCCCAGGGTGCTCCTTTACA...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCTGAGAAGTCCTGTTaGATGGGCCACTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDPEKSC*MGHLVA
Trigger: AGCTACCAAGTGGCCCATCCAACAGGACTTCTCAGG...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGGCAGCAGCTGCAGTGTaGACTGGCGCTGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWAAAAV*TGAGSP
Trigger: GGGAGATCCAGCGCCAGTCCACACTGCAGCTGCTGC...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTCTGTCTGCAGACGGCTaGCTGTCAGCAGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCLSADG*LSAAST
Trigger: AGTGCTGGCTGCTGACAGCCAGCCGTCTGCAGACAG...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTAGACACATCTTCACCTaGGCAGTCACTGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPRHIFT*AVTVCR
Trigger: TCTGCAGACAGTGACTGCCCAGGTGAAGATGTGTCT...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTAGACACATCTTCACCTaGGCAGTCACTGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIARHIFT*AVTVCR
Trigger: TCTGCAGACAGTGACTGCCCAGGTGAAGATGTGTCT...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACCCTCTGTCTCCATCGTaGCCCAAAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNPLSPS*PKSPPH
Trigger: ATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGG...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTCCTCTGTCTCCATCGTaGCCCAAAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSPLSPS*PKSPPH
Trigger: ATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGG...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTTCCTCTCATGAGTGGTaGGAAGAAGGGGGCAATAAC +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPSSHEW*EEGGNN
Trigger: GTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGA...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTAGCTCCTCTCATGAGTaGTGGGAAGAAGGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPSSSHE*WEEGGN
Trigger: ATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCT...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACAGCTCCTCTCATGAGTaGTGGGAAGAAGGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNSSSHE*WEEGGN
Trigger: ATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCT...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTCTGGTTAGTCAGCTCTaGGTAGCAGAGGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSLVSQL*VAEVST
Trigger: TGTGCTGACCTCTGCTACCCAGAGCTGACTAACCAG...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCACAGGGCCAAGGAGTaGTGCCCAGCACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLHRAKE*CPALGS
Trigger: TGACCCCAGTGCTGGGCACCACTCCTTGGCCCTGTG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACACCACCTCACCAGGCTaGCAGCTCTGTACAATGTCA +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNTTSPG*QLCTMS
Trigger: TGACATTGTACAGAGCTGCCAGCCTGGTGAGGTGGT...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGGAATGGAAGCTCTTTaGTCAGTCCCAGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPGMEAL*SVPAVR
Trigger: TCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTACCATGCTCAGGGAATaGAAGCTCTTTGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPTMLRE*KLFGQS
Trigger: GGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAGCTACGTTCAGGAGCTaGCTTACAGCTTCCGAATTC +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAATFRS*LTASEF
Trigger: GAATTCGGAAGCTGTAAGCCAGCTCCTGAACGTAGC...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR TCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCTCCTGTACAGCACCTaGCTGGGTAAGGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLLLYST*LGKGSH
Trigger: GTGGGAGCCCTTACCCAGTCAGGTGCTGTACAGGAG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTAGTGGGGAGGTCTGGTaGGCCATTCACCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCSGEVW*AIHQGL
Trigger: GAGACCTTGGTGAATGGCTCACCAGACCTCCCCACT...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACAGTGGGGAGGTCTGGTaGGCCATTCACCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDSGEVW*AIHQGL
Trigger: GAGACCTTGGTGAATGGCTCACCAGACCTCCCCACT...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGCATGACTGTTACCACTaGTACACTCTCCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGHDCYH*YTLPNL
Trigger: CAGGTTGGGGAGAGTGTATCAGTGGTAACAGTCATG...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTGTGGTGACAGGTTGCTaGTTTCTTTTCACCACAGAG +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPVVTGC*FLFTTE
Trigger: CTCTGTGGTGAAAAGAAATCAGCAACCTGTCACCAC...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTGAAACATATCGGGCTTaGCCTCCACAACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAETYRA*PPQLSP
Trigger: AGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTC...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGCTTTCCCCGGCCTCTTaGTGTAGCCAGGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLLSPAS*CSQAQI
Trigger: GATTTGGGCCTGGCTACATCAAGAGGCCGGGGAAAG...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCGACCTCAGCCAGCTCTaGCTCATTCTCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEADLSQL*LILRNL
Trigger: CAGATTCCTGAGAATGAGTCAGAGCTGGCTGAGGTC...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACTTACCACCTGTGAAGTaGCGTGGGGGCCGTATAGCT +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYLPPVK*RGGRIA
Trigger: AGCTATACGGCCCCCACGTCACTTCACAGGTGGTAA...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGACAATGTCATGGATCTaGCGATTGACAATTTCGCGG +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLTMSWI*RLTISR
Trigger: CCGCGAAATTGTCAATCGTCAGATCCATGACATTGT...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGAGAGGGTGTCACGAATaGCCACCTCACCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWRGCHE*PPHQAG
Trigger: GCCAGCCTGGTGAGGTGGTCATTCGTGACACCCTCT...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACAGCGTGGGAGGATCTTaGGGAAACCTGGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDSVGGS*GNLGCP
Trigger: CGGACATCCCAGGTTTCCGCAAGATCCTCCCACGCT...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGTCCTTAGAGGAATTTTaGTCAGTGGTGACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLSLEEF*SVVTGC
Trigger: GCAACCTGTCACCACTGAGCAAAATTCCTCTAAGGA...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACAGAGTGACCTCAGGCTaGACACCACTTTTGACGACT +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDRVTSG*TPLLTT
Trigger: AGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCT...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTTACAAGAGGGATTCTTaGACTTTCCCCGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPYKRDS*TFPGLL
Trigger: CAAGAGGCCGGGGAAAGTGCAAGAATCCCTCTTGTA...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACTCATTCTCAGGAATCTaGAGGACTTTGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNSFSGI*RTLRSS
Trigger: GCTGCTGCGCAAAGTCCTGCAGATTCCTGAGAATGA...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACTCATTCTCAGGAATCTaGAGGACTTTGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDSFSGI*RTLRSS
Trigger: GCTGCTGCGCAAAGTCCTGCAGATTCCTGAGAATGA...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGTGGGCAGTCACTGTCTaGAGACGGCTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLWAVTV*RRLAVS
Trigger: GCTGACAGCCAGCCGTCTGCAGACAGTGACTGCCCA...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTAGAGTCTTCTCTGTCTaGTCCTGCACCGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPRVFSV*SCTDFR
Trigger: TCTGAAGTCGGTGCAGGAGCAGACAGAGAAGACTCT...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATCTCATCAAGCTTGCAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCACTGCCAGCAGGAAATGCCACCTaGTCAATCACCTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ISSSLQVPSWSSLTKALPAGNAT*SITSVS
Trigger: GGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGC...TGGCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCGCAGGAAATGCCACCTaGTCAATCACCTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAAGNAT*SITSVS
Trigger: GGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGC...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TGGCAGGAAATGCCACCTGCTCAATCACCTCTGTCTCCATCGTGGCCCAAAAGTGCCTCACCAAGGCACTaGCACTGCCAGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: WQEMPPAQSPLSPSWPKSASPRH*HCQVLA
Trigger: AGCCAGTACCTGGCAGTGGCAGTGCCTTGGTGAGGC...ACTTTTGGGCCACGATGGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGCATCAAGCTTGCAGGTaGCCTCCTGGAGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLHQACR*PPGAAS
Trigger: TGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATG...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCCAATCTCATCAAGCTTaGAGGTGCCCTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPQSHQA*RCPPGA
Trigger: TGCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTG...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACGGGTGCTGGATAGAGTaGTCAGTTTCTGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNGCWIE*SVSVMS
Trigger: GGACATGACAGAAACTGAGCACTCTATCCAGCACCC...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGTCTTGGTGACTGGGTaGTGGATAGAGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPVLVTG*WIECSV
Trigger: AACTGAGCACTCTATCCAGCACCCAGTCACCAAGAC...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGGCCTGCATGGACGATaGGCCGCGTGGCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSGLHGR*AAWQSW
Trigger: CCAAGACTGCCACGCGGCGCATCGTCCATGCAGGCC...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCGATGGTTGCGTAAGGTaGCAATTCAGGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVDGCVR*QFRAQG
Trigger: GCCCTGTGCCCTGAATTGGCACCTTACGCAACCATC...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGGACACCGTTTGGTTTaGTGTCCACGATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYGHRLV*CPRWRP
Trigger: TGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGGACACCGTTTGGTTTaGTGTCCACGATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALGHRLV*CPRWRP
Trigger: TGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGACCGTGTCCCCCAAGTaGTCTCTCGGGGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLTVSPK*SLGARR
Trigger: TCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGT...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCAGAGAGGATATTGGCTaGAGCAGCAGTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGREDIG*SSSGQG
Trigger: TCCCTGGCCACTGCTGCTGCAGCCAATATCCTCTCT...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCTCGGAGTCGCGATATaGGGTCCTGAAGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALLGVAI*GPEGQE
Trigger: TTCTTGCCCTTCAGGACCCCATATCGCGACTCCGAG...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTTTTCTTCTTCTTGGGTaGCCCAGGAGAGGTGTAACA +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAFLLLG*PRRGVT
Trigger: TGTTACACCTCTCCTGGGCCACCCAAGAAGAAGAAA...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGATCTTGCGGAAACCTaGGATGTCCGGAACCACAGC +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYDLAET*DVRNHS
Trigger: GCTGTGGTTCCGGACATCCCAGGTTTCCGCAAGATC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTCTAGGAGCACATCCTaGCTGAGGATCTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEASRSTS*LRISEV
Trigger: CACCTCAGAGATCCTCAGCCAGGATGTGCTCCTAGA...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGCTGGTGCATGTCCCATaGCCCCGGCGGGTATATGTA +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLLVHVP*PRRVYV
Trigger: TACATATACCCGCCGGGGCCATGGGACATGCACCAG...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCGGTAGGGCACTTAGGTaGCTTGTGCCTGGTGACATA +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAGRALR*LVPGDI
Trigger: TATGTCACCAGGCACAAGCCACCTAAGTGCCCTACC...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCGGTAGGGCACTTAGGTaGCTTGTGCCTGGTGACATA +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPGRALR*LVPGDI
Trigger: TATGTCACCAGGCACAAGCCACCTAAGTGCCCTACC...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTCTGCTTCAGTGTGCTTaGCTTCAGACCACAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSLLQCA*LQTTSP
Trigger: AGGACTTGTGGTCTGAAGCCAAGCACACTGAAGCAG...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCGAGCCATTTCCACTTTaGGGGCCACACCACAGATGC +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGEPFPL*GPHHRC
Trigger: GCATCTGTGGTGTGGCCCCCAAAGTGGAAATGGCTC...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCGCCACTGCCAGGTACTaGCTGCACATCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPATARY*LHIQVF
Trigger: AAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGC...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GTGATAGGGATGCTGGCAGGAAATGCCACCTGCTCAATCACCTCTGTCTCCATCTTGCAGGTGCCCTCCTaGAGCAGCCTCACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VIGMLAGNATCSITSVSILQVPS*SSLTKA
Trigger: TGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAA...GATGGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGCCAGCATCCCTATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCCTCGCACAAGATACTTaGAGCCGCAGACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPLAQDT*SRRPPD
Trigger: ATCAGGTGGTCTGCGGCTCCAAGTATCTTGTGCGAG...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGCACAAGATACTTaGAGCCGCAGACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEALAQDT*SRRPPD
Trigger: ATCAGGTGGTCTGCGGCTCCAAGTATCTTGTGCGAG...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTACAGGGCCACTGACGTaGCCATATCTACCACATAGA +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSTGPLT*PYLPHR
Trigger: TCTATGTGGTAGATATGGCCACGTCAGTGGCCCTGT...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACACAGGGCCACTGACGTaGCCATATCTACCACATAGA +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNTGPLT*PYLPHR
Trigger: TCTATGTGGTAGATATGGCCACGTCAGTGGCCCTGT...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTCTGGTCCAAGAGCTCTaGGCAGGACACACTCACAGG +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCLVQEL*AGHTHR
Trigger: CCTGTGAGTGTGTCCTGCCCAGAGCTCTTGGACCAG...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGGCAGTCTTGGTGACTaGGTGCTGGATAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYGSLGD*VLDRVL
Trigger: GAGCACTCTATCCAGCACCCAGTCACCAAGACTGCC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCGGCAGTCTTGGTGACTaGGTGCTGGATAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVGSLGD*VLDRVL
Trigger: GAGCACTCTATCCAGCACCCAGTCACCAAGACTGCC...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGTGGGGTCACCAGGATTaGGCTGTAGGCCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLWGHQD*AVGLHG
Trigger: TCCATGCAGGCCTACAGCCCAATCCTGGTGACCCCA...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGCATTGTCGAAGGCAATaGGCCGCTGGCGGACACCGT +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWHCRRQ*AAGGHR
Trigger: ACGGTGTCCGCCAGCGGCCCATTGCCTTCGACAATG...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCCTGTACAACAGCCTaGCTTATTCTGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVPCTTA*LILPLR
Trigger: CCGCAGTGGCAGAATAAGCCAGGCTGTTGTACAGGG...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGCTTCTGCAGGTCCCCTaGATAGCTCTGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLLLQVP*IALPQA
Trigger: TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAG...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACGGAATGGAAGCTCTTTaGTCAGTCCCAGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNGMEAL*SVPAVR
Trigger: TCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCC...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGAGGCGGCTCCAGTCGTaGCAGCAGCAACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWRRLQS*QQQQGS
Trigger: ACTTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCT...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGAGTGGGGAGGTCTGGTaGGCCATTCACCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWSGEVW*AIHQGL
Trigger: GAGACCTTGGTGAATGGCTCACCAGACCTCCCCACT...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ATCTCATCAAGCTTGCAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCACTGCCATCCACAACTTTCACCTaGGAAGTCCTGTTGGATGGG +
Preference number: 4 (lower is better)
Translates to: ISSSLQVPSWSSLTKALPSTTFT*EVLLDG
Trigger: CCCATCCAACAGGACTTCTCAGGTGAAAGTTGTGGA...TGGCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR TCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGGAAACATATCGGGCTTaGCCTCCACAACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGETYRA*PPQLSP
Trigger: AGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTC...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCTTTCCCCGGCCTCTTaGTGTAGCCAGGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLLSPAS*CSQAQI
Trigger: GATTTGGGCCTGGCTACATCAAGAGGCCGGGGAAAG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACGAGCTGTTGAGTTCATaGATCAAGGCGAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDELLSS*IKAKTS
Trigger: TGAGGTCTTCGCCTTGATTCATGAACTCAACAGCTC...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAAGTTTTGTCCCCCTTTaGATAATGGGCTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQASFVPL*IMGCYR
Trigger: TCTGTAGCAGCCCATTATTCAAAGGGGGACAAAACT...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACTGTAGTCTCGGACAGTaGGGCACTCAAAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYCSLGQ*GTQRPN
Trigger: ATTGGGCCTTTGAGTGCCTCACTGTCCGAGACTACA...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AAGGCACTGCCACTGCCAGGTACTGGCTGCACATCCAGGTTTTTGTCTTTCTCACCACAGCTCCTCTCATaGGTGGTGGGAAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: KALPLPGTGCTSRFLSFSPQLLS*VVGRRG
Trigger: CCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGG...TGAGAAAGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGCAGTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR TCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTCATGGGCATCGGAGATaGTCACTTCCTCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCHGHRR*SLPPTH
