RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HMGCR (Homo sapiens)

Ensembl gene IDs: ENSG00000113161

Ensembl transcript IDs: ENST00000287936.9, ENST00000343975.9, ENST00000442032.2, ENST00000508070.1, ENST00000509085.5, ENST00000509431.1, ENST00000511206.5, ENST00000511986.1, ENST00000512053.1, ENST00000514315.2, ENST00000679456.1, ENST00000680160.1, ENST00000680940.1, ENST00000681271.1, ENST00000681410.1, ENST00000681567.1

Found 1322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTTTCACTTCTGCAGAGTCACAAGCACGTGGAAGACGCACAACTaGGCCACGAGTCATCCCATCTGCAAGGACTCGGCTGCTGGCACC +
Preference number: 1 (lower is better)
Translates to: GFHFCRVTSTWKTHN*ATSHPICKDSAAGT
Trigger: GGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAAGTGAAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR TCA 90 bp CTAGGCACAGTTCTAGGGCCATTCACGTGGCTCCTTCACTGGCTCTaGAAGCTGACTTTCCCTTTCATTAGGCTCGGCAAGCAAGCCAGG +
Preference number: 1 (lower is better)
Translates to: LGTVLGPFTWLLHWL*KLTFPFIRLGKQAR
Trigger: CCTGGCTTGCTTGCCGAGCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGTGAAGGAGCCACGTGAATGGCCCTAGAACTGTGCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CCA 90 bp GTTAGCTGGCGCGCACACACATACACACCTTGTATGCTTAGCAGCTaGCACAAGGCCCTCCTACTTTTATGCTCCCTGCCAACTGGCTTC +
Preference number: 1 (lower is better)
Translates to: VSWRAHTYTPCMLSS*HKALLLLCSLPTGF
Trigger: GAAGCCAGTTGGCAGGGAGCATAAAAGTAGGAGGGCCTTGTGCCAGCTGCTAAGCATACAAGGTGTGTATGTGTGTGCGCGCCAGCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CCA 90 bp AGATGTTTCGAGCCAGGCTTTCACTTCTGCAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCCACGAGTCATCCCATCTGCAAGGAC +
Preference number: 1 (lower is better)
Translates to: RCFEPGFHFCRVTST*KTHNWATSHPICKD
Trigger: GTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGGCTCGAAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 90 bp TATCACTGCGAACCCTTCAGATGTTTCGAGCCAGGCTTTCACTTCTaGAGAGTCACAAGCACGTGGAAGACGCACAACTGGGCCACGAGT +
Preference number: 1 (lower is better)
Translates to: YHCEPFRCFEPGFHF*RVTSTWKTHNWATS
Trigger: ACTCGTGGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGGCTCGAAACATCTGAAGGGTTCGCAGTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR TCA 90 bp CTGAGAAAGCTAAGAGCGTTCGTGGGTCCATCAAAGAGCCCTGTGTaGATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACA +
Preference number: 1 (lower is better)
Translates to: LRKLRAFVGPSKSPV*MFQSPTSWPQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGGCTCTTTGATGGACCCACGAACGCTCTTAGCTTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 90 bp GTGCAGGGAACAAACAGGAGGGTAAACGGAATAGGTGATGGCAAATaGCTCTCTCTGGGGCAGTCACTCCACAGGTTGAAGAGATGGAGA +
Preference number: 1 (lower is better)
Translates to: VQGTNRRVNGIGDGK*LSLGQSLHRLKRWR
Trigger: TCTCCATCTCTTCAACCTGTGGAGTGACTGCCCCAGAGAGAGGCATTTGCCATCACCTATTCCGTTTACCCTCCTGTTTGTTCCCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 90 bp GTATGCTTAGCAGCTGGCACAAGGCCCTCCTACTTTTATGCTCCCTaGCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCCTGG +
Preference number: 1 (lower is better)
Translates to: VCLAAGTRPSYFYAP*QLASELANWNAVAW
Trigger: CCAGGCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAGTAGGAGGGCCTTGTGCCAGCTGCTAAGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 90 bp TGCTGGCACCTCCACCAAGACCTATTGCTCTGCAGCCTCTATTGGTaGTGGCCACAAGACAACCTTCTGTTGTTGCCATTGGAACCTGAA +
Preference number: 1 (lower is better)
Translates to: CWHLHQDLLLCSLYW*WPQDNLLLLPLEPE
Trigger: TTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGAGGTGCCAGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR CCA 90 bp GAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTaGGTAAATGCACACTCATTTGAGAGCCGCAGTATTAAAGCCATC +
Preference number: 1 (lower is better)
Translates to: EIAGAGPSSLFKQVL*VNAHSFESRSIKAI
Trigger: GATGGCTTTAATACTGCGGCTCTCAAATGAGTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 90 bp CTGAAATTCCAACCTATTAGTGCAGCAGCAGCAGCAACTGTTAACTaGCACGTTCCGGCCCCACCCCAGAACAAGAGAATCAGAAATCGC +
Preference number: 1 (lower is better)
Translates to: LKFQPISAAAAATVN*HVPAPPQNKRIRNR
Trigger: GCGATTTCTGATTCTCTTGTTCTGGGGTGGGGCCGGAACGTGGCAGTTAACAGTTGCTGCTGCTGCTGCACTAATAGGTTGGAATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 90 bp TGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTaGCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTA +
Preference number: 1 (lower is better)
Translates to: CSLPTGFRISQLECC*LGLILLQHYNPGTL
Trigger: TAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATaGTGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGG +
Preference number: 1 (lower is better)
Translates to: LLCSLPTGFRISQLE*CCLGLILLQHYNPG
Trigger: CCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 90 bp ACACAATTCGGGCAAGCTGCCGGGCATTTTCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTAGCATCTGCAAACAGGCTTGCTGAG +
Preference number: 1 (lower is better)
Translates to: TQFGQAAGHFPQDYL*MLLEHLASANRLAE
Trigger: CTCAGCAAGCCTGTTTGCAGATGCTAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR TCA 90 bp CATGTGACTTTTGACAAGATGTCCTGCTGCCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTACGGTCCCACACACAATTCGGGCAAG +
Preference number: 1 (lower is better)
Translates to: HVTFDKMSCCQCCHK*QFPSHYGPTHNSGK
Trigger: CTTGCCCGAATTGTGTGTGGGACCGTAATGGCTGGGGAATTGTCACTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAAAGTCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 90 bp ACACCTTGTATGCTTAGCAGCTGGCACAAGGCCCTCCTACTTTTATaGTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGT +
Preference number: 1 (lower is better)
Translates to: TPCMLSSWHKALLLL*SLPTGFRISQLECC
Trigger: ACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAGTAGGAGGGCCTTGTGCCAGCTGCTAAGCATACAAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CCA 90 bp TGGCACCTCCACCAAGACCTATTGCTCTGCAGCCTCTATTGGTGCTaGCCACAAGACAACCTTCTGTTGTTGCCATTGGAACCTGAAATT +
Preference number: 1 (lower is better)
Translates to: WHLHQDLLLCSLYWC*PQDNLLLLPLEPEI
Trigger: AATTTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGAGGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 90 bp TCCCCATGGCATCCCCTGACCTGGACTGGAAACGGATATAAAGGTTaGGTCCAGCTATACTTGTATGAAGTTTCTGTAGACGTGCAAATC +
Preference number: 1 (lower is better)
Translates to: SPWHPLTWTGNGYKG*VQLYLYEVSVDVQI
Trigger: GATTTGCACGTCTACAGAAACTTCATACAAGTATAGCTGGACGCAACCTTTATATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR TCA 90 bp ACAAGCTGGGAAGAAAGTCATGAACACGAAGTAGTTGGCAAGAACTaGCATGCAGCCAAAGCAGCACATAATTTCAAGCTGACGTACCCC +
Preference number: 1 (lower is better)
Translates to: TSWEESHEHEVVGKN*HAAKAAHNFKLTYP
Trigger: GGGGTACGTCAGCTTGAAATTATGTGCTGCTTTGGCTGCATGTCAGTTCTTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR TCA 90 bp TTGGTGCTGGCCACAAGACAACCTTCTGTTGTTGCCATTGGAACCTaGAATTCTTTTTCATCTAAGCAAAGGGGTCCTGCCACTCCAACA +
Preference number: 1 (lower is better)
Translates to: LVLATRQPSVVAIGT*NSFSSKQRGPATPT
Trigger: TGTTGGAGTGGCAGGACCCCTTTGCTTAGATGAAAAAGAATTTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTGTGGCCAGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 90 bp TTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGTCCTaGCACATGCATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGC +
Preference number: 1 (lower is better)
Translates to: LDLILYRLLKSNILS*HMHLIAQQITQAES
Trigger: GCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGATGCATGTGGCAGGACAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CCA 90 bp TTGAAAGTGCTTTCTCTGTACCCTTTGAAATCATGTTCATCCCCATaGCATCCCCTGACCTGGACTGGAAACGGATATAAAGGTTGCGTC +
Preference number: 1 (lower is better)
Translates to: LKVLSLYPLKSCSSP*HPLTWTGNGYKGCV
Trigger: GACGCAACCTTTATATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGGATGAACATGATTTCAAAGGGTACAGAGAAAGCACTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR TCA 90 bp TGTTCAGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTAT +
Preference number: 1 (lower is better)
Translates to: CSDLRSLHGKNLRPL*KSQKPSGCLSDHIY
Trigger: ATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCTGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 90 bp TCCACAATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTaGCATGGTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAG +
Preference number: 1 (lower is better)
Translates to: STITMQTQSLRGSPC*HGFLECFSESIFYK
Trigger: CTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTATTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 90 bp TCTTCCACAATAACAATGCAGACACAATCACTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTAC +
Preference number: 1 (lower is better)
Translates to: SSTITMQTQSLRGSP*CHGFLECFSESIFY
Trigger: GTAGAAGATGGACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTATTGTGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 90 bp ATAAATGGTCATGTGAGTCCTAGCATGAATTACAGGTTACTACTATaGCCAGACTTTACAAGCTTCCAGACCTCAGGGCTAGGGTTAATC +
Preference number: 1 (lower is better)
Translates to: INGHVSPSMNYRLLL*PDFTSFQTSGLGLI
Trigger: GATTAACCCTAGCCCTGAGGTCTGGAAGCTTGTAAAGTCTGGTCATAGTAGTAACCTGTAATTCATGCTAGGACTCACATGACCATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 90 bp CATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCAGTGTaGGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATC +
Preference number: 1 (lower is better)
Translates to: HNAQEIGIDVFCSSV*DVPLRFNPVSSPEI
Trigger: GATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTCACACTGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 90 bp TCCTTAACTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTaGGATGATAAATCTGAACTAATCAAACCCTCTAAGAGAGCTCAT +
Preference number: 1 (lower is better)
Translates to: SLTSPPTLTIQKMSS*DDKSELIKPSKRAH
Trigger: ATGAGCTCTCTTAGAGGGTTTGATTAGTTCAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAGTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 90 bp CAAGACTTACCTAGCGTAGGAGCATACTTCGAGAAACACTGGTCATaGAAAAATCTCCACAATGAACATAATGCTCAGGAGATTGGTATT +
Preference number: 1 (lower is better)
Translates to: QDLPSVGAYFEKHWS*KNLHNEHNAQEIGI
Trigger: AATACCAATCTCCTGAGCATTATGTTCATTGTGGAGATTTTTTCATGACCAGTGTTTCTCGAAGTATGCTCCTACGCTAGGTAAGTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTGCTGAGGTAGTAGGTTaGTCCCACCACCCACCGTTC +
Preference number: 2 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSAEVVG*SHHPPF
Trigger: GAACGGTGGGTGGTGGGACCAACCTACTACCTCAGC...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR GCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACTCCACCAAGACCTATTaGTCTGCAGCCTCTATTGGT +
Preference number: 2 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHSTKTY*SAASIG
Trigger: ACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGA...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACCAAACTTGCTCAGGATaGAAAACAAGCGGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHQTCSG*KTSGRD
Trigger: ATCCCTGCCGCTTGTTTTCCATCCTGAGCAAGTTTG...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCCTCCAGCTGTTAGTGTaGGGCTCTTCTTTTGGCCTT +
Preference number: 2 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLLQLLV*GSSFGL
Trigger: AAGGCCAAAAGAAGAGCCTCACACTAACAGCTGGAG...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATCGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACGCTGCCATGGTTTCCTaGAATGTTTTTCAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHAAMVS*NVFQSP
Trigger: TGGACTCTGAAAAACATTCCAGGAAACCATGGCAGC...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACTCACTGCCACTTCCATaGAAAGCTCAGAAAAAGTCA +
Preference number: 2 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHSLPLP*KAQKKS
Trigger: TGACTTTTTCTGAGCTTTTCATGGAAGTGGCAGTGA...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCAGAAAACTCACATCCTaGTGCAAGAGTGCCCATACC +
Preference number: 2 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLRKLTS*CKSAHT
Trigger: GGTATGGGCACTCTTGCATCAGGATGTGAGTTTTCT...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATCACACACACCCCGTATaGTTAGTTAGCTGGCGCGCA +
Preference number: 2 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNHTHPV*LVSWRA
Trigger: TGCGCGCCAGCTAACTAAGCATACGGGGTGTGTGTG...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGTGGAAGACGCACAACTaGGCCACGAGTCATCCCATC +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRWKTHN*ATSHPI
Trigger: GATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR GCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGATCCTGATGCAAGAGTaGCCATACCTCCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRILMQE*PYLPLQ
Trigger: CTGCAGAGGGAGGTATGGGCACTCTTGCATCAGGAT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTTCTGAGGAGTCTGCATaGAAAGAACCTGAGACCTCT +
Preference number: 2 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSSEESA*KEPETS
Trigger: AGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGA...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTCAGTCACCAACCTCCTaGCCACAGGAACTAGGCACA +
Preference number: 2 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFQSPTS*PQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTG...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CAA 90 bp GCCCATGTTCCAGTTCAGAACTGTCGGGCTATTCAGGCTGTCTTCTaGGTGCAAGCTCCTTGGAGGTCTTGTAAATTGATCTTCGACCTG +
Preference number: 2 (lower is better)
Translates to: AHVPVQNCRAIQAVF*VQAPWRSCKLIFDL
Trigger: CAGGTCGAAGATCAATTTACAAGACCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAATAGCCCGACAGTTCTGAACTGGAACATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 2 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTATTTGCCTTCAGAGGTaGGCTGTAGATTACCATCTC +
Preference number: 2 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSICLQR*AVDYHL
Trigger: GAGATGGTAATCTACAGCTCACCTCTGAAGGCAAAT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGAAGTCTTGCTTGTACTTaGCAGTCACCCTCATCTAAG +
Preference number: 2 (lower is better)
Translates to: DARVPIPPSAALKLAQDGSLACT*QSPSSK
Trigger: CTTAGATGAGGGTGACTGTCAAGTACAAGCAAGACT...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCCCACATGCATCTCATTaGTCAGCAGATCACCCAGGC +
Preference number: 2 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFPHASH*SADHPG
Trigger: GCCTGGGTGATCTGCTGAGCAATGAGATGCATGTGG...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATTCCTGTCCTGCCACATaGATCTCATTGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNSCPAT*ISLLSR
Trigger: TCTGCTGAGCAATGAGATGCATGTGGCAGGACAGGA...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGTCCTGTCCTGCCACATaGATCTCATTGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRSCPAT*ISLLSR
Trigger: TCTGCTGAGCAATGAGATGCATGTGGCAGGACAGGA...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATATAGGTGATGGCAAATaGCTCTCTCTGGGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNIGDGK*LSLGQS
Trigger: TGACTGCCCCAGAGAGAGGCATTTGCCATCACCTAT...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCACACACACCCCGTATaGTTAGTTAGCTGGCGCGCA +
Preference number: 2 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVHTHPV*LVSWRA
Trigger: TGCGCGCCAGCTAACTAAGCATACGGGGTGTGTGTG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACTGAGGCAGGAGAACTaGTTGAACCCGGGAAGTGGA +
Preference number: 2 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTLRQEN*LNPGSG
Trigger: TCCACTTCCCGGGTTCAAGCAGTTCTCCTGCCTCAG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR GCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 2 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCAGTCACCAACCTCCTaGCCACAGGAACTAGGCACA +
Preference number: 2 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEQSPTS*PQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTGCTGCCATGGTTTCCTaGAATGTTTTTCAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSAAMVS*NVFQSP
Trigger: TGGACTCTGAAAAACATTCCAGGAAACCATGGCAGC...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCTCTCCATGCTGCCATaGTTTCCTGGAATGTTTTTC +
Preference number: 2 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSLSMLP*FPGMFF
Trigger: GAAAAACATTCCAGGAAACCATGGCAGCATGGAGAG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGACTAGTATCTGGGCCTTaGTTCTTTCTTAGTGCTCAC +
Preference number: 2 (lower is better)
Translates to: DARVPIPPSAALKLAQDGLVSGP*FFLSAH
Trigger: GTGAGCACTAAGAAAGAACCAAGGCCCAGATACTAG...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATGGTGAGGATGGGGAGTaGACAGTGATACATACCCTT +
Preference number: 2 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNGEDGE*TVIHTL
Trigger: AAGGGTATGTATCACTGTCCACTCCCCATCCTCACC...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCACTGTGTTTCTACAATaGTTTCTAAGGTCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLTVFLQ*FLRSQS
Trigger: AGACTGGGACCTTAGAAATCATTGTAGAAACACAGT...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGC +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRTGSES*LSLSLG
Trigger: GCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCCTCCAGCTGTTAGTGTaGGGCTCTTCTTTTGGCCTT +
Preference number: 2 (lower is better)
Translates to: LLCSLPTGFRISQLECCCLQLLV*GSSFGL
Trigger: AAGGCCAAAAGAAGAGCCTCACACTAACAGCTGGAG...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGGGTAAACGGAATAGGTaGTGGCAAATGCCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRGKRNR*WQMPLS
Trigger: AGAGAGAGGCATTTGCCATCACCTATTCCGTTTACC...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACCTAAGGTCCCAGTCTTaGTTGTACTTGACAGTCACC +
Preference number: 2 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHLRSQS*LYLTVT
Trigger: GGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAG...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCCTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFLRGSP*CHGFLE
Trigger: TTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAG...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCCGGGAAGTGGAGGTTaGAGTGAGCCAGGATCGTGC +
Preference number: 2 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDPGSGG*SEPGSC
Trigger: GCACGATCCTGGCTCACTGCAACCTCCACTTCCCGG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCCAGTCACCAACCTCCTaGCCACAGGAACTAGGCACA +
Preference number: 2 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGQSPTS*PQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTG...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATCAAACTTGCTCAGGATaGAAAACAAGCGGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNQTCSG*KTSGRD
Trigger: ATCCCTGCCGCTTGTTTTCCATCCTGAGCAAGTTTG...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGGTATGCTTAGTTAGCTaGCGCGCACACACATACACA +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRVCLVS*RAHTYT
Trigger: TGTGTATGTGTGTGCGCGCCAGCTAACTAAGCATAC...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGAAAATGTAGCTCTGTTTaGGGTATCTGTTTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: DARVPIPPSAALKLAQDGKCSSV*GICFSH
Trigger: GTGGCTGAAACAGATACCCCAAACAGAGCTACATTT...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGATTAGCTCTTACTTCTTaGAGTTCTACATCCCAGACT +
Preference number: 2 (lower is better)
Translates to: DARVPIPPSAALKLAQDGLALTS*SSTSQT
Trigger: AGTCTGGGATGTAGAACTTCAAGAAGTAAGAGCTAA...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGAACTGTGTTTCTACAATaGTTTCTAAGGTCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: DARVPIPPSAALKLAQDGTVFLQ*FLRSQS
Trigger: AGACTGGGACCTTAGAAATCATTGTAGAAACACAGT...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGC +
Preference number: 2 (lower is better)
Translates to: LLCSLPTGFRISQLECCCTGSES*LSLSLG
Trigger: GCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGT...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCTCCTTCACTGGCTCTaGAAGCTGACTTTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLLLHWL*KLTFPF
Trigger: GAAAGGGAAAGTCAGCTTTCAGAGCCAGTGAAGGAG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCGGTAAACGGAATAGGTaGTGGCAAATGCCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFGKRNR*WQMPLS
Trigger: AGAGAGAGGCATTTGCCATCACCTATTCCGTTTACC...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCCCTTACTTCATCCTGTaGGTTGGAACTGAGGGCAAA +
Preference number: 2 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFPYFIL*VGTEGK
Trigger: TTTGCCCTCAGTTCCAACTCACAGGATGAAGTAAGG...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp AACCCAATGCCCATGTTCCAGTTCAGAACTGTCGGGCTATTCAGGCTGTCTTCTATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTA +
Preference number: 2 (lower is better)
Translates to: NPMPMFQFRTVGLFRLSSIILTL*VTGFGL
Trigger: TAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGAT...AGAAGACAGCCTGAATAGCCCGACAGTTCTGAACTGGAACATGGGCATTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTCCTGTCCTGCCACATaGATCTCATTGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLESCPAT*ISLLSR
Trigger: TCTGCTGAGCAATGAGATGCATGTGGCAGGACAGGA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATTCAAACATCCTGTCCTaGCACATGCATCTCATTGCT +
Preference number: 2 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNSNILS*HMHLIA
Trigger: AGCAATGAGATGCATGTGGCAGGACAGGATGTTTGA...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGGCTGCCATGGTTTCCTaGAATGTTTTTCAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRAAMVS*NVFQSP
Trigger: TGGACTCTGAAAAACATTCCAGGAAACCATGGCAGC...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCTAGTATCTGGGCCTTaGTTCTTTCTTAGTGCTCAC +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRLVSGP*FFLSAH
Trigger: GTGAGCACTAAGAAAGAACCAAGGCCCAGATACTAG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 2 (lower is better)
Translates to: LLCSLPTGFRISQLECCCKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 2 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 2 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGC +
Preference number: 2 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVTGSES*LSLSLG
Trigger: GCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGATCCAAGAGCAACACTTaGAGCATTAGATGTAATACA +
Preference number: 2 (lower is better)
Translates to: DARVPIPPSAALKLAQDGSKSNT*SIRCNT
Trigger: TGTATTACATCTAATGCTTCAAGTGTTGCTCTTGGA...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGTCACTGCCACTTCCATaGAAAGCTCAGAAAAAGTCA +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRSLPLP*KAQKKS
Trigger: TGACTTTTTCTGAGCTTTTCATGGAAGTGGCAGTGA...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGGGTAAACGGAATAGGTaGTGGCAAATGCCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEGKRNR*WQMPLS
Trigger: AGAGAGAGGCATTTGCCATCACCTATTCCGTTTACC...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 2 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTTCTGAACAAATAGCCTaGGGAGATAAATACAGTGAT +
Preference number: 2 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSSEQIA*GDKYSD
Trigger: ATCACTGTATTTATCTCCGCAGGCTATTTGTTCAGA...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCTAAGGTCCCAGTCTTaGTTGTACTTGACAGTCACC +
Preference number: 2 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVLRSQS*LYLTVT
Trigger: GGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCAAACTTGCTCAGGATaGAAAACAAGCGGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVQTCSG*KTSGRD
Trigger: ATCCCTGCCGCTTGTTTTCCATCCTGAGCAAGTTTG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp TCAAATGCCTCCTTTATCACTGCGAACCCTTCAGATGTTTCGAGCCAGGCTTTCAAAACTCGGGCAAAATaGCTGAGCTGCCAAATTGGA +
Preference number: 2 (lower is better)
Translates to: SNASFITANPSDVSSQAFKTRAK*LSCQIG
Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTT...GAAAGCCTGGCTCGAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCTTTTGCTCTTCAGTGTaGGATGTGCCCCTTAGATTT +
Preference number: 2 (lower is better)
Translates to: LLCSLPTGFRISQLECCCFCSSV*DVPLRF
Trigger: AAATCTAAGGGGCACATCTCACACTGAAGAGCAAAA...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCAAAGAAGATGTACTTaGCAGCCAGAAGGAGAGCTA +
Preference number: 2 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVQRRCT*QPEGEL
Trigger: TAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGATACTCGTGAAGTTTTaGAAGTGCTTTCTCTGTACC +
Preference number: 2 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRILVKF*KCFLCT
Trigger: GGTACAGAGAAAGCACTTTCAAAACTTCACGAGTAT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 2 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR GCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGCTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: EMCPLDLILYRLLKSNILLRGSP*CHGFLE
