Pregenerated sensors for HMGCS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000112972Ensembl transcript IDs: ENST00000325110.11, ENST00000433297.2, ENST00000507004.1, ENST00000507293.1, ENST00000511774.1
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTTATCCACTAGCAACTTTCCACCTAGGTCAAGGATGGCCCCATaGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: QLSTSNFPPRSRMAP*APNSPAPLGCAIGS Trigger: ACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGGCCATCCTTGACCTAGGTGGAAAGTTGCTAGTGGATAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR CCA 90 bp | GAACCTGGTCAAAGACTTCATGGAATTAGTTACCACAGCAGTGACTaGAGTAGAAGGCAGGGCAGAGAAGATCTGAAGTGGGGCCCAACA | + |
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Preference number: 1 (lower is better) Translates to: EPGQRLHGISYHSSD*SRRQGREDLKWGPT Trigger: TGTTGGGCCCCACTTCAGATCTTCTCTGCCCTGCCTTCTACTCCAGTCACTGCTGTGGTAACTAATTCCATGAAGTCTTTGACCAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR GCA 90 bp | AACCCGCCACAGAAGTCTCCTCCTCTTTTGAGGAGACTTACGAAATaGATTTCAGAACTGTCTGCCCAGGTGATGAAAAGAGTAATCAGT | + |
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Preference number: 1 (lower is better) Translates to: NPPQKSPPLLRRLTK*ISELSAQVMKRVIS Trigger: ACTGATTACTCTTTTCATCACCTGGGCAGACAGTTCTGAAATGCATTTCGTAAGTCTCCTCAAAAGAGGAGGAGACTTCTGTGGCGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR GCA 90 bp | TCCTCCTCTTTTGAGGAGACTTACGAAATGCATTTCAGAACTGTCTaGCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTT | + |
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Preference number: 1 (lower is better) Translates to: SSSFEETYEMHFRTV*PGDEKSNQLSTSNF Trigger: AAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCAGACAGTTCTGAAATGCATTTCGTAAGTCTCCTCAAAAGAGGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR GCA 90 bp | ATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTGTTTaGATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGT | + |
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Preference number: 1 (lower is better) Translates to: IKCFNCVTRGQKVAV*ICLGLVSTSKLLIS Trigger: ACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCAAACAGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR TCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCAAGGGCAGAGAAGATCTaGAGTGGGGCCCAACATTTC | + |
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Preference number: 2 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPRAEKI*SGAQHF Trigger: GAAATGTTGGGCCCCACTTCAGATCTTCTCTGCCCT...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCAGCCCATTGCCGGCAATaGACTTTGAGAAAACCCATT | + |
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Preference number: 2 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPAHCRQ*TLRKPI Trigger: AATGGGTTTTCTCAAAGTCCATTGCCGGCAATGGGC...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCACCTTGCTCTGTTGACTaGCACTTCAGTGTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPPCSVD*HFSVSF Trigger: GAAAGAAACACTGAAGTGGCAGTCAACAGAGCAAGG...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR TCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCAAGTATGGTACTGAGTTaGAGCAGGAAGAGATCAGAT | + |
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Preference number: 2 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPSMVLS*SRKRSD Trigger: ATCTGATCTCTTCCTGCTTCAACTCAGTACCATACT...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCATTGCTCTTATTTGATTaGCAGCCCTTAGTCTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPLLLFD*QPLVLA Trigger: AGCTAAGACTAAGGGCTGGCAATCAAATAAGAGCAA...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGACAGTATTTGCAGGCCTaGCCATTGCCGGCAATGGAC | + |
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Preference number: 2 (lower is better) Translates to: ETKEESQYKDGYCQTRHRQYLQA*PLPAMD Trigger: GTCCATTGCCGGCAATGGGCAGGCCTGCAAATACTG...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR TCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCCACGTCAGGGAGGCTaGAGTGAAAGGTATACAGCT | + |