Trigger: GTGAGTGGGAGGAAGTGATCATCTCCGATGCCCATG...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGAACTGTGTGGCTGGTaGAGAGGAGCTACTCTCACT +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALELCGW*RGATLT
Trigger: AGTGAGAGTAGCTCCTCTGCACCAGCCACACAGTTC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCGAACTGTGTGGCTGGTaGAGAGGAGCTACTCTCACT +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVELCGW*RGATLT
Trigger: AGTGAGAGTAGCTCCTCTGCACCAGCCACACAGTTC...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCACTTAGGTGGCTTGTaGCTGGTGACATATGTAAAG +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAHLGGL*LVTYVK
Trigger: CTTTACATATGTCACCAGGCACAAGCCACCTAAGTG...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCTGGTGTTGGTACGTCTaGTCCAGGACTGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPWCWYV*SRTVIV
Trigger: GACAATGACAGTCCTGGAGCAGACGTACCAACACCA...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCATGTCTATGAAGCTGTaGAGGGCCAGACAATGGGGG +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALMSMKL*RARQWG
Trigger: CCCCCATTGTCTGGCCCTGCACAGCTTCATAGACAT...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTAGGCCCAATAGCCATTaGACAGCAGCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCRPNSH*TAAPAA
Trigger: AGCTGCAGGAGCTGCTGTGCAATGGCTATTGGGCCT...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCATCAAGCTTGCAGGTaGCCTCCTGGAGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLHQACR*PPGAAS
Trigger: TGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCAATCTCATCAAGCTTaGAGGTGCCCTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGQSHQA*RCPPGA
Trigger: TGCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTG...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTAAGGGGATTCCACACTaGCTTAGCAGGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCKGIPH*LSRCCS
Trigger: GCTGCAGCACCTGCTAAGGCAGTGTGGAATCCCCTT...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCGTCCTTGGAGTCTTCTaGCCCAAAGGGGATTCCACA +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVVLGVF*PKGDST
Trigger: TGTGGAATCCCCTTTGGGGCAGAAGACTCCAAGGAC...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTGATGGTTGCGTAAGGTaGCAATTCAGGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCDGCVR*QFRAQG
Trigger: GCCCTGTGCCCTGAATTGGCACCTTACGCAACCATC...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGCCCTGGGTCCCACCATaGTCAGGGAATGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWPWVPP*SGNGSS
Trigger: AGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGG...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTAGAGAGGATATTGGCTaGAGCAGCAGTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCREDIG*SSSGQG
Trigger: TCCCTGGCCACTGCTGCTGCAGCCAATATCCTCTCT...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR CCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGCTCGGAGTCGCGATATaGGGTCCTGAAGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLLGVAI*GPEGQE
Trigger: TTCTTGCCCTTCAGGACCCCATATCGCGACTCCGAG...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACTTTCTTCTTCTTGGGTaGCCCAGGAGAGGTGTAACA +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDFLLLG*PRRGVT
Trigger: TGTTACACCTCTCCTGGGCCACCCAAGAAGAAGAAA...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTTTTCTTCTTCTTGGGTaGCCCAGGAGAGGTGTAACA +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSFLLLG*PRRGVT
Trigger: TGTTACACCTCTCCTGGGCCACCCAAGAAGAAGAAA...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACTCTCCGGGGCAGTGTTaGACACAAGAGGAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDSPGQC*TQEEVL
Trigger: AAGGACCTCCTCTTGTGTCCAACACTGCCCCGGAGA...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCTCACCACAGAGCCTTTaGAAGAGACGCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALSPQSL*KRRQKP
Trigger: TGGCTTCTGGCGTCTCTTCCAAAGGCTCTGTGGTGA...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACACCACTTTTGACGACTaGCGTCTTAGTGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNTTFDD*RLSDCC
Trigger: ACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGT...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACTTGTCCCCTCGGATaGTGTTGGTACGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCTCPLG*CWYVCS
Trigger: GGAGCAGACGTACCAACACCATCCGAGGGGACAAGT...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACTCTGCCTTTAAGCTCTaGAGCTCTGGACCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDSAFKL*SSGPRG
Trigger: ACCCCTGGGTCCAGAGCTCCAGAGCTTAAAGGCAGA...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGTCTGCCTTTAAGCTCTaGAGCTCTGGACCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLSAFKL*SSGPRG
Trigger: ACCCCTGGGTCCAGAGCTCCAGAGCTTAAAGGCAGA...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCCACGTTAACTGGGGCTaGCAAAATTGCTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPHVNWG*QNCSHG
Trigger: CCCATGAGAGCAATTTTGCCAGCCCCAGTTAACGTG...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCTGAGAAGTCCTGTTaGATGGGCCACTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALPEKSC*MGHLVA
Trigger: AGCTACCAAGTGGCCCATCCAACAGGACTTCTCAGG...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAAGAGAAGGCACTGCGTaGACGGAGACTCATAATAAT +
Preference number: 4 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAREGTA*TETHNN
Trigger: ATTATTATGAGTCTCCGTCCACGCAGTGCCTTCTCT...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCAGCTCCTCTCATGAGTaGTGGGAAGAAGGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVSSSHE*WEEGGN
Trigger: ATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCT...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTCGCACAAGATACTTaGAGCCGCAGACCACCTGAT +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGLAQDT*SRRPPD
Trigger: ATCAGGTGGTCTGCGGCTCCAAGTATCTTGTGCGAG...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTTTGGTGACTGGGTGCTaGATAGAGTGCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSLVTGC*IECSVS
Trigger: AGAAACTGAGCACTCTATCCAGCACCCAGTCACCAA...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCGATGGAGGCCAGGATaGTTGCGTAAGGTGCCAATT +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYRWRPG*LRKVPI
Trigger: AATTGGCACCTTACGCAACCATCCTGGCCTCCATCG...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTGTTTGCTGTCCACGATaGAGGCCAGGATGGTTGCGT +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCVCCPR*RPGWLR
Trigger: ACGCAACCATCCTGGCCTCCATCGTGGACAGCAAAC...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGGTTTGCTGTCCACGATaGAGGCCAGGATGGTTGCGT +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLVCCPR*RPGWLR
Trigger: ACGCAACCATCCTGGCCTCCATCGTGGACAGCAAAC...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCCTGTACAACAGCCTaGCTTATTCTGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDPCTTA*LILPLR
Trigger: CCGCAGTGGCAGAATAAGCCAGGCTGTTGTACAGGG...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTATGGCTTGAGAGATaGTGTAGTCCCTGTACAACA +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIALWLER*CSPCTT
Trigger: TGTTGTACAGGGACTACACCATCTCTCAAGCCATAG...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGTCCTTAACCAAAACATaGGCATCGGAGATGATCACT +
Preference number: 4 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLSLTKT*ASEMIT
Trigger: AGTGATCATCTCCGATGCCCATGTTTTGGTTAAGGA...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR TCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCGGCCCAAATCCAATGTaGCAGTGCAGCTGTACTTAT +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPGPNPM*QCSCTY
Trigger: ATAAGTACAGCTGCACTGTCACATTGGATTTGGGCC...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TCCGAGGTCAGAGTCTTCTCTGTCTGCTCCTGCACCGACTTCAGAACAACATTGCTTTCCCCGGCCTCTTaGTGTAGCCAGGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: SEVRVFSVCSCTDFRTTLLSPAS*CSQAQI
Trigger: GATTTGGGCCTGGCTACATCAAGAGGCCGGGGAAAG...CAATGTTGTTCTGAAGTCGGTGCAGGAGCAGACAGAGAAGACTCTGACCTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR TCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGGACCTCAGCCAGCTCTaGCTCATTCTCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLDLSQL*LILRNL
Trigger: CAGATTCCTGAGAATGAGTCAGAGCTGGCTGAGGTC...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTAGGTTTGCTCGATGGTaGCTGTCTCCTCACTCACGT +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCRFARW*LSPHSR
Trigger: ACGTGAGTGAGGAGACAGTCACCATCGAGCAAACCT...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGAGGTTTGCTCGATGGTaGCTGTCTCCTCACTCACGT +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLRFARW*LSPHSR
Trigger: ACGTGAGTGAGGAGACAGTCACCATCGAGCAAACCT...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACAGTTTTGTCCCCCTTTaGATAATGGGCTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDSFVPL*IMGCYR
Trigger: TCTGTAGCAGCCCATTATTCAAAGGGGGACAAAACT...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGCTGTGTAGATGTCTATaGAGCTGTGCAGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLLCRCL*SCAGPD
Trigger: GTCTGGCCCTGCACAGCTTCATAGACATCTACACAG...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTCTGTGTAGATGTCTATaGAGCTGTGCAGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCLCRCL*SCAGPD
Trigger: GTCTGGCCCTGCACAGCTTCATAGACATCTACACAG...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTTCTCCGAGCTTGATCTaGTTTCTGATTGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIASPSLI*FLIAKS
Trigger: GCTTTTTGCAATCAGAAATCAGATCAAGCTCGGAGA...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGTTACCACCTGTGAAGTaGCGTGGGGGCCGTATAGCT +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLLPPVK*RGGRIA
Trigger: AGCTATACGGCCCCCACGTCACTTCACAGGTGGTAA...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTAGATTTTACCACCTGTaGAGTGACGTGGGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCRFYHL*SDVGAV
Trigger: TACGGCCCCCACGTCACTTCACAGGTGGTAAAATCT...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGACAATGTCATGGATCTaGCGATTGACAATTTCGCGG +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGTMSWI*RLTISR
Trigger: CCGCGAAATTGTCAATCGTCAGATCCATGACATTGT...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCAGAGTGACCTCAGGCTaGACACCACTTTTGACGACT +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALRVTSG*TPLLTT
Trigger: AGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCT...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGTGGGGCTGGCAAAATTaGTCTCATGGGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLWGWQN*SHGSCC
Trigger: GCAGCAAGACCCATGAGAGCAATTTTGCCAGCCCCA...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACTGGGGCTGGCAAAATTaGTCTCATGGGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDWGWQN*SHGSCC
Trigger: GCAGCAAGACCCATGAGAGCAATTTTGCCAGCCCCA...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAACTTTGCGCAGCAGCTaGAGTGTGGACTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSTLRSS*SVDWRW
Trigger: CCAGCGCCAGTCCACACTGCAGCTGCTGCGCAAAGT...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCTCATTCTCAGGAATCTaGAGGACTTTGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVSFSGI*RTLRSS
Trigger: GCTGCTGCGCAAAGTCCTGCAGATTCCTGAGAATGA...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCTTCGACCAAGAGGTTTaGTCGATGGTGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGFDQEV*SMVTVS
Trigger: GGAGACAGTCACCATCGAGCAAACCTCTTGGTCGAA...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCATGGGCAGTCACTGTCTaGAGACGGCTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSWAVTV*RRLAVS
Trigger: GCTGACAGCCAGCCGTCTGCAGACAGTGACTGCCCA...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGAGGCCCAATAGCCATTaGACAGCAGCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWRPNSH*TAAPAA
Trigger: AGCTGCAGGAGCTGCTGTGCAATGGCTATTGGGCCT...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GGATTCCACACTGCCTTAGCAGGTGCTGCAGCTTCTCTTCACTGTAGGAGCCAAAGGCCCAATAGCCATTaGACAGCAGCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GFHTALAGAAASLHCRSQRPNSH*TAAPAA
Trigger: AGCTGCAGGAGCTGCTGTGCAATGGCTATTGGGCCT...TTGGCTCCTACAGTGAAGAGAAGCTGCAGCACCTGCTAAGGCAGTGTGGAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGGGCCACACCACAGATaGCACAGATCATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYGPHHR*HRSCHC
Trigger: ACAATGACATGATCTGTGGCATCTGTGGTGTGGCCC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGGGCCACACCACAGATaGCACAGATCATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALGPHHR*HRSCHC
Trigger: ACAATGACATGATCTGTGGCATCTGTGGTGTGGCCC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGGCAGGAAATGCCACCTaGTCAATCACCTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLAGNAT*SITSVS
Trigger: GGAGACAGAGGTGATTGAGCAGGTGGCATTTCCTGC...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGATGCTGGCAGGAAATaGCACCTGCTCAATCACCTC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCDAGRK*HLLNHL
Trigger: GAGGTGATTGAGCAGGTGGCATTTCCTGCCAGCATC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTGCCAGGTACTGGCTaGACATCCAGGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGLPGTG*TSRFLS
Trigger: AGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAG...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGCCTCACCAAGGCACTaGCACTGCCAGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSASPRH*HCQVLA
Trigger: AGCCAGTACCTGGCAGTGGCAGTGCCTTGGTGAGGC...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGCACTGCCTTAGCAGGTaGTGCAGCTTCTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLHCLSR*CSFSSL
Trigger: CAGTGAAGAGAAGCTGCAGCACCTGCTAAGGCAGTG...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGTCCTTGGAGTCTTCTaGCCCAAAGGGGATTCCACA +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCVLGVF*PKGDST
Trigger: TGTGGAATCCCCTTTGGGGCAGAAGACTCCAAGGAC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCGTCTTGGTGACTGGGTaGTGGATAGAGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGVLVTG*WIECSV
Trigger: AACTGAGCACTCTATCCAGCACCCAGTCACCAAGAC...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTAACTGCTCAAAGGCTTaGAGCGGGTCTAGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCNCSKA*SGSSKA
Trigger: CGCCTTACTAGACCCGCTCCAAGCCTTTGAGCAGTT...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCTCGGAGTCGCGATATaGGGTCCTGAAGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLLGVAI*GPEGQE
Trigger: TTCTTGCCCTTCAGGACCCCATATCGCGACTCCGAG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCACTTTTTCTTCTTCTTaGGTGGCCCAGGAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPTFSSS*VAQERC
Trigger: ACACCTCTCCTGGGCCACCCAAGAAGAAGAAAAAGT...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTGATGAACTGTGTGGCTaGTGCAGAGGAGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCDELCG*CRGATL
Trigger: GAGAGTAGCTCCTCTGCACCAGCCACACAGTTCATC...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGACTTGTCCCCTCGGATaGTGTTGGTACGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWTCPLG*CWYVCS
Trigger: GGAGCAGACGTACCAACACCATCCGAGGGGACAAGT...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGTCTGCCTTTAAGCTCTaGAGCTCTGGACCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWSAFKL*SSGPRG
Trigger: ACCCCTGGGTCCAGAGCTCCAGAGCTTAAAGGCAGA...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACTGCCAGGTACTGGCTGCACATCCAGGTTTTTGTCTTTCTCAGTGTTGACGACCTCACCAGGGCCAGATaGCTGTTGAATGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TARYWLHIQVFVFLSVDDLTRAR*LLNGLA
Trigger: GGCCAGCCCATTCAACAGCCATCTGGCCCTGGTGAG...GTCGTCAACACTGAGAAAGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGAGGTTTGTGCCTGTTaGTGTAGACATAGCTACAAG +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSEVCAC*CRHSYK
Trigger: CTTGTAGCTATGTCTACACCAACAGGCACAAACCTC...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGGAGGTTTGTGCCTGTTaGTGTAGACATAGCTACAAG +
Preference number: 4 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGEVCAC*CRHSYK
Trigger: CTTGTAGCTATGTCTACACCAACAGGCACAAACCTC...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTAGAGAAGGCACTGCGTaGACGGAGACTCATAATAAT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSREGTA*TETHNN
Trigger: ATTATTATGAGTCTCCGTCCACGCAGTGCCTTCTCT...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCAGACACATCTTCACCTaGGCAGTCACTGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVRHIFT*AVTVCR
Trigger: TCTGCAGACAGTGACTGCCCAGGTGAAGATGTGTCT...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GGATTCCACACTGCCTTAGCAGGTGCTGCAGCTTCTCTTCACTGTAGGAGCCAAGAGCCATTTCCACTTTaGGGGCCACACCACAGATGC +
Preference number: 4 (lower is better)
Translates to: GFHTALAGAAASLHCRSQEPFPL*GPHHRC
Trigger: GCATCTGTGGTGTGGCCCCCAAAGTGGAAATGGCTC...TTGGCTCCTACAGTGAAGAGAAGCTGCAGCACCTGCTAAGGCAGTGTGGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTCCTCTGTCTCCATCGTaGCCCAAAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCPLSPS*PKSPPH
Trigger: ATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGG...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCTCCTCTCATGAGTGGTaGGAAGAAGGGGGCAATAAC +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGSSHEW*EEGGNN
Trigger: GTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGA...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TTCTCAGTGTTGACGACCACAGCTCCTCTCATGAGTGGTGGGAAGAAGGGGGCAAGCTCCTCTCATGAGTaGTGGGAAGAAGGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: FSVLTTTAPLMSGGKKGASSSHE*WEEGGN
Trigger: ATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCT...TGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGGTCGTCAACACTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGGCAGTCTTGGTGACTaGGTGCTGGATAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLGSLGD*VLDRVL