Trigger: TTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAG...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCCACAGCTTAAATGCTTaGAATGGCTGTTTGGTTGTG +
Preference number: 2 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSHSLNA*NGCLVV
Trigger: CACAACCAAACAGCCATTGCAAGCATTTAAGCTGTG...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCCTCACACAGCTTAAATaGTTGCAATGGCTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: LLCSLPTGFRISQLECCCLTQLK*LQWLFG
Trigger: ACCAAACAGCCATTGCAAGCATTTAAGCTGTGTGAG...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCCTTCAGTGTGAGATGTaGCCCTTAGATTTAATCCTG +
Preference number: 2 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFLQCEM*PLDLIL
Trigger: CAGGATTAAATCTAAGGGGCACATCTCACACTGAAG...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGTGCAGCCTCTATTGGTaGTGGCCACAAGACAACCTT +
Preference number: 2 (lower is better)
Translates to: EMCPLDLILYRLLKSNILCSLYW*WPQDNL
Trigger: AAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCA...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATGAACATTATCTTCTCTaGCCCAGGCTAGAGTATTTT +
Preference number: 2 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNEHYLL*PRLEYF
Trigger: AAAATACTCTAGCCTGGGCCAGAGAAGATAATGTTC...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCTCTCCATGCTGCCATaGTTTCCTGGAATGTTTTTC +
Preference number: 2 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLELSMLP*FPGMFF
Trigger: GAAAAACATTCCAGGAAACCATGGCAGCATGGAGAG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCTTAAATGCTTGCAATaGCTGTTTGGTTGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLELKCLQ*LFGCGC
Trigger: GCAGCCACAACCAAACAGCCATTGCAAGCATTTAAG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CAA 90 bp CCTATGCTCCCAGCCATGGCAGAGCCCACTAAATTCTTGTTAATGTaGACCTCAATCATAGCCTCTGTGGTAGTCTTTAATACTTCTCTG +
Preference number: 2 (lower is better)
Translates to: PMLPAMAEPTKFLLM*TSIIASVVVFNTSL
Trigger: CAGAGAAGTATTAAAGACTACCACAGAGGCTATGATTGAGGTCAACATTAACAAGAATTTAGTGGGCTCTGCCATGGCTGGGAGCATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 2 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 2 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: EMCPLDLILYRLLKSNILECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCTCACTGCCACTTCCATaGAAAGCTCAGAAAAAGTCA +
Preference number: 2 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACSLPLP*KAQKKS
Trigger: TGACTTTTTCTGAGCTTTTCATGGAAGTGGCAGTGA...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp GATGATCTCAGCATCACTAAGGAATTTTGCACCTTTCTCTGCATTCCCAAGTATGTAGTTGGCAAGAACTaGCATGCAGCCAAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: DDLSITKEFCTFLCIPKYVVGKN*HAAKAA
Trigger: TGCTGCTTTGGCTGCATGTCAGTTCTTGCCAACTAC...ATACTTGGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGATGCTGAGATCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 2 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATTCTGAACAAATAGCCTaGGGAGATAAATACAGTGAT +
Preference number: 2 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNSEQIA*GDKYSD
Trigger: ATCACTGTATTTATCTCCGCAGGCTATTTGTTCAGA...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACCAACATATTTTTCACTaGCACTTCCATGAAAAGCTC +
Preference number: 2 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHQHIFH*HFHEKL
Trigger: GAGCTTTTCATGGAAGTGGCAGTGAAAAATATGTTG...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCTCACACAGCTTAAATaGTTGCAATGGCTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLELTQLK*LQWLFG
Trigger: ACCAAACAGCCATTGCAAGCATTTAAGCTGTGTGAG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCATTAAAGCCATCTTTTaGATTCAGCCTCCTAACTCC +
Preference number: 2 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFIKAIF*IQPPNS
Trigger: GGAGTTAGGAGGCTGAATGCAAAAGATGGCTTTAAT...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 2 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 2 (lower is better)
Translates to: LALPLSLSKRCLVEMINLNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LALPLSLSKRCLVEMINLNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTCCAAGAGCAACACTTaGAGCATTAGATGTAATACA +
Preference number: 2 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFSKSNT*SIRCNT
Trigger: TGTATTACATCTAATGCTTCAAGTGTTGCTCTTGGA...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGCTGGGAAGAAAGTCATaGACACGAAGTAGTTGGCAA +
Preference number: 2 (lower is better)
Translates to: EMCPLDLILYRLLKSNILLGRKS*TRSSWQ
Trigger: TTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAG...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: NQVAVSVITSIHPPQDNASFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCTGAACAAATAGCCTaGGGAGATAAATACAGTGAT +
Preference number: 2 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSSEQIA*GDKYSD
Trigger: ATCACTGTATTTATCTCCGCAGGCTATTTGTTCAGA...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCCTAAGGTCCCAGTCTTaGTTGTACTTGACAGTCACC +
Preference number: 2 (lower is better)
Translates to: FLECFSESIFYKRHHQLSLRSQS*LYLTVT
Trigger: GGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAG...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTACTTTTATGCTCCCTaGCAACTGGCTTCAGAATTA +
Preference number: 2 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEYFYAP*QLASEL
Trigger: TAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAGTA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCAAACTTTGCTAATGTaGTTGCTCTGGAAAGGTCAA +
Preference number: 2 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVQTLLM*LLWKGQ
Trigger: TTGACCTTTCCAGAGCAAGCACATTAGCAAAGTTTG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR GCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCACAAGACCTATTGCTCTaGAGCCTCTATTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSQDLLL*SLYWCW
Trigger: CCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTG...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGAACATTATCTTCTCTaGCCCAGGCTAGAGTATTTT +
Preference number: 2 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTEHYLL*PRLEYF
Trigger: AAAATACTCTAGCCTGGGCCAGAGAAGATAATGTTC...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCAAGCCAGGGTTTCCTaGACAACATTAAAGAACATT +
Preference number: 2 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLQARVS*TTLKNI
Trigger: AATGTTCTTTAATGTTGTCCAGGAAACCCTGGCTTG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGCTCTCCATGCTGCCATaGTTTCCTGGAATGTTTTTC +
Preference number: 2 (lower is better)
Translates to: EMCPLDLILYRLLKSNILLSMLP*FPGMFF
Trigger: GAAAAACATTCCAGGAAACCATGGCAGCATGGAGAG...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CAA 90 bp CATTTCTGGTTATTTCTGACCAGCATAGGTTCACGTCTACAACAATaGTCTGGGACTTTCTTTTGTGTCACTACAGGAGATGTGATAGGG +
Preference number: 2 (lower is better)
Translates to: HFWLFLTSIGSRLQQ*SGTFFCVTTGDVIG
Trigger: CCCTATCACATCTCCTGTAGTGACACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGAACCTATGCTGGTCAGAAATAACCAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 2 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCAACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGC +
Preference number: 2 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSTGSES*LSLSLG
Trigger: GCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGT...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: LSERAKNQVAVSVITSIHSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCTCTGAACAAATAGCCTaGGGAGATAAATACAGTGAT +
Preference number: 2 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVSEQIA*GDKYSD
Trigger: ATCACTGTATTTATCTCCGCAGGCTATTTGTTCAGA...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCATCTGAGGAGTCTGCATaGAAAGAACCTGAGACCTCT +
Preference number: 2 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSSEESA*KEPETS
Trigger: AGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGA...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp GATGATCTCAGCATCACTAAGGAATTTTGCACCTTTCTCTGCATTCCCAAGTATCAAATTAAATGGGCATaGTGGCAGGTGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: DDLSITKEFCTFLCIPKYQIKWA*WQVPVI
Trigger: GATTACAGGCACCTGCCACCATGCCCATTTAATTTG...ATACTTGGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGATGCTGAGATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 2 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGACTGTGTTTCTACAATaGTTTCTAAGGTCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LALPLSLSKRCLVEMINLTVFLQ*FLRSQS
Trigger: AGACTGGGACCTTAGAAATCATTGTAGAAACACAGT...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGTACAGGTTACTACTATaGCCAGACTTTACAAGCTTC +
Preference number: 2 (lower is better)
Translates to: LALPLSLSKRCLVEMINLYRLLL*PDFTSF
Trigger: GAAGCTTGTAAAGTCTGGTCATAGTAGTAACCTGTA...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGATCACTAAGGAATTTTaGACCTTTCTCTGCATTCCC +
Preference number: 2 (lower is better)
Translates to: EMCPLDLILYRLLKSNILITKEF*TFLCIP
Trigger: GGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGAT...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR CAA 90 bp CTGCCATCTTCTCTCGGCTTCCAGTGTAGAGGTTACCCATTATTTTaGCTAACTGGCAAAGTAATTAATAAATTCAAGACTTACCTAGCG +
Preference number: 2 (lower is better)
Translates to: LPSSLGFQCRGYPLF*LTGKVINKFKTYLA
Trigger: CGCTAGGTAAGTCTTGAATTTATTAATTACTTTGCCAGTTAGCAAAAATAATGGGTAACCTCTACACTGGAAGCCGAGAGAAGATGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR TCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 2 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCAAATACACAAATTAAATaGGCATGGTGGCAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSNTQIK*AWWQVP
Trigger: AGGCACCTGCCACCATGCCCATTTAATTTGTGTATT...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTTAGCTCTTACTTCTTaGAGTTCTACATCCCAGACT +
Preference number: 2 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSLALTS*SSTSQT
Trigger: AGTCTGGGATGTAGAACTTCAAGAAGTAAGAGCTAA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp GATGATCTCAGCATCACTAAGGAATTTTGCACCTTTCTCTGCATTCCCAAGTATCAACATATTTTTCACTaGCACTTCCATGAAAAGCTC +
Preference number: 2 (lower is better)
Translates to: DDLSITKEFCTFLCIPKYQHIFH*HFHEKL
Trigger: GAGCTTTTCATGGAAGTGGCAGTGAAAAATATGTTG...ATACTTGGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGATGCTGAGATCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR CAA 90 bp TTTAACACATTATTCTGTAGTTTGGGAATAAGAGTGTTTCTTCCCTaGAAGAAAACAGGTCCCCTTCTGAAGAATAATGCTGATTACCCC +
Preference number: 2 (lower is better)
Translates to: FNTLFCSLGIRVFLP*KKTGPLLKNNADYP
Trigger: GGGGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTCTTATTCCCAAACTACAGAATAATGTGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CAA 90 bp AATGAGAGTGTAGATTCTGTCTCTGTTTGTTCAAAGAAGATGTACTaGACAGCCAGAAGGAGAGCTAAACTTAGGGTAATAACTTGTTCA +
Preference number: 2 (lower is better)
Translates to: NESVDSVSVCSKKMY*TARRRAKLRVITCS
Trigger: TGAACAAGTTATTACCCTAAGTTTAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTGAACAAACAGAGACAGAATCTACACTCTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR TCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCATCCAAGAGCAACACTTaGAGCATTAGATGTAATACA +
Preference number: 2 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSSKSNT*SIRCNT
Trigger: TGTATTACATCTAATGCTTCAAGTGTTGCTCTTGGA...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR GCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCACAACATATTTTTCACTaGCACTTCCATGAAAAGCTC +
Preference number: 2 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSQHIFH*HFHEKL
Trigger: GAGCTTTTCATGGAAGTGGCAGTGAAAAATATGTTG...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp TGGAAGACGCACAACTGGGCCACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGCACCTCCACCAAGACC +
Preference number: 3 (lower is better)
Translates to: WKTHNWATSHPI*KDSAAGTSTKT
Trigger: GGTCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR CCA 72 bp TTCTGCAGAGTCACAAGCACGTGGAAGACGCACAACTaGGCCACGAGTCATCCCATCTGCAAGGACTCGGCT +
Preference number: 3 (lower is better)
Translates to: FCRVTSTWKTHN*ATSHPICKDSA
Trigger: AGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR CCA 72 bp GAGCCAGGCTTTCACTTCTGCAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCCACGAGTCATCCCATC +
Preference number: 3 (lower is better)
Translates to: EPGFHFCRVTST*KTHNWATSHPI
Trigger: GATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR CCA 72 bp GATCCTTCACTCTCTTCTGTCCAGCCTGTTCCACCCTaGAGAGGGCTGAGCATACAGGTGACCACAGGTCAT +
Preference number: 3 (lower is better)
Translates to: DPSLSSVQPVPP*RGLSIQVTTGH
Trigger: ATGACCTGTGGTCACCTGTATGCTCAGCCCTCTCCAGGGTGGAACAGGCTGGACAGAAGAGAGTGAAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 72 bp GGCCATTCACGTGGCTCCTTCACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGCTCGGCAAGCAAGCCA +
Preference number: 3 (lower is better)
Translates to: GHSRGSFTGSES*LSLSLGSASKP
Trigger: TGGCTTGCTTGCCGAGCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGTGAAGGAGCCACGTGAATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp AAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTaGTCAGGATGGAAAACAAGCGGCAGGGATAGGGGT +
Preference number: 3 (lower is better)
Translates to: KSAHTSLCSSQT*SGWKTSGRDRG
Trigger: ACCCCTATCCCTGCCGCTTGTTTTCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp TCCACAGGCAATGTAGATGGCGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCCTATGCTCCCAGCCAT +
Preference number: 3 (lower is better)
Translates to: STGNVDGGDNVC*MGVVASYAPSH
Trigger: ATGGCTGGGAGCATAGGAGGCTACAACGCCCATGCAGCAAACATTGTCACCGCCATCTACATTGCCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 72 bp CCAGCCATTACGGTCCCACACACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGATTATCTTTGCATGCT +
Preference number: 3 (lower is better)
Translates to: PAITVPHTIRAS*RAFSPGLSLHA
Trigger: AGCATGCAAAGATAATCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGTGTGTGGGACCGTAATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR CCA 72 bp GGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTaGGTAAATGCACACTCATTTGAGAGCCGCAGTATT +
Preference number: 3 (lower is better)
Translates to: GAGPSSLFKQVL*VNAHSFESRSI
Trigger: AATACTGCGGCTCTCAAATGAGTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CCA 72 bp CGCGCACACACATACACACCTTGTATGCTTAGCAGCTaGCACAAGGCCCTCCTACTTTTATGCTCCCTGCCA +
Preference number: 3 (lower is better)
Translates to: RAHTYTPCMLSS*HKALLLLCSLP
Trigger: TGGCAGGGAGCATAAAAGTAGGAGGGCCTTGTGCCAGCTGCTAAGCATACAAGGTGTGTATGTGTGTGCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 72 bp GTTCTAGGGCCATTCACGTGGCTCCTTCACTGGCTCTaGAAGCTGACTTTCCCTTTCATTAGGCTCGGCAAG +
Preference number: 3 (lower is better)
Translates to: VLGPFTWLLHWL*KLTFPFIRLGK
Trigger: CTTGCCGAGCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGTGAAGGAGCCACGTGAATGGCCCTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 72 bp CTAAGAGCGTTCGTGGGTCCATCAAAGAGCCCTGTGTaGATGTTTCAGTCACCAACCTCCTGGCCACAGGAA +
Preference number: 3 (lower is better)
Translates to: LRAFVGPSKSPV*MFQSPTSWPQE
Trigger: TTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGGCTCTTTGATGGACCCACGAACGCTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp TCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATaGTGTTGCCTGGGTCTAATCCTGCTCCAGCACTAC +
Preference number: 3 (lower is better)
Translates to: SLPTGFRISQLE*CCLGLILLQHY
Trigger: GTAGTGCTGGAGCAGGATTAGACCCAGGCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp GCAGCTGGCACAAGGCCCTCCTACTTTTATGCTCCCTaGCAACTGGCTTCAGAATTAGCCAACTGGAATGCT +
Preference number: 3 (lower is better)
Translates to: AAGTRPSYFYAP*QLASELANWNA
Trigger: AGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAGTAGGAGGGCCTTGTGCCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp GAACCCTTCAGATGTTTCGAGCCAGGCTTTCACTTCTaGAGAGTCACAAGCACGTGGAAGACGCACAACTGG +
Preference number: 3 (lower is better)
Translates to: EPFRCFEPGFHF*RVTSTWKTHNW
Trigger: CCAGTTGTGCGTCTTCCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGGCTCGAAACATCTGAAGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CAA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 3 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLSKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCCCCCTATTTGGCCCTTaGCAGCAGAGTGCAGGGAAC +
Preference number: 3 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFPLFGP*QQSAGN
Trigger: GTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGG...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCAGGCAGGAGAACTGCTaGAACCCGGGAAGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSRQENC*NPGSGG
Trigger: ACCTCCACTTCCCGGGTTCAAGCAGTTCTCCTGCCT...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CAA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCGCTTGCAATGGCTGTTaGGTTGTGGCTGCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSACNGC*VVAAPL
Trigger: AAGAGGGGCAGCCACAACCAAACAGCCATTGCAAGC...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCAGAAGACCTTCAGTGTaGTTCTGGGACAGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFRRPSV*FWDRRG
Trigger: CCCCCTCCTGTCCCAGAACAACACTGAAGGTCTTCT...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACCTTGGTTCAATTCTCTaGGACACATTTTCATCCAGT +
Preference number: 3 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHLGSIL*DTFSSS
Trigger: ACTGGATGAAAATGTGTCCAAGAGAATTGAACCAAG...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 3 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSTSLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 72 bp TCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTaGAATGGCTGTTTGGTTGTGGCTGCCCCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: SPLQFSSHSLNA*NGCLVVAAPLL
Trigger: GAGAAGAGGGGCAGCCACAACCAAACAGCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp ACAAACAGGAGGGTAAACGGAATAGGTGATGGCAAATaGCTCTCTCTGGGGCAGTCACTCCACAGGTTGAAG +
Preference number: 3 (lower is better)
Translates to: TNRRVNGIGDGK*LSLGQSLHRLK
Trigger: CTTCAACCTGTGGAGTGACTGCCCCAGAGAGAGGCATTTGCCATCACCTATTCCGTTTACCCTCCTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp ATGCTTAGCAGCTGGCACAAGGCCCTCCTACTTTTATaGTCCCTGCCAACTGGCTTCAGAATTAGCCAACTG +
Preference number: 3 (lower is better)
Translates to: MLSSWHKALLLL*SLPTGFRISQL
Trigger: CAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAGTAGGAGGGCCTTGTGCCAGCTGCTAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp TCTTCTTCTTCTAAAACTCGGGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCGCGGCTTTCCCGAGAA +
Preference number: 3 (lower is better)
Translates to: SSSSKTRAKWLS*QIGRPSRLSRE
Trigger: TTCTCGGGAAAGCCGCGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTTAGAAGAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CAA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCTGTGAGGCTCTTCTTTaGGCCTTAGGGAGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: LLCSLPTGFRISQLECCCCEALL*ALGSSC
Trigger: ACAGCTGCTCCCTAAGGCCAAAAGAAGAGCCTCACA...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCAGAAGACCTTCAGTGTaGTTCTGGGACAGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVRRPSV*FWDRRG
Trigger: CCCCCTCCTGTCCCAGAACAACACTGAAGGTCTTCT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCCTTTCTCTGTACCCTTaGAAATCATGTTCATCCCCA +
Preference number: 3 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLLSLYP*KSCSSP
Trigger: TGGGGATGAACATGATTTCAAAGGGTACAGAGAAAG...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 72 bp CCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTaGCTGGGTCTAATCCTGCTCCAGCACTACAATCCT +
Preference number: 3 (lower is better)
Translates to: PTGFRISQLECC*LGLILLQHYNP
Trigger: AGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CCA 72 bp CACCAAGACCTATTGCTCTGCAGCCTCTATTGGTGCTaGCCACAAGACAACCTTCTGTTGTTGCCATTGGAA +
Preference number: 3 (lower is better)
Translates to: HQDLLLCSLYWC*PQDNLLLLPLE
Trigger: TTCCAATGGCAACAACAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CAA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCTCCACCAAGACCTATaGCTCTGCAGCCTCTATTGG +
Preference number: 3 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVLHQDL*LCSLYW
Trigger: CCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGAG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR TCA 72 bp CTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGAT +
Preference number: 3 (lower is better)
Translates to: LRSLHGKNLRPL*KSQKPSGCLSD
Trigger: ATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 72 bp TTTGACAAGATGTCCTGCTGCCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTACGGTCCCACACACAAT +
Preference number: 3 (lower is better)
Translates to: FDKMSCCQCCHK*QFPSHYGPTHN
Trigger: ATTGTGTGTGGGACCGTAATGGCTGGGGAATTGTCACTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 72 bp AAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATaGTTGCAATGGCTGTTTGGTTGTGGCTGCCCCTCT +
Preference number: 3 (lower is better)
Translates to: KFPSPIQLTQLK*LQWLFGCGCPS
Trigger: AGAGGGGCAGCCACAACCAAACAGCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACTTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 3 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 3 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACSKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACACACAGCTTAAATGCTaGCAATGGCTGTTTGGTTGT +
Preference number: 3 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHTQLKC*QWLFGC
Trigger: ACAACCAAACAGCCATTGCAAGCATTTAAGCTGTGT...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCTGCAGCTCTCAAACTaGCTCAGGATGGAAAACAAG +
Preference number: 3 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVLQLSN*LRMENK
Trigger: CTTGTTTTCCATCCTGAGCAAGTTTGAGAGCTGCAG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCGTCTGGGACTTTCTTTaGTGTCACTACAGGAGATGT +
Preference number: 3 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFVWDFL*CHYRRC
Trigger: ACATCTCCTGTAGTGACACAAAAGAAAGTCCCAGAC...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR TCA 72 bp AAACCATTCATTCAAGCCCCACCAGGCACCTCATACTaGAATTCCAACCTATTAGTGCAGCAGCAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: KPFIQAPPGTSY*NSNLLVQQQQQ
Trigger: TTGCTGCTGCTGCTGCACTAATAGGTTGGAATTTCAGTATGAGGTGCCTGGTGGGGCTTGAATGAATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp AAATCTGCTAGTGCTGTCAAATGCCTCCTTTATCACTaGGAACCCTTCAGATGTTTCGAGCCAGGCTTTCAC +
Preference number: 3 (lower is better)
Translates to: KSASAVKCLLYH*EPFRCFEPGFH
Trigger: GTGAAAGCCTGGCTCGAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCATTTGACAGCACTAGCAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CAA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCTTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 3 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCACTTTGCTAATGTGCTaGCTCTGGAAAGGTCAATCA +
Preference number: 3 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFTLLMC*LWKGQS
Trigger: TGATTGACCTTTCCAGAGCAAGCACATTAGCAAAGT...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 72 bp ACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTaGCATGGTTTCCTGGAATGTTTTTCAGAGTCCATC +
Preference number: 3 (lower is better)
Translates to: TMQTQSLRGSPC*HGFLECFSESI
Trigger: GATGGACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp CATCCCCTGACCTGGACTGGAAACGGATATAAAGGTTaGGTCCAGCTATACTTGTATGAAGTTTCTGTAGAC +
Preference number: 3 (lower is better)
Translates to: HPLTWTGNGYKG*VQLYLYEVSVD
Trigger: GTCTACAGAAACTTCATACAAGTATAGCTGGACGCAACCTTTATATCCGTTTCCAGTCCAGGTCAGGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CAA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTAGGTCCCAGTCTTGCTaGTACTTGACAGTCACCCTC +
Preference number: 3 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFRSQSC*YLTVTL
Trigger: GAGGGTGACTGTCAAGTACAAGCAAGACTGGGACCT...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 3 (lower is better)
Translates to: EMCPLDLILYRLLKSNILSKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 72 bp CATGTGAGTCCTAGCATGAATTACAGGTTACTACTATaGCCAGACTTTACAAGCTTCCAGACCTCAGGGCTA +
Preference number: 3 (lower is better)
Translates to: HVSPSMNYRLLL*PDFTSFQTSGL
Trigger: TAGCCCTGAGGTCTGGAAGCTTGTAAAGTCTGGTCATAGTAGTAACCTGTAATTCATGCTAGGACTCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR GCA 72 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCC +
Preference number: 3 (lower is better)
Translates to: ITMQTQSLRGSP*CHGFLECFSES
Trigger: GGACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCATAATGCTCAGGAGATaGGTATTGATGTGTTTTGCT +