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Preference number: 2 (lower is better) Translates to: HRSETKEESQYKDGYCQTPRQGG*SERYTA Trigger: AGCTGTATACCTTTCACTTCAGCCTCCCTGACGTGG...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTCAGAAAGTGGCTGTTTaGATCTGTTTGGGTCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: NAREGRVGEDILSLGEYGQKVAV*ICLGLV Trigger: CACTAGACCCAAACAGATGCAAACAGCCACTTTCTG...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CCA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGAGAGTACATTTGGCATTaGCCAGACCACAACAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ETKEESQYKDGYCQTRHREYIWH*PDHNRK Trigger: CTTCCTGTTGTGGTCTGGCCAATGCCAAATGTACTC...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGCAAGAGGACAGAAAGTaGCTGTTTGCATCTGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRQEDRK*LFASVW Trigger: CCAAACAGATGCAAACAGCCACTTTCTGTCCTCTTG...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR TCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGATGGCCAAAGAGGTATaGAGTTTTACAGAGCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRMAKEV*SFTEPL Trigger: TAAGGGCTCTGTAAAACTTCATACCTCTTTGGCCAT...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR TCA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTGAGAGGGGGAAAGATTaGATTCTTAAAGCCATACTA | + |
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Preference number: 2 (lower is better) Translates to: NAREGRVGEDILSLGEYGERGKD*ILKAIL Trigger: TAGTATGGCTTTAAGAATTCAATCTTTCCCCCTCTC...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTCCAATTTTACCACACTaGGGAATGTTGTCACATTCC | + |
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Preference number: 2 (lower is better) Translates to: SRQEIKCFNCVTRGQKVAPILPH*GMLSHS Trigger: GGAATGTGACAACATTCCCCAGTGTGGTAAAATTGG...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR TCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGAAATTTGCTCTTATTTaGTTGCCAGCCCTTAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRKFALI*LPALSL Trigger: AAGACTAAGGGCTGGCAATCAAATAAGAGCAAATTT...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAAAGCCTAATAATGCCCTaGCCCTATTCTTCCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: CICLGLVSTSKLLISIHKSLIMP*PYSSLP Trigger: TGGAAGGGAAGAATAGGGGCAGGGCATTATTAGGCT...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGCATCATGCATACAAATaGCCAAAGAGGTATGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRHHAYK*PKRYEV Trigger: AACTTCATACCTCTTTGGCCATTTGTATGCATGATG...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR CAA 90 bp | TTCAACTGTGTCACAAGAGGACAGAAAGTGGCTGTTTGCATCTGTTaGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAA | + |
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Preference number: 2 (lower is better) Translates to: FNCVTRGQKVAVCIC*GLVSTSKLLISIHK Trigger: TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCAAACAGCCACTTTCTGTCCTCTTGTGACACAGTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGAAAAACCAAACATCATaGATACAAATGGCCAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRKNQTS*IQMAKE Trigger: CTCTTTGGCCATTTGTATGCATGATGTTTGGTTTTT...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCTAATCCAAAATTACTaGCAATGCAGGGATTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: HRSETKEESQYKDGYCQTLIQNY*QCRDSF Trigger: GAAGGAATCCCTGCATTGGCAGTAATTTTGGATTAG...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAACAGAAGCCTCTTCAATaGCAGTGTTTCTCTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: CICLGLVSTSKLLISIHKQKPLQ*QCFSVQ Trigger: CTGAACAGAGAAACACTGCCATTGAAGAGGCTTCTG...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTTTTTCAAAGGGTTTGTaGGTATCACATTTTACCACA | + |
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Preference number: 2 (lower is better) Translates to: SRQEIKCFNCVTRGQKVAFSKGL*VSHFTT Trigger: TGTGGTAAAATGTGATACGCACAAACCCTTTGAAAA...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTCAAAATTACTGCCAATaGAGGGATTCCTTCTATAAA | + |
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Preference number: 2 (lower is better) Translates to: SRQEIKCFNCVTRGQKVAQNYCQ*RDSFYK Trigger: TTTATAGAAGGAATCCCTGCATTGGCAGTAATTTTG...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCACATTTTCAAATTTCTaGCTTAAACAGAGCACCTTG | + |