Trigger: GAGCACTCTATCCAGCACCCAGTCACCAAGACTGCC...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTCGATGGAGGCCAGGATaGTTGCGTAAGGTGCCAATT +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCRWRPG*LRKVPI
Trigger: AATTGGCACCTTACGCAACCATCCTGGCCTCCATCG...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGCTGGCGGACACCGTTTaGTTTGCTGTCCACGATGGA +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWLADTV*FAVHDG
Trigger: TCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAG...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCTGGCGGACACCGTTTaGTTTGCTGTCCACGATGGA +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLLADTV*FAVHDG
Trigger: TCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTAGAGGTAATAGTGAGTaGCATTGTCGAAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSRGNSE*HCRRQW
Trigger: CCATTGCCTTCGACAATGCCACTCACTATTACCTCT...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGCTACGTTCAGGAGCTaGCTTACAGCTTCCGAATTC +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALATFRS*LTASEF
Trigger: GAATTCGGAAGCTGTAAGCCAGCTCCTGAACGTAGC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTTCCTTAACCAAAACATaGGCATCGGAGATGATCACT +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPSLTKT*ASEMIT
Trigger: AGTGATCATCTCCGATGCCCATGTTTTGGTTAAGGA...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
3UTR CAA 72 bp CTGCCACTGCCAGGTACTGGCTGCACATCCAGGTTTTaGTCTTTCTCAGTGTTGACGACCACAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LPLPGTGCTSRF*SFSVLTTTAPL
Trigger: GAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR TCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTCATGACTGTTACCACTaGTACACTCTCCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCHDCYH*YTLPNL
Trigger: CAGGTTGGGGAGAGTGTATCAGTGGTAACAGTCATG...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGTGGTGACAGGTTGCTaGTTTCTTTTCACCACAGAG +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALVVTGC*FLFTTE
Trigger: CTCTGTGGTGAAAAGAAATCAGCAACCTGTCACCAC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTAATTTTGCTCAGTGGTaGCAGGTTGCTGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPNFAQW*QVADFF
Trigger: AAAGAAATCAGCAACCTGTCACCACTGAGCAAAATT...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACTCCACAACTTTCACCTaGGAAGTCCTGTTGGATGGG +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDSTTFT*EVLLDG
Trigger: CCCATCCAACAGGACTTCTCAGGTGAAAGTTGTGGA...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCGGCCCAAATCCAATGTaGCAGTGCAGCTGTACTTAT +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGGPNPM*QCSCTY
Trigger: ATAAGTACAGCTGCACTGTCACATTGGATTTGGGCC...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGGCCCAAATCCAATGTaGCAGTGCAGCTGTACTTAT +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYGPNPM*QCSCTY
Trigger: ATAAGTACAGCTGCACTGTCACATTGGATTTGGGCC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGAGCTGTTGAGTTCATaGATCAAGGCGAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYELLSS*IKAKTS
Trigger: TGAGGTCTTCGCCTTGATTCATGAACTCAACAGCTC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCACAATGTCATGGATCTaGCGATTGACAATTTCGCGG +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPTMSWI*RLTISR
Trigger: CCGCGAAATTGTCAATCGTCAGATCCATGACATTGT...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCAACCACAGCAGTCAGTaGAGAGAGCTTAGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALNHSSQ*RELRVR
Trigger: CCTAACTCTAAGCTCTCTGCACTGACTGCTGTGGTT...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGTGGTGTTGGTACGTCTaGTCCAGGACTGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLWCWYV*SRTVIV
Trigger: GACAATGACAGTCCTGGAGCAGACGTACCAACACCA...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTTGGTGTTGGTACGTCTaGTCCAGGACTGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCWCWYV*SRTVIV
Trigger: GACAATGACAGTCCTGGAGCAGACGTACCAACACCA...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGTGGGGCTGGCAAAATTaGTCTCATGGGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLWGWQN*SHGSCC
Trigger: GCAGCAAGACCCATGAGAGCAATTTTGCCAGCCCCA...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTTTCGACCAAGAGGTTTaGTCGATGGTGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCFDQEV*SMVTVS
Trigger: GGAGACAGTCACCATCGAGCAAACCTCTTGGTCGAA...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACAGAGTCTTCTCTGTCTaGTCCTGCACCGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDRVFSV*SCTDFR
Trigger: TCTGAAGTCGGTGCAGGAGCAGACAGAGAAGACTCT...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGCAATCTCATCAAGCTTaGAGGTGCCCTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWQSHQA*RCPPGA
Trigger: TGCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTG...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGGGTGCTGGATAGAGTaGTCAGTTTCTGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCGCWIE*SVSVMS
Trigger: GGACATGACAGAAACTGAGCACTCTATCCAGCACCC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTGTCTTGGTGACTGGGTaGTGGATAGAGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCVLVTG*WIECSV
Trigger: AACTGAGCACTCTATCCAGCACCCAGTCACCAAGAC...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCACCCTGGGTCCCACCATaGTCAGGGAATGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSPWVPP*SGNGSS
Trigger: AGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGG...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCACTTTTTCTTCTTCTTaGGTGGCCCAGGAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVTFSSS*VAQERC
Trigger: ACACCTCTCCTGGGCCACCCAAGAAGAAGAAAAAGT...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCACCACTTTTGACGACTaGCGTCTTAGTGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALTTFDD*RLSDCC
Trigger: ACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGT...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCACGTTAACTGGGGCTaGCAAAATTGCTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDHVNWG*QNCSHG
Trigger: CCCATGAGAGCAATTTTGCCAGCCCCAGTTAACGTG...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTCACGTTAACTGGGGCTaGCAAAATTGCTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCHVNWG*QNCSHG
Trigger: CCCATGAGAGCAATTTTGCCAGCCCCAGTTAACGTG...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTCTGCTTCAGTGTGCTTaGCTTCAGACCACAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCLLQCA*LQTTSP
Trigger: AGGACTTGTGGTCTGAAGCCAAGCACACTGAAGCAG...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCCTGAGAAGTCCTGTTaGATGGGCCACTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLPEKSC*MGHLVA
Trigger: AGCTACCAAGTGGCCCATCCAACAGGACTTCTCAGG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCAGCTGTACTTATATaGAGGAAACATATCGGGCTT +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSAAVLI*RKHIGL
Trigger: AAGCCCGATATGTTTCCTCCATATAAGTACAGCTGC...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCGAGGTTTGTGCCTGTTaGTGTAGACATAGCTACAAG +
Preference number: 4 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAEVCAC*CRHSYK
Trigger: CTTGTAGCTATGTCTACACCAACAGGCACAAACCTC...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGTGCAGGGCCAGACAATaGGGGTTCAGACACATCTTC +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLCRARQ*GFRHIF
Trigger: GAAGATGTGTCTGAACCCCCATTGTCTGGCCCTGCA...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGCCACTGCCAGGTACTaGCTGCACATCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLATARY*LHIQVF
Trigger: AAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGC...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACACAGGGCCACTGACGTaGCCATATCTACCACATAGA +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDTGPLT*PYLPHR
Trigger: TCTATGTGGTAGATATGGCCACGTCAGTGGCCCTGT...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCACTGGTCCAAGAGCTCTaGGCAGGACACACTCACAGG +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSLVQEL*AGHTHR
Trigger: CCTGTGAGTGTGTCCTGCCCAGAGCTCTTGGACCAG...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACTTGGTGACTGGGTGCTaGATAGAGTGCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYLVTGC*IECSVS
Trigger: AGAAACTGAGCACTCTATCCAGCACCCAGTCACCAA...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAAAGGCAATGGGCCGCTaGCGGACACCGTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSKAMGR*RTPFGL
Trigger: CAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTT...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGGAATGGAAGCTCTTTaGTCAGTCCCAGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCGMEAL*SVPAVR
Trigger: TCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACCATGCTCAGGGAATaGAAGCTCTTTGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCTMLRE*KLFGQS
Trigger: GGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGCCTCACCTACTTCTCTaGGAGGAGCTACGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWPHLLL*EELRSG
Trigger: TCCTGAACGTAGCTCCTCCCAGAGAAGTAGGTGAGG...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
3UTR CAA 72 bp TTCTCTGTCTGCTCCTGCACCGACTTCAGAACAACATaGATGGACACTCTGGGGTCCTCTCCGAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: FSVCSCTDFRTT*MDTLGSSPSLI
Trigger: GATCAAGCTCGGAGAGGACCCCAGAGTGTCCATCAATGTTGTTCTGAAGTCGGTGCAGGAGCAGACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
3UTR CAA 72 bp GGTGGGAAGAAGGGGGCAATAACAGACGCATCAAATTaGGTGATAGGGATGCTGGCAGGAAATGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GGKKGAITDASN*VIGMLAGNATC
Trigger: GCAGGTGGCATTTCCTGCCAGCATCCCTATCACCAAATTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR TCA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACAATTTTGCTCAGTGGTaGCAGGTTGCTGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDNFAQW*QVADFF
Trigger: AAAGAAATCAGCAACCTGTCACCACTGAGCAAAATT...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACGAGCTGTTGAGTTCATaGATCAAGGCGAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDELLSS*IKAKTS
Trigger: TGAGGTCTTCGCCTTGATTCATGAACTCAACAGCTC...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCACCTCTGTCTCTGTCTTaGTCTGAGCAACCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSPLSLS*SEQPQG
Trigger: GCCTTGGGGTTGCTCAGATCAAGACAGAGACAGAGG...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCTCCTTAGAGGAATTTTaGTCAGTGGTGACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGSLEEF*SVVTGC
Trigger: GCAACCTGTCACCACTGAGCAAAATTCCTCTAAGGA...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAAGGCCCAATAGCCATTaGACAGCAGCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSRPNSH*TAAPAA
Trigger: AGCTGCAGGAGCTGCTGTGCAATGGCTATTGGGCCT...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGCTGCCAGGTACTGGCTaGACATCCAGGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLLPGTG*TSRFLS
Trigger: AGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAG...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGCTGCCAGGTACTGGCTaGACATCCAGGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWLPGTG*TSRFLS
Trigger: AGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAG...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TCCATCGTGGCCCAAAAGTCCTCCACATTTACCTCATTAGAGCCCAGGAATTCACATCAAGCTTGCAGGTaGCCTCCTGGAGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SIVAQKSSTFTSLEPRNSHQACR*PPGAAS
Trigger: TGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATG...TGAATTCCTGGGCTCTAATGAGGTAAATGTGGAGGACTTTTGGGCCACGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp TGCTCAATCACCTCTGTCTCCATCGTGGCCCAAAAGTCCTCCACATTTACCTCAAAGGGGATTCCACACTaGCTTAGCAGGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSITSVSIVAQKSSTFTSKGIPH*LSRCCS
Trigger: GCTGCAGCACCTGCTAAGGCAGTGTGGAATCCCCTT...TGAGGTAAATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGATTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGGAGGCCAGGATGGTTaGGTAAGGTGCCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSGGQDG*VRCQFR
Trigger: CCTGAATTGGCACCTTACGCAACCATCCTGGCCTCC...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTAGAGCAAGAGAGAAATaGATCCCTCCTTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCRAREK*IPPSGR
Trigger: TCTCCCTGAAGGAGGGATGCATTTCTCTCTTGCTCT...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCGAAGGTAAGCAGACCTaGGTTTCTTTGTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: MLREWKLFGQSQQSEALPEGKQT*VSLSFL
Trigger: GAGAAAAGACAAAGAAACCCAGGTCTGCTTACCTTC...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTCTTCCTTCTCTAGTTTaGCTTTCTCCAAGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSLPSLV*LSPSSN
Trigger: GTTACTACTTGGAGAAAGCCAAACTAGAGAAGGAAG...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACGCAAAATTGCTCTCATaGGTCTTGCTGCAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDAKLLS*VLLQPV
Trigger: TACTGGCTGCAGCAAGACCCATGAGAGCAATTTTGC...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGCAAAATTGCTCTCATaGGTCTTGCTGCAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCAKLLS*VLLQPV
Trigger: TACTGGCTGCAGCAAGACCCATGAGAGCAATTTTGC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGCTGCTTCAGTGTGCTTaGCTTCAGACCACAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWLLQCA*LQTTSP
Trigger: AGGACTTGTGGTCTGAAGCCAAGCACACTGAAGCAG...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CACAGCTCCTCTCATGAGTGGTGGGAAGAAGGGGGCAATAACAGACGCATCAAACCTGAGAAGTCCTGTTaGATGGGCCACTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: HSSSHEWWEEGGNNRRIKPEKSC*MGHLVA
Trigger: AGCTACCAAGTGGCCCATCCAACAGGACTTCTCAGG...TTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp TCCGAGGTCAGAGTCTTCTCTGTCTGCTCCTGCACCGACTTCAGAACAACATTGCCTCTGTCTCCATCGTaGCCCAAAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: SEVRVFSVCSCTDFRTTLPLSPS*PKSPPH
Trigger: ATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGG...CAATGTTGTTCTGAAGTCGGTGCAGGAGCAGACAGAGAAGACTCTGACCTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCACCCTGTACAACAGCCTaGCTTATTCTGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSPCTTA*LILPLR
Trigger: CCGCAGTGGCAGAATAAGCCAGGCTGTTGTACAGGG...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGCAAGGGCCTTACTATaGCTTGAGAGATGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCARALL*LERWCS
Trigger: ACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTGCAAGGGCCTTACTATaGCTTGAGAGATGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCARALL*LERWCS
Trigger: ACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAAGGTTTGCTCGATGGTaGCTGTCTCCTCACTCACGT +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSRFARW*LSPHSR
Trigger: ACGTGAGTGAGGAGACAGTCACCATCGAGCAAACCT...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TGCTCAATCACCTCTGTCTCCATCGTGGCCCAAAAGTCCTCCACATTTACCTCATGTAGTCTCGGACAGTaGGGCACTCAAAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: CSITSVSIVAQKSSTFTSCSLGQ*GTQRPN
Trigger: ATTGGGCCTTTGAGTGCCTCACTGTCCGAGACTACA...TGAGGTAAATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGATTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTCACTTAGGTGGCTTGTaGCTGGTGACATATGTAAAG +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCHLGGL*LVTYVK
Trigger: CTTTACATATGTCACCAGGCACAAGCCACCTAAGTG...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCATGGCGTCTTAGTGACTaGTGTACCACAATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSWRLSD*CTTIPG
Trigger: CCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCA...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp CACAGCTCCTCTCATGAGTGGTGGGAAGAAGGGGGCAATAACAGACGCATCAAACTGCCAGGTACTGGCTaGACATCCAGGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HSSSHEWWEEGGNNRRIKLPGTG*TSRFLS
Trigger: AGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAG...TTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp GGGAAGAAGGGGGCAATAACAGACGCATCAAATTTGGTGATAGGGATGCTGGCACAATCTCATCAAGCTTaGAGGTGCCCTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GKKGAITDASNLVIGMLAQSHQA*RCPPGA
Trigger: TGCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTG...TGCCAGCATCCCTATCACCAAATTTGATGCGTCTGTTATTGCCCCCTTCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCACACTGCCTTAGCAGGTaGTGCAGCTTCTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSHCLSR*CSFSSL
Trigger: CAGTGAAGAGAAGCTGCAGCACCTGCTAAGGCAGTG...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp ATTTACCTCATTAGAGCCCAGGAATTCAGGCCAGGTGAACTCCACGCTCTTCAGCACTGCCTTAGCAGGTaGTGCAGCTTCTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: IYLIRAQEFRPGELHALQHCLSR*CSFSSL
Trigger: CAGTGAAGAGAAGCTGCAGCACCTGCTAAGGCAGTG...CTGAAGAGCGTGGAGTTCACCTGGCCTGAATTCCTGGGCTCTAATGAGGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGAGAGCAAGAGAGAAATaGATCCCTCCTTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWRAREK*IPPSGR
Trigger: TCTCCCTGAAGGAGGGATGCATTTCTCTCTTGCTCT...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCGAAGGTAAGCAGACCTaGGTTTCTTTGTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGEGKQT*VSLSFL
Trigger: GAGAAAAGACAAAGAAACCCAGGTCTGCTTACCTTC...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCATCTAGGAGCACATCCTaGCTGAGGATCTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSSRSTS*LRISEV
Trigger: CACCTCAGAGATCCTCAGCCAGGATGTGCTCCTAGA...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGCAGCTGTACTTATATaGAGGAAACATATCGGGCTT +
Preference number: 4 (lower is better)
Translates to: TMLREWKLFGQSQQSEALAAVLI*RKHIGL
Trigger: AAGCCCGATATGTTTCCTCCATATAAGTACAGCTGC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTAGAGAAGGCACTGCGTaGACGGAGACTCATAATAAT +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCREGTA*TETHNN