Preference number: 3 (lower is better)
Translates to: LLCSLPTGFRISQLECCCIMLRR*VLMCFA
Trigger: AGCAAAACACATCAATACCAATCTCCTGAGCATTAT...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACATCACGTCTACAACAATaGTCTGGGACTTTCTTTTGT +
Preference number: 3 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTSRLQQ*SGTFFC
Trigger: ACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGA...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCAATACTCGTGAAGTTTaGAAAGTGCTTTCTCTGTAC +
Preference number: 3 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFNTREV*KVLSLY
Trigger: GTACAGAGAAAGCACTTTCAAAACTTCACGAGTATT...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR TCA 72 bp CCTAGCGTAGGAGCATACTTCGAGAAACACTGGTCATaGAAAAATCTCCACAATGAACATAATGCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: PSVGAYFEKHWS*KNLHNEHNAQE
Trigger: CTCCTGAGCATTATGTTCATTGTGGAGATTTTTTCATGACCAGTGTTTCTCGAAGTATGCTCCTACGCTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATTTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 3 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR-3UTR CAA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 3 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFSKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 72 bp CAGGAGATTGGTATTGATGTGTTTTGCTCTTCAGTGTaGGATGTGCCCCTTAGATTTAATCCTGTATCGTCT +
Preference number: 3 (lower is better)
Translates to: QEIGIDVFCSSV*DVPLRFNPVSS
Trigger: AGACGATACAGGATTAAATCTAAGGGGCACATCTCACACTGAAGAGCAAAACACATCAATACCAATCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 72 bp CAATATTTTCCCTTACTTCATCCTGTGAGTTGGAACTaGGGGCAAACTTTGCTAATGTGCTTGCTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: QYFPLLHPVSWN*GQTLLMCLLWK
Trigger: TTTCCAGAGCAAGCACATTAGCAAAGTTTGCCCTCAGTTCCAACTCACAGGATGAAGTAAGGGAAAATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR-3UTR CAA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 3 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 72 bp AGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTaGGATGATAAATCTGAACTAATCAAACCCTCTAAG +
Preference number: 3 (lower is better)
Translates to: SPPTLTIQKMSS*DDKSELIKPSK
Trigger: CTTAGAGGGTTTGATTAGTTCAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR TCA 72 bp AGAACCAAGCCTAGAGACATAATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTATTTTCTTCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: RTKPRDIIILTL*VTGFGLFSSSS
Trigger: AGAAGAAGAAGAAAATAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGATTATGTCTCTAGGCTTGGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR GCA 72 bp TTGGTATTGATGTGTTTTGCTCTTCAGTGTGAGATGTaGCCCTTAGATTTAATCCTGTATCGTCTCCTGAAA +
Preference number: 3 (lower is better)
Translates to: LVLMCFALQCEM*PLDLILYRLLK
Trigger: TTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTCACACTGAAGAGCAAAACACATCAATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACCGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCCCCATGGCATCCCCTaGCCTGGACTGGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSPHGIP*PGLETD
Trigger: ATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLTSHPI*KDSAAG
Trigger: GCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGT...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCCGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCGCTGAGCTGCCAAATTaGACGACCCTCGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLAELPN*TTLAAF
Trigger: GAAAGCCGCGAGGGTCGTCCAATTTGGCAGCTCAGC...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCGCTGAGGTAGTAGGTTaGTCCCACCACCCACCGTTC +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLAEVVG*SHHPPF
Trigger: GAACGGTGGGTGGTGGGACCAACCTACTACCTCAGC...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTTCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSSLSPL*LPRDGR
Trigger: CCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGA...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACTGCAGCCTCTATTGGTaGTGGCCACAAGACAACCTT +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHCSLYW*WPQDNL
Trigger: AAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCA...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACCAAGACCTATTGCTCTaGAGCCTCTATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHQDLLL*SLYWCW
Trigger: CCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTG...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGAACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: DARVPIPPSAALKLAQDGTSHPI*KDSAAG
Trigger: GCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGT...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACGGTGAGGATGGGGAGTaGACAGTGATACATACCCTT +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHGEDGE*TVIHTL
Trigger: AAGGGTATGTATCACTGTCCACTCCCCATCCTCACC...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACCCTTACTTCATCCTGTaGGTTGGAACTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHPYFIL*VGTEGK
Trigger: TTTGCCCTCAGTTCCAACTCACAGGATGAAGTAAGG...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACGATACACCACGCTCATaGGTTTCCATCAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHDTPRS*VSIRVS
Trigger: GGAAACTCTGATGGAAACTCATGAGCGTGGTGTATC...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACGGGTTACTCCGGCACTaGTGCCGGCCGCCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNGLLRH*CRPPLG
Trigger: GCCGAGCGGCGGCCGGCATCAGTGCCGGAGTAACCC...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR GCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCGCCCATACCTCCCTCTaGAGCTCTCAAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLAHTSL*SSQTCS
Trigger: TGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGC...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSRVTST*KTHNWA
Trigger: GGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCAGTCACCAACCTCCTaGCCACAGGAACTAGGCACA +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSQSPTS*PQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACCACATAATTTCAAGCTaGCGTACCCCTGACATGGTA +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHHIISS*RTPDMV
Trigger: TACCATGTCAGGGGTACGTCAGCTTGAAATTATGTG...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCCAATGTAGATGGCGGTaGCAATGTTTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLQCRWR*QCLLHG
Trigger: CCCATGCAGCAAACATTGTCACCGCCATCTACATTG...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTTGCAAACAGGCTTGCTaGGGTAGTAGGTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSCKQAC*GSRLVP
Trigger: TGGGACCAACCTACTACCTCAGCAAGCCTGTTTGCA...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287936.9
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACCCAGGCACCTCATACTaGAATTCCAACCTATTAGTG +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHPGTSY*NSNLLV
Trigger: CACTAATAGGTTGGAATTTCAGTATGAGGTGCCTGG...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAACTGAACAGGGACGATaGACGCAGCTACGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTTEQGR*TQLRPA
Trigger: CGCGGGGCGTAGCTGCGTTCATCGTCCCTGTTCAGT...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR GCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACTGTTCATGGACATCATaGAGATGGTCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHCSWTS*RWSVSL
Trigger: CAGTGACACTGACCATCTGCATGATGTCCATGAACA...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCCAAGACCTATTGCTCTaGAGCCTCTATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLQDLLL*SLYWCW
Trigger: CCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTG...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFLQGLG*WHLHQD
Trigger: GTCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAG...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRTSHPI*KDSAAG
Trigger: GCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCCAATGCCCATGTTCCAGTTCAGAACTGTCGGGCTATTCAGGCTGTCTTCTCGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: NPMPMFQFRTVGLFRLSSRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...AGAAGACAGCCTGAATAGCCCGACAGTTCTGAACTGGAACATGGGCATTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCCACATGCATCTCATTaGTCAGCAGATCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSPHASH*SADHPG
Trigger: GCCTGGGTGATCTGCTGAGCAATGAGATGCATGTGG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTATCCTGATGCAAGAGTaGCCATACCTCCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSILMQE*PYLPLQ
Trigger: CTGCAGAGGGAGGTATGGGCACTCTTGCATCAGGAT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCGGCCGCCGCTCGGCCTaGCGGGCCTCAAGGACATTC +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSGRRSA*RASRTF
Trigger: GAATGTCCTTGAGGCCCGGCAGGCCGAGCGGCGGCC...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACGCCGACGCTCAGCCTaGCTCCAGTTAACGCAGTCG +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKRRRSA*LQLTQS
Trigger: CGACTGCGTTAACTGGAGCCAGGCTGAGCGTCGGCG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCTCTGCAGCCTCTATTaGTGCTGGCCACAAGACAAC +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSLCSLY*CWPQDN
Trigger: GTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCAGCCTGTTCCACCCTaGAGAGGGCTGAGCATACAG +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRQPVPP*RGLSIQ
Trigger: CTGTATGCTCAGCCCTCTCCAGGGTGGAACAGGCTG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFSLSPL*LPRDGR
Trigger: CCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGA...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACCTCGGGCAAAATGGCTaGGCTGCCAAATTGGACGAC +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHLGQNG*AAKLDD
Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCCGAG...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCCCCATGGCATCCCCTaGCCTGGACTGGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDPHGIP*PGLETD
Trigger: ATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACCCCATGGCATCCCCTaGCCTGGACTGGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKPHGIP*PGLETD
Trigger: ATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCCCCATGGCATCCCCTaGCCTGGACTGGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVPHGIP*PGLETD
Trigger: ATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDLQGLG*WHLHQD
Trigger: GTCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGGGCGGTGACAATGTTTaGTGCATGGGCGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRGGDNV*CMGVVA
Trigger: GGCTACAACGCCCATGCAGCAAACATTGTCACCGCC...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSLRGSP*CHGFLE
Trigger: TTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGGCAGCAACTGTTAACTaGCACGTTCCGGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEAATVN*HVPAPP
Trigger: GGGTGGGGCCGGAACGTGGCAGTTAACAGTTGCTGC...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGCAGCAACTGTTAACTaGCACGTTCCGGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDAATVN*HVPAPP
Trigger: GGGTGGGGCCGGAACGTGGCAGTTAACAGTTGCTGC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCTCAAGGACATTCCTTaGAGTCCCCGCGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVLKDIP*SPRGSE
Trigger: CTCGGACCCGCGGGGACTGCAAGGAATGTCCTTGAG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR CCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCGCCGACGCTCAGCCTaGCTCCAGTTAACGCAGTCG +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIRRRSA*LQLTQS
Trigger: CGACTGCGTTAACTGGAGCCAGGCTGAGCGTCGGCG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGATGGACATCATGCAGATaGTCAGTGTCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: DARVPIPPSAALKLAQDGWTSCR*SVSLSP
Trigger: TGGGGACAGTGACACTGACCATCTGCATGATGTCCA...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTGCTGAGCTGCCAAATTaGACGACCCTCGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFAELPN*TTLAAF
Trigger: GAAAGCCGCGAGGGTCGTCCAATTTGGCAGCTCAGC...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCGCTGAGGTAGTAGGTTaGTCCCACCACCCACCGTTC +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSAEVVG*SHHPPF
Trigger: GAACGGTGGGTGGTGGGACCAACCTACTACCTCAGC...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTTTCAGGCTGTCTTCTTaGTGCAAGCTCCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSFRLSS*CKLLGG
Trigger: ACCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAA...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCAGTCACCAACCTCCTaGCCACAGGAACTAGGCACA +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRQSPTS*PQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTCAGCCTGTTCCACCCTaGAGAGGGCTGAGCATACAG +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFQPVPP*RGLSIQ
Trigger: CTGTATGCTCAGCCCTCTCCAGGGTGGAACAGGCTG...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLESLSPL*LPRDGR
Trigger: CCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCCTCGGGCAAAATGGCTaGGCTGCCAAATTGGACGAC +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCLGQNG*AAKLDD
Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCCGAG...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TCAAATGCCTCCTTTATCACTGCGAACCCTTCAGATGTTTCGAGCCAGGCTTTCCTCGGGCAAAATGGCTaGGCTGCCAAATTGGACGAC +
Preference number: 4 (lower is better)
Translates to: SNASFITANPSDVSSQAFLGQNG*AAKLDD
Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCCGAG...GAAAGCCTGGCTCGAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLIILTL*VTGFGL
Trigger: TAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGAT...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTGATACACCACGCTCATaGGTTTCCATCAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSDTPRS*VSIRVS
Trigger: GGAAACTCTGATGGAAACTCATGAGCGTGGTGTATC...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCCCATGGCATCCCCTaGCCTGGACTGGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRPHGIP*PGLETD
Trigger: ATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACTTAGCTCTTACTTCTTaGAGTTCTACATCCCAGACT +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHLALTS*SSTSQT
Trigger: AGTCTGGGATGTAGAACTTCAAGAAGTAAGAGCTAA...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTTCCACCAAGACCTATTaGTCTGCAGCCTCTATTGGT +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSSTKTY*SAASIG
Trigger: ACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGA...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGLQGLG*WHLHQD
Trigger: GTCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAG...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLETSHPI*KDSAAG
Trigger: GCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGT...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKTSHPI*KDSAAG
Trigger: GCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTGGCGGTGACAATGTTTaGTGCATGGGCGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFGGDNV*CMGVVA
Trigger: GGCTACAACGCCCATGCAGCAAACATTGTCACCGCC...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSTIRAS*RAFSPG
Trigger: TCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGT...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCCACATGCATCTCATTaGTCAGCAGATCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRPHASH*SADHPG
Trigger: GCCTGGGTGATCTGCTGAGCAATGAGATGCATGTGG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATGCCCTCCTACTTTTATaGTCCCTGCCAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNALLLL*SLPTGF
Trigger: GAAGCCAGTTGGCAGGGAGCATAAAAGTAGGAGGGC...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCATACACACCTTGTATaGTTAGCAGCTGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSHTHLV*LAAGTR
Trigger: CCTTGTGCCAGCTGCTAAGCATACAAGGTGTGTATG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCCCGCGGGTCCGAGCTaGCACACCGACAAAGCGCAA +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNPAGPS*HTDKAQ
Trigger: TTGCGCTTTGTCGGTGTGGCAGCTCGGACCCGCGGG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCGGGAAGTGGAGGTTaGAGTGAGCCAGGATCGTGC +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRPGSGG*SEPGSC
Trigger: GCACGATCCTGGCTCACTGCAACCTCCACTTCCCGG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCGCCGACGCTCAGCCTaGCTCCAGTTAACGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHRRRSA*LQLTQS
Trigger: CGACTGCGTTAACTGGAGCCAGGCTGAGCGTCGGCG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGCTGAGCTGCCAAATTaGACGACCCTCGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLAELPN*TTLAAF
Trigger: GAAAGCCGCGAGGGTCGTCCAATTTGGCAGCTCAGC...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTGGAAGACGCACAACTaGGCCACGAGTCATCCCATC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFWKTHN*ATSHPI
Trigger: GATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCRVTST*KTHNWA
Trigger: GGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCT...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAGCTGAGGTAGTAGGTTaGTCCCACCACCCACCGTTC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKAEVVG*SHHPPF
Trigger: GAACGGTGGGTGGTGGGACCAACCTACTACCTCAGC...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAAGGACTCGGCTGCTaGCACCTCCACCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRQGLGC*HLHQAR
Trigger: CCTTGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343975.9
CDS-3UTR CCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCCTAGTATCTGGGCCTTaGTTCTTTCTTAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLLVSGP*FFLSAH
Trigger: GTGAGCACTAAGAAAGAACCAAGGCCCAGATACTAG...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACAGCCTGTTCCACCCTaGAGAGGGCTGAGCATACAG +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTQPVPP*RGLSIQ
Trigger: CTGTATGCTCAGCCCTCTCCAGGGTGGAACAGGCTG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACTTTAAGCAGGTCCTCTaGGTAAATGCACACTCATTT +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHFKQVL*VNAHSF
Trigger: AAATGAGTGTGCATTTACCCAGAGGACCTGCTTAAA...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTGTATGCTTAGTTAGCTaGCGCGCACACACATACACA +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSVCLVS*RAHTYT
Trigger: TGTGTATGTGTGTGCGCGCCAGCTAACTAAGCATAC...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTSLSPL*LPRDGR
Trigger: CCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCACATAATTTCAAGCTaGCGTACCCCTGACATGGTA +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSHIISS*RTPDMV
Trigger: TACCATGTCAGGGGTACGTCAGCTTGAAATTATGTG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCTCGGGCAAAATGGCTaGGCTGCCAAATTGGACGAC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLLGQNG*AAKLDD
Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCCGAG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTTCTGCTGTACTGTTTTaGGGAGAAGGATCAGCTATC +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSSAVLF*GEGSAI
Trigger: GATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGA...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCCCATGGCATCCCCTaGCCTGGACTGGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHPHGIP*PGLETD
Trigger: ATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCCCCATGGCATCCCCTaGCCTGGACTGGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFPHGIP*PGLETD
Trigger: ATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCTGCAAACAGGCTTGCTaGGGTAGTAGGTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFCKQAC*GSRLVP
Trigger: TGGGACCAACCTACTACCTCAGCAAGCCTGTTTGCA...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGAAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: DARVPIPPSAALKLAQDGNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACCTCCTTCACTGGCTCTaGAAGCTGACTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHLLHWL*KLTFPF
Trigger: GAAAGGGAAAGTCAGCTTTCAGAGCCAGTGAAGGAG...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACCTCCAGCTGTTAGTGTaGGGCTCTTCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHLQLLV*GSSFGL
Trigger: AAGGCCAAAAGAAGAGCCTCACACTAACAGCTGGAG...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCTCCAGCTGTTAGTGTaGGGCTCTTCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRLQLLV*GSSFGL
Trigger: AAGGCCAAAAGAAGAGCCTCACACTAACAGCTGGAG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCCAATGCCCATGTTCCAGTTCAGAACTGTCGGGCTATTCAGGCTGTCTTCTAGTTTGACACCAGCCTaGCCAACATGGCGAAACACA +
Preference number: 4 (lower is better)
Translates to: NPMPMFQFRTVGLFRLSSSLTPA*PTWRNT
Trigger: TGTGTTTCGCCATGTTGGTCAGGCTGGTGTCAAACT...AGAAGACAGCCTGAATAGCCCGACAGTTCTGAACTGGAACATGGGCATTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR GCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCG +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCAKWLS*QIGRPS
Trigger: CGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGC...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACTGCAGCCTCTATTGGTaGTGGCCACAAGACAACCTT +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHCSLYW*WPQDNL
Trigger: AAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCA...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLLQGLG*WHLHQD
Trigger: GTCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAG...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTTSHPI*KDSAAG
Trigger: GCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACACGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGGCGGTGACAATGTTTaGTGCATGGGCGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDGGDNV*CMGVVA
Trigger: GGCTACAACGCCCATGCAGCAAACATTGTCACCGCC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGACCCCAGGATTATCTTTaGATGCTCCTTGAACACCTA +
Preference number: 4 (lower is better)
Translates to: DARVPIPPSAALKLAQDGPQDYL*MLLEHL
Trigger: TAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGG...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDTIRAS*RAFSPG
Trigger: TCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTTIRAS*RAFSPG
Trigger: TCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGT...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTGCCCATACCTCCCTCTaGAGCTCTCAAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFAHTSL*SSQTCS
Trigger: TGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGC...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGGCAGCAACTGTTAACTaGCACGTTCCGGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMAATVN*HVPAPP
Trigger: GGGTGGGGCCGGAACGTGGCAGTTAACAGTTGCTGC...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTGCAGCAACTGTTAACTaGCACGTTCCGGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFAATVN*HVPAPP
Trigger: GGGTGGGGCCGGAACGTGGCAGTTAACAGTTGCTGC...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTATTAGCCAACTGGAATaGTGTTGCCTGGGTCTAATC +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSISQLE*CCLGLI
Trigger: GATTAGACCCAGGCAACAGCATTCCAGTTGGCTAAT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCGCCCTCCTACTTTTATaGTCCCTGCCAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCALLLL*SLPTGF
Trigger: GAAGCCAGTTGGCAGGGAGCATAAAAGTAGGAGGGC...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCACACACACCCCGTATaGTTAGTTAGCTGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDHTHPV*LVSWRA
Trigger: TGCGCGCCAGCTAACTAAGCATACGGGGTGTGTGTG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCATGACTTCCCAGGGATaGGAGGCCACAAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVMTSQG*EATKRP
Trigger: TGGCCTCTTTGTGGCCTCCCATCCCTGGGAAGTCAT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ACAAGAGCATCGAGGGTAAACGTAGGACCTAAAATTGCCATTCCACGAGCAATAGCTGAGCTGCCAAATTaGACGACCCTCGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: TRASRVNVGPKIAIPRAIAELPN*TTLAAF
Trigger: GAAAGCCGCGAGGGTCGTCCAATTTGGCAGCTCAGC...TATTGCTCGTGGAATGGCAATTTTAGGTCCTACGTTTACCCTCGATGCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAAAACTCGGGCAAAATaGCTGAGCTGCCAAATTGGA +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSKTRAK*LSCQIG
Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGGGTAAATGCACACTTGGTTCAATTCTCTTaGACACATTTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: AGAGPSSLFKQVLWVNAHLVQFS*THFHPV
Trigger: GACTGGATGAAAATGTGTCCAAGAGAATTGAACCAA...GTGTGCATTTACCCAGAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCGTTCTGAAAGCTTCTTaGAAAGTAACTGTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLVLKAS*KVTVGE
Trigger: TTCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAAC...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGAGCCTCTATTGGTGCTaGCCACAAGACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRSLYWC*PQDNLL
Trigger: CAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCTGGAAGACGCACAACTaGGCCACGAGTCATCCCATC +