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Preference number: 2 (lower is better) Translates to: HRSETKEESQYKDGYCQTTFSNF*LKQSTL Trigger: CAAGGTGCTCTGTTTAAGGCAGAAATTTGAAAATGT...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR TCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAAGCTTGCCACGCAATTTaGGAGTTAATTTCTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: CICLGLVSTSKLLISIHKACHAI*ELISLF Trigger: AAACAAAGAAATTAACTCTCAAATTGCGTGGCAAGC...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR GCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAAAGCAAAGTCTATATATaGTTGCCACGCAATTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: CICLGLVSTSKLLISIHKSKVYI*LPRNLR Trigger: TCTCAAATTGCGTGGCAAGCATATATAGACTTTGCT...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CAA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCAGAGTATGGTACTGAGTaGAAGCAGGAAGAGATCAGA | + |
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Preference number: 3 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPEYGTE*KQEEIR Trigger: TCTGATCTCTTCCTGCTTCAACTCAGTACCATACTC...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR CCA 72 bp | GACTGGAGTAGAAGGCAGGGCAGAGAAGATCTGAAGTaGGGCCCAACATTTCTGATGCGTAGATCAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: DWSRRQGREDLK*GPTFLMRRSKA Trigger: AGCCTTTGATCTACGCATCAGAAATGTTGGGCCCCACTTCAGATCTTCTCTGCCCTGCCTTCTACTCCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CAA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGAACTCCCCTGCACCTTaGGGCTGTGCAATTGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRNSPAP*GCAIGS Trigger: ACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTT...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CAA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTCGAGTACATTTGGCATaGGCCAGACCACAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: NAREGRVGEDILSLGEYGRVHLA*ARPQQE Trigger: TTCCTGTTGTGGTCTGGCCAATGCCAAATGTACTCG...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CAA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTGTTACCCTTGCTCTGTaGACTGCCACTTCAGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: NAREGRVGEDILSLGEYGVTLAL*TATSVF Trigger: AAACACTGAAGTGGCAGTCAACAGAGCAAGGGTAAC...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR CCA 72 bp | CAAAGACTTCATGGAATTAGTTACCACAGCAGTGACTaGAGTAGAAGGCAGGGCAGAGAAGATCTGAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: QRLHGISYHSSD*SRRQGREDLKW Trigger: CCACTTCAGATCTTCTCTGCCCTGCCTTCTACTCCAGTCACTGCTGTGGTAACTAATTCCATGAAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR TCA 72 bp | CAAACAAGTTCTGCAGACATTCCACGTCAGGGAGGCTaGAGTGAAAGGTATACAGCTAGAATCCAAAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: QTSSADIPRQGG*SERYTARIQRE Trigger: CTCTCTTTGGATTCTAGCTGTATACCTTTCACTTCAGCCTCCCTGACGTGGAATGTCTGCAGAACTTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR TCA 72 bp | TATTGCCAAACCCGCCACAGAAGTCTCCTCCTCTTTTaGGGAGACTTACGAAATGCATTTCAGAACTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: YCQTRHRSLLLF*GDLRNAFQNCL Trigger: CAGACAGTTCTGAAATGCATTTCGTAAGTCTCCTCAAAAGAGGAGGAGACTTCTGTGGCGGGTTTGGCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CAA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCATGGGACTTTTAGGTaGGAGACTCTAGCTGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: HRSETKEESQYKDGYCQTHGTFR*ETLAGS Trigger: ACTACCAGCTAGAGTCTCCAACCTAAAAGTCCCATG...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR GCA 72 bp | TTCAACTGTGTCACAAGAGGACAGAAAGTGGCTGTTTaGATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: FNCVTRGQKVAV*ICLGLVSTSKL Trigger: TAACTTTGAGGTTGACACTAGACCCAAACAGATGCAAACAGCCACTTTCTGTCCTCTTGTGACACAGTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR TCA 72 bp | CAGGAAGAGATCAGATCCCACAGGAGTCTGCAAGGCTaGATAAGGAATATACATAGAATGAATAGTGCTTAC | + |