Trigger: ATTATTATGAGTCTCCGTCCACGCAGTGCCTTCTCT...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCATGCAGGGCCAGACAATaGGGGTTCAGACACATCTTC +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSCRARQ*GFRHIF
Trigger: GAAGATGTGTCTGAACCCCCATTGTCTGGCCCTGCA...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCCACTGCCAGGTACTGGCTGCACATCCAGGTTTTTGTCTTTCTCAGTGTTGACTCCTCTCATGAGTGGTaGGAAGAAGGGGGCAATAAC +
Preference number: 4 (lower is better)
Translates to: ATARYWLHIQVFVFLSVDSSHEW*EEGGNN
Trigger: GTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGA...GTCAACACTGAGAAAGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGTTGGTGACTGGGTGCTaGATAGAGTGCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLLVTGC*IECSVS
Trigger: AGAAACTGAGCACTCTATCCAGCACCCAGTCACCAA...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACAGAGGTAATAGTGAGTaGCATTGTCGAAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDRGNSE*HCRRQW
Trigger: CCATTGCCTTCGACAATGCCACTCACTATTACCTCT...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTAGAGGTAATAGTGAGTaGCATTGTCGAAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCRGNSE*HCRRQW
Trigger: CCATTGCCTTCGACAATGCCACTCACTATTACCTCT...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
3UTR CAA 72 bp ACTGGCTGCACATCCAGGTTTTTGTCTTTCTCAGTGTaGACGACCACAGCTCCTCTCATGAGTGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TGCTSRFLSFSV*TTTAPLMSGGK
Trigger: CTTCCCACCACTCATGAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAAAAACCTGGATGTGCAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR TCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGAGTTTTGTCCCCCTTTaGATAATGGGCTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLSFVPL*IMGCYR
Trigger: TCTGTAGCAGCCCATTATTCAAAGGGGGACAAAACT...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTTCTCCGAGCTTGATCTaGTTTCTGATTGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: ALPQARALLWLERWCSPCSPSLI*FLIAKS
Trigger: GCTTTTTGCAATCAGAAATCAGATCAAGCTCGGAGA...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTTCTCCGAGCTTGATCTaGTTTCTGATTGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: THQLRAFPSASPPLNIPCSPSLI*FLIAKS
Trigger: GCTTTTTGCAATCAGAAATCAGATCAAGCTCGGAGA...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGTCCTTAGAGGAATTTTaGTCAGTGGTGACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWSLEEF*SVVTGC
Trigger: GCAACCTGTCACCACTGAGCAAAATTCCTCTAAGGA...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAAGAGTCTTCTCTGTCTaGTCCTGCACCGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSRVFSV*SCTDFR
Trigger: TCTGAAGTCGGTGCAGGAGCAGACAGAGAAGACTCT...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR GCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGGGTGCTGGATAGAGTaGTCAGTTTCTGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSGCWIE*SVSVMS
Trigger: GGACATGACAGAAACTGAGCACTCTATCCAGCACCC...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCATCCTCTCATGAGTGGTaGGAAGAAGGGGGCAATAAC +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSSSHEW*EEGGNN
Trigger: GTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGA...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp AGTGGTGGGAAGAAGGGGGCAATAACAGACGCATCAAATTTGGTGATAGGGATGGCCACTGCCAGGTACTaGCTGCACATCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SGGKKGAITDASNLVIGMATARY*LHIQVF
Trigger: AAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGC...CATCCCTATCACCAAATTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR TCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGAAACATATCGGGCTTaGCCTCCACAACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSETYRA*PPQLSP
Trigger: AGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTC...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp TGCTCAATCACCTCTGTCTCCATCGTGGCCCAAAAGTCCTCCACATTTACCTCAGGCCCAAATCCAATGTaGCAGTGCAGCTGTACTTAT +
Preference number: 4 (lower is better)
Translates to: CSITSVSIVAQKSSTFTSGPNPM*QCSCTY
Trigger: ATAAGTACAGCTGCACTGTCACATTGGATTTGGGCC...TGAGGTAAATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGATTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp CATGAGTGGTGGGAAGAAGGGGGCAATAACAGACGCATCAAATTTGGTGATAGGTACAAGAGGGATTCTTaGACTTTCCCCGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HEWWEEGGNNRRIKFGDRYKRDS*TFPGLL
Trigger: CAAGAGGCCGGGGAAAGTGCAAGAATCCCTCTTGTA...CCTATCACCAAATTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp AGTGGTGGGAAGAAGGGGGCAATAACAGACGCATCAAATTTGGTGATAGGGATGGGGCCACACCACAGATaGCACAGATCATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: SGGKKGAITDASNLVIGMGPHHR*HRSCHC
Trigger: ACAATGACATGATCTGTGGCATCTGTGGTGTGGCCC...CATCCCTATCACCAAATTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR GCA 90 bp AATCACCTCTGTCTCCATCGTGGCCCAAAAGTCCTCCACATTTACCTCATTAGAGATGCTGGCAGGAAATaGCACCTGCTCAATCACCTC +
Preference number: 4 (lower is better)
Translates to: NHLCLHRGPKVLHIYLIRDAGRK*HLLNHL
Trigger: GAGGTGATTGAGCAGGTGGCATTTCCTGCCAGCATC...TCTAATGAGGTAAATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGGAAGGTAAGCAGACCTaGGTTTCTTTGTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: ARALLWLERWCSPCTTAWEGKQT*VSLSFL
Trigger: GAGAAAAGACAAAGAAACCCAGGTCTGCTTACCTTC...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGCAGCTGTACTTATATaGAGGAAACATATCGGGCTT +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLAAVLI*RKHIGL
Trigger: AAGCCCGATATGTTTCCTCCATATAAGTACAGCTGC...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp CACAGCTCCTCTCATGAGTGGTGGGAAGAAGGGGGCAATAACAGACGCATCAAAGAGGTTTGTGCCTGTTaGTGTAGACATAGCTACAAG +
Preference number: 4 (lower is better)
Translates to: HSSSHEWWEEGGNNRRIKEVCAC*CRHSYK
Trigger: CTTGTAGCTATGTCTACACCAACAGGCACAAACCTC...TTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR TCA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGAATTTTGCTCAGTGGTaGCAGGTTGCTGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLNFAQW*QVADFF
Trigger: AAAGAAATCAGCAACCTGTCACCACTGAGCAAAATT...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR TCA 90 bp AATCACCTCTGTCTCCATCGTGGCCCAAAAGTCCTCCACATTTACCTCATTAGAGAAACATATCGGGCTTaGCCTCCACAACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: NHLCLHRGPKVLHIYLIRETYRA*PPQLSP
Trigger: AGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTC...TCTAATGAGGTAAATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR TCA 90 bp ATTTACCTCATTAGAGCCCAGGAATTCAGGCCAGGTGAACTCCACGCTCTTCAGTCTCCGAGCTTGATCTaGTTTCTGATTGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: IYLIRAQEFRPGELHALQSPSLI*FLIAKS
Trigger: GCTTTTTGCAATCAGAAATCAGATCAAGCTCGGAGA...CTGAAGAGCGTGGAGTTCACCTGGCCTGAATTCCTGGGCTCTAATGAGGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CCA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCACTTCCTTCTCTAGTTTaGCTTTCTCCAAGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSLPSLV*LSPSSN
Trigger: GTTACTACTTGGAGAAAGCCAAACTAGAGAAGGAAG...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CCA 90 bp ATTGATGGACACTCTGGGGTCCTCTCCGAGCTTGATCTGATTTCTGATTGCAAAGCAGCTGTACTTATATaGAGGAAACATATCGGGCTT +
Preference number: 4 (lower is better)
Translates to: IDGHSGVLSELDLISDCKAAVLI*RKHIGL
Trigger: AAGCCCGATATGTTTCCTCCATATAAGTACAGCTGC...TTTGCAATCAGAAATCAGATCAAGCTCGGAGAGGACCCCAGAGTGTCCATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS CCA 90 bp CATTCCCGGAGGCGCTTGGCCCGGCGGCTGGACGAGGGGGATGGCTaGCGCACTCGCGCTCCCCGCTGTCGGCGAGAGGCGGCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: HSRRRLARRLDEGDG*RTRAPRCRREAAPV
Trigger: GACTGGAGCCGCCTCTCGCCGACAGCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGCGCCTCCGGGAATG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp CTCACATTCCCGGAGGCGCTTGGCCCGGCGGCTGGACGAGGGGGATaGCTGGCGCACTCGCGCTCCCCGCTGTCGGCGAGAGGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: LTFPEALGPAAGRGG*LAHSRSPLSARGGS
Trigger: GGAGCCGCCTCTCGCCGACAGCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGCGCCTCCGGGAATGTGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp GCAAGCTGCGCCGCTCACATTCCCGGAGGCGCTTGGCCCGGCGGCTaGACGAGGGGGATGGCTGGCGCACTCGCGCTCCCCGCTGTCGGC +
Preference number: 5 (lower is better)
Translates to: ASCAAHIPGGAWPGG*TRGMAGALALPAVG
Trigger: GCCGACAGCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGCGCCTCCGGGAATGTGAGCGGCGCAGCTTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp CCGGCGGCCCTCGCGGCGCACCGGAAGCGGTCGGCAGCGCGTGACTaGATGCGACCCCTGGCGCAAGCGCAACAGCCCAGCCCTAGCTTG +
Preference number: 5 (lower is better)
Translates to: PAALAAHRKRSAARD*MRPLAQAQQPSPSL
Trigger: CAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTCACGCGCTGCCGACCGCTTCCGGTGCGCCGCGAGGGCCGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp CGGCCCTCGCGGCGCACCGGAAGCGGTCGGCAGCGCGTGACTGCATaGGACCCCTGGCGCAAGCGCAACAGCCCAGCCCTAGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: RPSRRTGSGRQRVTA*DPWRKRNSPALAWE
Trigger: CTCCCAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTCACGCGCTGCCGACCGCTTCCGGTGCGCCGCGAGGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp CGGCGCACCGGAAGCGGTCGGCAGCGCGTGACTGCATGCGACCCCTaGCGCAAGCGCAACAGCCCAGCCCTAGCTTGGGAGCGGACCCAC +
Preference number: 5 (lower is better)
Translates to: RRTGSGRQRVTACDP*RKRNSPALAWERTH
Trigger: GTGGGTCCGCTCCCAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTCACGCGCTGCCGACCGCTTCCGGTGCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS TCA 90 bp GGCGCACTCGCGCTCCCCGCTGTCGGCGAGAGGCGGCTCCAGTCGTaGCAGCAGCAACAAGGAAGTGGAGGCGAGGGCTCGCGCGCGCAT +
Preference number: 5 (lower is better)
Translates to: GALALPAVGERRLQS*QQQQGSGGEGSRAH
Trigger: ATGCGCGCGCGAGCCCTCGCCTCCACTTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCTCTCGCCGACAGCGGGGAGCGCGAGTGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp TGTCGGCGAGAGGCGGCTCCAGTCGTGACAGCAGCAACAAGGAAGTaGAGGCGAGGGCTCGCGCGCGCATCCCGGGGGCTGAAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: CRREAAPVVTAATRK*RRGLARASRGLKEP
Trigger: GGGCTCCTTCAGCCCCCGGGATGCGCGCGCGAGCCCTCGCCTCCACTTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCTCTCGCCGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp AAGACGGCAGGGACACGGTCGTCACCGAGGCACCGGTTTGGCGGCTaGACCGGCAGTAGCGGCACACCACGGATCGCCAGGGAGACCCGT +
Preference number: 5 (lower is better)
Translates to: KTAGTRSSPRHRFGG*TGSSGTPRIARETR
Trigger: ACGGGTCTCCCTGGCGATCCGTGGTGTGCCGCTACTGCCGGTGCAGCCGCCAAACCGGTGCCTCGGTGACGACCGTGTCCCTGCCGTCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp GGCACAGGGCCAAGGAGTGGTGCCCAGCACTGGGGTCACCAGGATTaGGCTGTAGGCCTGCATGGACGATGCGCCGCGTGGCAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: GTGPRSGAQHWGHQD*AVGLHGRCAAWQSW
Trigger: CCAAGACTGCCACGCGGCGCATCGTCCATGCAGGCCTACAGCCCAATCCTGGTGACCCCAGTGCTGGGCACCACTCCTTGGCCCTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCACCGAGGCACCGGTTaGGCGGCTGCACCGGCAGTA +
Preference number: 5 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPHRGTG*AAAPAV
Trigger: TACTGCCGGTGCAGCCGCCAAACCGGTGCCTCGGTG...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTAGGGCCAGATGGCTGTaGAATGGGCTGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFRARWL*NGLAQL
Trigger: CAGCTGGGCCAGCCCATTCAACAGCCATCTGGCCCT...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTCTGGGGTCACCAGGATaGGGCTGTAGGCCTGCATGG +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFLGSPG*GCRPAW
Trigger: CCATGCAGGCCTACAGCCCAATCCTGGTGACCCCAG...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp ACTGCATGCGACCCCTGGCGCAAGCGCAACAGCCCAGCCCTAGCTTaGGAGCGGACCCACACGAACTGCTCAAAGGCTTGGAGCGGGTCT +
Preference number: 5 (lower is better)
Translates to: TACDPWRKRNSPALA*ERTHTNCSKAWSGS
Trigger: AGACCCGCTCCAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp CCTCACCAAGGCACTGCCACTGCCTGCAAGAGACAACAGTGCTGGTaGGAGGGTGCTGCCGCCAGTCACCAGAGGCCAAGGCTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: PHQGTATACKRQQCW*EGAAASHQRPRLGP
Trigger: TGGGCCTAGCCTTGGCCTCTGGTGACTGGCGGCAGCACCCTCCCACCAGCACTGTTGTCTCTTGCAGGCAGTGGCAGTGCCTTGGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510472.1
CDS-3UTR CAA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTCACCGAGGCACCGGTTaGGCGGCTGCACCGGCAGTA +
Preference number: 5 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSHRGTG*AAAPAV
Trigger: TACTGCCGGTGCAGCCGCCAAACCGGTGCCTCGGTG...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTGAGCGTGGGAGGATCTaGCGGAAACCTGGGATGTCC +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFERGRI*RKPGMS
Trigger: GGACATCCCAGGTTTCCGCAAGATCCTCCCACGCTC...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTTCCCCTCGGATGGTGTaGGTACGTCTGCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFSPRMV*VRLLQD
Trigger: GTCCTGGAGCAGACGTACCAACACCATCCGAGGGGA...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGAGGGCCAGATGGCTGTaGAATGGGCTGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLRARWL*NGLAQL
Trigger: CAGCTGGGCCAGCCCATTCAACAGCCATCTGGCCCT...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTCGGACACCGTTTGGTTaGCTGTCCACGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFRTPFG*LSTMEA
Trigger: GGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCG...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTGCTGGCGGACACCGTTaGGTTTGCTGTCCACGATGG +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFAGGHR*VCCPRW
Trigger: CCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGC...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp TGGTGCCCAGCACTGGGGTCACCAGGATTGGGCTGTAGGCCTGCATaGACGATGCGCCGCGTGGCAGTCTTGGTGACTGGGTGCTGGATA +
Preference number: 5 (lower is better)
Translates to: WCPALGSPGLGCRPA*TMRRVAVLVTGCWI
Trigger: TATCCAGCACCCAGTCACCAAGACTGCCACGCGGCGCATCGTCCATGCAGGCCTACAGCCCAATCCTGGTGACCCCAGTGCTGGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp AAGGTGCCAATTCAGGGCACAGGGCCAAGGAGTGGTGCCCAGCACTaGGGTCACCAGGATTGGGCTGTAGGCCTGCATGGACGATGCGCC +
Preference number: 5 (lower is better)
Translates to: KVPIQGTGPRSGAQH*GHQDWAVGLHGRCA
Trigger: GGCGCATCGTCCATGCAGGCCTACAGCCCAATCCTGGTGACCCCAGTGCTGGGCACCACTCCTTGGCCCTGTGCCCTGAATTGGCACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACCAGCCCAGCCCTAGCTaGGGAGCGGACCCACACGAA +
Preference number: 5 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNQPSPS*GADPHE
Trigger: TTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCTG...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp GCAGCAGCTGCAGTGTGGACTGGCGCTGGATCTCCCTCTGGGCTGTaGTCAGGGGCTCTGTGGCATTCAGTACATCTGGGAGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: AAAAVWTGAGSPSGL*SGALWHSVHLGVVS
Trigger: GCTCACCACTCCCAGATGTACTGAATGCCACAGAGCCCCTGAGCACAGCCCAGAGGGAGATCCAGCGCCAGTCCACACTGCAGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp CCAGCCCTAGCTTGGGAGCGGACCCACACGAACTGCTCAAAGGCTTaGAGCGGGTCTAGTAAGGCGAACGGACTGCTTCCGGCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: PALAWERTHTNCSKA*SGSSKANGLLPARG
Trigger: ACCTCTGGCCGGAAGCAGTCCGTTCGCCTTACTAGACCCGCTCCAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTCTGGGGCTGGCAAAATaGCTCTCATGGGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFLGLAK*LSWVLL
Trigger: CAGCAAGACCCATGAGAGCAATTTTGCCAGCCCCAG...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGAGGGCCAGATGGCTGTaGAATGGGCTGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGRARWL*NGLAQL
Trigger: CAGCTGGGCCAGCCCATTCAACAGCCATCTGGCCCT...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCACTACAAGAGGGATTCTaGCACTTTCCCCGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTALQEGF*HFPRPL
Trigger: AAGAGGCCGGGGAAAGTGCAAGAATCCCTCTTGTAG...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGCGCCGCGTGGCAGTCTaGGTGACTGGGTGCTGGATA +
Preference number: 5 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGRRVAV*VTGCWI
Trigger: TATCCAGCACCCAGTCACCAAGACTGCCACGCGGCG...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTCGCCGCGTGGCAGTCTaGGTGACTGGGTGCTGGATA +
Preference number: 5 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPRRVAV*VTGCWI
Trigger: TATCCAGCACCCAGTCACCAAGACTGCCACGCGGCG...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACCTGGGGTCACCAGGATaGGGCTGTAGGCCTGCATGG +
Preference number: 5 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNLGSPG*GCRPAW
Trigger: CCATGCAGGCCTACAGCCCAATCCTGGTGACCCCAG...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGCTGGGGTCACCAGGATaGGGCTGTAGGCCTGCATGG +
Preference number: 5 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGLGSPG*GCRPAW
Trigger: CCATGCAGGCCTACAGCCCAATCCTGGTGACCCCAG...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp GCGGACACCGTTTGGTTTGCTGTCCACGATGGAGGCCAGGATGGTTaGGTAAGGTGCCAATTCAGGGCACAGGGCCAAGGAGTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: ADTVWFAVHDGGQDG*VRCQFRAQGQGVVP
Trigger: GGGCACCACTCCTTGGCCCTGTGCCCTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp GCTCTGCCATGCCTGCATGGCTGGGCACTGTCTCCGGGGCAGTGTTaGACACAAGAGGAGGTCCTTTCGGGGACATCTGGTTCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: ALPCLHGWALSPGQC*TQEEVLSGTSGSEP
Trigger: TGGCTCAGAACCAGATGTCCCCGAAAGGACCTCCTCTTGTGTCCAACACTGCCCCGGAGACAGTGCCCAGCCATGCAGGCATGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp AGGCAATGGGCCGCTGGCGGACACCGTTTGGTTTGCTGTCCACGATaGAGGCCAGGATGGTTGCGTAAGGTGCCAATTCAGGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: RQWAAGGHRLVCCPR*RPGWLRKVPIQGTG
Trigger: CCCTGTGCCCTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCAGCCCAGCCCTAGCTaGGGAGCGGACCCACACGAA +
Preference number: 5 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYQPSPS*GADPHE