Preference number: 4 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACWKTHN*ATSHPI
Trigger: GATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKRVTST*KTHNWA
Trigger: GGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVRVTST*KTHNWA
Trigger: GGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAGCTGAGGTAGTAGGTTaGTCCCACCACCCACCGTTC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAAEVVG*SHHPPF
Trigger: GAACGGTGGGTGGTGGGACCAACCTACTACCTCAGC...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACAGTCACCAACCTCCTaGCCACAGGAACTAGGCACA +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTQSPTS*PQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGAGCTGCCATGGTTTCCTaGAATGTTTTTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: DARVPIPPSAALKLAQDGAAMVS*NVFQSP
Trigger: TGGACTCTGAAAAACATTCCAGGAAACCATGGCAGC...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGTCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMSLSPL*LPRDGR
Trigger: CCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGA...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGTCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLSLSPL*LPRDGR
Trigger: CCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGA...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHSLSPL*LPRDGR
Trigger: CCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACCCTGTGAGTTGGAACTaGGGGCAAACTTTGCTAATG +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHPVSWN*GQTLLM
Trigger: CATTAGCAAAGTTTGCCCTCAGTTCCAACTCACAGG...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCCTTACTTCATCCTGTaGGTTGGAACTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRPYFIL*VGTEGK
Trigger: TTTGCCCTCAGTTCCAACTCACAGGATGAAGTAAGG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCGTAGTTGGCAAGAACTaGCATGCAGCCAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCVVGKN*HAAKAA
Trigger: TGCTGCTTTGGCTGCATGTCAGTTCTTGCCAACTAC...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACACTCGGGCAAAATGGCTaGGCTGCCAAATTGGACGAC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTLGQNG*AAKLDD
Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCCGAG...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACTCGGGCAAAATGGCTaGGCTGCCAAATTGGACGAC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNALGQNG*AAKLDD
Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCCGAG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCCCCATGGCATCCCCTaGCCTGGACTGGAAACGGAT +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDPHGIP*PGLETD
Trigger: ATCCGTTTCCAGTCCAGGTCAGGGGATGCCATGGGG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTGCAAACAGGCTTGCTaGGGTAGTAGGTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLECKQAC*GSRLVP
Trigger: TGGGACCAACCTACTACCTCAGCAAGCCTGTTTGCA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287936.9
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTCTCCTTCACTGGCTCTaGAAGCTGACTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFLLHWL*KLTFPF
Trigger: GAAAGGGAAAGTCAGCTTTCAGAGCCAGTGAAGGAG...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCCAATGCCCATGTTCCAGTTCAGAACTGTCGGGCTATTCAGGCTGTCTTCTATGGGGAGTGGACAGTaGTACATACCCTTAACAGGA +
Preference number: 4 (lower is better)
Translates to: NPMPMFQFRTVGLFRLSSMGSGQ*YIPLTG
Trigger: TCCTGTTAAGGGTATGTATCACTGTCCACTCCCCAT...AGAAGACAGCCTGAATAGCCCGACAGTTCTGAACTGGAACATGGGCATTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAATGAGCATTTTCTTTaGGTGTCAGGTTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSNEHFL*VSGWCS
Trigger: TGAGCACCAACCTGACACTCAAAGAAAATGCTCATT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCG +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLAKWLS*QIGRPS
Trigger: CGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGC...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTGCAGCCTCTATTGGTaGTGGCCACAAGACAACCTT +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSCSLYW*WPQDNL
Trigger: AAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCA...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCCAAGACCTATTGCTCTaGAGCCTCTATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCQDLLL*SLYWCW
Trigger: CCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTG...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCCAAGACCTATTGCTCTaGAGCCTCTATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSQDLLL*SLYWCW
Trigger: CCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTG...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLTSHPI*KDSAAG
Trigger: GCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGT...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAGGCGGTGACAATGTTTaGTGCATGGGCGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTGGDNV*CMGVVA
Trigger: GGCTACAACGCCCATGCAGCAAACATTGTCACCGCC...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGACCAACATTCTGTGCTaGATCCTGTCCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRTNILC*ILSTGN
Trigger: ATTGCCTGTGGACAGGATGCAGCACAGAATGTTGGT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTTIRAS*RAFSPG
Trigger: TCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCTCCTGCGTCTTCTGTaGGTTCCTTCTGCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHLLRLL*VPSALR
Trigger: GCGGAGAGCAGAAGGAACGCACAGAAGACGCAGGAG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCATAGGTGATGGCAAATaGCTCTCTCTGGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSIGDGK*LSLGQS
Trigger: TGACTGCCCCAGAGAGAGGCATTTGCCATCACCTAT...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGTGAGCCAGGATCGTaGCATTACACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTSEPGS*HYTPAW
Trigger: CCAGGCTGGAGTGTAATGGCACGATCCTGGCTCACT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCGCCGACGCTCAGCCTaGCTCCAGTTAACGCAGTCG +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFRRRSA*LQLTQS
Trigger: CGACTGCGTTAACTGGAGCCAGGCTGAGCGTCGGCG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTGGACATCATGCAGATaGTCAGTGTCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFWTSCR*SVSLSP
Trigger: TGGGGACAGTGACACTGACCATCTGCATGATGTCCA...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAAATGTAGCTCTGTTTaGGGTATCTGTTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSKCSSV*GICFSH
Trigger: GTGGCTGAAACAGATACCCCAAACAGAGCTACATTT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGATTCCAACTTGTAGGCTaGGATATGCTTAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: DARVPIPPSAALKLAQDGFQLVG*DMLSID
Trigger: GTCAATGCTAAGCATATCCCAGCCTACAAGTTGGAA...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCAGCCTCTATTGGTGCTaGCCACAAGACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCSLYWC*PQDNLL
Trigger: CAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCT...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCTCTGCAGCCTCTATTaGTGCTGGCCACAAGACAAC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLLCSLY*CWPQDN
Trigger: GTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATGGAAGACGCACAACTaGGCCACGAGTCATCCCATC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTWKTHN*ATSHPI
Trigger: GATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTGGAAGACGCACAACTaGGCCACGAGTCATCCCATC +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIWKTHN*ATSHPI
Trigger: GATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATGGAAGACGCACAACTaGGCCACGAGTCATCCCATC +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRWKTHN*ATSHPI
Trigger: GATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTRVTST*KTHNWA
Trigger: GGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATGCTGAGGTAGTAGGTTaGTCCCACCACCCACCGTTC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHAEVVG*SHHPPF
Trigger: GAACGGTGGGTGGTGGGACCAACCTACTACCTCAGC...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTTTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCTTCAGGCTGTCTTCTTaGTGCAAGCTCCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFFRLSS*CKLLGG
Trigger: ACCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAA...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTTTAAGCAGGTCCTCTaGGTAAATGCACACTCATTT +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLFKQVL*VNAHSF
Trigger: AAATGAGTGTGCATTTACCCAGAGGACCTGCTTAAA...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCGGTGAGGATGGGGAGTaGACAGTGATACATACCCTT +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSGEDGE*TVIHTL
Trigger: AAGGGTATGTATCACTGTCCACTCCCCATCCTCACC...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACTCAGAATTAGCCAACTaGAATGCTGTTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHSELAN*NAVAWV
Trigger: GACCCAGGCAACAGCATTCCAGTTGGCTAATTCTGA...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAATACACAAATTAAATaGGCATGGTGGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSNTQIK*AWWQVP
Trigger: AGGCACCTGCCACCATGCCCATTTAATTTGTGTATT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATTCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDSLSPL*LPRDGR
Trigger: CCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGA...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAGTAGTTGGCAAGAACTaGCATGCAGCCAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKVVGKN*HAAKAA
Trigger: TGCTGCTTTGGCTGCATGTCAGTTCTTGCCAACTAC...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGTAGTTGGCAAGAACTaGCATGCAGCCAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDVVGKN*HAAKAA
Trigger: TGCTGCTTTGGCTGCATGTCAGTTCTTGCCAACTAC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTGATACACCACGCTCATaGGTTTCCATCAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFDTPRS*VSIRVS
Trigger: GGAAACTCTGATGGAAACTCATGAGCGTGGTGTATC...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCGATACACCACGCTCATaGGTTTCCATCAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSDTPRS*VSIRVS
Trigger: GGAAACTCTGATGGAAACTCATGAGCGTGGTGTATC...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCAATGTAGATGGCGGTaGCAATGTTTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEQCRWR*QCLLHG
Trigger: CCCATGCAGCAAACATTGTCACCGCCATCTACATTG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACAATGTAGATGGCGGTaGCAATGTTTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKQCRWR*QCLLHG
Trigger: CCCATGCAGCAAACATTGTCACCGCCATCTACATTG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTGCAAACAGGCTTGCTaGGGTAGTAGGTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSICKQAC*GSRLVP
Trigger: TGGGACCAACCTACTACCTCAGCAAGCCTGTTTGCA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFTGSES*LSLSLG
Trigger: GCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGT...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCTCCAGCTGTTAGTGTaGGGCTCTTCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDLQLLV*GSSFGL
Trigger: AAGGCCAAAAGAAGAGCCTCACACTAACAGCTGGAG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACCTCAAATCTCTGACTaGACAGGGACGATGAACGCA +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKPQISD*TGTMNA
Trigger: TGCGTTCATCGTCCCTGTTCAGTCAGAGATTTGAGG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAAAGTGGAGGTTGCAGTaGGCCAGGATCGTGCCATTA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRKWRLQ*ARIVPL
Trigger: TAATGGCACGATCCTGGCTCACTGCAACCTCCACTT...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACTGTTCATGGACATCATaGAGATGGTCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHCSWTS*RWSVSL
Trigger: CAGTGACACTGACCATCTGCATGATGTCCATGAACA...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCAAACTTTGCTAATGTaGTTGCTCTGGAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSQTLLM*LLWKGQ
Trigger: TTGACCTTTCCAGAGCAAGCACATTAGCAAAGTTTG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCG +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRAKWLS*QIGRPS
Trigger: CGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTGCAGCCTCTATTGGTaGTGGCCACAAGACAACCTT +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLECSLYW*WPQDNL
Trigger: AAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCAAGACCTATTGCTCTaGAGCCTCTATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDQDLLL*SLYWCW
Trigger: CCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQLQGLG*WHLHQD
Trigger: GTCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFLQGLG*WHLHQD
Trigger: GTCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAG...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCAGGCTTTCACTTCTaGAGAGTCACAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRPGFHF*RVTSTW
Trigger: CCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATGCTAGTGCTGTCAAATaGCTCCTTTATCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNASAVK*LLYHCE
Trigger: TTCGCAGTGATAAAGGAGGCATTTGACAGCACTAGC...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCAACGGATATAAAGGTTaGGTCCAGCTATACTTGTAT +
Preference number: 4 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLNGYKG*VQLYLY
Trigger: ATACAAGTATAGCTGGACGCAACCTTTATATCCGTT...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGGGCGGTGACAATGTTTaGTGCATGGGCGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMGGDNV*CMGVVA
Trigger: GGCTACAACGCCCATGCAGCAAACATTGTCACCGCC...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCACCAACATTCTGTGCTaGATCCTGTCCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSTNILC*ILSTGN
Trigger: ATTGCCTGTGGACAGGATGCAGCACAGAATGTTGGT...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFTIRAS*RAFSPG
Trigger: TCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMTIRAS*RAFSPG
Trigger: TCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGAGGCTGTCTTCTTGGTaGAAGCTCCTTGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLERLSSW*KLLGGL
Trigger: AAGACCTCCAAGGAGCTTGCACCAAGAAGACAGCCT...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAGGCTGTCTTCTTGGTaGAAGCTCCTTGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDRLSSW*KLLGGL
Trigger: AAGACCTCCAAGGAGCTTGCACCAAGAAGACAGCCT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCCTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACLRGSP*CHGFLE
Trigger: TTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAG...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSLQGLG*WHLHQA
Trigger: TGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343975.9
CDS-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTGCTTCCTACGACTCTaGAGGACCATGTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSCFLRL*RTMSKK
Trigger: CTTCTTAGACATGGTCCTGCAGAGTCGTAGGAAGCA...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR GCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTGGGACGCCGAAATCATaGACATTTAGTATAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFGTPKS*TFSIAQ
Trigger: CTGGGCTATACTAAATGTGCATGATTTCGGCGTCCC...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACCACATGCATCTCATTaGTCAGCAGATCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAPHASH*SADHPG
Trigger: GCCTGGGTGATCTGCTGAGCAATGAGATGCATGTGG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCTCCTGTCCTGCCACATaGATCTCATTGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVSCPAT*ISLLSR
Trigger: TCTGCTGAGCAATGAGATGCATGTGGCAGGACAGGA...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAGCCCATACCTCCCTCTaGAGCTCTCAAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTAHTSL*SSQTCS
Trigger: TGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGC...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTATCCTGATGCAAGAGTaGCCATACCTCCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIILMQE*PYLPLQ
Trigger: CTGCAGAGGGAGGTATGGGCACTCTTGCATCAGGAT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAATCCTGATGCAAGAGTaGCCATACCTCCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAILMQE*PYLPLQ
Trigger: CTGCAGAGGGAGGTATGGGCACTCTTGCATCAGGAT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGATAGGTGATGGCAAATaGCTCTCTCTGGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLIGDGK*LSLGQS
Trigger: TGACTGCCCCAGAGAGAGGCATTTGCCATCACCTAT...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCAACTGGAATGCTGTTaGCTGGGTCTAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLQLECC*LGLILL
Trigger: GAGCAGGATTAGACCCAGGCAACAGCATTCCAGTTG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCACACACACCCCGTATaGTTAGTTAGCTGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHHTHPV*LVSWRA
Trigger: TGCGCGCCAGCTAACTAAGCATACGGGGTGTGTGTG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAGGGAAGCTCCAGAATTaGCACCAACACAGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAGKLQN*HQHSPN
Trigger: GTTTGGGCTGTGTTGGTGGCAATTCTGGAGCTTCCC...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR GCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCTGAGGCAGGAGAACTaGTTGAACCCGGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHLRQEN*LNPGSG
Trigger: TCCACTTCCCGGGTTCAAGCAGTTCTCCTGCCTCAG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTGGACATCATGCAGATaGTCAGTGTCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLWTSCR*SVSLSP
Trigger: TGGGGACAGTGACACTGACCATCTGCATGATGTCCA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACATGGACATCATGCAGATaGTCAGTGTCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTWTSCR*SVSLSP
Trigger: TGGGGACAGTGACACTGACCATCTGCATGATGTCCA...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTGGACATCATGCAGATaGTCAGTGTCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDWTSCR*SVSLSP
Trigger: TGGGGACAGTGACACTGACCATCTGCATGATGTCCA...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCGCTGAGCTGCCAAATTaGACGACCCTCGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSAELPN*TTLAAF
Trigger: GAAAGCCGCGAGGGTCGTCCAATTTGGCAGCTCAGC...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATGCTGAGCTGCCAAATTaGACGACCCTCGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDAELPN*TTLAAF
Trigger: GAAAGCCGCGAGGGTCGTCCAATTTGGCAGCTCAGC...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGAAAACTCGGGCAAAATaGCTGAGCTGCCAAATTGGA +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRKTRAK*LSCQIG
Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACAAAACTCGGGCAAAATaGCTGAGCTGCCAAATTGGA +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHKTRAK*LSCQIG
Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTT...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCAGCCTCTATTGGTGCTaGCCACAAGACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVSLYWC*PQDNLL
Trigger: CAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCTCTGCAGCCTCTATTaGTGCTGGCCACAAGACAAC +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSILCSLY*CWPQDN
Trigger: GTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHRVTST*KTHNWA
Trigger: GGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCT...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACTCTGACAACCTTGGCTaGAATGACAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHSDNLG*NDSFTN
Trigger: GTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGA...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCTATGCTCCCAGCCATaGCAGAGCCCACTAAATTCT +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLLCSQP*QSPLNS
Trigger: AGAATTTAGTGGGCTCTGCCATGGCTGGGAGCATAG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCTATGCTCCCAGCCATaGCAGAGCCCACTAAATTCT +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVLCSQP*QSPLNS
Trigger: AGAATTTAGTGGGCTCTGCCATGGCTGGGAGCATAG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACTATGCTCCCAGCCATaGCAGAGCCCACTAAATTCT +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTLCSQP*QSPLNS
Trigger: AGAATTTAGTGGGCTCTGCCATGGCTGGGAGCATAG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCCTATGCTCCCAGCCATaGCAGAGCCCACTAAATTCT +
Preference number: 4 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACLCSQP*QSPLNS
Trigger: AGAATTTAGTGGGCTCTGCCATGGCTGGGAGCATAG...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCGCTGAGGTAGTAGGTTaGTCCCACCACCCACCGTTC +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSAEVVG*SHHPPF
Trigger: GAACGGTGGGTGGTGGGACCAACCTACTACCTCAGC...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287936.9
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTTCAGGCTGTCTTCTTaGTGCAAGCTCCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDFRLSS*CKLLGG
Trigger: ACCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAA...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACATTCAGGCTGTCTTCTTaGTGCAAGCTCCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTFRLSS*CKLLGG
Trigger: ACCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAA...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCTGAGGAGTCTGCATaGAAAGAACCTGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSSEESA*KEPETS
Trigger: AGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGA...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTGAACATTATCTTCTCTaGCCCAGGCTAGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSEHYLL*PRLEYF
Trigger: AAAATACTCTAGCCTGGGCCAGAGAAGATAATGTTC...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCAGTCACCAACCTCCTaGCCACAGGAACTAGGCACA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHQSPTS*PQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCAGTCACCAACCTCCTaGCCACAGGAACTAGGCACA +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFQSPTS*PQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCTCTCCATGCTGCCATaGTTTCCTGGAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRLSMLP*FPGMFF
Trigger: GAAAAACATTCCAGGAAACCATGGCAGCATGGAGAG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAATCCTTGGATCCTTGTaGGACGCCGAAATCATGCAC +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTILGSL*DAEIMH
Trigger: GTGCATGATTTCGGCGTCCCACAAGGATCCAAGGAT...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR CCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACCTTAAATGCTTGCAATaGCTGTTTGGTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHLKCLQ*LFGCGC
Trigger: GCAGCCACAACCAAACAGCCATTGCAAGCATTTAAG...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCAGCCTGTTCCACCCTaGAGAGGGCTGAGCATACAG +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNQPVPP*RGLSIQ
Trigger: CTGTATGCTCAGCCCTCTCCAGGGTGGAACAGGCTG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTCAAACTTGCTCAGGATaGAAAACAAGCGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFQTCSG*KTSGRD
Trigger: ATCCCTGCCGCTTGTTTTCCATCCTGAGCAAGTTTG...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCCAAACTTGCTCAGGATaGAAAACAAGCGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFQTCSG*KTSGRD
Trigger: ATCCCTGCCGCTTGTTTTCCATCCTGAGCAAGTTTG...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTGTATGCTTAGCAGCTaGCACAAGGCCCTCCTACTT +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDCMLSS*HKALLL
Trigger: AAGTAGGAGGGCCTTGTGCCAGCTGCTAAGCATACA...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCGTATGCTTAGTTAGCTaGCGCGCACACACATACACA +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFVCLVS*RAHTYT
Trigger: TGTGTATGTGTGTGCGCGCCAGCTAACTAAGCATAC...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCGTATGCTTAGTTAGCTaGCGCGCACACACATACACA +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSVCLVS*RAHTYT
Trigger: TGTGTATGTGTGTGCGCGCCAGCTAACTAAGCATAC...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCCTGTGAGTTGGAACTaGGGGCAAACTTTGCTAATG +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDPVSWN*GQTLLM
Trigger: CATTAGCAAAGTTTGCCCTCAGTTCCAACTCACAGG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCCTTACTTCATCCTGTaGGTTGGAACTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDPYFIL*VGTEGK
Trigger: TTTGCCCTCAGTTCCAACTCACAGGATGAAGTAAGG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCCCTTACTTCATCCTGTaGGTTGGAACTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACPYFIL*VGTEGK
Trigger: TTTGCCCTCAGTTCCAACTCACAGGATGAAGTAAGG...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGTAGTTGGCAAGAACTaGCATGCAGCCAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRVVGKN*HAAKAA
Trigger: TGCTGCTTTGGCTGCATGTCAGTTCTTGCCAACTAC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTCTGGGAAGAAAGTCATaGACACGAAGTAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFLGRKS*TRSSWQ
Trigger: TTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAG...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCCTGGGAAGAAAGTCATaGACACGAAGTAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFLGRKS*TRSSWQ