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Preference number: 3 (lower is better) Translates to: QEEIRSHRSLQG*IRNIHRMNSAY Trigger: GTAAGCACTATTCATTCTATGTATATTCCTTATTCAGCCTTGCAGACTCCTGTGGGATCTGATCTCTTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CAA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGACGTTCACCACTAAATTaGCTCTTATTTGATTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: ETKEESQYKDGYCQTRHRRSPLN*LLFDCQ Trigger: CTGGCAATCAAATAAGAGCAAATTTAGTGGTGAACG...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CAA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTTGCTTGCCACGCAATTaGAGAGTTAATTTCTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: SRQEIKCFNCVTRGQKVACLPRN*RVNFFV Trigger: AACAAAGAAATTAACTCTCAAATTGCGTGGCAAGCA...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CAA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGAAAAGTCTATATATGCTaGCCACGCAATTTGAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: ETKEESQYKDGYCQTRHRKVYIC*PRNLRV Trigger: AACTCTCAAATTGCGTGGCAAGCATATATAGACTTT...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR-3UTR CAA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCTATTTTCAAAGGGTTaGTGCGTATCACATTTTACC | + |
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Preference number: 3 (lower is better) Translates to: HRSETKEESQYKDGYCQTLFSKG*CVSHFT Trigger: GGTAAAATGTGATACGCACAAACCCTTTGAAAATAG...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR TCA 72 bp | CAGCTAGAATCCAAAGAGAGGTACTATCATATTCTCTaGGAACCTGGTCAAAGACTTCATGGAATTAGTTAC | + |
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Preference number: 3 (lower is better) Translates to: QLESKERYYHIL*EPGQRLHGISY Trigger: GTAACTAATTCCATGAAGTCTTTGACCAGGTTCTCAGAGAATATGATAGTACCTCTCTTTGGATTCTAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCAGCAGAGGAAAGGGAGTaGGCCACGAAAGGACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPAEERE*ATKGQS Trigger: GGACTGTCCTTTCGTGGCTCACTCCCTTTCCTCTGC...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCAGAAGCGATCCCAGGATaGAAGAGAGATGCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPEAIPG*KRDAQE Trigger: CTCCTGTGCATCTCTCTTGCATCCTGGGATCGCTTC...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCAGTGATCCAGGCATGGTaGAAGAGCTGTGTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPVIQAW*KSCVKD Trigger: ATCCTTCACACAGCTCTTTCACCATGCCTGGATCAC...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCATGTCATCATTTGGAGTaGGACGCCGAGCGTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPCHHLE*DAERKF Trigger: GAACTTACGCTCGGCGTCCCACTCCAAATGATGACA...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGCTTCGGGCACAAGCGTaGCCGAGCGGCAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRLRAQA*PSGSRG Trigger: TCCTCTGCTGCCGCTCGGTCACGCTTGTGCCCGAAG...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCATACTATCATATTCTCTaGGAACCTGGTCAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPYYHIL*EPGQRL Trigger: AAGTCTTTGACCAGGTTCTCAGAGAATATGATAGTA...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCATTTTCAAAGGGTTTGTaGGTATCACATTTTACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPFSKGL*VSHFTT Trigger: TGTGGTAAAATGTGATACGCACAAACCCTTTGAAAA...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGCAGTATTTGCAGGCCTaGCCATTGCCGGCAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRQYLQA*PLPAMD Trigger: GTCCATTGCCGGCAATGGGCAGGCCTGCAAATACTG...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGAGGGCAGAGAAGATCTaGAGTGGGGCCCAACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRRAEKI*SGAQHF Trigger: GAAATGTTGGGCCCCACTTCAGATCTTCTCTGCCCT...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGACACCTAGGTCAAGGATaGCCCCATGGGCACCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: ETKEESQYKDGYCQTRHRHLGQG*PHGHLT Trigger: AGTTAGGTGCCCATGGGGCCATCCTTGACCTAGGTG...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTTACCACAGCAGTGACTaGAGTAGAAGGCAGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRQEIKCFNCVTRGQKVAYHSSD*SRRQGR Trigger: TCTGCCCTGCCTTCTACTCCAGTCACTGCTGTGGTA...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGACAAAGTGTCATCATTTaGAGTGGGACGCCGAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETKEESQYKDGYCQTRHRQSVII*SGTPSV Trigger: TACGCTCGGCGTCCCACTCCAAATGATGACACTTTG...