Trigger: TTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCTG...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCACTTCAATTACCAGGCTaGTCTGGTAAGGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTALQLPG*SGKVGG
Trigger: GCCACCAACCTTACCAGACAAGCCTGGTAATTGAAG...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TGCTGGGGCTCACGCCTTAGCCCACCCAGGACCTCCACCCTGACCCACACCGCATATGTAGTGGTCAGTTaGATGGAGGTGGGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CWGSRLSPPRTSTLTHTAYVVVS*MEVGFS
Trigger: GGAGAACCCCACCTCCATCAAACTGACCACTACATA...TGCGGTGTGGGTCAGGGTGGAGGTCCTGGGTGGGCTAAGGCGTGAGCCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTGTGGACTGGAGGTACTaGTCCCCTCGGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAVDWRY*SPRMVL
Trigger: CAACACCATCCGAGGGGACAAGTACCTCCAGTCCAC...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CAATCTCATCAAGCTTGCAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCACTGCAGGGCCAGATGGCTGTaGAATGGGCTGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QSHQACRCPPGAASPRHCRARWL*NGLAQL
Trigger: CAGCTGGGCCAGCCCATTCAACAGCCATCTGGCCCT...GCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CAA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTCGGACACCGTTTGGTTaGCTGTCCACGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSRTPFG*LSTMEA
Trigger: GGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCG...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp AAGCGCAACAGCCCAGCCCTAGCTTGGGAGCGGACCCACACGAACTaGTCAAAGGCTTGGAGCGGGTCTAGTAAGGCGAACGGACTGCTT +
Preference number: 5 (lower is better)
Translates to: KRNSPALAWERTHTN*SKAWSGSSKANGLL
Trigger: AAGCAGTCCGTTCGCCTTACTAGACCCGCTCCAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCTGTTGCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp GTTTGGTTTGCTGTCCACGATGGAGGCCAGGATGGTTGCGTAAGGTaGCAATTCAGGGCACAGGGCCAAGGAGTGGTGCCCAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: VWFAVHDGGQDGCVR*QFRAQGQGVVPSTG
Trigger: CCCAGTGCTGGGCACCACTCCTTGGCCCTGTGCCCTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp ACTTTGCGCAGCAGCTGCAGTGTGGACTGGCGCTGGATCTCCCTCTaGGCTGTGCTCAGGGGCTCTGTGGCATTCAGTACATCTGGGAGT +
Preference number: 5 (lower is better)
Translates to: TLRSSCSVDWRWISL*AVLRGSVAFSTSGS
Trigger: ACTCCCAGATGTACTGAATGCCACAGAGCCCCTGAGCACAGCCCAGAGGGAGATCCAGCGCCAGTCCACACTGCAGCTGCTGCGCAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp AAGCTGTGCAGGGCCAGACAATGGGGGTTCAGACACATCTTCACCTaGGCAGTCACTGTCTGCAGACGGCTGGCTGTCAGCAGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: KLCRARQWGFRHIFT*AVTVCRRLAVSSQH
Trigger: GTGCTGGCTGCTGACAGCCAGCCGTCTGCAGACAGTGACTGCCCAGGTGAAGATGTGTCTGAACCCCCATTGTCTGGCCCTGCACAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp GCTGGCGGACACCGTTTGGTTTGCTGTCCACGATGGAGGCCAGGATaGTTGCGTAAGGTGCCAATTCAGGGCACAGGGCCAAGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: AGGHRLVCCPRWRPG*LRKVPIQGTGPRSG
Trigger: ACCACTCCTTGGCCCTGTGCCCTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp GTGAGTGGCATTGTCGAAGGCAATGGGCCGCTGGCGGACACCGTTTaGTTTGCTGTCCACGATGGAGGCCAGGATGGTTGCGTAAGGTGC +
Preference number: 5 (lower is better)
Translates to: VSGIVEGNGPLADTV*FAVHDGGQDGCVRC
Trigger: GCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTTCGACAATGCCACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTTTCACCACAGAGCCTTaGGAAGAGACGCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAFTTEP*EETPEA
Trigger: GGCTTCTGGCGTCTCTTCCAAAGGCTCTGTGGTGAA...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAGCTCCAGGACTGTCATaGTCAGTTGTCCCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAAPGLS*SVVPRV
Trigger: CACTCTGGGGACAACTGACAATGACAGTCCTGGAGC...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTCCCCTCGGATGGTGTaGGTACGTCTGCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PTMLREWKLFGQSQQSEASPRMV*VRLLQD
Trigger: GTCCTGGAGCAGACGTACCAACACCATCCGAGGGGA...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGTTGCTCTCATGGGTCTaGCTGCAGCCAGTAATGAGG +
Preference number: 5 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLLLSWV*LQPVMR
Trigger: CCTCATTACTGGCTGCAGCAAGACCCATGAGAGCAA...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTTGTTGGATGGGCCACTaGGTAGCTTCACCTCACCAG +
Preference number: 5 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIACWMGH*VASPHQ
Trigger: CTGGTGAGGTGAAGCTACCAAGTGGCCCATCCAACA...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACGGAATCTGCAGGACTTaGCGCAGCAGCTGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNGICRT*RSSCSV
Trigger: CACACTGCAGCTGCTGCGCAAAGTCCTGCAGATTCC...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTGTCTCCTCACTCACGTaGGACAAGATAAGTCGAGAG +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFVSSLT*DKISRE
Trigger: CTCTCGACTTATCTTGTCCAACGTGAGTGAGGAGAC...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTATTCGACCAAGAGGTTaGCTCGATGGTGACTGTCTC +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFIRPRG*LDGDCL
Trigger: GAGACAGTCACCATCGAGCAAACCTCTTGGTCGAAT...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTGGGAATGGAAGCTCTTaGGTCAGTCCCAGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAGNGSS*VSPSSQ
Trigger: CTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCC...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp AGCTCTGACTCATTCTCAGGAATCTGCAGGACTTTGCGCAGCAGCTaGAGTGTGGACTGGCGCTGGATCTCCCTCTGGGCTGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SSDSFSGICRTLRSS*SVDWRWISLWAVLR
Trigger: CCTGAGCACAGCCCAGAGGGAGATCCAGCGCCAGTCCACACTGCAGCTGCTGCGCAAAGTCCTGCAGATTCCTGAGAATGAGTCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGTACTTTTTCTTCTTCTaGGGTGGCCCAGGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLYFFFF*GGPGEV
Trigger: CACCTCTCCTGGGCCACCCAAGAAGAAGAAAAAGTA...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGCTTCAATTACCAGGCTaGTCTGGTAAGGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLLQLPG*SGKVGG
Trigger: GCCACCAACCTTACCAGACAAGCCTGGTAATTGAAG...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACTTCACCACAGAGCCTTaGGAAGAGACGCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNFTTEP*EETPEA
Trigger: GGCTTCTGGCGTCTCTTCCAAAGGCTCTGTGGTGAA...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CTCCACCCTGACCCACACCGCAGGCCCCACGGAACCCACCAGCTACGAGCCTTTCTCAGTGGTGACAGGTaGCTGATTTCTTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: LHPDPHRRPHGTHQLRAFLSGDR*LISFHH
Trigger: GTGGTGAAAAGAAATCAGCAACCTGTCACCACTGAG...AAAGGCTCGTAGCTGGTGGGTTCCGTGGGGCCTGCGGTGTGGGTCAGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACGGCTGCACACCACTTTaGACGACTGGCGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNGCTPL*TTGVLV
Trigger: CACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCC...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGGGCTGCACACCACTTTaGACGACTGGCGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGGCTPL*TTGVLV
Trigger: CACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCC...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACGCTCCAGGACTGTCATaGTCAGTTGTCCCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDAPGLS*SVVPRV
Trigger: CACTCTGGGGACAACTGACAATGACAGTCCTGGAGC...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCGTGGACTGGAGGTACTaGTCCCCTCGGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAVDWRY*SPRMVL
Trigger: CAACACCATCCGAGGGGACAAGTACCTCCAGTCCAC...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCGCCAGTAATGAGGGCTaGCCCCGTGCTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: MLREWKLFGQSQQSEALPASNEG*PRALPL
Trigger: TAAAGGCAGAGCACGGGGCAAGCCCTCATTACTGGC...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGTGTTGGATGGGCCACTaGGTAGCTTCACCTCACCAG +
Preference number: 5 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGCWMGH*VASPHQ
Trigger: CTGGTGAGGTGAAGCTACCAAGTGGCCCATCCAACA...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACTGTTGGATGGGCCACTaGGTAGCTTCACCTCACCAG +
Preference number: 5 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNCWMGH*VASPHQ
Trigger: CTGGTGAGGTGAAGCTACCAAGTGGCCCATCCAACA...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGTTCTCAGTCCGGTCTTaGGCAAGGTTAACACCACAG +
Preference number: 5 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLFSVRS*ARLTPQ
Trigger: CTGTGGTGTTAACCTTGCCAAAGACCGGACTGAGAA...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGCTCACCTCGATAGCCTaGGTGGTTTTCTCAGTCCGG +
Preference number: 5 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGLTSIA*VVFSVR
Trigger: CCGGACTGAGAAAACCACCAAGGCTATCGAGGTGAG...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCGGAATCTGCAGGACTTaGCGCAGCAGCTGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAGICRT*RSSCSV
Trigger: CACACTGCAGCTGCTGCGCAAAGTCCTGCAGATTCC...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCCAATCTCATCAAGCTaGCAGGTGCCCTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAPISSS*QVPSWS
Trigger: GCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTGG...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCGCTGGCGGACACCGTTaGGTTTGCTGTCCACGATGG +
Preference number: 5 (lower is better)
Translates to: TMLREWKLFGQSQQSEALAGGHR*VCCPRW
Trigger: CCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGC...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGGGAATGGAAGCTCTTaGGTCAGTCCCAGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: SQRPSPQETTSAGPLDSSGNGSS*VSPSSQ
Trigger: CTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCC...AGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 90 bp GCTCCGGTCCTCCTGCAGGCTGCTCTTGGGGATGATGATATAATCTaGGCGTGGGAGGATCTTGCGGAAACCTGGGATGTCCGGAACCAC +
Preference number: 5 (lower is better)
Translates to: APVLLQAALGDDDII*AWEDLAETWDVRNH
Trigger: GTGGTTCCGGACATCCCAGGTTTCCGCAAGATCCTCCCACGCTCAGATTATATCATCATCCCCAAGAGCAGCCTGCAGGAGGACCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp TGGCATTGTCGAAGGCAATGGGCCGCTGGCGGACACCGTTTGGTTTaGTGTCCACGATGGAGGCCAGGATGGTTGCGTAAGGTGCCAATT +
Preference number: 5 (lower is better)
Translates to: WHCRRQWAAGGHRLV*CPRWRPGWLRKVPI
Trigger: AATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTTCGACAATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp GCAGCTTCTCTTCACTGTAGGAGCCAATCTCATCAAGCTTGCAGGTaGCCTCCTGGAGCAGCCTCACCAAGGCACTGCCACTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: AASLHCRSQSHQACR*PPGAASPRHCHCLQ
Trigger: TTGCAGGCAGTGGCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTGGCTCCTACAGTGAAGAGAAGCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510472.1
CDS CCA 90 bp CTGGTGACATATGTAAAGGAGCACCCTGGGCTGGTGCATGTCCCATaGCCCCGGCGGGTATATGTAGTGGTCAGTTTGATGGAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LVTYVKEHPGLVHVP*PRRVYVVVSLMEVG
Trigger: CCCCACCTCCATCAAACTGACCACTACATATACCCGCCGGGGCCATGGGACATGCACCAGCCCAGGGTGCTCCTTTACATATGTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCACACCGAGGCACCGGTTaGGCGGCTGCACCGGCAGTA +
Preference number: 5 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSHRGTG*AAAPAV
Trigger: TACTGCCGGTGCAGCCGCCAAACCGGTGCCTCGGTG...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTTACTTTTTCTTCTTCTaGGGTGGCCCAGGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAYFFFF*GGPGEV
Trigger: CACCTCTCCTGGGCCACCCAAGAAGAAGAAAAAGTA...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACGAGCGTGGGAGGATCTaGCGGAAACCTGGGATGTCC +
Preference number: 5 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDERGRI*RKPGMS
Trigger: GGACATCCCAGGTTTCCGCAAGATCCTCCCACGCTC...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGTCTCCGGGGCAGTGTaGGACACAAGAGGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: THQLRAFPSASPPLNIPCVSGAV*DTRGGP
Trigger: AGGACCTCCTCTTGTGTCCAACACTGCCCCGGAGAC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTGTCTCCGGGGCAGTGTaGGACACAAGAGGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: ALPQARALLWLERWCSPCVSGAV*DTRGGP
Trigger: AGGACCTCCTCTTGTGTCCAACACTGCCCCGGAGAC...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCGCTTGTCTGGTAAGGTaGGTGGCTCTCCCCTACTTC +
Preference number: 5 (lower is better)
Translates to: MLREWKLFGQSQQSEALPACLVR*VALPYF
Trigger: GAAGTAGGGGAGAGCCACCAACCTTACCAGACAAGC...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTTCAATTACCAGGCTaGTCTGGTAAGGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIALQLPG*SGKVGG
Trigger: GCCACCAACCTTACCAGACAAGCCTGGTAATTGAAG...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCCCTTGGCTGGCTTTTCCTTaGGGATCCACTTCCCTCCTA +
Preference number: 5 (lower is better)
Translates to: PKCSLGARRGFLVPLLTPWLAFP*GSTSLL
Trigger: TAGGAGGGAAGTGGATCCCAAAGGAAAAGCCAGCCA...AGGGGTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGCCAGTAATGAGGGCTaGCCCCGTGCTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYASNEG*PRALPL
Trigger: TAAAGGCAGAGCACGGGGCAAGCCCTCATTACTGGC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCGCCAGTAATGAGGGCTaGCCCCGTGCTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGASNEG*PRALPL
Trigger: TAAAGGCAGAGCACGGGGCAAGCCCTCATTACTGGC...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCCTGGGGCTGGCAAAATaGCTCTCATGGGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: MLREWKLFGQSQQSEALPLGLAK*LSWVLL
Trigger: CAGCAAGACCCATGAGAGCAATTTTGCCAGCCCCAG...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCACCTCGATAGCCTaGGTGGTTTTCTCAGTCCGG +
Preference number: 5 (lower is better)
Translates to: PTMLREWKLFGQSQQSEALTSIA*VVFSVR
Trigger: CCGGACTGAGAAAACCACCAAGGCTATCGAGGTGAG...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAGTCTCCTCACTCACGTaGGACAAGATAAGTCGAGAG +
Preference number: 5 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAVSSLT*DKISRE
Trigger: CTCTCGACTTATCTTGTCCAACGTGAGTGAGGAGAC...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAATTCGACCAAGAGGTTaGCTCGATGGTGACTGTCTC +
Preference number: 5 (lower is better)
Translates to: PPHRRPLLQVPWIALPQAIRPRG*LDGDCL
Trigger: GAGACAGTCACCATCGAGCAAACCTCTTGGTCGAAT...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTATTCGACCAAGAGGTTaGCTCGATGGTGACTGTCTC +
Preference number: 5 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPIRPRG*LDGDCL
Trigger: GAGACAGTCACCATCGAGCAAACCTCTTGGTCGAAT...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGTCCCAGCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGAGGCTTACCAGCAGCTaGTTCCCCACATTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: SPSSQRPSPQETTSAGPLRLTSS*FPTLKR
Trigger: TCTCTTTAATGTGGGGAACAAGCTGCTGGTAAGCCT...CAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGCTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTTTGTCTTTCTCAGTGTaGACGACCACAGCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIALSFSV*TTTAPL
Trigger: GAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAA...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCCAATCTCATCAAGCTaGCAGGTGCCCTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYPISSS*QVPSWS
Trigger: GCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTGG...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCAAGCAGAGCTGGTCCTaGGAGTCTTCTGCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: PTMLREWKLFGQSQQSEAKQSWS*ESSAPK
Trigger: CTTTGGGGCAGAAGACTCCAAGGACCAGCTCTGCTT...GGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCTGGAGGCCAGGATGGTaGCGTAAGGTGCCAATTCAG +
Preference number: 5 (lower is better)
Translates to: MLREWKLFGQSQQSEALPWRPGW*RKVPIQ
Trigger: CTGAATTGGCACCTTACGCAACCATCCTGGCCTCCA...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGCGGACACCGTTTGGTTaGCTGTCCACGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLRTPFG*LSTMEA
Trigger: GGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCG...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 90 bp TCTCCCCTACTTCTAGGGAAGCGTCCTCTAGGAGCACATCCTGGCTaGGGATCTCTGAGGTGGCAATCTCCTGTACAGCACCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: SPLLLGKRPLGAHPG*GSLRWQSPVQHLTG
Trigger: CCCAGTCAGGTGCTGTACAGGAGATTGCCACCTCAGAGATCCTCAGCCAGGATGTGCTCCTAGAGGACGCTTCCCTAGAAGTAGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 90 bp GAGCCCTCTGGACTGCCAGTTGGCAGTCACAAGCCCACCAAAGGCTaGGTGTCATGTTCAAGTCCAGGCCTTGCCACATGCTTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: EPSGLPVGSHKPTKG*VSCSSPGLATCFCA
Trigger: TGCACAGAAGCATGTGGCAAGGCCTGGACTTGAACATGACACTCAGCCTTTGGTGGGCTTGTGACTGCCAACTGGCAGTCCAGAGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513318.1
CDS GCA 90 bp GAGTGGACTGGAGGTACTTGTCCCCTCGGATGGTGTTGGTACGTCTaGTCCAGGACTGTCATTGTCAGTTGTCCCCAGAGTGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: EWTGGTCPLGWCWYV*SRTVIVSCPQSDLR
Trigger: CCTGAGGTCACTCTGGGGACAACTGACAATGACAGTCCTGGAGCAGACGTACCAACACCATCCGAGGGGACAAGTACCTCCAGTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp CAGGGCCAGATGGCTGTTGAATGGGCTGGCCCAGCTGCTTCAGTGTaGTTGGCTTCAGACCACAAGTCCTCACAGAGGGAGTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: QGQMAVEWAGPAASV*LASDHKSSQRESYH
Trigger: GTGATAAGACTCCCTCTGTGAGGACTTGTGGTCTGAAGCCAAGCACACTGAAGCAGCTGGGCCAGCCCATTCAACAGCCATCTGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp ATCAAGGCGAAGACCTCAGCCAGCTCTGACTCATTCTCAGGAATCTaGAGGACTTTGCGCAGCAGCTGCAGTGTGGACTGGCGCTGGATC +
Preference number: 5 (lower is better)
Translates to: IKAKTSASSDSFSGI*RTLRSSCSVDWRWI
Trigger: GATCCAGCGCCAGTCCACACTGCAGCTGCTGCGCAAAGTCCTGCAGATTCCTGAGAATGAGTCAGAGCTGGCTGAGGTCTTCGCCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp TGGCTCTCCCCTACTTCTAGGGAAGCGTCCTCTAGGAGCACATCCTaGCTGAGGATCTCTGAGGTGGCAATCTCCTGTACAGCACCTGAC +
Preference number: 5 (lower is better)
Translates to: WLSPTSREASSRSTS*LRISEVAISCTAPD