Trigger: TTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAG...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCTCGGGCAAAATGGCTaGGCTGCCAAATTGGACGAC +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDLGQNG*AAKLDD
Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCCGAG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TCAAATGCCTCCTTTATCACTGCGAACCCTTCAGATGTTTCGAGCCAGGCTTTCATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: SNASFITANPSDVSSQAFIILTL*VTGFGL
Trigger: TAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGAT...GAAAGCCTGGCTCGAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTCTGCTGTACTGTTTTaGGGAGAAGGATCAGCTATC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFSAVLF*GEGSAI
Trigger: GATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGA...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TCAAATGCCTCCTTTATCACTGCGAACCCTTCAGATGTTTCGAGCCAGGCTTTCTCTGCTGTACTGTTTTaGGGAGAAGGATCAGCTATC +
Preference number: 4 (lower is better)
Translates to: SNASFITANPSDVSSQAFSAVLF*GEGSAI
Trigger: GATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGA...GAAAGCCTGGCTCGAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCCAAAGAAGATGTACTTaGCAGCCAGAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCQRRCT*QPEGEL
Trigger: TAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTG...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGATACACCACGCTCATaGGTTTCCATCAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDDTPRS*VSIRVS
Trigger: GGAAACTCTGATGGAAACTCATGAGCGTGGTGTATC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATCCAGCTATACTTGTATaGAGTTTCTGTAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNPAILV*SFCRRA
Trigger: TGCACGTCTACAGAAACTTCATACAAGTATAGCTGG...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCAACCTTGGCTGGAATaGCAGCTTCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDQPWLE*QLHKQQ
Trigger: CTGTTGTTTGTGAAGCTGTCATTCCAGCCAAGGTTG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACAACCTTGGCTGGAATaGCAGCTTCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTQPWLE*QLHKQQ
Trigger: CTGTTGTTTGTGAAGCTGTCATTCCAGCCAAGGTTG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCAACCTTGGCTGGAATaGCAGCTTCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLQPWLE*QLHKQQ
Trigger: CTGTTGTTTGTGAAGCTGTCATTCCAGCCAAGGTTG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCAATGTAGATGGCGGTaGCAATGTTTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIQCRWR*QCLLHG
Trigger: CCCATGCAGCAAACATTGTCACCGCCATCTACATTG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCCAATGTAGATGGCGGTaGCAATGTTTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGQCRWR*QCLLHG
Trigger: CCCATGCAGCAAACATTGTCACCGCCATCTACATTG...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGTGCAAACAGGCTTGCTaGGGTAGTAGGTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMCKQAC*GSRLVP
Trigger: TGGGACCAACCTACTACCTCAGCAAGCCTGTTTGCA...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGTGCAAACAGGCTTGCTaGGGTAGTAGGTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLCKQAC*GSRLVP
Trigger: TGGGACCAACCTACTACCTCAGCAAGCCTGTTTGCA...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCATTTGCCTTCAGAGGTaGGCTGTAGATTACCATCTC +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCICLQR*AVDYHL
Trigger: GAGATGGTAATCTACAGCTCACCTCTGAAGGCAAAT...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 4 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTAGTCTTGCTTGTACTTaGCAGTCACCCTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFSLACT*QSPSSK
Trigger: CTTAGATGAGGGTGACTGTCAAGTACAAGCAAGACT...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCTCCTTCACTGGCTCTaGAAGCTGACTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSILLHWL*KLTFPF
Trigger: GAAAGGGAAAGTCAGCTTTCAGAGCCAGTGAAGGAG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTCCTGTATCGTCTCCTaGAATCAAACATCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFSCIVS*NQTSCP
Trigger: AGGACAGGATGTTTGATTTCAGGAGACGATACAGGA...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAAGAAAACTCACATCCTaGTGCAAGAGTGCCCATACC +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTRKLTS*CKSAHT
Trigger: GGTATGGGCACTCTTGCATCAGGATGTGAGTTTTCT...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ACAAGAGCATCGAGGGTAAACGTAGGACCTAAAATTGCCATTCCACGAGCAATACTCCAGCTGTTAGTGTaGGGCTCTTCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TRASRVNVGPKIAIPRAILQLLV*GSSFGL
Trigger: AAGGCCAAAAGAAGAGCCTCACACTAACAGCTGGAG...TATTGCTCGTGGAATGGCAATTTTAGGTCCTACGTTTACCCTCGATGCTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCGGTAAACGGAATAGGTaGTGGCAAATGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACGKRNR*WQMPLS
Trigger: AGAGAGAGGCATTTGCCATCACCTATTCCGTTTACC...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAATGGGGAGTGGACAGTaGTACATACCCTTAACAGGA +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTMGSGQ*YIPLTG
Trigger: TCCTGTTAAGGGTATGTATCACTGTCCACTCCCCAT...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTGTTCATGGACATCATaGAGATGGTCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSCSWTS*RWSVSL
Trigger: CAGTGACACTGACCATCTGCATGATGTCCATGAACA...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCG +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFAKWLS*QIGRPS
Trigger: CGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGC...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTGCAGCCTCTATTGGTaGTGGCCACAAGACAACCTT +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSICSLYW*WPQDNL
Trigger: AAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCAAGACCTATTGCTCTaGAGCCTCTATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIQDLLL*SLYWCW
Trigger: CCAGCACCAATAGAGGCTGCAGAGCAATAGGTCTTG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCTCCACCAAGACCTATTaGTCTGCAGCCTCTATTGGT +
Preference number: 4 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACSTKTY*SAASIG
Trigger: ACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGA...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFTSHPI*KDSAAG
Trigger: GCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGT...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCCAGGCTTTCACTTCTaGAGAGTCACAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFPGFHF*RVTSTW
Trigger: CCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCAGGCTTTCACTTCTaGAGAGTCACAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHPGFHF*RVTSTW
Trigger: CCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGAAACGGATATAAAGGTTaGGTCCAGCTATACTTGTAT +
Preference number: 4 (lower is better)
Translates to: DARVPIPPSAALKLAQDGNGYKG*VQLYLY
Trigger: ATACAAGTATAGCTGGACGCAACCTTTATATCCGTT...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATGGCGGTGACAATGTTTaGTGCATGGGCGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDGGDNV*CMGVVA
Trigger: GGCTACAACGCCCATGCAGCAAACATTGTCACCGCC...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACGGCGGTGACAATGTTTaGTGCATGGGCGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNGGDNV*CMGVVA
Trigger: GGCTACAACGCCCATGCAGCAAACATTGTCACCGCC...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAACTACCAACATTCTGTaGTGCATCCTGTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNATTNIL*CILSTG
Trigger: GCCTGTGGACAGGATGCAGCACAGAATGTTGGTAGT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAACTACCAACATTCTGTaGTGCATCCTGTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTTTNIL*CILSTG
Trigger: GCCTGTGGACAGGATGCAGCACAGAATGTTGGTAGT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GATGATCTCAGCATCACTAAGGAATTTTGCACCTTTCTCTGCATTCCCAAGTATACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: DDLSITKEFCTFLCIPKYTIRAS*RAFSPG
Trigger: TCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGT...ATACTTGGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGATGCTGAGATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR GCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCTTTGACAAGATGTCCTaGTGCCAATGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCFDKMS*CQCCHK
Trigger: CTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGGCTGTCTTCTTGGTaGAAGCTCCTTGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTRLSSW*KLLGGL
Trigger: AAGACCTCCAAGGAGCTTGCACCAAGAAGACAGCCT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTAGGCTGTCTTCTTGGTaGAAGCTCCTTGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIRLSSW*KLLGGL
Trigger: AAGACCTCCAAGGAGCTTGCACCAAGAAGACAGCCT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAAGGCTGTCTTCTTGGTaGAAGCTCCTTGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRRLSSW*KLLGGL
Trigger: AAGACCTCCAAGGAGCTTGCACCAAGAAGACAGCCT...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACTCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCTAAGGTCCCAGTCTTaGTTGTACTTGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDLRSQS*LYLTVT
Trigger: GGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCCTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGLRGSP*CHGFLE
Trigger: TTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAG...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACTGCTCTCCGCCTGGTaGAGGGCTTTATTATGTCTT +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNALLSAW*RALLCL
Trigger: AAGACATAATAAAGCCCTGCACCAGGCGGAGAGCAG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGCCACATGCATCTCATTaGTCAGCAGATCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMPHASH*SADHPG
Trigger: GCCTGGGTGATCTGCTGAGCAATGAGATGCATGTGG...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTCCTGTCCTGCCACATaGATCTCATTGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSISCPAT*ISLLSR
Trigger: TCTGCTGAGCAATGAGATGCATGTGGCAGGACAGGA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TCAAATGCCTCCTTTATCACTGCGAACCCTTCAGATGTTTCGAGCCAGGCTTTCTCAAACATCCTGTCCTaGCACATGCATCTCATTGCT +
Preference number: 4 (lower is better)
Translates to: SNASFITANPSDVSSQAFSNILS*HMHLIA
Trigger: AGCAATGAGATGCATGTGGCAGGACAGGATGTTTGA...GAAAGCCTGGCTCGAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR GCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTGCAGCTCTCAAACTTaGTCAGGATGGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFCSSQT*SGWKTS
Trigger: GCTTGTTTTCCATCCTGAGCAAGTTTGAGAGCTGCA...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATGCCCATACCTCCCTCTaGAGCTCTCAAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHAHTSL*SSQTCS
Trigger: TGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGC...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAATAGGTGATGGCAAATaGCTCTCTCTGGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAIGDGK*LSLGQS
Trigger: TGACTGCCCCAGAGAGAGGCATTTGCCATCACCTAT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCAACTGGAATGCTGTTaGCTGGGTCTAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIQLECC*LGLILL
Trigger: GAGCAGGATTAGACCCAGGCAACAGCATTCCAGTTG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGGCCCTCCTACTTTTATaGTCCCTGCCAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLALLLL*SLPTGF
Trigger: GAAGCCAGTTGGCAGGGAGCATAAAAGTAGGAGGGC...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACATACACACCTTGTATaGTTAGCAGCTGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTHTHLV*LAAGTR
Trigger: CCTTGTGCCAGCTGCTAAGCATACAAGGTGTGTATG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAGACGTACCCCTGACATaGTACCAACTCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKDVPLT*YQLQSQ
Trigger: TTGTGATTGGAGTTGGTACCATGTCAGGGGTACGTC...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTGCTGAGCTGCCAAATTaGACGACCCTCGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFAELPN*TTLAAF
Trigger: GAAAGCCGCGAGGGTCGTCCAATTTGGCAGCTCAGC...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAAGCCTCTATTGGTGCTaGCCACAAGACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRSLYWC*PQDNLL
Trigger: CAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCT...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCTCTGCAGCCTCTATTaGTGCTGGCCACAAGACAAC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHLCSLY*CWPQDN
Trigger: GTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCTCTGCAGCCTCTATTaGTGCTGGCCACAAGACAAC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFLCSLY*CWPQDN
Trigger: GTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCTGGAAGACGCACAACTaGGCCACGAGTCATCCCATC +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSWKTHN*ATSHPI
Trigger: GATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSRVTST*KTHNWA
Trigger: GGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCT...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAATGGCATCCCCTGACCTaGACTGGAAACGGATATAAA +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKWHPLT*TGNGYK
Trigger: TTTATATCCGTTTCCAGTCCAGGTCAGGGGATGCCA...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTGGCATCCCCTGACCTaGACTGGAAACGGATATAAA +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEWHPLT*TGNGYK
Trigger: TTTATATCCGTTTCCAGTCCAGGTCAGGGGATGCCA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATTCAGGCTGTCTTCTTaGTGCAAGCTCCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRFRLSS*CKLLGG
Trigger: ACCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTCAGGCTGTCTTCTTaGTGCAAGCTCCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAFRLSS*CKLLGG
Trigger: ACCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAA...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTTCAGGCTGTCTTCTTaGTGCAAGCTCCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIFRLSS*CKLLGG
Trigger: ACCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTCTGAGGAGTCTGCATaGAAAGAACCTGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLESEESA*KEPETS
Trigger: AGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCCTCTCCATGCTGCCATaGTTTCCTGGAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCLSMLP*FPGMFF
Trigger: GAAAAACATTCCAGGAAACCATGGCAGCATGGAGAG...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCCTTAAATGCTTGCAATaGCTGTTTGGTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFLKCLQ*LFGCGC
Trigger: GCAGCCACAACCAAACAGCCATTGCAAGCATTTAAG...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCGGTGAGGATGGGGAGTaGACAGTGATACATACCCTT +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGGEDGE*TVIHTL
Trigger: AAGGGTATGTATCACTGTCCACTCCCCATCCTCACC...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATAACTTGAGAAAATTGTaGAAAGGCCAGCAATACCCA +
Preference number: 4 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNNLRKL*KGQQYP
Trigger: TGGGTATTGCTGGCCTTTTCACAATTTTCTCAAGTT...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCCTGTGAGTTGGAACTaGGGGCAAACTTTGCTAATG +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIPVSWN*GQTLLM
Trigger: CATTAGCAAAGTTTGCCCTCAGTTCCAACTCACAGG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCTTACTTCATCCTGTaGGTTGGAACTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRPYFIL*VGTEGK
Trigger: TTTGCCCTCAGTTCCAACTCACAGGATGAAGTAAGG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCACATAATTTCAAGCTaGCGTACCCCTGACATGGTA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDHIISS*RTPDMV
Trigger: TACCATGTCAGGGGTACGTCAGCTTGAAATTATGTG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACACATAATTTCAAGCTaGCGTACCCCTGACATGGTA +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKHIISS*RTPDMV
Trigger: TACCATGTCAGGGGTACGTCAGCTTGAAATTATGTG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTGTAGTTGGCAAGAACTaGCATGCAGCCAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFVVGKN*HAAKAA
Trigger: TGCTGCTTTGGCTGCATGTCAGTTCTTGCCAACTAC...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCTGGGAAGAAAGTCATaGACACGAAGTAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDLGRKS*TRSSWQ
Trigger: TTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCCTGGGAAGAAAGTCATaGACACGAAGTAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACLGRKS*TRSSWQ
Trigger: TTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAG...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLIILTL*VTGFGL
Trigger: TAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGAT...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTCTGCTGTACTGTTTTaGGGAGAAGGATCAGCTATC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLSAVLF*GEGSAI
Trigger: GATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCAAAGAAGATGTACTTaGCAGCCAGAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLQRRCT*QPEGEL
Trigger: TAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCCCAGCTATACTTGTATaGAGTTTCTGTAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSPAILV*SFCRRA
Trigger: TGCACGTCTACAGAAACTTCATACAAGTATAGCTGG...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATTTTCTCTGTACCCTTTaGAATCATGTTCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNFLCTL*NHVHPH
Trigger: ATGGGGATGAACATGATTTCAAAGGGTACAGAGAAA...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATATACTCGTGAAGTTTTaGAAGTGCTTTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNILVKF*KCFLCT
Trigger: GGTACAGAGAAAGCACTTTCAAAACTTCACGAGTAT...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAACCTTGGCTGGAATaGCAGCTTCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRQPWLE*QLHKQQ
Trigger: CTGTTGTTTGTGAAGCTGTCATTCCAGCCAAGGTTG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCCAACCTTGGCTGGAATaGCAGCTTCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGQPWLE*QLHKQQ
Trigger: CTGTTGTTTGTGAAGCTGTCATTCCAGCCAAGGTTG...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCAATGTAGATGGCGGTaGCAATGTTTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFQCRWR*QCLLHG
Trigger: CCCATGCAGCAAACATTGTCACCGCCATCTACATTG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGAGTCTTGCTTGTACTTaGCAGTCACCCTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLSLACT*QSPSSK
Trigger: CTTAGATGAGGGTGACTGTCAAGTACAAGCAAGACT...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGAGTCTTGCTTGTACTTaGCAGTCACCCTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLESLACT*QSPSSK
Trigger: CTTAGATGAGGGTGACTGTCAAGTACAAGCAAGACT...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAGTCTTGCTTGTACTTaGCAGTCACCCTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACSLACT*QSPSSK
Trigger: CTTAGATGAGGGTGACTGTCAAGTACAAGCAAGACT...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGC +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGTGSES*LSLSLG
Trigger: GCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGT...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTCCTGTATCGTCTCCTaGAATCAAACATCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDSCIVS*NQTSCP
Trigger: AGGACAGGATGTTTGATTTCAGGAGACGATACAGGA...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCTTTTGCTCTTCAGTGTaGGATGTGCCCCTTAGATTT +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFFCSSV*DVPLRF
Trigger: AAATCTAAGGGGCACATCTCACACTGAAGAGCAAAA...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACCCAAGCACACCAAAATaGAAAAAGCAATCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHPSTPK*KKQSVK
Trigger: CTTAACGGATTGCTTTTTTCATTTTGGTGTGCTTGG...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ACAAGAGCATCGAGGGTAAACGTAGGACCTAAAATTGCCATTCCACGAGCAATAAGAAAACTCACATCCTaGTGCAAGAGTGCCCATACC +
Preference number: 4 (lower is better)
Translates to: TRASRVNVGPKIAIPRAIRKLTS*CKSAHT
Trigger: GGTATGGGCACTCTTGCATCAGGATGTGAGTTTTCT...TATTGCTCGTGGAATGGCAATTTTAGGTCCTACGTTTACCCTCGATGCTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCCAGGCACCTCATACTaGAATTCCAACCTATTAGTG +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLPGTSY*NSNLLV
Trigger: CACTAATAGGTTGGAATTTCAGTATGAGGTGCCTGG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGGTAAACGGAATAGGTaGTGGCAAATGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRGKRNR*WQMPLS
Trigger: AGAGAGAGGCATTTGCCATCACCTATTCCGTTTACC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGCCACAAAGAGGCCATaGATTCGAAAAAGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDATKRP*IRKSLD
Trigger: GTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCG +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDAKWLS*QIGRPS
Trigger: CGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGC...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCCAGGCTTTCACTTCTaGAGAGTCACAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDPGFHF*RVTSTW
Trigger: CCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCCAGGCTTTCACTTCTaGAGAGTCACAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNPGFHF*RVTSTW
Trigger: CCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCCCAGGCTTTCACTTCTaGAGAGTCACAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSPGFHF*RVTSTW
Trigger: CCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGG...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTGCCTCCTTTATCACTaGGAACCCTTCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDCLLYH*EPFRCF
Trigger: GAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCA...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTGCCTCCTTTATCACTaGGAACCCTTCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLCLLYH*EPFRCF
Trigger: GAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTGCCTCCTTTATCACTaGGAACCCTTCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLECLLYH*EPFRCF
Trigger: GAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCGCTAGTGCTGTCAAATaGCTCCTTTATCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVASAVK*LLYHCE
Trigger: TTCGCAGTGATAAAGGAGGCATTTGACAGCACTAGC...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTAGTGCTGTCAAATaGCTCCTTTATCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTASAVK*LLYHCE
Trigger: TTCGCAGTGATAAAGGAGGCATTTGACAGCACTAGC...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGCTAGTGCTGTCAAATaGCTCCTTTATCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDASAVK*LLYHCE
Trigger: TTCGCAGTGATAAAGGAGGCATTTGACAGCACTAGC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTGGCGGTGACAATGTTTaGTGCATGGGCGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCGGDNV*CMGVVA
Trigger: GGCTACAACGCCCATGCAGCAAACATTGTCACCGCC...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAACCAACATTCTGTGCTaGATCCTGTCCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNATNILC*ILSTGN
Trigger: ATTGCCTGTGGACAGGATGCAGCACAGAATGTTGGT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAACCAACATTCTGTGCTaGATCCTGTCCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTTNILC*ILSTGN
Trigger: ATTGCCTGTGGACAGGATGCAGCACAGAATGTTGGT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTACTACCAACATTCTGTaGTGCATCCTGTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFTTNIL*CILSTG
Trigger: GCCTGTGGACAGGATGCAGCACAGAATGTTGGTAGT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTA +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVPQDYL*MLLEHL
Trigger: TAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTA +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLPQDYL*MLLEHL
Trigger: TAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSTIRAS*RAFSPG
Trigger: TCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGT...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTACAATTCGGGCAAGCTaGCGGGCATTTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFTIRAS*RAFSPG
Trigger: TCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTTTGACAAGATGTCCTaGTGCCAATGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLFDKMS*CQCCHK
Trigger: CTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAATTTGACAAGATGTCCTaGTGCCAATGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKFDKMS*CQCCHK
Trigger: CTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGAGGCTGTCTTCTTGGTaGAAGCTCCTTGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLRLSSW*KLLGGL
Trigger: AAGACCTCCAAGGAGCTTGCACCAAGAAGACAGCCT...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACTAAGGTCCCAGTCTTaGTTGTACTTGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNALRSQS*LYLTVT
Trigger: GGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFLRGSP*CHGFLE
Trigger: TTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTTCTGTGCGTTCCTTCTaGTCTCCGCCTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVSVRSF*SPPGAG
Trigger: CCCTGCACCAGGCGGAGAGCAGAAGGAACGCACAGA...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGGGACGCCGAAATCATaGACATTTAGTATAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRGTPKS*TFSIAQ