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGGAGTACATTTGGCATTaGCCAGACCACAACAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CPGDEKSNQLSTSNFPPREYIWH*PDHNRK Trigger: CTTCCTGTTGTGGTCTGGCCAATGCCAAATGTACTC...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTAGTATGGTACTGAGTTaGAGCAGGAAGAGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NAREGRVGEDILSLGEYGSMVLS*SRKRSD Trigger: ATCTGATCTCTTCCTGCTTCAACTCAGTACCATACT...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTCCCACCCTGAAGTCTTaGACCTCACAGAGTATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SRQEIKCFNCVTRGQKVAPTLKS*TSQSIL Trigger: TAAGATACTCTGTGAGGTGCAAGACTTCAGGGTGGG...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTAGCCTAATAATGCCCTaGCCCTATTCTTCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRQEIKCFNCVTRGQKVASLIMP*PYSSLP Trigger: TGGAAGGGAAGAATAGGGGCAGGGCATTATTAGGCT...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTTGCACCTTTGGGCTGTaGAATTGGGAGTACCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SRQEIKCFNCVTRGQKVACTFGL*NWEYQT Trigger: TGTTTGGTACTCCCAATTGCACAGCCCAAAGGTGCA...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTAATTCCCACATCTTTTaGCCAGCAAGCTTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NAREGRVGEDILSLGEYGNSHIF*PASFCI Trigger: AATGCAGAAGCTTGCTGGCCAAAAGATGTGGGAATT...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTCCAATTTTACCACACTaGGGAATGTTGTCACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NAREGRVGEDILSLGEYGPILPH*GMLSHS Trigger: GGAATGTGACAACATTCCCCAGTGTGGTAAAATTGG...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGCAGAAGCCTCTTCAATaGCAGTGTTTCTCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRQKPLQ*QCFSVQ Trigger: CTGAACAGAGAAACACTGCCATTGAAGAGGCTTCTG...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTAGTCTTCACAGACTTTaGTTTGTCGATGATTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NAREGRVGEDILSLGEYGSLHRL*FVDDCL Trigger: GAGACAATCATCGACAAATCAAAGTCTGTGAAGACT...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTGTGAGTGAAAGATCATaGAGCCAAAATCATTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NAREGRVGEDILSLGEYGVSERS*SQNHSR Trigger: CCTTGAATGATTTTGGCTTCATGATCTTTCACTCAC...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAACCACGTCAGGGAGGCTaGAGTGAAAGGTATACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKPRQGG*SERYTA Trigger: AGCTGTATACCTTTCACTTCAGCCTCCCTGACGTGG...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTAGAGATGCACAGGAGTaGAACAAAAGAGGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRQEIKCFNCVTRGQKVARDAQE*NKRGKP Trigger: TGGCTTTCCTCTTTTGTTTCACTCCTGTGCATCTCT...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTCTAATCCAAAATTACTaGCAATGCAGGGATTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NAREGRVGEDILSLGEYGLIQNY*QCRDSF Trigger: GAAGGAATCCCTGCATTGGCAGTAATTTTGGATTAG...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTCAGAAAGTGGCTGTTTaGATCTGTTTGGGTCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRQEIKCFNCVTRGQKVAQKVAV*ICLGLV Trigger: CACTAGACCCAAACAGATGCAAACAGCCACTTTCTG...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCGTACCAAACAAGTTCTaGAGACATTCCACGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRSETKEESQYKDGYCQTVPNKF*RHSTSG Trigger: CCCTGACGTGGAATGTCTGCAGAACTTGTTTGGTAC...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGTATAAGGATGGTTATTaGCAAACCCGCCACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRYKDGY*QTRHRS Trigger: ACTTCTGTGGCGGGTTTGGCAATAACCATCCTTATA...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGAGGATGCAAGAGAGATaGACAGGAGTGAAACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRRMQER*TGVKQK Trigger: CTTTTGTTTCACTCCTGTGCATCTCTCTTGCATCCT...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCGCCCATTGCCGGCAATaGACTTTGAGAAAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HRSETKEESQYKDGYCQTAHCRQ*TLRKPI Trigger: AATGGGTTTTCTCAAAGTCCATTGCCGGCAATGGGC...