Trigger: GTCAGGTGCTGTACAGGAGATTGCCACCTCAGAGATCCTCAGCCAGGATGTGCTCCTAGAGGACGCTTCCCTAGAAGTAGGGGAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp AGGAGCAGGGAGTGGACTGGAGGTACTTGTCCCCTCGGATGGTGTTaGTACGTCTGCTCCAGGACTGTCATTGTCAGTTGTCCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RSREWTGGTCPLGWC*YVCSRTVIVSCPQS
Trigger: ACTCTGGGGACAACTGACAATGACAGTCCTGGAGCAGACGTACCAACACCATCCGAGGGGACAAGTACCTCCAGTCCACTCCCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGGAGCGTGGGAGGATCTaGCGGAAACCTGGGATGTCC +
Preference number: 5 (lower is better)
Translates to: ARALLWLERWCSPCTTAWERGRI*RKPGMS
Trigger: GGACATCCCAGGTTTCCGCAAGATCCTCCCACGCTC...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACTATGTAGTGGTCAGTTaGATGGAGGTGGGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNYVVVS*MEVGFS
Trigger: GGAGAACCCCACCTCCATCAAACTGACCACTACATA...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCACTCAGTGGTGACAGGTaGCTGATTTCTTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: PPHRRPLLQVPWIALPQALSGDR*LISFHH
Trigger: GTGGTGAAAAGAAATCAGCAACCTGTCACCACTGAG...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACGTGGACTGGAGGTACTaGTCCCCTCGGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDVDWRY*SPRMVL
Trigger: CAACACCATCCGAGGGGACAAGTACCTCCAGTCCAC...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCTGGGGCTGGCAAAATaGCTCTCATGGGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TMLREWKLFGQSQQSEALLGLAK*LSWVLL
Trigger: CAGCAAGACCCATGAGAGCAATTTTGCCAGCCCCAG...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGGGAAACATATCGGGCTaGACCTCCACAACTTTCACC +
Preference number: 5 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGGNISG*TSTTFT
Trigger: GGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCC...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTGAGTTTTGTCCCCCTTaGAATAATGGGCTGCTACAG +
Preference number: 5 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIAEFCPP*NNGLLQ
Trigger: CTGTAGCAGCCCATTATTCAAAGGGGGACAAAACTC...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACGACTTCAGAACAACATaGATGGACACTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDDFRTT*MDTLGS
Trigger: GGACCCCAGAGTGTCCATCAATGTTGTTCTGAAGTC...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCCCACGGAACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACGACTTCAGAACAACATaGATGGACACTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PHGTHQLRAFPSASPPLNDFRTT*MDTLGS
Trigger: GGACCCCAGAGTGTCCATCAATGTTGTTCTGAAGTC...GTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCCTGGGTTGTCTTTCTCAGTGTaGACGACCACAGCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: GFLVPLLTPGGLRTEDPGLSFSV*TTTAPL
Trigger: GAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAA...CCCAGGGTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTCCAATCTCATCAAGCTaGCAGGTGCCCTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ALPQARALLWLERWCSPCPISSS*QVPSWS
Trigger: GCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTGG...ACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCGGGAATGGAAGCTCTTaGGTCAGTCCCAGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGGNGSS*VSPSSQ
Trigger: CTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCC...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp AGTTGTCCCCAGAGTGACCTCAGGCTGCACACCACTTTTGACGACTaGCGTCTTAGTGACTGCTGTACCACAATTCCCGGGAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SCPQSDLRLHTTFDD*RLSDCCTTIPGSFS
Trigger: GCTGAAGCTCCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCTGGGGACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503427.5
CDS-3UTR CAA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACGGGCACTTAGGTGGCTaGTGCCTGGTGACATATGTA +
Preference number: 5 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYGHLGG*CLVTYV
Trigger: TACATATGTCACCAGGCACAAGCCACCTAAGTGCCC...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCTGGCTGGCTTTTCCTTaGGGATCCACTTCCCTCCTA +
Preference number: 5 (lower is better)
Translates to: TMLREWKLFGQSQQSEALWLAFP*GSTSLL
Trigger: TAGGAGGGAAGTGGATCCCAAAGGAAAAGCCAGCCA...GAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACCTCAGTGGTGACAGGTaGCTGATTTCTTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDLSGDR*LISFHH
Trigger: GTGGTGAAAAGAAATCAGCAACCTGTCACCACTGAG...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTTTCCTTAGAGGAATTTaGCTCAGTGGTGACAGGTTG +
Preference number: 5 (lower is better)
Translates to: RGPPHRRPLLQVPWIALPFLRGI*LSGDRL
Trigger: CAACCTGTCACCACTGAGCAAAATTCCTCTAAGGAA...AGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGGCTCCAGGACTGTCATaGTCAGTTGTCCCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLAPGLS*SVVPRV
Trigger: CACTCTGGGGACAACTGACAATGACAGTCCTGGAGC...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCTTGCTCTCATGGGTCTaGCTGCAGCCAGTAATGAGG +
Preference number: 5 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGLLSWV*LQPVMR
Trigger: CCTCATTACTGGCTGCAGCAAGACCCATGAGAGCAA...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCGGAAACATATCGGGCTaGACCTCCACAACTTTCACC +
Preference number: 5 (lower is better)
Translates to: MLREWKLFGQSQQSEALPGNISG*TSTTFT
Trigger: GGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCC...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCTACAAGAGGGATTCTaGCACTTTCCCCGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGLQEGF*HFPRPL
Trigger: AAGAGGCCGGGGAAAGTGCAAGAATCCCTCTTGTAG...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CAATCTCATCAAGCTTGCAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCACTGCTTCTCAGTCCGGTCTTaGGCAAGGTTAACACCACAG +
Preference number: 5 (lower is better)
Translates to: QSHQACRCPPGAASPRHCFSVRS*ARLTPQ
Trigger: CTGTGGTGTTAACCTTGCCAAAGACCGGACTGAGAA...GCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CAA 90 bp ATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCCCTCCCCTTCTCAGTCCGGTCTTaGGCAAGGTTAACACCACAG +
Preference number: 5 (lower is better)
Translates to: MLREWKLFGQSQQSEALPFSVRS*ARLTPQ
Trigger: CTGTGGTGTTAACCTTGCCAAAGACCGGACTGAGAA...GGGGAGGGCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTCTCACCTCGATAGCCTaGGTGGTTTTCTCAGTCCGG +
Preference number: 5 (lower is better)
Translates to: THQLRAFPSASPPLNIPCLTSIA*VVFSVR
Trigger: CCGGACTGAGAAAACCACCAAGGCTATCGAGGTGAG...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ATCTCATCAAGCTTGCAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCACTGCCAGACTTCAGAACAACATaGATGGACACTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ISSSLQVPSWSSLTKALPDFRTT*MDTLGS
Trigger: GGACCCCAGAGTGTCCATCAATGTTGTTCTGAAGTC...TGGCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCAAGCTTGATGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CAA 90 bp GTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACCACTCCTGACACAGACGCATCAAATTaGGTGATAGGGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: VPQVLSRGQKRFPGTTPDTDASN*VIGMLA
Trigger: TGCCAGCATCCCTATCACCAAATTTGATGCGTCTGT...GTCAGGAGTGGTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCATGCACATCCAGGTTTTaGTCTTTCTCAGTGTTGACG +
Preference number: 5 (lower is better)
Translates to: PPHRRPLLQVPWIALPQACTSRF*SFSVLT
Trigger: CGTCAACACTGAGAAAGACAAAAACCTGGATGTGCA...TGCCTGAGGCAGAGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGCCCTCCCCACAGGAGACCACTTCTGCAGGTCCCCTGGATAGCTTGCACATCCAGGTTTTaGTCTTTCTCAGTGTTGACG +
Preference number: 5 (lower is better)
Translates to: AVRGPPHRRPLLQVPWIACTSRF*SFSVLT
Trigger: CGTCAACACTGAGAAAGACAAAAACCTGGATGTGCA...AGCTATCCAGGGGACCTGCAGAAGTGGTCTCCTGTGGGGAGGGCCTCTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCACGCCGCGTGGCAGTCTaGGTGACTGGGTGCTGGATA +
Preference number: 5 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSRRVAV*VTGCWI
Trigger: TATCCAGCACCCAGTCACCAAGACTGCCACGCGGCG...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTTGGAGGCCAGGATGGTaGCGTAAGGTGCCAATTCAG +
Preference number: 5 (lower is better)
Translates to: THQLRAFPSASPPLNIPCWRPGW*RKVPIQ
Trigger: CTGAATTGGCACCTTACGCAACCATCCTGGCCTCCA...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 90 bp ATGACCACCTCACCAGGCTGGCAGCTCTGTACAATGTCATGGATCTaGCGATTGACAATTTCGCGGCTGGTGAGGAAGTCCATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: MTTSPGWQLCTMSWI*RLTISRLVRKSMRR
Trigger: CCGCCTCATGGACTTCCTCACCAGCCGCGAAATTGTCAATCGTCAGATCCATGACATTGTACAGAGCTGCCAGCCTGGTGAGGTGGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp TTCCCTCCTAGGAAGTTACCACAGGTAGGGCACTTAGGTGGCTTGTaGCTGGTGACATATGTAAAGGAGCACCCTGGGCTGGTGCATGTC +
Preference number: 5 (lower is better)
Translates to: FPPRKLPQVGHLGGL*LVTYVKEHPGLVHV
Trigger: GACATGCACCAGCCCAGGGTGCTCCTTTACATATGTCACCAGGCACAAGCCACCTAAGTGCCCTACCTGTGGTAACTTCCTAGGAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp GACCTCAGGCTGCACACCACTTTTGACGACTGGCGTCTTAGTGACTaGTGTACCACAATTCCCGGGAGCTTCAGCTTCCGAATTCTCCAG +
Preference number: 5 (lower is better)
Translates to: DLRLHTTFDDWRLSD*CTTIPGSFSFRILQ
Trigger: CTGGAGAATTCGGAAGCTGAAGCTCCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCCTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503427.5
CDS GCA 90 bp GCTCCAGGACTGTCATTGTCAGTTGTCCCCAGAGTGACCTCAGGCTaGACACCACTTTTGACGACTGGCGTCTTAGTGACTGCTGTACCA +
Preference number: 5 (lower is better)
Translates to: APGLSLSVVPRVTSG*TPLLTTGVLVTAVP
Trigger: TGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCTGGGGACAACTGACAATGACAGTCCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp TGGATAGCTCTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATaGTGTAGTCCCTGTACAACAGCCTGGCTTATTCTGCCACTGCGG +
Preference number: 5 (lower is better)
Translates to: WIALPQARALLWLER*CSPCTTAWLILPLR
Trigger: CCGCAGTGGCAGAATAAGCCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGCTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp CTGCAGGTCCCCTGGATAGCTCTGCCTCAGGCAAGGGCCTTACTATaGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGCTTATT +
Preference number: 5 (lower is better)
Translates to: LQVPWIALPQARALL*LERWCSPCTTAWLI
Trigger: AATAAGCCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAGAGCTATCCAGGGGACCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 90 bp AGTTGTCCCCAGAGTGACCTCAGGCTGCACACCACTTTTGACGACTaGCGTCTTAGTGACTGCTGTACCACAATTCCCGGGAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SCPQSDLRLHTTFDD*RLSDCCTTIPGSFL
Trigger: AAGGAAGCTCCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCTGGGGACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGGCTTGTCTGGTAAGGTaGGTGGCTCTCCCCTACTTC +
Preference number: 5 (lower is better)
Translates to: ARALLWLERWCSPCTTAWACLVR*VALPYF
Trigger: GAAGTAGGGGAGAGCCACCAACCTTACCAGACAAGC...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGGGGCACTTAGGTGGCTaGTGCCTGGTGACATATGTA +
Preference number: 5 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLGHLGG*CLVTYV
Trigger: TACATATGTCACCAGGCACAAGCCACCTAAGTGCCC...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACGGGCACTTAGGTGGCTaGTGCCTGGTGACATATGTA +
Preference number: 5 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDGHLGG*CLVTYV
Trigger: TACATATGTCACCAGGCACAAGCCACCTAAGTGCCC...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGGGCTGCACACCACTTTaGACGACTGGCGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: ARALLWLERWCSPCTTAWGCTPL*TTGVLV
Trigger: CACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCC...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCATCCCCTCGGATGGTGTaGGTACGTCTGCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSSPRMV*VRLLQD
Trigger: GTCCTGGAGCAGACGTACCAACACCATCCGAGGGGA...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTTTGCTCTCATGGGTCTaGCTGCAGCCAGTAATGAGG +
Preference number: 5 (lower is better)
Translates to: THQLRAFPSASPPLNIPCLLSWV*LQPVMR
Trigger: CCTCATTACTGGCTGCAGCAAGACCCATGAGAGCAA...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GGATTCCACACTGCCTTAGCAGGTGCTGCAGCTTCTCTTCACTGTAGGAGCCAATGTTGGATGGGCCACTaGGTAGCTTCACCTCACCAG +
Preference number: 5 (lower is better)
Translates to: GFHTALAGAAASLHCRSQCWMGH*VASPHQ
Trigger: CTGGTGAGGTGAAGCTACCAAGTGGCCCATCCAACA...TTGGCTCCTACAGTGAAGAGAAGCTGCAGCACCTGCTAAGGCAGTGTGGAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CAA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCGGAAACATATCGGGCTaGACCTCCACAACTTTCACC +
Preference number: 5 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVGNISG*TSTTFT
Trigger: GGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCC...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACCTACAAGAGGGATTCTaGCACTTTCCCCGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDLQEGF*HFPRPL
Trigger: AAGAGGCCGGGGAAAGTGCAAGAATCCCTCTTGTAG...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ACTGAGGACCCTGGGTCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCGACTTCAGAACAACATaGATGGACACTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: TEDPGSHHAQGMEALWSVDFRTT*MDTLGS
Trigger: GGACCCCAGAGTGTCCATCAATGTTGTTCTGAAGTC...GACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGACCCAGGGTCCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CCTGCTCAATCACCTCTGTCTCCATCGTGGCCCAAAAGTCCTCCACATTTACCTCCAATCTCATCAAGCTaGCAGGTGCCCTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PAQSPLSPSWPKSPPHLPPISSS*QVPSWS
Trigger: GCTCCAGGAGGGCACCTGCAAGCTTGATGAGATTGG...AGGTAAATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGATTGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CAA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGAAGCAGAGCTGGTCCTaGGAGTCTTCTGCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: ARALLWLERWCSPCTTAWKQSWS*ESSAPK
Trigger: CTTTGGGGCAGAAGACTCCAAGGACCAGCTCTGCTT...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGCTGGCGGACACCGTTaGGTTTGCTGTCCACGATGG +
Preference number: 5 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSAGGHR*VCCPRW
Trigger: CCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGC...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 90 bp GACCTCAGGCTGCACACCACTTTTGACGACTGGCGTCTTAGTGACTaGTGTACCACAATTCCCGGGAGCTTCCTTAACCAAAACATGGGC +
Preference number: 5 (lower is better)
Translates to: DLRLHTTFDDWRLSD*CTTIPGSFLNQNMG
Trigger: GCCCATGTTTTGGTTAAGGAAGCTCCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCCTGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR CAA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGTACTTTTTCTTCTTCTaGGGTGGCCCAGGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLYFFFF*GGPGEV
Trigger: CACCTCTCCTGGGCCACCCAAGAAGAAGAAAAAGTA...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCAGGCTTACCAGCAGCTaGTTCCCCACATTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGRLTSS*FPTLKR
Trigger: TCTCTTTAATGTGGGGAACAAGCTGCTGGTAAGCCT...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GACAGTGAGGCACTCAAAGGCCCAATAGCCATTGCACAGCAGCTCCTGCAGCTGACAGACGCATCAAATTaGGTGATAGGGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: DSEALKGPIAIAQQLLQLTDASN*VIGMLA
Trigger: TGCCAGCATCCCTATCACCAAATTTGATGCGTCTGT...CAGCTGCAGGAGCTGCTGTGCAATGGCTATTGGGCCTTTGAGTGCCTCACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CAA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACTTGTCTTTCTCAGTGTaGACGACCACAGCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDLSFSV*TTTAPL
Trigger: GAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAA...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 90 bp TTGAGGGAATGCTTTCCCGGGGAATTTGTAGAGCTATTCTCCAAATaGGCCCTCTGGACTGCCAGTTGGCAGTCACAAGCCCACCAAAGG +
Preference number: 5 (lower is better)
Translates to: LRECFPGEFVELFSK*ALWTASWQSQAHQR
Trigger: CCTTTGGTGGGCTTGTGACTGCCAACTGGCAGTCCAGAGGGCTCATTTGGAGAATAGCTCTACAAATTCCCCGGGAAAGCATTCCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513318.1
CDS-3UTR CAA 90 bp TCCCACCATGCTCAGGGAATGGAAGCTCTTTGGTCAGTCCCAGCAGTCAGAGGCTTCCTTAGAGGAATTTaGCTCAGTGGTGACAGGTTG +
Preference number: 5 (lower is better)
Translates to: SHHAQGMEALWSVPAVRGFLRGI*LSGDRL
Trigger: CAACCTGTCACCACTGAGCAAAATTCCTCTAAGGAA...GCCTCTGACTGCTGGGACTGACCAAAGAGCTTCCATTCCCTGAGCATGGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGTGTTGACGACCACAGCTCCTCTCATGAGTGGTGGGAAGAAGGGGGCAATAACGGAAACATATCGGGCTaGACCTCCACAACTTTCACC +
Preference number: 5 (lower is better)
Translates to: SVDDHSSSHEWWEEGGNNGNISG*TSTTFT
Trigger: GGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCC...GTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTGGTCGTCAACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CAA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGTTCTCAGTCCGGTCTTaGGCAAGGTTAACACCACAG +
Preference number: 5 (lower is better)
Translates to: ARALLWLERWCSPCTTAWFSVRS*ARLTPQ
Trigger: CTGTGGTGTTAACCTTGCCAAAGACCGGACTGAGAA...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ATTAAACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTCTCCTCACTCACGTaGGACAAGATAAGTCGAGAG +
Preference number: 5 (lower is better)
Translates to: IKHTVSPKCSLGARRGFLVSSLT*DKISRE
Trigger: CTCTCGACTTATCTTGTCCAACGTGAGTGAGGAGAC...CAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp ACCCACCAGCTACGAGCCTTTCCCTCAGCCTCCCCTCCATTAAACATACCGTGTGAGTTTTGTCCCCCTTaGAATAATGGGCTGCTACAG +
Preference number: 5 (lower is better)
Translates to: THQLRAFPSASPPLNIPCEFCPP*NNGLLQ
Trigger: CTGTAGCAGCCCATTATTCAAAGGGGGACAAAACTC...ACACGGTATGTTTAATGGAGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AGAAGAGGTTTCCTGGTACCACTCCTGACCCCTGGAGGGTTGAGAACTGAGGACAGGCTTACCAGCAGCTaGTTCCCCACATTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: RRGFLVPLLTPGGLRTEDRLTSS*FPTLKR