Trigger: CTGGGCTATACTAAATGTGCATGATTTCGGCGTCCC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTGCAGCTCTCAAACTTaGTCAGGATGGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLECSSQT*SGWKTS
Trigger: GCTTGTTTTCCATCCTGAGCAAGTTTGAGAGCTGCA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGCAACTGGAATGCTGTTaGCTGGGTCTAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMQLECC*LGLILL
Trigger: GAGCAGGATTAGACCCAGGCAACAGCATTCCAGTTG...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGATTAGCCAACTGGAATaGTGTTGCCTGGGTCTAATC +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEISQLE*CCLGLI
Trigger: GATTAGACCCAGGCAACAGCATTCCAGTTGGCTAAT...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACATACACACCTTGTATaGTTAGCAGCTGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAHTHLV*LAAGTR
Trigger: CCTTGTGCCAGCTGCTAAGCATACAAGGTGTGTATG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCACACACACCCCGTATaGTTAGTTAGCTGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSHTHPV*LVSWRA
Trigger: TGCGCGCCAGCTAACTAAGCATACGGGGTGTGTGTG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAATCCAAACTCCAAATaGTGCAATGAGCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSNPNSK*CNEHFL
Trigger: AAGAAAATGCTCATTGCAGCATTTGGAGTTTGGATT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS-3UTR GCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGATCCTTTATCCAAAATaGTTGGGACCAGAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRILYPK*LGPEAF
Trigger: AAACGCTTCTGGTCCCAAGCATTTTGGATAAAGGAT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS-3UTR CCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTGGACATCATGCAGATaGTCAGTGTCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFWTSCR*SVSLSP
Trigger: TGGGGACAGTGACACTGACCATCTGCATGATGTCCA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAGACGTACCCCTGACATaGTACCAACTCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTDVPLT*YQLQSQ
Trigger: TTGTGATTGGAGTTGGTACCATGTCAGGGGTACGTC...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGAGCCTCTATTGGTGCTaGCCACAAGACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMSLYWC*PQDNLL
Trigger: CAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTGGAAGACGCACAACTaGGCCACGAGTCATCCCATC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCWKTHN*ATSHPI
Trigger: GATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCAAGAGTCACAAGCACGTaGAAGACGCACAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSRVTST*KTHNWA
Trigger: GGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCT...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATGGCATCCCCTGACCTaGACTGGAAACGGATATAAA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRWHPLT*TGNGYK
Trigger: TTTATATCCGTTTCCAGTCCAGGTCAGGGGATGCCA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCTGGCATCCCCTGACCTaGACTGGAAACGGATATAAA +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGWHPLT*TGNGYK
Trigger: TTTATATCCGTTTCCAGTCCAGGTCAGGGGATGCCA...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTCTGACAACCTTGGCTaGAATGACAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDSDNLG*NDSFTN
Trigger: GTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGA...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTCTGACAACCTTGGCTaGAATGACAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLSDNLG*NDSFTN
Trigger: GTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACATCTGACAACCTTGGCTaGAATGACAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTSDNLG*NDSFTN
Trigger: GTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGA...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCTATGCTCCCAGCCATaGCAGAGCCCACTAAATTCT +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHLCSQP*QSPLNS
Trigger: AGAATTTAGTGGGCTCTGCCATGGCTGGGAGCATAG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCTATGCTCCCAGCCATaGCAGAGCCCACTAAATTCT +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFLCSQP*QSPLNS
Trigger: AGAATTTAGTGGGCTCTGCCATGGCTGGGAGCATAG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCTTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTCTGAGGAGTCTGCATaGAAAGAACCTGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSISEESA*KEPETS
Trigger: AGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATCTGAGGAGTCTGCATaGAAAGAACCTGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNASEESA*KEPETS
Trigger: AGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGA...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACGAACATTATCTTCTCTaGCCCAGGCTAGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHEHYLL*PRLEYF
Trigger: AAAATACTCTAGCCTGGGCCAGAGAAGATAATGTTC...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCAGTCACCAACCTCCTaGCCACAGGAACTAGGCACA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCQSPTS*PQELGT
Trigger: TGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGCTGCCATGGTTTCCTaGAATGTTTTTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDAAMVS*NVFQSP
Trigger: TGGACTCTGAAAAACATTCCAGGAAACCATGGCAGC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCTTAAATGCTTGCAATaGCTGTTTGGTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVLKCLQ*LFGCGC
Trigger: GCAGCCACAACCAAACAGCCATTGCAAGCATTTAAG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAAACTTGCTCAGGATaGAAAACAAGCGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRQTCSG*KTSGRD
Trigger: ATCCCTGCCGCTTGTTTTCCATCCTGAGCAAGTTTG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGTTTAAGCAGGTCCTCTaGGTAAATGCACACTCATTT +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRFKQVL*VNAHSF
Trigger: AAATGAGTGTGCATTTACCCAGAGGACCTGCTTAAA...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATCAGAATTAGCCAACTaGAATGCTGTTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTSELAN*NAVAWV
Trigger: GACCCAGGCAACAGCATTCCAGTTGGCTAATTCTGA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGTATGCTTAGTTAGCTaGCGCGCACACACATACACA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRVCLVS*RAHTYT
Trigger: TGTGTATGTGTGTGCGCGCCAGCTAACTAAGCATAC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGTTTATCCAAAATGCTTaGGACCAGAAGCGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRFIQNA*DQKRFR
Trigger: TCTGAAACGCTTCTGGTCCCAAGCATTTTGGATAAA...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCCTGTGAGTTGGAACTaGGGGCAAACTTTGCTAATG +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFPVSWN*GQTLLM
Trigger: CATTAGCAAAGTTTGCCCTCAGTTCCAACTCACAGG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCCTTACTTCATCCTGTaGGTTGGAACTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFPYFIL*VGTEGK
Trigger: TTTGCCCTCAGTTCCAACTCACAGGATGAAGTAAGG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACACATAATTTCAAGCTaGCGTACCCCTGACATGGTA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRHIISS*RTPDMV
Trigger: TACCATGTCAGGGGTACGTCAGCTTGAAATTATGTG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACTGGGAAGAAAGTCATaGACACGAAGTAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNALGRKS*TRSSWQ
Trigger: TTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTGGGAAGAAAGTCATaGACACGAAGTAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRLGRKS*TRSSWQ
Trigger: TTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIIILTL*VTGFGL
Trigger: TAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGAT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRIILTL*VTGFGL
Trigger: TAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGAT...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATCTGCTGTACTGTTTTaGGGAGAAGGATCAGCTATC +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRSAVLF*GEGSAI
Trigger: GATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACAAAGAAGATGTACTTaGCAGCCAGAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAQRRCT*QPEGEL
Trigger: TAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACACAAAGAAGATGTACTTaGCAGCCAGAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTQRRCT*QPEGEL
Trigger: TAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTG...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCAAAGAAGATGTACTTaGCAGCCAGAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIQRRCT*QPEGEL
Trigger: TAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCCAGCTATACTTGTATaGAGTTTCTGTAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVPAILV*SFCRRA
Trigger: TGCACGTCTACAGAAACTTCATACAAGTATAGCTGG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCTTTCTCTGTACCCTTTaGAATCATGTTCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFFLCTL*NHVHPH
Trigger: ATGGGGATGAACATGATTTCAAAGGGTACAGAGAAA...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCATACTCGTGAAGTTTTaGAAGTGCTTTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSILVKF*KCFLCT
Trigger: GGTACAGAGAAAGCACTTTCAAAACTTCACGAGTAT...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCAACCTTGGCTGGAATaGCAGCTTCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFQPWLE*QLHKQQ
Trigger: CTGTTGTTTGTGAAGCTGTCATTCCAGCCAAGGTTG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCAATGTAGATGGCGGTaGCAATGTTTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNQCRWR*QCLLHG
Trigger: CCCATGCAGCAAACATTGTCACCGCCATCTACATTG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTGCAAACAGGCTTGCTaGGGTAGTAGGTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFCKQAC*GSRLVP
Trigger: TGGGACCAACCTACTACCTCAGCAAGCCTGTTTGCA...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNANLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNANCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAATTTGCCTTCAGAGGTaGGCTGTAGATTACCATCTC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTICLQR*AVDYHL
Trigger: GAGATGGTAATCTACAGCTCACCTCTGAAGGCAAAT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAAGTCTTGCTTGTACTTaGCAGTCACCCTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRSLACT*QSPSSK
Trigger: CTTAGATGAGGGTGACTGTCAAGTACAAGCAAGACT...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCACTGTGTTTCTACAATaGTTTCTAAGGTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSTVFLQ*FLRSQS
Trigger: AGACTGGGACCTTAGAAATCATTGTAGAAACACAGT...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCTCCTTCACTGGCTCTaGAAGCTGACTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNLLHWL*KLTFPF
Trigger: GAAAGGGAAAGTCAGCTTTCAGAGCCAGTGAAGGAG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACTCCAAGAGCAACACTTaGAGCATTAGATGTAATACA +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHSKSNT*SIRCNT
Trigger: TGTATTACATCTAATGCTTCAAGTGTTGCTCTTGGA...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACATCACTGCCACTTCCATaGAAAGCTCAGAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTSLPLP*KAQKKS
Trigger: TGACTTTTTCTGAGCTTTTCATGGAAGTGGCAGTGA...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCTACAGGTTACTACTATaGCCAGACTTTACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCYRLLL*PDFTSF
Trigger: GAAGCTTGTAAAGTCTGGTCATAGTAGTAACCTGTA...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCCCAAGCACACCAAAATaGAAAAAGCAATCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSPSTPK*KKQSVK
Trigger: CTTAACGGATTGCTTTTTTCATTTTGGTGTGCTTGG...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGGGTAAACGGAATAGGTaGTGGCAAATGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLGKRNR*WQMPLS
Trigger: AGAGAGAGGCATTTGCCATCACCTATTCCGTTTACC...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATATGGGGAGTGGACAGTaGTACATACCCTTAACAGGA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHMGSGQ*YIPLTG
Trigger: TCCTGTTAAGGGTATGTATCACTGTCCACTCCCCAT...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAGCCACAAAGAGGCCATaGATTCGAAAAAGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAATKRP*IRKSLD
Trigger: GTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGC...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTGTTCATGGACATCATaGAGATGGTCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSICSWTS*RWSVSL
Trigger: CAGTGACACTGACCATCTGCATGATGTCCATGAACA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCCAAACTTTGCTAATGTaGTTGCTCTGGAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCQTLLM*LLWKGQ
Trigger: TTGACCTTTCCAGAGCAAGCACATTAGCAAAGTTTG...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCG +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFAKWLS*QIGRPS
Trigger: CGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGC...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGGCAAAATGGCTGAGCTaGCAAATTGGACGACCCTCG +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQAKWLS*QIGRPS
Trigger: CGAGGGTCGTCCAATTTGGCAGCTCAGCCATTTTGC...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTCCACCAAGACCTATTaGTCTGCAGCCTCTATTGGT +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFSTKTY*SAASIG
Trigger: ACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGTCCACCAAGACCTATTaGTCTGCAGCCTCTATTGGT +
Preference number: 4 (lower is better)
Translates to: EMCPLDLILYRLLKSNILSTKTY*SAASIG
Trigger: ACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGA...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGCTAGTGCTGTCAAATaGCTCCTTTATCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRASAVK*LLYHCE
Trigger: TTCGCAGTGATAAAGGAGGCATTTGACAGCACTAGC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACAACGGATATAAAGGTTaGGTCCAGCTATACTTGTAT +
Preference number: 4 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHNGYKG*VQLYLY
Trigger: ATACAAGTATAGCTGGACGCAACCTTTATATCCGTT...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCTAACGGCTAGAATCTaGATTTCAGGGAAATACTCG +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVLTARI*ISGKYS
Trigger: CGAGTATTTCCCTGAAATGCAGATTCTAGCCGTTAG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCTAACGGCTAGAATCTaGATTTCAGGGAAATACTCG +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLLTARI*ISGKYS
Trigger: CGAGTATTTCCCTGAAATGCAGATTCTAGCCGTTAG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCGTTGTAGCCTCCTATaGTCCCAGCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVRCSLL*SQPWQS
Trigger: GCTCTGCCATGGCTGGGAGCATAGGAGGCTACAACG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGACCAACATTCTGTGCTaGATCCTGTCCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMTNILC*ILSTGN
Trigger: ATTGCCTGTGGACAGGATGCAGCACAGAATGTTGGT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCACTACCAACATTCTGTaGTGCATCCTGTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSTTNIL*CILSTG
Trigger: GCCTGTGGACAGGATGCAGCACAGAATGTTGGTAGT...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTA +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIPQDYL*MLLEHL
Trigger: TAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCTAAGGTCCCAGTCTTaGTTGTACTTGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFLRSQS*LYLTVT
Trigger: GGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGCTAAGGTCCCAGTCTTaGTTGTACTTGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLLRSQS*LYLTVT
Trigger: GGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAG...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDLRGSP*CHGFLE
Trigger: TTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATGCAGAACTCCCACATaGAGTATGTGGCATACTACT +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRCRTPT*SMWHTT
Trigger: AGTAGTATGCCACATACTGCATGTGGGAGTTCTGCA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR GCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCACAGCTTAAATGCTTaGAATGGCTGTTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVHSLNA*NGCLVV
Trigger: CACAACCAAACAGCCATTGCAAGCATTTAAGCTGTG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACTCACACAGCTTAAATaGTTGCAATGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKLTQLK*LQWLFG
Trigger: ACCAAACAGCCATTGCAAGCATTTAAGCTGTGTGAG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTCAAACATCCTGTCCTaGCACATGCATCTCATTGCT +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSISNILS*HMHLIA
Trigger: AGCAATGAGATGCATGTGGCAGGACAGGATGTTTGA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACTTCAGTGTGAGATGTaGCCCTTAGATTTAATCCTG +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTLQCEM*PLDLIL
Trigger: CAGGATTAAATCTAAGGGGCACATCTCACACTGAAG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCTGCAGCTCTCAAACTTaGTCAGGATGGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGCSSQT*SGWKTS
Trigger: GCTTGTTTTCCATCCTGAGCAAGTTTGAGAGCTGCA...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATGCAGCTCTCAAACTTaGTCAGGATGGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNACSSQT*SGWKTS
Trigger: GCTTGTTTTCCATCCTGAGCAAGTTTGAGAGCTGCA...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTATCCTGATGCAAGAGTaGCCATACCTCCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFILMQE*PYLPLQ
Trigger: CTGCAGAGGGAGGTATGGGCACTCTTGCATCAGGAT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTACTTTTATGCTCCCTaGCAACTGGCTTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSYFYAP*QLASEL
Trigger: TAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAGTA...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTGCCCTCCTACTTTTATaGTCCCTGCCAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCALLLL*SLPTGF
Trigger: GAAGCCAGTTGGCAGGGAGCATAAAAGTAGGAGGGC...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGGACATCATGCAGATaGTCAGTGTCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNWTSCR*SVSLSP
Trigger: TGGGGACAGTGACACTGACCATCTGCATGATGTCCA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATGACGTACCCCTGACATaGTACCAACTCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHDVPLT*YQLQSQ
Trigger: TTGTGATTGGAGTTGGTACCATGTCAGGGGTACGTC...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGGACGTACCCCTGACATaGTACCAACTCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: EMCPLDLILYRLLKSNILDVPLT*YQLQSQ
Trigger: TTGTGATTGGAGTTGGTACCATGTCAGGGGTACGTC...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGGACGTACCCCTGACATaGTACCAACTCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLDVPLT*YQLQSQ
Trigger: TTGTGATTGGAGTTGGTACCATGTCAGGGGTACGTC...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAAAAACTCGGGCAAAATaGCTGAGCTGCCAAATTGGA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRKTRAK*LSCQIG
Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTT...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAAAATGTAGCTCTGTTTaGGGTATCTGTTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKKCSSV*GICFSH
Trigger: GTGGCTGAAACAGATACCCCAAACAGAGCTACATTT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTTCCAACTTGTAGGCTaGGATATGCTTAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDFQLVG*DMLSID
Trigger: GTCAATGCTAAGCATATCCCAGCCTACAAGTTGGAA...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTTCCAACTTGTAGGCTaGGATATGCTTAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLFQLVG*DMLSID
Trigger: GTCAATGCTAAGCATATCCCAGCCTACAAGTTGGAA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGGTTCTGAAAGCTTCTTaGAAAGTAACTGTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEVLKAS*KVTVGE
Trigger: TTCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAAC...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACAGCCTCTATTGGTGCTaGCCACAAGACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNSLYWC*PQDNLL
Trigger: CAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCTCTGCAGCCTCTATTaGTGCTGGCCACAAGACAAC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFLCSLY*CWPQDN
Trigger: GTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCTCTGCAGCCTCTATTaGTGCTGGCCACAAGACAAC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQLCSLY*CWPQDN
Trigger: GTTGTCTTGTGGCCAGCACCAATAGAGGCTGCAGAG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTGGCATCCCCTGACCTaGACTGGAAACGGATATAAA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHWHPLT*TGNGYK
Trigger: TTTATATCCGTTTCCAGTCCAGGTCAGGGGATGCCA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ACAAGAGCATCGAGGGTAAACGTAGGACCTAAAATTGCCATTCCACGAGCAATATCTGACAACCTTGGCTaGAATGACAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: TRASRVNVGPKIAIPRAISDNLG*NDSFTN
Trigger: GTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGA...TATTGCTCGTGGAATGGCAATTTTAGGTCCTACGTTTACCCTCGATGCTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAATTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTTCAGGCTGTCTTCTTaGTGCAAGCTCCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNFRLSS*CKLLGG
Trigger: ACCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAGCTGCCATGGTTTCCTaGAATGTTTTTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAAAMVS*NVFQSP
Trigger: TGGACTCTGAAAAACATTCCAGGAAACCATGGCAGC...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACACTCTCCATGCTGCCATaGTTTCCTGGAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTLSMLP*FPGMFF
Trigger: GAAAAACATTCCAGGAAACCATGGCAGCATGGAGAG...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATATCCTTGGATCCTTGTaGGACGCCGAAATCATGCAC +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDILGSL*DAEIMH
Trigger: GTGCATGATTTCGGCGTCCCACAAGGATCCAAGGAT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR CCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACTAGTATCTGGGCCTTaGTTCTTTCTTAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNALVSGP*FFLSAH
Trigger: GTGAGCACTAAGAAAGAACCAAGGCCCAGATACTAG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTTAAGCAGGTCCTCTaGGTAAATGCACACTCATTT +
Preference number: 4 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFFKQVL*VNAHSF
Trigger: AAATGAGTGTGCATTTACCCAGAGGACCTGCTTAAA...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTCAGAATTAGCCAACTaGAATGCTGTTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFSELAN*NAVAWV
Trigger: GACCCAGGCAACAGCATTCCAGTTGGCTAATTCTGA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCCATTCGAAAAAGTCTTaGCAACATTGTAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFHSKKS*QHCSYR
Trigger: TCTGTAGCTACAATGTTGTCAAGACTTTTTCGAATG...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAACTTGAGAAAATTGTaGAAAGGCCAGCAATACCCA +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDNLRKL*KGQQYP
Trigger: TGGGTATTGCTGGCCTTTTCACAATTTTCTCAAGTT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCAACTTGAGAAAATTGTaGAAAGGCCAGCAATACCCA +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVNLRKL*KGQQYP
Trigger: TGGGTATTGCTGGCCTTTTCACAATTTTCTCAAGTT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAAACTTGAGAAAATTGTaGAAAGGCCAGCAATACCCA +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTNLRKL*KGQQYP
Trigger: TGGGTATTGCTGGCCTTTTCACAATTTTCTCAAGTT...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGCACATAATTTCAAGCTaGCGTACCCCTGACATGGTA +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMHIISS*RTPDMV
Trigger: TACCATGTCAGGGGTACGTCAGCTTGAAATTATGTG...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTGTAGTTGGCAAGAACTaGCATGCAGCCAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFVVGKN*HAAKAA
Trigger: TGCTGCTTTGGCTGCATGTCAGTTCTTGCCAACTAC...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCTCGGGCAAAATGGCTaGGCTGCCAAATTGGACGAC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVLGQNG*AAKLDD
Trigger: GTCGTCCAATTTGGCAGCTCAGCCATTTTGCCCGAG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFIILTL*VTGFGL
Trigger: TAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGAT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTCTGCTGTACTGTTTTaGGGAGAAGGATCAGCTATC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHSAVLF*GEGSAI
Trigger: GATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCGATACACCACGCTCATaGGTTTCCATCAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSDTPRS*VSIRVS
Trigger: GGAAACTCTGATGGAAACTCATGAGCGTGGTGTATC...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCACCAGCTATACTTGTATaGAGTTTCTGTAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAPAILV*SFCRRA
Trigger: TGCACGTCTACAGAAACTTCATACAAGTATAGCTGG...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCCCAGCTATACTTGTATaGAGTTTCTGTAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGPAILV*SFCRRA
Trigger: TGCACGTCTACAGAAACTTCATACAAGTATAGCTGG...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAATTTCTCTGTACCCTTTaGAATCATGTTCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKFLCTL*NHVHPH
Trigger: ATGGGGATGAACATGATTTCAAAGGGTACAGAGAAA...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACATACTCGTGAAGTTTTaGAAGTGCTTTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDILVKF*KCFLCT