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR CAA 72 bp | TTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTGTTaGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FQLCHKRTESGC*HLFGSSVNLKV Trigger: AACTTTGAGGTTGACACTAGACCCAAACAGATGCAAACAGCCACTTTCTGTCCTCTTGTGACACAGTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCTGCATTCAAAGGAAGTaGTCCAGGCATGGTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRSETKEESQYKDGYCQTCIQRK*SRHGER Trigger: TCTTTCACCATGCCTGGATCACTTCCTTTGAATGCA...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAAAGCGGTCTAATGCACTaGGGTAGCACTGTATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKSGLMH*GSTVWR Trigger: TCTCCATACAGTGCTACCTCAGTGCATTAGACCGCT...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCTCATTTCCCTCTTTCTaGCACTGGGCATGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRSETKEESQYKDGYCQTSFPSF*HWAWIF Trigger: AAAGATCCATGCCCAGTGGCAGAAAGAGGGAAATGA...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAAGGTGAAAGAGCTGTGTaGAGGATAGAGAACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKGERAV*RIENCS Trigger: ACTGCAGTTCTCTATCCTTCACACAGCTCTTTCACC...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCATGGCCAAAGAGGTATaGAGTTTTACAGAGCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HRSETKEESQYKDGYCQTMAKEV*SFTEPL Trigger: TAAGGGCTCTGTAAAACTTCATACCTCTTTGGCCAT...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTACATTTTCAAATTTCTaGCTTAAACAGAGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NAREGRVGEDILSLGEYGTFSNF*LKQSTL Trigger: CAAGGTGCTCTGTTTAAGGCAGAAATTTGAAAATGT...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTTTGCTCTTATTTGATTaGCAGCCCTTAGTCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRQEIKCFNCVTRGQKVALLLFD*QPLVLA Trigger: AGCTAAGACTAAGGGCTGGCAATCAAATAAGAGCAA...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAAAGTCTCCTCCTCTTTTaGGGAGACTTACGAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKSLLLF*GDLRNA Trigger: TGCATTTCGTAAGTCTCCTCAAAAGAGGAGGAGACT...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR GCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAACTTCCAGCCGCCCAATaGAATCATAGGAAAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKLPAAQ*NHRKGY Trigger: ATAACCTTTCCTATGATTGCATTGGGCGGCTGGAAG...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAACAAGAGGACAGAAAGTaGCTGTTTGCATCTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKQEDRK*LFASVW Trigger: CCAAACAGATGCAAACAGCCACTTTCTGTCCTCTTG...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR TCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCAAATTTGCTCTTATTTaGTTGCCAGCCCTTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRSETKEESQYKDGYCQTKFALI*LPALSL Trigger: AAGACTAAGGGCTGGCAATCAAATAAGAGCAAATTT...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
||
| CDS-3UTR GCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAACATTTCAGAACTGTCTaGCCAGGTGATGAAAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKHFRTV*PGDEKS Trigger: ACTCTTTTCATCACCTGGGCAGACAGTTCTGAAATG...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| 3UTR CAA 72 bp | TTTAAATTATTTAAAGATCCTGTTACCCTTGCTCTGTaGACTGCCACTTCAGTGTTTCTTTCAGGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKLFKDPVTLAL*TATSVFLSGHS Trigger: GGAGTGTCCTGAAAGAAACACTGAAGTGGCAGTCAACAGAGCAAGGGTAACAGGATCTTTAAATAATTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
||
| CDS-3UTR GCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAAGTTGCTATGTTTGAATaGACAAGTCCTACTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKVAMFE*TSPTPS Trigger: TGAAGGAGTAGGACTTGTGCATTCAAACATAGCAAC...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
||
| CDS-3UTR GCA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCAAAATTACTGCCAATaGAGGGATTCCTTCTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRSETKEESQYKDGYCQTQNYCQ*RDSFYK Trigger: TTTATAGAAGGAATCCCTGCATTGGCAGTAATTTTG...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
||
| CDS-3UTR CCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAACATCATGCATACAAATaGCCAAAGAGGTATGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKHHAYK*PKRYEV Trigger: AACTTCATACCTCTTTGGCCATTTGTATGCATGATG...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CCA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAATATTCTCTGAGAACCTaGTCAAAGACTTCATGGAAT | + |