Trigger: TCTCTTTAATGTGGGGAACAAGCTGCTGGTAAGCCT...GTCCTCAGTTCTCAACCCTCCAGGGGTCAGGAGTGGTACCAGGAAACCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AACATACCGTGTCCCCCAAGTGCTCTCTCGGGGCCAGAAGAGGTTTCCTGGTACTGCACATCCAGGTTTTaGTCTTTCTCAGTGTTGACG +
Preference number: 5 (lower is better)
Translates to: NIPCPPSALSGPEEVSWYCTSRF*SFSVLT
Trigger: CGTCAACACTGAGAAAGACAAAAACCTGGATGTGCA...GTACCAGGAAACCTCTTCTGGCCCCGAGAGAGCACTTGGGGGACACGGTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCATGGAGGCCAGGATGGTaGCGTAAGGTGCCAATTCAG +
Preference number: 5 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSWRPGW*RKVPIQ
Trigger: CTGAATTGGCACCTTACGCAACCATCCTGGCCTCCA...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp TCACCAAGGCACTGCCACTGCCAGGTACTGGCTGCACATCCAGGTTTTTGTCTTAAAGAGACGATAGCCTaGGTGGTTTTCTCAGTCCGG +
Preference number: 5 (lower is better)
Translates to: SPRHCHCQVLAAHPGFCLKETIA*VVFSVR
Trigger: CCGGACTGAGAAAACCACCAAGGCTATCGTCTCTTT...AAGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGCAGTGCCTTGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS CCA 90 bp TCACTCTCCTCACCTACTTCTCTGGGAGGAGCTACGTTCAGGAGCTaGCTTACAGCTTCCGAATTCTCCAGAGTCAGTTTGGAGGCATTT +
Preference number: 5 (lower is better)
Translates to: SLSSPTSLGGATFRS*LTASEFSRVSLEAF
Trigger: AAATGCCTCCAAACTGACTCTGGAGAATTCGGAAGCTGTAAGCCAGCTCCTGAACGTAGCTCCTCCCAGAGAAGTAGGTGAGGAGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS-3UTR CAA 90 bp CAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAGACTGAGGGGGCTGTTCCTTAGAGGAATTTaGCTCAGTGGTGACAGGTTG +
Preference number: 5 (lower is better)
Translates to: QAPSQRQQAKQFIRLRGLFLRGI*LSGDRL
Trigger: CAACCTGTCACCACTGAGCAAAATTCCTCTAAGGAA...CAGCCCCCTCAGTCTGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp GCAAGGGCCTTACTATGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTGGACAGACGCATCAAATTaGGTGATAGGGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ARALLWLERWCSPCTTAWTDASN*VIGMLA
Trigger: TGCCAGCATCCCTATCACCAAATTTGATGCGTCTGT...CCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AAGGCACTGCCACTGCCAGGTACTGGCTGCACATCCAGGTTTTTGTCTTTCTCATTGTCTTTCTCAGTGTaGACGACCACAGCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: KALPLPGTGCTSRFLSFSLSFSV*TTTAPL
Trigger: GAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAA...TGAGAAAGACAAAAACCTGGATGTGCAGCCAGTACCTGGCAGTGGCAGTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CAA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCATATGTAGTGGTCAGTTaGATGGAGGTGGGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSYVVVS*MEVGFS
Trigger: GGAGAACCCCACCTCCATCAAACTGACCACTACATA...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 90 bp TTATATGGAGGAAACATATCGGGCTTGACCTCCACAACTTTCACCTaGGAAGTCCTGTTGGATGGGCCACTTGGTAGCTTCACCTCACCA +
Preference number: 5 (lower is better)
Translates to: LYGGNISGLTSTTFT*EVLLDGPLGSFTSP
Trigger: TGGTGAGGTGAAGCTACCAAGTGGCCCATCCAACAGGACTTCTCAGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCCTCCATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000514469.1
ENST00000613459.4
CDS TCA 90 bp TCCTCACTCACGTTGGACAAGATAAGTCGAGAGCTGTTGAGTTCATaGATCAAGGCGAAGACCTCAGCCAGCTCTGACTCATTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SSLTLDKISRELLSS*IKAKTSASSDSFSG
Trigger: TCCTGAGAATGAGTCAGAGCTGGCTGAGGTCTTCGCCTTGATTCATGAACTCAACAGCTCTCGACTTATCTTGTCCAACGTGAGTGAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp AATCACCTCTGTCTCCATCGTGGCCCAAAAGTCCTCCACATTTACCTCATTAGACTACAAGAGGGATTCTaGCACTTTCCCCGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: NHLCLHRGPKVLHIYLIRLQEGF*HFPRPL
Trigger: AAGAGGCCGGGGAAAGTGCAAGAATCCCTCTTGTAG...TCTAATGAGGTAAATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS-3UTR CAA 90 bp TTAATGAGGCCACCCAGGCCCCTAGTCAAAGGCAACAGGCTAAGCAATTCATCAACAGACGCATCAAATTaGGTGATAGGGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LMRPPRPLVKGNRLSNSSTDASN*VIGMLA
Trigger: TGCCAGCATCCCTATCACCAAATTTGATGCGTCTGT...TGATGAATTGCTTAGCCTGTTGCCTTTGACTAGGGGCCTGGGTGGCCTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS-3UTR CAA 90 bp CACAGCTCCTCTCATGAGTGGTGGGAAGAAGGGGGCAATAACAGACGCATCAAATGCACATCCAGGTTTTaGTCTTTCTCAGTGTTGACG +
Preference number: 5 (lower is better)
Translates to: HSSSHEWWEEGGNNRRIKCTSRF*SFSVLT
Trigger: CGTCAACACTGAGAAAGACAAAAACCTGGATGTGCA...TTTGATGCGTCTGTTATTGCCCCCTTCTTCCCACCACTCATGAGAGGAGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS TCA 90 bp AGAACAACATTGATGGACACTCTGGGGTCCTCTCCGAGCTTGATCTaGTTTCTGATTGCAAAAAGCAAGTCCAGGCTTACCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RTTLMDTLGSSPSLI*FLIAKSKSRLTSSL
Trigger: CAAGCTGCTGGTAAGCCTGGACTTGCTTTTTGCAATCAGAAATCAGATCAAGCTCGGAGAGGACCCCAGAGTGTCCATCAATGTTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000514469.1
ENST00000613459.4
CDS TCA 90 bp TTATATGGAGGAAACATATCGGGCTTGACCTCCACAACTTTCACCTaGGAAGTCCTGTTGGATGGGCCACTTGGTAGCTGTGGATCAGAA +
Preference number: 5 (lower is better)
Translates to: LYGGNISGLTSTTFT*EVLLDGPLGSCGSE
Trigger: TTCTGATCCACAGCTACCAAGTGGCCCATCCAACAGGACTTCTCAGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCCTCCATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513318.1
CDS CCA 90 bp TGTAGCCAGGCCCAAATCCAATGTGACAGTGCAGCTGTACTTATATaGAGGAAACATATCGGGCTTGACCTCCACAACTTTCACCTGAGA +
Preference number: 5 (lower is better)
Translates to: CSQAQIQCDSAAVLI*RKHIGLDLHNFHLR
Trigger: TCTCAGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCCTCCATATAAGTACAGCTGCACTGTCACATTGGATTTGGGCCTGGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000513318.1
ENST00000514469.1
ENST00000613459.4
CDS-3UTR CAA 90 bp AATCACCTCTGTCTCCATCGTGGCCCAAAAGTCCTCCACATTTACCTCATTAGAAGGCTTACCAGCAGCTaGTTCCCCACATTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: NHLCLHRGPKVLHIYLIRRLTSS*FPTLKR
Trigger: TCTCTTTAATGTGGGGAACAAGCTGCTGGTAAGCCT...TCTAATGAGGTAAATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514469.1
CDS CCA 72 bp AGGCGCTTGGCCCGGCGGCTGGACGAGGGGGATGGCTaGCGCACTCGCGCTCCCCGCTGTCGGCGAGAGGCG +
Preference number: 6 (lower is better)
Translates to: RRLARRLDEGDG*RTRAPRCRREA
Trigger: CGCCTCTCGCCGACAGCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGCGCCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp CCGGAGGCGCTTGGCCCGGCGGCTGGACGAGGGGGATaGCTGGCGCACTCGCGCTCCCCGCTGTCGGCGAGA +
Preference number: 6 (lower is better)
Translates to: PEALGPAAGRGG*LAHSRSPLSAR
Trigger: TCTCGCCGACAGCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGCGCCTCCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp GGCCCTCGCGGCGCACCGGAAGCGGTCGGCAGCGCGTaGCTGCATGCGACCCCTGGCGCAAGCGCAACAGCC +
Preference number: 6 (lower is better)
Translates to: GPRGAPEAVGSA*LHATPGASATA
Trigger: GGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTCACGCGCTGCCGACCGCTTCCGGTGCGCCGCGAGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp CTCGCGGCGCACCGGAAGCGGTCGGCAGCGCGTGACTaGATGCGACCCCTGGCGCAAGCGCAACAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: LAAHRKRSAARD*MRPLAQAQQPS
Trigger: GCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTCACGCGCTGCCGACCGCTTCCGGTGCGCCGCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp CGGCGCACCGGAAGCGGTCGGCAGCGCGTGACTGCATaGGACCCCTGGCGCAAGCGCAACAGCCCAGCCCTA +
Preference number: 6 (lower is better)
Translates to: RRTGSGRQRVTA*DPWRKRNSPAL
Trigger: TAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTCACGCGCTGCCGACCGCTTCCGGTGCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp GGGACACGGTCGTCACCGAGGCACCGGTTTGGCGGCTaGACCGGCAGTAGCGGCACACCACGGATCGCCAGG +
Preference number: 6 (lower is better)
Translates to: GTRSSPRHRFGG*TGSSGTPRIAR
Trigger: CCTGGCGATCCGTGGTGTGCCGCTACTGCCGGTGCAGCCGCCAAACCGGTGCCTCGGTGACGACCGTGTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp GAGGCGGCTCCAGTCGTGACAGCAGCAACAAGGAAGTaGAGGCGAGGGCTCGCGCGCGCATCCCGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: EAAPVVTAATRK*RRGLARASRGL
Trigger: CAGCCCCCGGGATGCGCGCGCGAGCCCTCGCCTCCACTTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 90 bp GCTCGAGGAAGACGGCAGGGACACGGTCGTCACCGAGGCACCGGTTaGGCGGCTGCACCGGCAGTAGCGGCACACCACGGATCGCCAGGG +
Preference number: 6 (lower is better)
Translates to: ARGRRQGHGRHRGTG*AAAPAVAAHHGSPG
Trigger: CCCTGGCGATCCGTGGTGTGCCGCTACTGCCGGTGCAGCCGCCAAACCGGTGCCTCGGTGACGACCGTGTCCCTGCCGTCTTCCTCGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp GGAAGCGGTCGGCAGCGCGTGACTGCATGCGACCCCTaGCGCAAGCGCAACAGCCCAGCCCTAGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: GSGRQRVTACDP*RKRNSPALAWE
Trigger: CTCCCAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTCACGCGCTGCCGACCGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp AGACGGCAGGGACACGGTCGTCACCGAGGCACCGGTTaGGCGGCTGCACCGGCAGTAGCGGCACACCACGGA +
Preference number: 6 (lower is better)
Translates to: RRQGHGRHRGTG*AAAPAVAAHHG
Trigger: TCCGTGGTGTGCCGCTACTGCCGGTGCAGCCGCCAAACCGGTGCCTCGGTGACGACCGTGTCCCTGCCGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp CATATGATGCGTCCATGGCCGGAGGAGCGTGCAAGCTaGGCCGCTCACATTCCCGGAGGCGCTTGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: HMMRPWPEERAS*AAHIPGGAWPG
Trigger: GCCGGGCCAAGCGCCTCCGGGAATGTGAGCGGCGCAGCTTGCACGCTCCTCCGGCCATGGACGCATCATATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 90 bp GACTGCATGCGACCCCTGGCGCAAGCGCAACAGCCCAGCCCTAGCTaGGGAGCGGACCCACACGAACTGCTCAAAGGCTTGGAGCGGGTC +
Preference number: 6 (lower is better)
Translates to: DCMRPLAQAQQPSPS*GADPHELLKGLERV
Trigger: GACCCGCTCCAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp CAAAGGCTTGGAGCGGGTCTAGTAAGGCGAACGGACTaGTTCCGGCCAGAGGTCCCGGGCGGAGGAGGAAGC +
Preference number: 6 (lower is better)
Translates to: QRLGAGLVRRTD*FRPEVPGGGGS
Trigger: GCTTCCTCCTCCGCCCGGGACCTCTGGCCGGAAGCAGTCCGTTCGCCTTACTAGACCCGCTCCAAGCCTTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp GACCCCTGGCGCAAGCGCAACAGCCCAGCCCTAGCTTaGGAGCGGACCCACACGAACTGCTCAAAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: DPWRKRNSPALA*ERTHTNCSKAW
Trigger: CCAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp GCACTGGGGTCACCAGGATTGGGCTGTAGGCCTGCATaGACGATGCGCCGCGTGGCAGTCTTGGTGACTGGG +
Preference number: 6 (lower is better)
Translates to: ALGSPGLGCRPA*TMRRVAVLVTG
Trigger: CCCAGTCACCAAGACTGCCACGCGGCGCATCGTCCATGCAGGCCTACAGCCCAATCCTGGTGACCCCAGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp GGCACTGCCACTGCCTGCAAGAGACAACAGTGCTGGTaGGAGGGTGCTGCCGCCAGTCACCAGAGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: GTATACKRQQCW*EGAAASHQRPR
Trigger: CCTTGGCCTCTGGTGACTGGCGGCAGCACCCTCCCACCAGCACTGTTGTCTCTTGCAGGCAGTGGCAGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510472.1
CDS CAA 72 bp CGACCCCTGGCGCAAGCGCAACAGCCCAGCCCTAGCTaGGGAGCGGACCCACACGAACTGCTCAAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: RPLAQAQQPSPS*GADPHELLKGL
Trigger: CAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp AGGCCCCGCCTCACCTTTCAGAGCCACGTCGGGCGCTaGGAAGCCTACAATACCACCCTCTCCTCAGCACGA +
Preference number: 6 (lower is better)
Translates to: RPRLTFQSHVGR*EAYNTTLSSAR
Trigger: TCGTGCTGAGGAGAGGGTGGTATTGTAGGCTTCCCAGCGCCCGACGTGGCTCTGAAAGGTGAGGCGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503427.5
CDS GCA 72 bp GCTGTCCACGATGGAGGCCAGGATGGTTGCGTAAGGTaGCAATTCAGGGCACAGGGCCAAGGAGTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: AVHDGGQDGCVR*QFRAQGQGVVP
Trigger: GGGCACCACTCCTTGGCCCTGTGCCCTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp TGCAGGTGCCCTCCTGGAGCAGCCTCACCAAGGCACTaGCACTGCCTGCAAGAGACAACAGTGCTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: CRCPPGAASPRH*HCLQETTVLVG
Trigger: TCCCACCAGCACTGTTGTCTCTTGCAGGCAGTGGCAGTGCCTTGGTGAGGCTGCTCCAGGAGGGCACCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510472.1
CDS CCA 72 bp GTCTGCAGACGGCTGGCTGTCAGCAGCCAGCACTCCTaGGGCCCAGCCAGGGAGTTTTGTCCCCCTTTGAAT +
Preference number: 6 (lower is better)
Translates to: VCRRLAVSSQHS*GPAREFCPPLN
Trigger: ATTCAAAGGGGGACAAAACTCCCTGGCTGGGCCCCAGGAGTGCTGGCTGCTGACAGCCAGCCGTCTGCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 90 bp GGCGGACACCGTTTGGTTTGCTGTCCACGATGGAGGCCAGGATGGTaGCGTAAGGTGCCAATTCAGGGCACAGGGCCAAGGAGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: GGHRLVCCPRWRPGW*RKVPIQGTGPRSGA
Trigger: GGCACCACTCCTTGGCCCTGTGCCCTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp CTCGCTTCCCCTCCTCGGAGTCGCGATATGGGGTCCTaGAGGGCAAGAATAGGAGCACAGGTTCGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: LASPPRSRDMGS*RARIGAQVRSA
Trigger: TGCGGAGCGAACCTGTGCTCCTATTCTTGCCCTTCAGGACCCCATATCGCGACTCCGAGGAGGGGAAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp AGCCCAGCCCTAGCTTGGGAGCGGACCCACACGAACTaGTCAAAGGCTTGGAGCGGGTCTAGTAAGGCGAAC +
Preference number: 6 (lower is better)
Translates to: SPALAWERTHTN*SKAWSGSSKAN
Trigger: GTTCGCCTTACTAGACCCGCTCCAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp GCAGTGTGGACTGGCGCTGGATCTCCCTCTGGGCTGTaGTCAGGGGCTCTGTGGCATTCAGTACATCTGGGA +
Preference number: 6 (lower is better)
Translates to: AVWTGAGSPSGL*SGALWHSVHLG
Trigger: TCCCAGATGTACTGAATGCCACAGAGCCCCTGAGCACAGCCCAGAGGGAGATCCAGCGCCAGTCCACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp CGAAGGCAATGGGCCGCTGGCGGACACCGTTTGGTTTaGTGTCCACGATGGAGGCCAGGATGGTTGCGTAAG +
Preference number: 6 (lower is better)
Translates to: RRQWAAGGHRLV*CPRWRPGWLRK
Trigger: CTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp GCTTGGGAGCGGACCCACACGAACTGCTCAAAGGCTTaGAGCGGGTCTAGTAAGGCGAACGGACTGCTTCCG +
Preference number: 6 (lower is better)
Translates to: AWERTHTNCSKA*SGSSKANGLLP
Trigger: CGGAAGCAGTCCGTTCGCCTTACTAGACCCGCTCCAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp TGCCTGCATGGCTGGGCACTGTCTCCGGGGCAGTGTTaGACACAAGAGGAGGTCCTTTCGGGGACATCTGGT +
Preference number: 6 (lower is better)
Translates to: CLHGWALSPGQC*TQEEVLSGTSG
Trigger: ACCAGATGTCCCCGAAAGGACCTCCTCTTGTGTCCAACACTGCCCCGGAGACAGTGCCCAGCCATGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp GGGCAGTCCCATGCTGCTGCCTCGCCCCACGTTAACTaGGGCTGGCAAAATTGCTCTCATGGGTCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: GQSHAAASPHVN*GWQNCSHGSCC
Trigger: GCAGCAAGACCCATGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGGCAGCAGCATGGGACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp CAGGAATCTGCAGGACTTTGCGCAGCAGCTGCAGTGTaGACTGGCGCTGGATCTCCCTCTGGGCTGTGCTCA +
Preference number: 6 (lower is better)
Translates to: QESAGLCAAAAV*TGAGSPSGLCS
Trigger: TGAGCACAGCCCAGAGGGAGATCCAGCGCCAGTCCACACTGCAGCTGCTGCGCAAAGTCCTGCAGATTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp ATGCCTGCATGGCTGGGCACTGTCTCCGGGGCAGTGTaGGACACAAGAGGAGGTCCTTTCGGGGACATCTGG +
Preference number: 6 (lower is better)
Translates to: MPAWLGTVSGAV*DTRGGPFGDIW
Trigger: CCAGATGTCCCCGAAAGGACCTCCTCTTGTGTCCAACACTGCCCCGGAGACAGTGCCCAGCCATGCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp AGGGCCAGACAATGGGGGTTCAGACACATCTTCACCTaGGCAGTCACTGTCTGCAGACGGCTGGCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: RARQWGFRHIFT*AVTVCRRLAVS
Trigger: GCTGACAGCCAGCCGTCTGCAGACAGTGACTGCCCAGGTGAAGATGTGTCTGAACCCCCATTGTCTGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp CATGGTCACGGGCACTCTCACCTCGCACAAGATACTTaGAGCCGCAGACCACCTGATGGGGGCACACCTTGT +
Preference number: 6 (lower is better)
Translates to: HGHGHSHLAQDT*SRRPPDGGTPC
Trigger: ACAAGGTGTGCCCCCATCAGGTGGTCTGCGGCTCCAAGTATCTTGTGCGAGGTGAGAGTGCCCGTGACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000510472.1
ENST00000613459.4
CDS CCA 72 bp GCCGCTGGCGGACACCGTTTGGTTTGCTGTCCACGATaGAGGCCAGGATGGTTGCGTAAGGTGCCAATTCAG +
Preference number: 6 (lower is better)
Translates to: AAGGHRLVCCPR*RPGWLRKVPIQ
Trigger: CTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp ATTGTCGAAGGCAATGGGCCGCTGGCGGACACCGTTTaGTTTGCTGTCCACGATGGAGGCCAGGATGGTTGC +
Preference number: 6 (lower is better)
Translates to: IVEGNGPLADTV*FAVHDGGQDGC
Trigger: GCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTTCGACAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp CATTGTCGAAGGCAATGGGCCGCTGGCGGACACCGTTaGGTTTGCTGTCCACGATGGAGGCCAGGATGGTTG +
Preference number: 6 (lower is better)
Translates to: HCRRQWAAGGHR*VCCPRWRPGWL
Trigger: CAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTTCGACAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 90 bp GGATTGGGCTGTAGGCCTGCATGGACGATGCGCCGCGTGGCAGTCTaGGTGACTGGGTGCTGGATAGAGTGCTCAGTTTCTGTCATGTCC +
Preference number: 6 (lower is better)
Translates to: GLGCRPAWTMRRVAV*VTGCWIECSVSVMS
Trigger: GGACATGACAGAAACTGAGCACTCTATCCAGCACCCAGTCACCAAGACTGCCACGCGGCGCATCGTCCATGCAGGCCTACAGCCCAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 90 bp AGTGAGTGGCATTGTCGAAGGCAATGGGCCGCTGGCGGACACCGTTaGGTTTGCTGTCCACGATGGAGGCCAGGATGGTTGCGTAAGGTG +
Preference number: 6 (lower is better)
Translates to: SEWHCRRQWAAGGHR*VCCPRWRPGWLRKV
Trigger: CACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTTCGACAATGCCACTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp TCATTCTCAGGAATCTGCAGGACTTTGCGCAGCAGCTaGAGTGTGGACTGGCGCTGGATCTCCCTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SFSGICRTLRSS*SVDWRWISLWA
Trigger: AGCCCAGAGGGAGATCCAGCGCCAGTCCACACTGCAGCTGCTGCGCAAAGTCCTGCAGATTCCTGAGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp GATGGTGTAGTCCCTGTACAACAGCCTGGCTTATTCTaGCACTGCGGCCACCTCCTCTTCCTCACCCTCCTC +
Preference number: 6 (lower is better)
Translates to: DGVVPVQQPGLF*HCGHLLFLTLL
Trigger: GAGGAGGGTGAGGAAGAGGAGGTGGCCGCAGTGGCAGAATAAGCCAGGCTGTTGTACAGGGACTACACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp CACCGTTTGGTTTGCTGTCCACGATGGAGGCCAGGATaGTTGCGTAAGGTGCCAATTCAGGGCACAGGGCCA +
Preference number: 6 (lower is better)
Translates to: HRLVCCPRWRPG*LRKVPIQGTGP
Trigger: TGGCCCTGTGCCCTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp TGTAGGCCTGCATGGACGATGCGCCGCGTGGCAGTCTaGGTGACTGGGTGCTGGATAGAGTGCTCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: CRPAWTMRRVAV*VTGCWIECSVS
Trigger: AGAAACTGAGCACTCTATCCAGCACCCAGTCACCAAGACTGCCACGCGGCGCATCGTCCATGCAGGCCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp CGTTTGGTTTGCTGTCCACGATGGAGGCCAGGATGGTaGCGTAAGGTGCCAATTCAGGGCACAGGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: RLVCCPRWRPGW*RKVPIQGTGPR
Trigger: CCTTGGCCCTGTGCCCTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp TCTGAGCAACCCCAAGGCGGTAGAGGGTGTCACGAATaGCCACCTCACCAGGCTGGCAGCTCTGTACAATGT +
Preference number: 6 (lower is better)
Translates to: SEQPQGGRGCHE*PPHQAGSSVQC
Trigger: ACATTGTACAGAGCTGCCAGCCTGGTGAGGTGGTCATTCGTGACACCCTCTACCGCCTTGGGGTTGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp GGACTGCCAGTTGGCAGTCACAAGCCCACCAAAGGCTaGGTGTCATGTTCAAGTCCAGGCCTTGCCACATGC +
Preference number: 6 (lower is better)
Translates to: GLPVGSHKPTKG*VSCSSPGLATC
Trigger: GCATGTGGCAAGGCCTGGACTTGAACATGACACTCAGCCTTTGGTGGGCTTGTGACTGCCAACTGGCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513318.1
CDS GCA 72 bp ATGGCTGTTGAATGGGCTGGCCCAGCTGCTTCAGTGTaGTTGGCTTCAGACCACAAGTCCTCACAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: MAVEWAGPAASV*LASDHKSSQRE
Trigger: CTCCCTCTGTGAGGACTTGTGGTCTGAAGCCAAGCACACTGAAGCAGCTGGGCCAGCCCATTCAACAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp TGGACGATGCGCCGCGTGGCAGTCTTGGTGACTGGGTaGTGGATAGAGTGCTCAGTTTCTGTCATGTCCACA +
Preference number: 6 (lower is better)
Translates to: WTMRRVAVLVTG*WIECSVSVMST
Trigger: TGTGGACATGACAGAAACTGAGCACTCTATCCAGCACCCAGTCACCAAGACTGCCACGCGGCGCATCGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp GTTTGGTTTGCTGTCCACGATGGAGGCCAGGATGGTTaGGTAAGGTGCCAATTCAGGGCACAGGGCCAAGGA +
Preference number: 6 (lower is better)
Translates to: VWFAVHDGGQDG*VRCQFRAQGQG
Trigger: TCCTTGGCCCTGTGCCCTGAATTGGCACCTTACGCAACCATCCTGGCCTCCATCGTGGACAGCAAACCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp AGCAGGGAGTGGACTGGAGGTACTTGTCCCCTCGGATaGTGTTGGTACGTCTGCTCCAGGACTGTCATTGTC +
Preference number: 6 (lower is better)
Translates to: SREWTGGTCPLG*CWYVCSRTVIV
Trigger: GACAATGACAGTCCTGGAGCAGACGTACCAACACCATCCGAGGGGACAAGTACCTCCAGTCCACTCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp TGCATGGACGATGCGCCGCGTGGCAGTCTTGGTGACTaGGTGCTGGATAGAGTGCTCAGTTTCTGTCATGTC +
Preference number: 6 (lower is better)
Translates to: CMDDAPRGSLGD*VLDRVLSFCHV
Trigger: GACATGACAGAAACTGAGCACTCTATCCAGCACCCAGTCACCAAGACTGCCACGCGGCGCATCGTCCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp TTCCTCCATCACGACAGTTACCTCAGTACCATCATATaGTGCGTCCATGGCCGGAGGAGCGTGCAAGCTGCG +
Preference number: 6 (lower is better)
Translates to: FLHHDSYLSTII*CVHGRRSVQAA
Trigger: CGCAGCTTGCACGCTCCTCCGGCCATGGACGCATCATATGATGGTACTGAGGTAACTGTCGTGATGGAGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp GGAGGTACTTGTCCCCTCGGATGGTGTTGGTACGTCTaGTCCAGGACTGTCATTGTCAGTTGTCCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: GGTCPLGWCWYV*SRTVIVSCPQS
Trigger: ACTCTGGGGACAACTGACAATGACAGTCCTGGAGCAGACGTACCAACACCATCCGAGGGGACAAGTACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp AAGACCTCAGCCAGCTCTGACTCATTCTCAGGAATCTaGAGGACTTTGCGCAGCAGCTGCAGTGTGGACTGG +
Preference number: 6 (lower is better)
Translates to: KTSASSDSFSGI*RTLRSSCSVDW
Trigger: CCAGTCCACACTGCAGCTGCTGCGCAAAGTCCTGCAGATTCCTGAGAATGAGTCAGAGCTGGCTGAGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp TATGTAAAGGAGCACCCTGGGCTGGTGCATGTCCCATaGCCCCGGCGGGTATATGTAGTGGTCAGTTTGATG +
Preference number: 6 (lower is better)
Translates to: YVKEHPGLVHVP*PRRVYVVVSLM
Trigger: CATCAAACTGACCACTACATATACCCGCCGGGGCCATGGGACATGCACCAGCCCAGGGTGCTCCTTTACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp CAGAGTGACCTCAGGCTGCACACCACTTTTGACGACTaGCGTCTTAGTGACTGCTGTACCACAATTCCCGGG +
Preference number: 6 (lower is better)
Translates to: QSDLRLHTTFDD*RLSDCCTTIPG
Trigger: CCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp ACGATGCGCCGCGTGGCAGTCTTGGTGACTGGGTGCTaGATAGAGTGCTCAGTTTCTGTCATGTCCACAGTA +
Preference number: 6 (lower is better)
Translates to: TMRRVAVLVTGC*IECSVSVMSTV
Trigger: TACTGTGGACATGACAGAAACTGAGCACTCTATCCAGCACCCAGTCACCAAGACTGCCACGCGGCGCATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp TGGCTTGAGAGATGGTGTAGTCCCTGTACAACAGCCTaGCTTATTCTGCCACTGCGGCCACCTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: WLERWCSPCTTA*LILPLRPPPLP
Trigger: AGGAAGAGGAGGTGGCCGCAGTGGCAGAATAAGCCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp TCGGATGGTGTTGGTACGTCTGCTCCAGGACTGTCATaGTCAGTTGTCCCCAGAGTGACCTCAGGCTGCACA +
Preference number: 6 (lower is better)
Translates to: SDGVGTSAPGLS*SVVPRVTSGCT
Trigger: TGTGCAGCCTGAGGTCACTCTGGGGACAACTGACAATGACAGTCCTGGAGCAGACGTACCAACACCATCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp GGAGTGGACTGGAGGTACTTGTCCCCTCGGATGGTGTaGGTACGTCTGCTCCAGGACTGTCATTGTCAGTTG +
Preference number: 6 (lower is better)
Translates to: GVDWRYLSPRMV*VRLLQDCHCQL
Trigger: CAACTGACAATGACAGTCCTGGAGCAGACGTACCAACACCATCCGAGGGGACAAGTACCTCCAGTCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 90 bp CACTTCCCTCCTAGGAAGTTACCACAGGTAGGGCACTTAGGTGGCTaGTGCCTGGTGACATATGTAAAGGAGCACCCTGGGCTGGTGCAT +
Preference number: 6 (lower is better)
Translates to: HFPPRKLPQVGHLGG*CLVTYVKEHPGLVH
Trigger: ATGCACCAGCCCAGGGTGCTCCTTTACATATGTCACCAGGCACAAGCCACCTAAGTGCCCTACCTGTGGTAACTTCCTAGGAGGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp CTCCTGCAGGCTGCTCTTGGGGATGATGATATAATCTaGGCGTGGGAGGATCTTGCGGAAACCTGGGATGTC +
Preference number: 6 (lower is better)
Translates to: LLQAALGDDDII*AWEDLAETWDV
Trigger: GACATCCCAGGTTTCCGCAAGATCCTCCCACGCTCAGATTATATCATCATCCCCAAGAGCAGCCTGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp AGGAAGTTACCACAGGTAGGGCACTTAGGTGGCTTGTaGCTGGTGACATATGTAAAGGAGCACCCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RKLPQVGHLGGL*LVTYVKEHPGL
Trigger: CAGCCCAGGGTGCTCCTTTACATATGTCACCAGGCACAAGCCACCTAAGTGCCCTACCTGTGGTAACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp CTGCACACCACTTTTGACGACTGGCGTCTTAGTGACTaGTGTACCACAATTCCCGGGAGCTTCAGCTTCCGA +
Preference number: 6 (lower is better)
Translates to: LHTTFDDWRLSD*CTTIPGSFSFR
Trigger: TCGGAAGCTGAAGCTCCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503427.5
CDS CCA 72 bp CCTACTTCTAGGGAAGCGTCCTCTAGGAGCACATCCTaGCTGAGGATCTCTGAGGTGGCAATCTCCTGTACA +
Preference number: 6 (lower is better)
Translates to: PTSREASSRSTS*LRISEVAISCT
Trigger: TGTACAGGAGATTGCCACCTCAGAGATCCTCAGCCAGGATGTGCTCCTAGAGGACGCTTCCCTAGAAGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp GAGTGGACTGGAGGTACTTGTCCCCTCGGATGGTGTTaGTACGTCTGCTCCAGGACTGTCATTGTCAGTTGT +
Preference number: 6 (lower is better)
Translates to: EWTGGTCPLGWC*YVCSRTVIVSC
Trigger: ACAACTGACAATGACAGTCCTGGAGCAGACGTACCAACACCATCCGAGGGGACAAGTACCTCCAGTCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp TGTAGAGGTAATAGTGAGTGGCATTGTCGAAGGCAATaGGCCGCTGGCGGACACCGTTTGGTTTGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: CRGNSEWHCRRQ*AAGGHRLVCCP
Trigger: TGGACAGCAAACCAAACGGTGTCCGCCAGCGGCCCATTGCCTTCGACAATGCCACTCACTATTACCTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp CCTAGGAAGTTACCACAGGTAGGGCACTTAGGTGGCTaGTGCCTGGTGACATATGTAAAGGAGCACCCTGGG +
Preference number: 6 (lower is better)
Translates to: PRKLPQVGHLGG*CLVTYVKEHPG
Trigger: CCCAGGGTGCTCCTTTACATATGTCACCAGGCACAAGCCACCTAAGTGCCCTACCTGTGGTAACTTCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp GTTGTCCCCAGAGTGACCTCAGGCTGCACACCACTTTaGACGACTGGCGTCTTAGTGACTGCTGTACCACAA +
Preference number: 6 (lower is better)
Translates to: VVPRVTSGCTPL*TTGVLVTAVPQ
Trigger: TTGTGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCTGGGGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 90 bp GGAGGTCTGGTGAGCCATTCACCAAGGTCTCTTCAATTACCAGGCTaGTCTGGTAAGGTTGGTGGCTCTCCCCTACTTCTAGGGAAGCGT +
Preference number: 6 (lower is better)
Translates to: GGLVSHSPRSLQLPG*SGKVGGSPLLLGKR
Trigger: ACGCTTCCCTAGAAGTAGGGGAGAGCCACCAACCTTACCAGACAAGCCTGGTAATTGAAGAGACCTTGGTGAATGGCTCACCAGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 90 bp TCATTGTCAGTTGTCCCCAGAGTGACCTCAGGCTGCACACCACTTTaGACGACTGGCGTCTTAGTGACTGCTGTACCACAATTCCCGGGA +
Preference number: 6 (lower is better)
Translates to: SLSVVPRVTSGCTPL*TTGVLVTAVPQFPG
Trigger: TCCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCTGGGGACAACTGACAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp GCTACAAGAGGGATTCTTGCACTTTCCCCGGCCTCTTaGTGTAGCCAGGCCCAAATCCAATGTGACAGTGCA +
Preference number: 6 (lower is better)
Translates to: ATRGILALSPAS*CSQAQIQCDSA
Trigger: TGCACTGTCACATTGGATTTGGGCCTGGCTACATCAAGAGGCCGGGGAAAGTGCAAGAATCCCTCTTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000513318.1
ENST00000514469.1
ENST00000613459.4
CDS TCA 72 bp TCACCAGGCTGGCAGCTCTGTACAATGTCATGGATCTaGCGATTGACAATTTCGCGGCTGGTGAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: SPGWQLCTMSWI*RLTISRLVRKS
Trigger: GGACTTCCTCACCAGCCGCGAAATTGTCAATCGTCAGATCCATGACATTGTACAGAGCTGCCAGCCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp GCGGAAACCTGGGATGTCCGGAACCACAGCAGTCAGTaGAGAGAGCTTAGAGTTAGGATCCAAACCTTCCTT +
Preference number: 6 (lower is better)
Translates to: AETWDVRNHSSQ*RELRVRIQTFL
Trigger: AAGGAAGGTTTGGATCCTAACTCTAAGCTCTCTGCACTGACTGCTGTGGTTCCGGACATCCCAGGTTTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS GCA 72 bp CTGTCATTGTCAGTTGTCCCCAGAGTGACCTCAGGCTaGACACCACTTTTGACGACTGGCGTCTTAGTGACT +
Preference number: 6 (lower is better)
Translates to: LSLSVVPRVTSG*TPLLTTGVLVT
Trigger: AGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAGCCTGAGGTCACTCTGGGGACAACTGACAATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp CTGCCTCAGGCAAGGGCCTTACTATGGCTTGAGAGATaGTGTAGTCCCTGTACAACAGCCTGGCTTATTCTG +
Preference number: 6 (lower is better)
Translates to: LPQARALLWLER*CSPCTTAWLIL
Trigger: CAGAATAAGCCAGGCTGTTGTACAGGGACTACACCATCTCTCAAGCCATAGTAAGGCCCTTGCCTGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 90 bp GGTGAGCTCACCTCGATAGCCTTGGTGGTTTTCTCAGTCCGGTCTTaGGCAAGGTTAACACCACAGCTGGGACAAATTCGAGGTTTGTGC +
Preference number: 6 (lower is better)
Translates to: GELTSIALVVFSVRS*ARLTPQLGQIRGLC
Trigger: GCACAAACCTCGAATTTGTCCCAGCTGTGGTGTTAACCTTGCCAAAGACCGGACTGAGAAAACCACCAAGGCTATCGAGGTGAGCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp GGAAACATATCGGGCTTGACCTCCACAACTTTCACCTaGGAAGTCCTGTTGGATGGGCCACTTGGTAGCTTC +
Preference number: 6 (lower is better)
Translates to: GNISGLTSTTFT*EVLLDGPLGSF
Trigger: GAAGCTACCAAGTGGCCCATCCAACAGGACTTCTCAGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000514469.1
ENST00000613459.4
CDS TCA 72 bp GGAAACATATCGGGCTTGACCTCCACAACTTTCACCTaGGAAGTCCTGTTGGATGGGCCACTTGGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: GNISGLTSTTFT*EVLLDGPLGSC
Trigger: ACAGCTACCAAGTGGCCCATCCAACAGGACTTCTCAGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513318.1
CDS GCA 72 bp CTGCACACCACTTTTGACGACTGGCGTCTTAGTGACTaGTGTACCACAATTCCCGGGAGCTTCCTTAACCAA +
Preference number: 6 (lower is better)
Translates to: LHTTFDDWRLSD*CTTIPGSFLNQ
Trigger: TTGGTTAAGGAAGCTCCCGGGAATTGTGGTACAGCAGTCACTAAGACGCCAGTCGTCAAAAGTGGTGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS CCA 72 bp TCACCTACTTCTCTGGGAGGAGCTACGTTCAGGAGCTaGCTTACAGCTTCCGAATTCTCCAGAGTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: SPTSLGGATFRS*LTASEFSRVSL
Trigger: CAAACTGACTCTGGAGAATTCGGAAGCTGTAAGCCAGCTCCTGAACGTAGCTCCTCCCAGAGAAGTAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS CCA 72 bp GTACCACAATTCCCGGGAGCTTCCTTAACCAAAACATaGGCATCGGAGATGATCACTTCCTCCCACTCACTC +
Preference number: 6 (lower is better)
Translates to: VPQFPGASLTKT*ASEMITSSHSL
Trigger: GAGTGAGTGGGAGGAAGTGATCATCTCCGATGCCCATGTTTTGGTTAAGGAAGCTCCCGGGAATTGTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502717.6
ENST00000613459.4
CDS CCA 72 bp GCACACCTTGTAGATTTTACCACCTGTGAAGTGACGTaGGGGCCGTATAGCTCTAGCTCCATTCTGTACAGA +
Preference number: 6 (lower is better)
Translates to: AHLVDFTTCEVT*GPYSSSSILYR
Trigger: TCTGTACAGAATGGAGCTAGAGCTATACGGCCCCCACGTCACTTCACAGGTGGTAAAATCTACAAGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000510472.1
ENST00000613459.4
CDS CAA 72 bp GTGAGCCATTCACCAAGGTCTCTTCAATTACCAGGCTaGTCTGGTAAGGTTGGTGGCTCTCCCCTACTTCTA +
Preference number: 6 (lower is better)
Translates to: VSHSPRSLQLPG*SGKVGGSPLLL
Trigger: TAGAAGTAGGGGAGAGCCACCAACCTTACCAGACAAGCCTGGTAATTGAAGAGACCTTGGTGAATGGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp ACCTCGATAGCCTTGGTGGTTTTCTCAGTCCGGTCTTaGGCAAGGTTAACACCACAGCTGGGACAAATTCGA +
Preference number: 6 (lower is better)
Translates to: TSIALVVFSVRS*ARLTPQLGQIR
Trigger: TCGAATTTGTCCCAGCTGTGGTGTTAACCTTGCCAAAGACCGGACTGAGAAAACCACCAAGGCTATCGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp CGTGGACGGAGACTCATAATAATTCGACCAAGAGGTTaGCTCGATGGTGACTGTCTCCTCACTCACGTTGGA +
Preference number: 6 (lower is better)
Translates to: RGRRLIIIRPRG*LDGDCLLTHVG
Trigger: TCCAACGTGAGTGAGGAGACAGTCACCATCGAGCAAACCTCTTGGTCGAATTATTATGAGTCTCCGTCCACG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CAA 72 bp GAGACGATAGCCTTGGTGGTTTTCTCAGTCCGGTCTTaGGCAAGGTTAACACCACAGCTGGGACAAATTCGA +
Preference number: 6 (lower is better)
Translates to: ETIALVVFSVRS*ARLTPQLGQIR
Trigger: TCGAATTTGTCCCAGCTGTGGTGTTAACCTTGCCAAAGACCGGACTGAGAAAACCACCAAGGCTATCGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513318.1
ENST00000514469.1
CDS CAA 90 bp AAGGCACTGCGTGGACGGAGACTCATAATAATTCGACCAAGAGGTTaGCTCGATGGTGACTGTCTCCTCACTCACGTTGGACAAGATAAG +
Preference number: 6 (lower is better)
Translates to: KALRGRRLIIIRPRG*LDGDCLLTHVGQDK
Trigger: CTTATCTTGTCCAACGTGAGTGAGGAGACAGTCACCATCGAGCAAACCTCTTGGTCGAATTATTATGAGTCTCCGTCCACGCAGTGCCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp ACGTTGGACAAGATAAGTCGAGAGCTGTTGAGTTCATaGATCAAGGCGAAGACCTCAGCCAGCTCTGACTCA +
Preference number: 6 (lower is better)
Translates to: TLDKISRELLSS*IKAKTSASSDS
Trigger: TGAGTCAGAGCTGGCTGAGGTCTTCGCCTTGATTCATGAACTCAACAGCTCTCGACTTATCTTGTCCAACGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp TTGATGGACACTCTGGGGTCCTCTCCGAGCTTGATCTaGTTTCTGATTGCAAAAAGCAAGTCCAGGCTTACC +
Preference number: 6 (lower is better)
Translates to: LMDTLGSSPSLI*FLIAKSKSRLT
Trigger: GGTAAGCCTGGACTTGCTTTTTGCAATCAGAAATCAGATCAAGCTCGGAGAGGACCCCAGAGTGTCCATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000514469.1
ENST00000613459.4
CDS GCA 72 bp TCTGGGGTCCTCTCCGAGCTTGATCTGATTTCTGATTaGAAAAAGCAAGTCCAGGCTTACCAGCAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: SGVLSELDLISD*KKQVQAYQQLV
Trigger: AACAAGCTGCTGGTAAGCCTGGACTTGCTTTTTGCAATCAGAAATCAGATCAAGCTCGGAGAGGACCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000514469.1
ENST00000613459.4
CDS CCA 72 bp CACCACAGCTGGGACAAATTCGAGGTTTGTGCCTGTTaGTGTAGACATAGCTACAAGAGGGATTCTTGCACT +
Preference number: 6 (lower is better)
Translates to: HHSWDKFEVCAC*CRHSYKRDSCT
Trigger: AGTGCAAGAATCCCTCTTGTAGCTATGTCTACACCAACAGGCACAAACCTCGAATTTGTCCCAGCTGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000513318.1
ENST00000514469.1
ENST00000613459.4
CDS CAA 90 bp CACATTAAAGAGACGATAGCCTTGGTGGTTTTCTCAGTCCGGTCTTaGGCAAGGTTAACACCACAGCTGGGACAAATTCGAGGTTTGTGC +
Preference number: 6 (lower is better)
Translates to: HIKETIALVVFSVRS*ARLTPQLGQIRGLC
Trigger: GCACAAACCTCGAATTTGTCCCAGCTGTGGTGTTAACCTTGCCAAAGACCGGACTGAGAAAACCACCAAGGCTATCGTCTCTTTAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513318.1
ENST00000514469.1
CDS CAA 90 bp GTCACAAGCCCACCAAAGGCTGAGTGTCATGTTCAAGTCCAGGCCTaGCCACATGCTTCTGTGCAGTTTCTAATACCATGTATTAGAAAC +
Preference number: 6 (lower is better)
Translates to: VTSPPKAECHVQVQA*PHASVQFLIPCIRN
Trigger: GTTTCTAATACATGGTATTAGAAACTGCACAGAAGCATGTGGCAAGGCCTGGACTTGAACATGACACTCAGCCTTTGGTGGGCTTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513318.1
CDS TCA 72 bp TGCAGCTGTACTTATATGGAGGAAACATATCGGGCTTaGCCTCCACAACTTTCACCTGAGAAGTCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: CSCTYMEETYRA*PPQLSPEKSCW
Trigger: CCAACAGGACTTCTCAGGTGAAAGTTGTGGAGGTCAAGCCCGATATGTTTCCTCCATATAAGTACAGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000513318.1
ENST00000514469.1
ENST00000613459.4
CDS CAA 90 bp CGAATTCTCCAGAGTCAGTTTGGAGGCATTTTCCTTAGAGGAATTTaGCTCAGTGGTGACAGGTTGCTGATTTCTTTTCACCACAGAGCC +
Preference number: 6 (lower is better)
Translates to: RILQSQFGGIFLRGI*LSGDRLLISFHHRA
Trigger: GGCTCTGTGGTGAAAAGAAATCAGCAACCTGTCACCACTGAGCAAAATTCCTCTAAGGAAAATGCCTCCAAACTGACTCTGGAGAATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS TCA 72 bp TCCTTAGAGGAATTTTGCTCAGTGGTGACAGGTTGCTaGTTTCTTTTCACCACAGAGCCTTTGGAAGAGACG +
Preference number: 6 (lower is better)
Translates to: SLEEFCSVVTGC*FLFTTEPLEET
Trigger: CGTCTCTTCCAAAGGCTCTGTGGTGAAAAGAAATCAGCAACCTGTCACCACTGAGCAAAATTCCTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4
CDS CCA 72 bp GCCCAAATCCAATGTGACAGTGCAGCTGTACTTATATaGAGGAAACATATCGGGCTTGACCTCCACAACTTT +
Preference number: 6 (lower is better)
Translates to: AQIQCDSAAVLI*RKHIGLDLHNF
Trigger: AAAGTTGTGGAGGTCAAGCCCGATATGTTTCCTCCATATAAGTACAGCTGCACTGTCACATTGGATTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000513318.1
ENST00000514469.1
ENST00000613459.4
CDS CAA 72 bp CAGAGTCAGTTTGGAGGCATTTTCCTTAGAGGAATTTaGCTCAGTGGTGACAGGTTGCTGATTTCTTTTCAC +
Preference number: 6 (lower is better)
Translates to: QSQFGGIFLRGI*LSGDRLLISFH
Trigger: GTGAAAAGAAATCAGCAACCTGTCACCACTGAGCAAAATTCCTCTAAGGAAAATGCCTCCAAACTGACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502717.6
ENST00000503427.5
ENST00000613459.4