Trigger: GGTACAGAGAAAGCACTTTCAAAACTTCACGAGTAT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCAATGTAGATGGCGGTaGCAATGTTTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQQCRWR*QCLLHG
Trigger: CCCATGCAGCAAACATTGTCACCGCCATCTACATTG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGATTTGCCTTCAGAGGTaGGCTGTAGATTACCATCTC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMICLQR*AVDYHL
Trigger: GAGATGGTAATCTACAGCTCACCTCTGAAGGCAAAT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGATTTGCCTTCAGAGGTaGGCTGTAGATTACCATCTC +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLICLQR*AVDYHL
Trigger: GAGATGGTAATCTACAGCTCACCTCTGAAGGCAAAT...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCTTAGCTCTTACTTCTTaGAGTTCTACATCCCAGACT +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVLALTS*SSTSQT
Trigger: AGTCTGGGATGTAGAACTTCAAGAAGTAAGAGCTAA...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACGAGTGTTTCTTCCCTTaGAGAAAACAGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNECFFP*RKQVPF
Trigger: GAAGGGGACCTGTTTTCTTCAAGGGAAGAAACACTC...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGC +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSTGSES*LSLSLG
Trigger: GCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGT...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCTCCTTCACTGGCTCTaGAAGCTGACTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQLLHWL*KLTFPF
Trigger: GAAAGGGAAAGTCAGCTTTCAGAGCCAGTGAAGGAG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTCACTGCCACTTCCATaGAAAGCTCAGAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSISLPLP*KAQKKS
Trigger: TGACTTTTTCTGAGCTTTTCATGGAAGTGGCAGTGA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATCACTGCCACTTCCATaGAAAGCTCAGAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRSLPLP*KAQKKS
Trigger: TGACTTTTTCTGAGCTTTTCATGGAAGTGGCAGTGA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACATACAGGTTACTACTATaGCCAGACTTTACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTYRLLL*PDFTSF
Trigger: GAAGCTTGTAAAGTCTGGTCATAGTAGTAACCTGTA...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGCCAGGCACCTCATACTaGAATTCCAACCTATTAGTG +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLPGTSY*NSNLLV
Trigger: CACTAATAGGTTGGAATTTCAGTATGAGGTGCCTGG...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCATATCCTCAAATCTCTaGCTGAACAGGGACGATGAA +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGISSNL*LNRDDE
Trigger: TTCATCGTCCCTGTTCAGTCAGAGATTTGAGGATAT...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGTGTTCATGGACATCATaGAGATGGTCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMCSWTS*RWSVSL
Trigger: CAGTGACACTGACCATCTGCATGATGTCCATGAACA...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCAAACTTTGCTAATGTaGTTGCTCTGGAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLQTLLM*LLWKGQ
Trigger: TTGACCTTTCCAGAGCAAGCACATTAGCAAAGTTTG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAATCACTAAGGAATTTTaGACCTTTCTCTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKITKEF*TFLCIP
Trigger: GGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGAT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTGCAGCCTCTATTGGTaGTGGCCACAAGACAACCTT +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCCSLYW*WPQDNL
Trigger: AAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTGCAGCCTCTATTGGTaGTGGCCACAAGACAACCTT +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFCSLYW*WPQDNL
Trigger: AAGGTTGTCTTGTGGCCAGCACCAATAGAGGCTGCA...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATTCCACCAAGACCTATTaGTCTGCAGCCTCTATTGGT +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDSTKTY*SAASIG
Trigger: ACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGA...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTCCACCAAGACCTATTaGTCTGCAGCCTCTATTGGT +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNSTKTY*SAASIG
Trigger: ACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTGCCTCCTTTATCACTaGGAACCCTTCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFCLLYH*EPFRCF
Trigger: GAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTGCCTCCTTTATCACTaGGAACCCTTCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHCLLYH*EPFRCF
Trigger: GAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGTGCCTCCTTTATCACTaGGAACCCTTCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLCLLYH*EPFRCF
Trigger: GAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCA...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCAACGGATATAAAGGTTaGGTCCAGCTATACTTGTAT +
Preference number: 4 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFNGYKG*VQLYLY
Trigger: ATACAAGTATAGCTGGACGCAACCTTTATATCCGTT...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCCTAACGGCTAGAATCTaGATTTCAGGGAAATACTCG +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGLTARI*ISGKYS
Trigger: CGAGTATTTCCCTGAAATGCAGATTCTAGCCGTTAG...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTGGCGGTGACAATGTTTaGTGCATGGGCGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVGGDNV*CMGVVA
Trigger: GGCTACAACGCCCATGCAGCAAACATTGTCACCGCC...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACACCAACATTCTGTGCTaGATCCTGTCCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNTNILC*ILSTGN
Trigger: ATTGCCTGTGGACAGGATGCAGCACAGAATGTTGGT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTACTACCAACATTCTGTaGTGCATCCTGTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFTTNIL*CILSTG
Trigger: GCCTGTGGACAGGATGCAGCACAGAATGTTGGTAGT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTGACAAGATGTCCTaGTGCCAATGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFFDKMS*CQCCHK
Trigger: CTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGTTTGACAAGATGTCCTaGTGCCAATGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLFDKMS*CQCCHK
Trigger: CTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTAGGCTGTCTTCTTGGTaGAAGCTCCTTGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFRLSSW*KLLGGL
Trigger: AAGACCTCCAAGGAGCTTGCACCAAGAAGACAGCCT...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSISFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCTCTGAACAAATAGCCTaGGGAGATAAATACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LLCSLPTGFRISQLECCCSEQIA*GDKYSD
Trigger: ATCACTGTATTTATCTCCGCAGGCTATTTGTTCAGA...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCTAAGAGGCTCTCCATaGTGCCATGGTTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQLRGSP*CHGFLE
Trigger: TTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCTTCCCAATCTGTCCTaGAGAACTCCCACATGCAGT +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCLPNLS*RTPTCS
Trigger: ACTGCATGTGGGAGTTCTGCAGGACAGATTGGGAAG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACAGAATCCTTGGATCCTaGGTCTCTCTCTCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNRILGS*VSLSCV
Trigger: CACACAAGAGAGAGAGACGCAGGATCCAAGGATTCT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR GCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATTGCTTCCTACGACTCTaGAGGACCATGTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDCFLRL*RTMSKK
Trigger: CTTCTTAGACATGGTCCTGCAGAGTCGTAGGAAGCA...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACACACAGCTTAAATGCTTaGAATGGCTGTTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTHSLNA*NGCLVV
Trigger: CACAACCAAACAGCCATTGCAAGCATTTAAGCTGTG...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTCCTGTCCTGCCACATaGATCTCATTGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFSCPAT*ISLLSR
Trigger: TCTGCTGAGCAATGAGATGCATGTGGCAGGACAGGA...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGATAGGTGATGGCAAATaGCTCTCTCTGGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQIGDGK*LSLGQS
Trigger: TGACTGCCCCAGAGAGAGGCATTTGCCATCACCTAT...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCAACTGGAATGCTGTTaGCTGGGTCTAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQQLECC*LGLILL
Trigger: GAGCAGGATTAGACCCAGGCAACAGCATTCCAGTTG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGTGGACATCATGCAGATaGTCAGTGTCACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQWTSCR*SVSLSP
Trigger: TGGGGACAGTGACACTGACCATCTGCATGATGTCCA...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ACAAGAGCATCGAGGGTAAACGTAGGACCTAAAATTGCCATTCCACGAGCAATATTCCAACTTGTAGGCTaGGATATGCTTAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: TRASRVNVGPKIAIPRAIFQLVG*DMLSID
Trigger: GTCAATGCTAAGCATATCCCAGCCTACAAGTTGGAA...TATTGCTCGTGGAATGGCAATTTTAGGTCCTACGTTTACCCTCGATGCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAGTTCTGAAAGCTTCTTaGAAAGTAACTGTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTVLKAS*KVTVGE
Trigger: TTCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAAC...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTGTTCTGAAAGCTTCTTaGAAAGTAACTGTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIVLKAS*KVTVGE
Trigger: TTCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAAC...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCTATGCTCCCAGCCATaGCAGAGCCCACTAAATTCT +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCLCSQP*QSPLNS
Trigger: AGAATTTAGTGGGCTCTGCCATGGCTGGGAGCATAG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCTATGCTCCCAGCCATaGCAGAGCCCACTAAATTCT +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFLCSQP*QSPLNS
Trigger: AGAATTTAGTGGGCTCTGCCATGGCTGGGAGCATAG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTCTGAGGAGTCTGCATaGAAAGAACCTGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNSEESA*KEPETS
Trigger: AGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACAAGCCAGGGTTTCCTaGACAACATTAAAGAACATT +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKQARVS*TTLKNI
Trigger: AATGTTCTTTAATGTTGTCCAGGAAACCCTGGCTTG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCAAGCCAGGGTTTCCTaGACAACATTAAAGAACATT +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEQARVS*TTLKNI
Trigger: AATGTTCTTTAATGTTGTCCAGGAAACCCTGGCTTG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCCAAGCCAGGGTTTCCTaGACAACATTAAAGAACATT +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVQARVS*TTLKNI
Trigger: AATGTTCTTTAATGTTGTCCAGGAAACCCTGGCTTG...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTGCTGCCATGGTTTCCTaGAATGTTTTTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFAAMVS*NVFQSP
Trigger: TGGACTCTGAAAAACATTCCAGGAAACCATGGCAGC...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTGGTGAGGATGGGGAGTaGACAGTGATACATACCCTT +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFGEDGE*TVIHTL
Trigger: AAGGGTATGTATCACTGTCCACTCCCCATCCTCACC...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTGTATGCTTAGCAGCTaGCACAAGGCCCTCCTACTT +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSCMLSS*HKALLL
Trigger: AAGTAGGAGGGCCTTGTGCCAGCTGCTAAGCATACA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGCAAATTAAATGGGCATaGTGGCAGGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: EMCPLDLILYRLLKSNILQIKWA*WQVPVI
Trigger: GATTACAGGCACCTGCCACCATGCCCATTTAATTTG...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
3UTR CAA 72 bp CCAGCCATGGCAGAGCCCACTAAATTCTTGTTAATGTaGACCTCAATCATAGCCTCTGTGGTAGTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: PAMAEPTKFLLM*TSIIASVVVFN
Trigger: ATTAAAGACTACCACAGAGGCTATGATTGAGGTCAACATTAACAAGAATTTAGTGGGCTCTGCCATGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAACTTGAGAAAATTGTaGAAAGGCCAGCAATACCCA +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTNLRKL*KGQQYP
Trigger: TGGGTATTGCTGGCCTTTTCACAATTTTCTCAAGTT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAAACTTGAGAAAATTGTaGAAAGGCCAGCAATACCCA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRNLRKL*KGQQYP
Trigger: TGGGTATTGCTGGCCTTTTCACAATTTTCTCAAGTT...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCCTGTGAGTTGGAACTaGGGGCAAACTTTGCTAATG +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQPVSWN*GQTLLM
Trigger: CATTAGCAAAGTTTGCCCTCAGTTCCAACTCACAGG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCCTTACTTCATCCTGTaGGTTGGAACTGAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSPYFIL*VGTEGK
Trigger: TTTGCCCTCAGTTCCAACTCACAGGATGAAGTAAGG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCTGGGAAGAAAGTCATaGACACGAAGTAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDLGRKS*TRSSWQ
Trigger: TTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCCAAAGAAGATGTACTTaGCAGCCAGAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSQRRCT*QPEGEL
Trigger: TAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTG...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCAAAGAAGATGTACTTaGCAGCCAGAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDQRRCT*QPEGEL
Trigger: TAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGGATACACCACGCTCATaGGTTTCCATCAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQDTPRS*VSIRVS
Trigger: GGAAACTCTGATGGAAACTCATGAGCGTGGTGTATC...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTGATACACCACGCTCATaGGTTTCCATCAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFDTPRS*VSIRVS
Trigger: GGAAACTCTGATGGAAACTCATGAGCGTGGTGTATC...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCAACCTTGGCTGGAATaGCAGCTTCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFQPWLE*QLHKQQ
Trigger: CTGTTGTTTGTGAAGCTGTCATTCCAGCCAAGGTTG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCAACCTTGGCTGGAATaGCAGCTTCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQQPWLE*QLHKQQ
Trigger: CTGTTGTTTGTGAAGCTGTCATTCCAGCCAAGGTTG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACATTTGCCTTCAGAGGTaGGCTGTAGATTACCATCTC +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNICLQR*AVDYHL
Trigger: GAGATGGTAATCTACAGCTCACCTCTGAAGGCAAAT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATATTTGCCTTCAGAGGTaGGCTGTAGATTACCATCTC +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDICLQR*AVDYHL
Trigger: GAGATGGTAATCTACAGCTCACCTCTGAAGGCAAAT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTACTGTGTTTCTACAATaGTTTCTAAGGTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSITVFLQ*FLRSQS
Trigger: AGACTGGGACCTTAGAAATCATTGTAGAAACACAGT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCTGSES*LSLSLG
Trigger: GCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGT...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTCCAAGAGCAACACTTaGAGCATTAGATGTAATACA +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLESKSNT*SIRCNT
Trigger: TGTATTACATCTAATGCTTCAAGTGTTGCTCTTGGA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTCCAAGAGCAACACTTaGAGCATTAGATGTAATACA +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLSKSNT*SIRCNT
Trigger: TGTATTACATCTAATGCTTCAAGTGTTGCTCTTGGA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGTCACTGCCACTTCCATaGAAAGCTCAGAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMSLPLP*KAQKKS
Trigger: TGACTTTTTCTGAGCTTTTCATGGAAGTGGCAGTGA...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCTACAGGTTACTACTATaGCCAGACTTTACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGYRLLL*PDFTSF
Trigger: GAAGCTTGTAAAGTCTGGTCATAGTAGTAACCTGTA...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTTTTGCTCTTCAGTGTaGGATGTGCCCCTTAGATTT +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHFCSSV*DVPLRF
Trigger: AAATCTAAGGGGCACATCTCACACTGAAGAGCAAAA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTAGAAAACTCACATCCTaGTGCAAGAGTGCCCATACC +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFRKLTS*CKSAHT
Trigger: GGTATGGGCACTCTTGCATCAGGATGTGAGTTTTCT...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTAGAAAACTCACATCCTaGTGCAAGAGTGCCCATACC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFRKLTS*CKSAHT
Trigger: GGTATGGGCACTCTTGCATCAGGATGTGAGTTTTCT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGATGGGGAGTGGACAGTaGTACATACCCTTAACAGGA +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQMGSGQ*YIPLTG
Trigger: TCCTGTTAAGGGTATGTATCACTGTCCACTCCCCAT...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGCTCCAAATGCTGCAATaGGCATTTTCTTTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLLQMLQ*AFSLSV
Trigger: GACACTCAAAGAAAATGCTCATTGCAGCATTTGGAG...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAAACTTTGCTAATGTaGTTGCTCTGGAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRQTLLM*LLWKGQ
Trigger: TTGACCTTTCCAGAGCAAGCACATTAGCAAAGTTTG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAATCACTAAGGAATTTTaGACCTTTCTCTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRITKEF*TFLCIP
Trigger: GGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGAT...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAATCACTAAGGAATTTTaGACCTTTCTCTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAITKEF*TFLCIP
Trigger: GGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGAT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTCCACCAAGACCTATTaGTCTGCAGCCTCTATTGGT +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSSTKTY*SAASIG
Trigger: ACCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCCAGGCTTTCACTTCTaGAGAGTCACAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVPGFHF*RVTSTW
Trigger: CCACGTGCTTGTGACTCTGCAGAAGTGAAAGCCTGG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGAACGGATATAAAGGTTaGGTCCAGCTATACTTGTAT +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLNGYKG*VQLYLY
Trigger: ATACAAGTATAGCTGGACGCAACCTTTATATCCGTT...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAACGGATATAAAGGTTaGGTCCAGCTATACTTGTAT +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDNGYKG*VQLYLY
Trigger: ATACAAGTATAGCTGGACGCAACCTTTATATCCGTT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCTAACGGCTAGAATCTaGATTTCAGGGAAATACTCG +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHLTARI*ISGKYS
Trigger: CGAGTATTTCCCTGAAATGCAGATTCTAGCCGTTAG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTGGTGACAATGTTTGCTaGATGGGCGTTGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVGDNVC*MGVVAS
Trigger: GGAGGCTACAACGCCCATGCAGCAAACATTGTCACC...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTA +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNPQDYL*MLLEHL
Trigger: TAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTA +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSPQDYL*MLLEHL
Trigger: TAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGG...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATTTTGACAAGATGTCCTaGTGCCAATGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDFDKMS*CQCCHK
Trigger: CTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTTTGACAAGATGTCCTaGTGCCAATGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNFDKMS*CQCCHK
Trigger: CTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTCTGAACAAATAGCCTaGGGAGATAAATACAGTGAT +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLSEQIA*GDKYSD
Trigger: ATCACTGTATTTATCTCCGCAGGCTATTTGTTCAGA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCTAAGGTCCCAGTCTTaGTTGTACTTGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFLRSQS*LYLTVT
Trigger: GGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCAACATATTTTTCACTaGCACTTCCATGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEQHIFH*HFHEKL
Trigger: GAGCTTTTCATGGAAGTGGCAGTGAAAAATATGTTG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCAACATATTTTTCACTaGCACTTCCATGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLQHIFH*HFHEKL
Trigger: GAGCTTTTCATGGAAGTGGCAGTGAAAAATATGTTG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATTCTCTCTCTCTTGTGTaGGACATCCATTGCATACTG +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDSLSLV*DIHCIL
Trigger: CAGTATGCAATGGATGTCGCACACAAGAGAGAGAGA...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGCACAGCTTAAATGCTTaGAATGGCTGTTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMHSLNA*NGCLVV
Trigger: CACAACCAAACAGCCATTGCAAGCATTTAAGCTGTG...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCTCACACAGCTTAAATaGTTGCAATGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFLTQLK*LQWLFG
Trigger: ACCAAACAGCCATTGCAAGCATTTAAGCTGTGTGAG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGCTTCAGTGTGAGATGTaGCCCTTAGATTTAATCCTG +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLLQCEM*PLDLIL
Trigger: CAGGATTAAATCTAAGGGGCACATCTCACACTGAAG...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTATTAAAGCCATCTTTTaGATTCAGCCTCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIIKAIF*IQPPNS
Trigger: GGAGTTAGGAGGCTGAATGCAAAAGATGGCTTTAAT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTGACGTACCCCTGACATaGTACCAACTCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCDVPLT*YQLQSQ
Trigger: TTGTGATTGGAGTTGGTACCATGTCAGGGGTACGTC...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCAGACGTACCCCTGACATaGTACCAACTCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSDVPLT*YQLQSQ
Trigger: TTGTGATTGGAGTTGGTACCATGTCAGGGGTACGTC...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACAAAACTCGGGCAAAATaGCTGAGCTGCCAAATTGGA +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNKTRAK*LSCQIG
Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATAAAACTCGGGCAAAATaGCTGAGCTGCCAAATTGGA +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDKTRAK*LSCQIG
Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCAAAACTCGGGCAAAATaGCTGAGCTGCCAAATTGGA +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSKTRAK*LSCQIG
Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTT...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAATTGGTTCAATTCTCTTaGACACATTTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKLVQFS*THFHPV
Trigger: GACTGGATGAAAATGTGTCCAAGAGAATTGAACCAA...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCTTGGTTCAATTCTCTTaGACACATTTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVLVQFS*THFHPV
Trigger: GACTGGATGAAAATGTGTCCAAGAGAATTGAACCAA...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGAAATGTAGCTCTGTTTaGGGTATCTGTTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMKCSSV*GICFSH
Trigger: GTGGCTGAAACAGATACCCCAAACAGAGCTACATTT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATAAATGTAGCTCTGTTTaGGGTATCTGTTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHKCSSV*GICFSH
Trigger: GTGGCTGAAACAGATACCCCAAACAGAGCTACATTT...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTTCCAACTTGTAGGCTaGGATATGCTTAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHFQLVG*DMLSID
Trigger: GTCAATGCTAAGCATATCCCAGCCTACAAGTTGGAA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATGTTCTGAAAGCTTCTTaGAAAGTAACTGTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHVLKAS*KVTVGE
Trigger: TTCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAAC...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTGGCATCCCCTGACCTaGACTGGAAACGGATATAAA +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFWHPLT*TGNGYK
Trigger: TTTATATCCGTTTCCAGTCCAGGTCAGGGGATGCCA...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTCTGACAACCTTGGCTaGAATGACAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNSDNLG*NDSFTN
Trigger: GTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGTTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGTCTGAGGAGTCTGCATaGAAAGAACCTGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQSEESA*KEPETS
Trigger: AGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGA...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAGAACATTATCTTCTCTaGCCCAGGCTAGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAEHYLL*PRLEYF
Trigger: AAAATACTCTAGCCTGGGCCAGAGAAGATAATGTTC...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGAACATTATCTTCTCTaGCCCAGGCTAGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTREHYLL*PRLEYF
Trigger: AAAATACTCTAGCCTGGGCCAGAGAAGATAATGTTC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCGCTGCCATGGTTTCCTaGAATGTTTTTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSAAMVS*NVFQSP
Trigger: TGGACTCTGAAAAACATTCCAGGAAACCATGGCAGC...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCCACATGCAGTATGTaGCATACTACTTCCTATTAT +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRPTCSM*HTTSYY
Trigger: ATAATAGGAAGTAGTATGCCACATACTGCATGTGGG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCTAGTATCTGGGCCTTaGTTCTTTCTTAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNLVSGP*FFLSAH