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Preference number: 4 (lower is better) Translates to: CICLGLVSTSKLLISIHKYSLRT*SKTSWN Trigger: ATTCCATGAAGTCTTTGACCAGGTTCTCAGAGAATA...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS TCA 90 bp | TGCAGTCTCCAGGTCTGTCACTGTTTCCTCCTTCGGGCACAAGCGTaGCCGAGCGGCAGCAGAGGAAAGGGAGTGAGCCACGAAAGGACA | + |
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Preference number: 5 (lower is better) Translates to: CSLQVCHCFLLRAQA*PSGSRGKGVSHERT Trigger: TGTCCTTTCGTGGCTCACTCCCTTTCCTCTGCTGCCGCTCGGTCACGCTTGTGCCCGAAGGAGGAAACAGTGACAGACCTGGAGACTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325110.11 ENST00000507293.1 |
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| CDS-3UTR CAA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCACAATTCCCACATCTTTaGGCCAGCAAGCTTCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPQFPHL*ASKLLH Trigger: ATGCAGAAGCTTGCTGGCCAAAAGATGTGGGAATTG...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCACTTTCTTGGCAGGGCTaGGAATATGCTCAGTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPLSWQG*EYAQLL Trigger: TAGCAACTGAGCATATTCCAAGCCCTGCCAAGAAAG...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS TCA 90 bp | AATTCCCACATCTTTTGGCCAGCAAGCTTCTGCATTCAAAGGAAGTaGTCCAGGCATGGTGAAAGAGCAAGCGTGACCGAGCGGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: NSHIFWPASFCIQRK*SRHGERASVTERQQ Trigger: CTGCTGCCGCTCGGTCACGCTTGCTCTTTCACCATGCCTGGATCACTTCCTTTGAATGCAGAAGCTTGCTGGCCAAAAGATGTGGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433297.2 ENST00000507004.1 |
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| CDS TCA 90 bp | AATTCCCACATCTTTTGGCCAGCAAGCTTCTGCATTCAAAGGAAGTaGTCCAGGCATGGTGAAAGAGCTCTAGGCGGTCACAGCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: NSHIFWPASFCIQRK*SRHGERALGGHSCL Trigger: GAGGCAGCTGTGACCGCCTAGAGCTCTTTCACCATGCCTGGATCACTTCCTTTGAATGCAGAAGCTTGCTGGCCAAAAGATGTGGGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511774.1 |
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| CDS TCA 90 bp | TTGGCCAGCAAGCTTCTGCATTCAAAGGAAGTGATCCAGGCATGGTaGAAGAGCTGTGTGAAGGATAGAGAACTGCAGTCTCCAGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: LASKLLHSKEVIQAW*KSCVKDRELQSPGL Trigger: CAGACCTGGAGACTGCAGTTCTCTATCCTTCACACAGCTCTTTCACCATGCCTGGATCACTTCCTTTGAATGCAGAAGCTTGCTGGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325110.11 ENST00000507293.1 |
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| CDS-3UTR CAA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCATTTTTCCAACTCTGCTaGATCAACATATTGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPFFQLC*INILRR Trigger: CCTTCTCAATATGTTGATCAAGCAGAGTTGGAAAAA...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCACTATTTTCAAAGGGTTaGTGCGTATCACATTTTACC | + |
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Preference number: 5 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPLFSKG*CVSHFT Trigger: GGTAAAATGTGATACGCACAAACCCTTTGAAAATAG...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | CCCCATGGGCACCTAACTCCCCTGCACCTTTGGGCTGTGCAATTGGGAGTACCAAAAGTCTATATATGCTaGCCACGCAATTTGAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: PHGHLTPLHLWAVQLGVPKVYIC*PRNLRV Trigger: AACTCTCAAATTGCGTGGCAAGCATATATAGACTTT...TGGTACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTTAGGTGCCCATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | AGCAGACAAGAGATAAAGTGTTTCAACTGTGTCACAAGAGGACAGAAAGTGGCTAACTCCCCTGCACCTTaGGGCTGTGCAATTGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: SRQEIKCFNCVTRGQKVANSPAP*GCAIGS Trigger: ACTCCCAATTGCACAGCCCAAAGGTGCAGGGGAGTT...AGCCACTTTCTGTCCTCTTGTGACACAGTTGAAACACTTTATCTCTTGTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | CACAGGAGTGAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCCAAAGTGTCATCATTaGGAGTGGGACGCCGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: HRSETKEESQYKDGYCQTPKCHH*EWDAER Trigger: ACGCTCGGCGTCCCACTCCAAATGATGACACTTTGG...GGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTCACTCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | AATGCAAGAGAAGGGAGAGTGGGTGAAGACATACTAAGCCTTGGTGAGTATGGTCATGGGACTTTTAGGTaGGAGACTCTAGCTGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: NAREGRVGEDILSLGEYGHGTFR*ETLAGS Trigger: ACTACCAGCTAGAGTCTCCAACCTAAAAGTCCCATG...ACCATACTCACCAAGGCTTAGTATGTCTTCACCCACTCTCCCTTCTCTTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGAGCTGTTTGCATCTGTTaGGGTCTAGTGTCAACCTCA | + |
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Preference number: 5 (lower is better) Translates to: ETKEESQYKDGYCQTRHRAVCIC*GLVSTS Trigger: TGAGGTTGACACTAGACCCAAACAGATGCAAACAGC...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGAGTTACCCTTGCTCTGTaGACTGCCACTTCAGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: ETKEESQYKDGYCQTRHRVTLAL*TATSVF Trigger: AAACACTGAAGTGGCAGTCAACAGAGCAAGGGTAAC...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAACCCCACCCTGAAGTCTaGCACCTCACAGAGTATCTT | + |
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Preference number: 5 (lower is better) Translates to: CICLGLVSTSKLLISIHKPHPEV*HLTEYL Trigger: AAGATACTCTGTGAGGTGCAAGACTTCAGGGTGGGG...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGAACAGAAAGTGGCTGTTaGCATCTGTTTGGGTCTAGT | + |
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Preference number: 5 (lower is better) Translates to: ETKEESQYKDGYCQTRHRTESGC*HLFGSS Trigger: ACTAGACCCAAACAGATGCAAACAGCCACTTTCTGT...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGAAAGTCTCCTCCTCTTTaGAGGAGACTTACGAAATGC | + |
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Preference number: 5 (lower is better) Translates to: ETKEESQYKDGYCQTRHRKSPPL*RRLTKC Trigger: GCATTTCGTAAGTCTCCTCAAAAGAGGAGGAGACTT...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | TGCCCAGGTGATGAAAAGAGTAATCAGTTATCCACTAGCAACTTTCCACCTAGGCGTTCACCACTAAATTaGCTCTTATTTGATTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: CPGDEKSNQLSTSNFPPRRSPLN*LLFDCQ Trigger: CTGGCAATCAAATAAGAGCAAATTTAGTGGTGAACG...CCTAGGTGGAAAGTTGCTAGTGGATAACTGATTACTCTTTTCATCACCTGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | GAAACAAAAGAGGAAAGCCAATATAAGGATGGTTATTGCCAAACCCGCCACAGACAAAGAGTGAATCTATaGAACCCTGGGGAATATAGT | + |
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Preference number: 5 (lower is better) Translates to: ETKEESQYKDGYCQTRHRQRVNL*NPGEYS Trigger: ACTATATTCCCCAGGGTTCAATAGATTCACTCTTTG...TCTGTGGCGGGTTTGGCAATAACCATCCTTATATTGGCTTTCCTCTTTTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS-3UTR CAA 90 bp | TGCATCTGTTTGGGTCTAGTGTCAACCTCAAAGTTACTCATTAGTATCCATAAAATGAAAGTCATTTATTaGAGAAGCGATCCCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: CICLGLVSTSKLLISIHKMKVIY*RSDPRM Trigger: CATCCTGGGATCGCTTCTCAAATAAATGACTTTCAT...TTTATGGATACTAATGAGTAACTTTGAGGTTGACACTAGACCCAAACAGATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325110.11 |
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| CDS GCA 72 bp | TCCAGGCATGGTGAAAGAGCTCTAGGCGGTCACAGCTaGCTCTCTGGCACCTCCAACTCCTCTGTCGTTAGA | + |
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Preference number: 6 (lower is better) Translates to: SRHGERALGGHS*LSGTSNSSVVR Trigger: TCTAACGACAGAGGAGTTGGAGGTGCCAGAGAGGCAGCTGTGACCGCCTAGAGCTCTTTCACCATGCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511774.1 |
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| CDS TCA 72 bp | AAGCTTCTGCATTCAAAGGAAGTGATCCAGGCATGGTaGAAGAGCTGTGTGAAGGATAGAGAACTGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: KLLHSKEVIQAW*KSCVKDRELQS Trigger: AGACTGCAGTTCTCTATCCTTCACACAGCTCTTTCACCATGCCTGGATCACTTCCTTTGAATGCAGAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325110.11 ENST00000507293.1 |
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| CDS CAA 90 bp | ATTGAGAAGGAAAATAGATCTCAAGGGCAACAATTCCCACATCTTTaGGCCAGCAAGCTTCTGCATTCAAAGGAAGTGATCCAGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: IEKENRSQGQQFPHL*ASKLLHSKEVIQAW Trigger: CCATGCCTGGATCACTTCCTTTGAATGCAGAAGCTTGCTGGCCAAAAGATGTGGGAATTGTTGCCCTTGAGATCTATTTTCCTTCTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000325110.11 ENST00000433297.2 ENST00000507004.1 ENST00000507293.1 ENST00000511774.1 |
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