Trigger: GTGAGCACTAAGAAAGAACCAAGGCCCAGATACTAG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCAAACTTGCTCAGGATaGAAAACAAGCGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFQTCSG*KTSGRD
Trigger: ATCCCTGCCGCTTGTTTTCCATCCTGAGCAAGTTTG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGTCAGAATTAGCCAACTaGAATGCTGTTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQSELAN*NAVAWV
Trigger: GACCCAGGCAACAGCATTCCAGTTGGCTAATTCTGA...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CAA 72 bp AACTGTGTTTCTACAATGATTTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCACCCTCATCTAAGCAAC +
Preference number: 4 (lower is better)
Translates to: NCVSTMISKVPV*LVLDSHPHLSN
Trigger: GTTGCTTAGATGAGGGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGAAATCATTGTAGAAACACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CAA 72 bp GCCTCTGTGGTAGTCTTTAATACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCACAAACAACAGATTTT +
Preference number: 4 (lower is better)
Translates to: ASVVVFNTSLTT*AGMTASQTTDF
Trigger: AAAATCTGTTGTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGTATTAAAGACTACCACAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACATTCGAAAAAGTCTTaGCAACATTGTAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRHSKKS*QHCSYR
Trigger: TCTGTAGCTACAATGTTGTCAAGACTTTTTCGAATG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATATTTTGATCCAAGTTaGCGTAAATTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTYFDPS*RKFWNW
Trigger: CCAGTTCCAGAATTTACGTCAACTTGGATCAAAATA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATATTTTGATCCAAGTTaGCGTAAATTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRYFDPS*RKFWNW
Trigger: CCAGTTCCAGAATTTACGTCAACTTGGATCAAAATA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTAACTTGAGAAAATTGTaGAAAGGCCAGCAATACCCA +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFNLRKL*KGQQYP
Trigger: TGGGTATTGCTGGCCTTTTCACAATTTTCTCAAGTT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCACATAATTTCAAGCTaGCGTACCCCTGACATGGTA +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSHIISS*RTPDMV
Trigger: TACCATGTCAGGGGTACGTCAGCTTGAAATTATGTG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCTGGGAAGAAAGTCATaGACACGAAGTAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSLGRKS*TRSSWQ
Trigger: TTGCCAACTACTTCGTGTTCATGACTTTCTTCCCAG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFIILTL*VTGFGL
Trigger: TAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGAT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTCTGCTGTACTGTTTTaGGGAGAAGGATCAGCTATC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFSAVLF*GEGSAI
Trigger: GATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGA...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTCTGCTGTACTGTTTTaGGGAGAAGGATCAGCTATC +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSSAVLF*GEGSAI
Trigger: GATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCAAAGAAGATGTACTTaGCAGCCAGAAGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCQRRCT*QPEGEL
Trigger: TAGCTCTCCTTCTGGCTGTCAAGTACATCTTCTTTG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTCTCTGTACCCTTTaGAATCATGTTCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFFLCTL*NHVHPH
Trigger: ATGGGGATGAACATGATTTCAAAGGGTACAGAGAAA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGATACTCGTGAAGTTTTaGAAGTGCTTTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMILVKF*KCFLCT
Trigger: GGTACAGAGAAAGCACTTTCAAAACTTCACGAGTAT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGATACTCGTGAAGTTTTaGAAGTGCTTTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLILVKF*KCFLCT
Trigger: GGTACAGAGAAAGCACTTTCAAAACTTCACGAGTAT...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTAACCTGAGACCTCTCTaGAAGAGCCAAAAACCAAGT +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCNLRPL*KSQKPS
Trigger: ACTTGGTTTTTGGCTCTTTCAGAGAGGTCTCAGGTT...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTAGCTCTTACTTCTTaGAGTTCTACATCCCAGACT +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFLALTS*SSTSQT
Trigger: AGTCTGGGATGTAGAACTTCAAGAAGTAAGAGCTAA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTTAGCTCTTACTTCTTaGAGTTCTACATCCCAGACT +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHLALTS*SSTSQT
Trigger: AGTCTGGGATGTAGAACTTCAAGAAGTAAGAGCTAA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCAATGGCTCCAAGAGCAACACTTaGAGCATTAGATGTAATACA +
Preference number: 4 (lower is better)
Translates to: CTNSPLQFSSHSLNACNGSKSNT*SIRCNT
Trigger: TGTATTACATCTAATGCTTCAAGTGTTGCTCTTGGA...GCCATTGCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTCACTGCCACTTCCATaGAAAGCTCAGAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNSLPLP*KAQKKS
Trigger: TGACTTTTTCTGAGCTTTTCATGGAAGTGGCAGTGA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTCTTTGCATGCTCCTTaGACACCTAGCATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCSLHAP*TPSISL
Trigger: CAGAGAAATGCTAGGTGTTCAAGGAGCATGCAAAGA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511986.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGTACAGGTTACTACTATaGCCAGACTTTACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMYRLLL*PDFTSF
Trigger: GAAGCTTGTAAAGTCTGGTCATAGTAGTAACCTGTA...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCATCCTGTATCGTCTCCTaGAATCAAACATCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSSCIVS*NQTSCP
Trigger: AGGACAGGATGTTTGATTTCAGGAGACGATACAGGA...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCTTTTGCTCTTCAGTGTaGGATGTGCCCCTTAGATTT +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSFCSSV*DVPLRF
Trigger: AAATCTAAGGGGCACATCTCACACTGAAGAGCAAAA...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTGCCACAAAGAGGCCATaGATTCGAAAAAGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFATKRP*IRKSLD
Trigger: GTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGC...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTGCCACAAAGAGGCCATaGATTCGAAAAAGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSATKRP*IRKSLD
Trigger: GTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGC...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTGTTCATGGACATCATaGAGATGGTCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSCSWTS*RWSVSL
Trigger: CAGTGACACTGACCATCTGCATGATGTCCATGAACA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATATACAGGATGGCTATaGATCGTGTTATTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAYTGWL*IVLLSE
Trigger: TTCTGACAATAACACGATGCATAGCCATCCTGTATA...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTATACAGGATGGCTATaGATCGTGTTATTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIYTGWL*IVLLSE
Trigger: TTCTGACAATAACACGATGCATAGCCATCCTGTATA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATATACAGGATGGCTATaGATCGTGTTATTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTYTGWL*IVLLSE
Trigger: TTCTGACAATAACACGATGCATAGCCATCCTGTATA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGCAAACTTTGCTAATGTaGTTGCTCTGGAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: EMCPLDLILYRLLKSNILQTLLM*LLWKGQ
Trigger: TTGACCTTTCCAGAGCAAGCACATTAGCAAAGTTTG...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTATCACTAAGGAATTTTaGACCTTTCTCTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFITKEF*TFLCIP
Trigger: GGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGAT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTGCTAGTGCTGTCAAATaGCTCCTTTATCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFASAVK*LLYHCE
Trigger: TTCGCAGTGATAAAGGAGGCATTTGACAGCACTAGC...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTGCTAGTGCTGTCAAATaGCTCCTTTATCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFASAVK*LLYHCE
Trigger: TTCGCAGTGATAAAGGAGGCATTTGACAGCACTAGC...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGGCTAGTGCTGTCAAATaGCTCCTTTATCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQASAVK*LLYHCE
Trigger: TTCGCAGTGATAAAGGAGGCATTTGACAGCACTAGC...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCTAACGGCTAGAATCTaGATTTCAGGGAAATACTCG +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNLTARI*ISGKYS
Trigger: CGAGTATTTCCCTGAAATGCAGATTCTAGCCGTTAG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTACTACCAACATTCTGTaGTGCATCCTGTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVTTNIL*CILSTG
Trigger: GCCTGTGGACAGGATGCAGCACAGAATGTTGGTAGT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCPQDYL*MLLEHL
Trigger: TAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTA +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFPQDYL*MLLEHL
Trigger: TAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGG...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGTTTGACAAGATGTCCTaGTGCCAATGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQFDKMS*CQCCHK
Trigger: CTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTAGGCTGTCTTCTTGGTaGAAGCTCCTTGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVRLSSW*KLLGGL
Trigger: AAGACCTCCAAGGAGCTTGCACCAAGAAGACAGCCT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCTCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATCTGAACAAATAGCCTaGGGAGATAAATACAGTGAT +
Preference number: 4 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRSEQIA*GDKYSD
Trigger: ATCACTGTATTTATCTCCGCAGGCTATTTGTTCAGA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCAACATATTTTTCACTaGCACTTCCATGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: DLSERAKNQVAVSVITSIQHIFH*HFHEKL
Trigger: GAGCTTTTCATGGAAGTGGCAGTGAAAAATATGTTG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACACAACATATTTTTCACTaGCACTTCCATGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTQHIFH*HFHEKL
Trigger: GAGCTTTTCATGGAAGTGGCAGTGAAAAATATGTTG...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTATTCTCTCTGAAATGTaGCTCTCCTGCGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCILSEM*LSCVFC
Trigger: ACAGAAGACGCAGGAGAGGCACATTTCAGAGAGAAT...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTTCAAACATCCTGTCCTaGCACATGCATCTCATTGCT +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFSNILS*HMHLIA
Trigger: AGCAATGAGATGCATGTGGCAGGACAGGATGTTTGA...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCATCAAACATCCTGTCCTaGCACATGCATCTCATTGCT +
Preference number: 4 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSSNILS*HMHLIA
Trigger: AGCAATGAGATGCATGTGGCAGGACAGGATGTTTGA...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGATTAAAGCCATCTTTTaGATTCAGCCTCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMIKAIF*IQPPNS
Trigger: GGAGTTAGGAGGCTGAATGCAAAAGATGGCTTTAAT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTATTAAAGCCATCTTTTaGATTCAGCCTCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFIKAIF*IQPPNS
Trigger: GGAGTTAGGAGGCTGAATGCAAAAGATGGCTTTAAT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCAATTAGCCAACTGGAATaGTGTTGCCTGGGTCTAATC +
Preference number: 4 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSISQLE*CCLGLI
Trigger: GATTAGACCCAGGCAACAGCATTCCAGTTGGCTAAT...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGATTAGCCAACTGGAATaGTGTTGCCTGGGTCTAATC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQISQLE*CCLGLI
Trigger: GATTAGACCCAGGCAACAGCATTCCAGTTGGCTAAT...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACATCCTCTTCAAACTTTaGACATTCATAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDILFKL*TFIIPT
Trigger: GGTTGGAATTATGAATGTCCAAAGTTTGAAGAGGAT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAAGTAAATATACAGGATaGCTATGCATCGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: RSEESAWKEPETSLKEPKSKYTG*LCIVLL
Trigger: CAATAACACGATGCATAGCCATCCTGTATATTTACT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTAAAACTCGGGCAAAATaGCTGAGCTGCCAAATTGGA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCKTRAK*LSCQIG
Trigger: TCCAATTTGGCAGCTCAGCCATTTTGCCCGAGTTTT...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATAAATGTAGCTCTGTTTaGGGTATCTGTTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDKCSSV*GICFSH
Trigger: GTGGCTGAAACAGATACCCCAAACAGAGCTACATTT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATTTCCAACTTGTAGGCTaGGATATGCTTAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDFQLVG*DMLSID
Trigger: GTCAATGCTAAGCATATCCCAGCCTACAAGTTGGAA...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATGTTCTGAAAGCTTCTTaGAAAGTAACTGTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDVLKAS*KVTVGE
Trigger: TTCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAAC...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTAGCCTCTATTGGTGCTaGCCACAAGACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVSLYWC*PQDNLL
Trigger: CAGAAGGTTGTCTTGTGGCCAGCACCAATAGAGGCT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTCTGACAACCTTGGCTaGAATGACAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSSDNLG*NDSFTN
Trigger: GTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTCTGACAACCTTGGCTaGAATGACAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCSDNLG*NDSFTN
Trigger: GTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTGCTGCCATGGTTTCCTaGAATGTTTTTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFAAMVS*NVFQSP
Trigger: TGGACTCTGAAAAACATTCCAGGAAACCATGGCAGC...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCTCTCCATGCTGCCATaGTTTCCTGGAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCLSMLP*FPGMFF
Trigger: GAAAAACATTCCAGGAAACCATGGCAGCATGGAGAG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCTTAAATGCTTGCAATaGCTGTTTGGTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFLKCLQ*LFGCGC
Trigger: GCAGCCACAACCAAACAGCCATTGCAAGCATTTAAG...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCTAGTATCTGGGCCTTaGTTCTTTCTTAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFLVSGP*FFLSAH
Trigger: GTGAGCACTAAGAAAGAACCAAGGCCCAGATACTAG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTTGTATGCTTAGCAGCTaGCACAAGGCCCTCCTACTT +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVCMLSS*HKALLL
Trigger: AAGTAGGAGGGCCTTGTGCCAGCTGCTAAGCATACA...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCATTCGAAAAAGTCTTaGCAACATTGTAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHHSKKS*QHCSYR
Trigger: TCTGTAGCTACAATGTTGTCAAGACTTTTTCGAATG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGTATTTTGATCCAAGTTaGCGTAAATTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMYFDPS*RKFWNW
Trigger: CCAGTTCCAGAATTTACGTCAACTTGGATCAAAATA...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCCAGCTATACTTGTATaGAGTTTCTGTAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCPAILV*SFCRRA
Trigger: TGCACGTCTACAGAAACTTCATACAAGTATAGCTGG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAATGCTGCCATAAGTaGCAATTCCCCAGCCATTAC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVQCCHK*QFPSHY
Trigger: GTAATGGCTGGGGAATTGTCACTTATGGCAGCATTG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTAAACAGGTCCCCTTCTaGAGAATAATGCTGATTACC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCKQVPF*RIMLIT
Trigger: GGTAATCAGCATTATTCTTCAGAAGGGGACCTGTTT...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATACTGTGTTTCTACAATaGTTTCTAAGGTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDTVFLQ*FLRSQS
Trigger: AGACTGGGACCTTAGAAATCATTGTAGAAACACAGT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCACTGTGTTTCTACAATaGTTTCTAAGGTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSTVFLQ*FLRSQS
Trigger: AGACTGGGACCTTAGAAATCATTGTAGAAACACAGT...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTACTGGCTCTGAAAGCTaGCTTTCCCTTTCATTAGGC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVTGSES*LSLSLG
Trigger: GCCTAATGAAAGGGAAAGTCAGCTTTCAGAGCCAGT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATTCCAAGAGCAACACTTaGAGCATTAGATGTAATACA +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHSKSNT*SIRCNT
Trigger: TGTATTACATCTAATGCTTCAAGTGTTGCTCTTGGA...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTCACTGCCACTTCCATaGAAAGCTCAGAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCSLPLP*KAQKKS
Trigger: TGACTTTTTCTGAGCTTTTCATGGAAGTGGCAGTGA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTATACTGGATTCTCTCTaGAATGTGCCTCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVILDSL*NVPLLR
Trigger: ACGCAGGAGAGGCACATTTCAGAGAGAATCCAGTAT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR TCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCCCAAGCACACCAAAATaGAAAAAGCAATCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSPSTPK*KKQSVK
Trigger: CTTAACGGATTGCTTTTTTCATTTTGGTGTGCTTGG...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGTATACAGGATGGCTATaGATCGTGTTATTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMYTGWL*IVLLSE
Trigger: TTCTGACAATAACACGATGCATAGCCATCCTGTATA...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCAAACTTTGCTAATGTaGTTGCTCTGGAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNQTLLM*LLWKGQ
Trigger: TTGACCTTTCCAGAGCAAGCACATTAGCAAAGTTTG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATAACGGATATAAAGGTTaGGTCCAGCTATACTTGTAT +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHNGYKG*VQLYLY
Trigger: ATACAAGTATAGCTGGACGCAACCTTTATATCCGTT...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCTAACGGCTAGAATCTaGATTTCAGGGAAATACTCG +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFLTARI*ISGKYS
Trigger: CGAGTATTTCCCTGAAATGCAGATTCTAGCCGTTAG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCTAACGGCTAGAATCTaGATTTCAGGGAAATACTCG +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSLTARI*ISGKYS
Trigger: CGAGTATTTCCCTGAAATGCAGATTCTAGCCGTTAG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCATCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTCTGAACAAATAGCCTaGGGAGATAAATACAGTGAT +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFSEQIA*GDKYSD
Trigger: ATCACTGTATTTATCTCCGCAGGCTATTTGTTCAGA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCTAAGGTCCCAGTCTTaGTTGTACTTGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVLRSQS*LYLTVT
Trigger: GGTGACTGTCAAGTACAAGCAAGACTGGGACCTTAG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGCAACATATTTTTCACTaGCACTTCCATGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LALPLSLSKRCLVEMINLQHIFH*HFHEKL
Trigger: GAGCTTTTCATGGAAGTGGCAGTGAAAAATATGTTG...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCTCACACAGCTTAAATaGTTGCAATGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSLTQLK*LQWLFG
Trigger: ACCAAACAGCCATTGCAAGCATTTAAGCTGTGTGAG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCTTCAGTGTGAGATGTaGCCCTTAGATTTAATCCTG +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCLQCEM*PLDLIL
Trigger: CAGGATTAAATCTAAGGGGCACATCTCACACTGAAG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCTTCAGTGTGAGATGTaGCCCTTAGATTTAATCCTG +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFLQCEM*PLDLIL
Trigger: CAGGATTAAATCTAAGGGGCACATCTCACACTGAAG...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACATTAAAGCCATCTTTTaGATTCAGCCTCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNIKAIF*IQPPNS
Trigger: GGAGTTAGGAGGCTGAATGCAAAAGATGGCTTTAAT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCTACTTTTATGCTCCCTaGCAACTGGCTTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: FLECFSESIFYKRHHQLSYFYAP*QLASEL
Trigger: TAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAGTA...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGTAAATATACAGGATaGCTATGCATCGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTSKYTG*LCIVLL
Trigger: CAATAACACGATGCATAGCCATCCTGTATATTTACT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAAGTAAATATACAGGATaGCTATGCATCGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: NQVAVSVITSIHPPQDNASKYTG*LCIVLL
Trigger: CAATAACACGATGCATAGCCATCCTGTATATTTACT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTGGTTCAATTCTCTTaGACACATTTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFLVQFS*THFHPV
Trigger: GACTGGATGAAAATGTGTCCAAGAGAATTGAACCAA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGTTGGTTCAATTCTCTTaGACACATTTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: EMCPLDLILYRLLKSNILLVQFS*THFHPV
Trigger: GACTGGATGAAAATGTGTCCAAGAGAATTGAACCAA...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAAATGTAGCTCTGTTTaGGGTATCTGTTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQKCSSV*GICFSH
Trigger: GTGGCTGAAACAGATACCCCAAACAGAGCTACATTT...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTAAATGTAGCTCTGTTTaGGGTATCTGTTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFKCSSV*GICFSH
Trigger: GTGGCTGAAACAGATACCCCAAACAGAGCTACATTT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCATTCCAACTTGTAGGCTaGGATATGCTTAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSFQLVG*DMLSID
Trigger: GTCAATGCTAAGCATATCCCAGCCTACAAGTTGGAA...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTGTTCTGAAAGCTTCTTaGAAAGTAACTGTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFVLKAS*KVTVGE
Trigger: TTCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAAC...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGGTTCTGAAAGCTTCTTaGAAAGTAACTGTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQVLKAS*KVTVGE
Trigger: TTCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAAC...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGTTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTTGGTGCAAGCTCCTTaGAGGTCTTGTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCLVQAP*RSCKLI
Trigger: GATCAATTTACAAGACCTCCAAGGAGCTTGCACCAA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATGAACATTATCTTCTCTaGCCCAGGCTAGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDEHYLL*PRLEYF
Trigger: AAAATACTCTAGCCTGGGCCAGAGAAGATAATGTTC...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCAAGCCAGGGTTTCCTaGACAACATTAAAGAACATT +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNQARVS*TTLKNI
Trigger: AATGTTCTTTAATGTTGTCCAGGAAACCCTGGCTTG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CAA 72 bp TTATTTCTGACCAGCATAGGTTCACGTCTACAACAATaGTCTGGGACTTTCTTTTGTGTCACTACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LFLTSIGSRLQQ*SGTFFCVTTGD
Trigger: ATCTCCTGTAGTGACACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGAACCTATGCTGGTCAGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCATTCGAAAAAGTCTTaGCAACATTGTAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDHSKKS*QHCSYR
Trigger: TCTGTAGCTACAATGTTGTCAAGACTTTTTCGAATG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTATCATCTTGACCCTCTaGGTTACAGGATTCGGCTTA +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVIILTL*VTGFGL
Trigger: TAAGCCGAATCCTGTAACTCAGAGGGTCAAGATGAT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTTTCTCTGTACCCTTTaGAATCATGTTCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSFLCTL*NHVHPH
Trigger: ATGGGGATGAACATGATTTCAAAGGGTACAGAGAAA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTTTCTCTGTACCCTTTaGAATCATGTTCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFFLCTL*NHVHPH
Trigger: ATGGGGATGAACATGATTTCAAAGGGTACAGAGAAA...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTTTTCTCTGTACCCTTTaGAATCATGTTCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFFLCTL*NHVHPH
Trigger: ATGGGGATGAACATGATTTCAAAGGGTACAGAGAAA...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTATACTCGTGAAGTTTTaGAAGTGCTTTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFILVKF*KCFLCT
Trigger: GGTACAGAGAAAGCACTTTCAAAACTTCACGAGTAT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTAAGTGGCTGTCTCAGTaGTCACATCTATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVKWLSQ*SHLFIL
Trigger: GAGGATGAATAGATGTGATCACTGAGACAGCCACTT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTAACTGTGTTCAGATCTaGGGAGTCTGCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVNCVQI*GVCMER
Trigger: TCTTTCCATGCAGACTCCTCAGATCTGAACACAGTT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTTTAGCTCTTACTTCTTaGAGTTCTACATCCCAGACT +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFLALTS*SSTSQT
Trigger: AGTCTGGGATGTAGAACTTCAAGAAGTAAGAGCTAA...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTACTGTGTTTCTACAATaGTTTCTAAGGTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFTVFLQ*FLRSQS
Trigger: AGACTGGGACCTTAGAAATCATTGTAGAAACACAGT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTCCAAGAGCAACACTTaGAGCATTAGATGTAATACA +
Preference number: 4 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNSKSNT*SIRCNT
Trigger: TGTATTACATCTAATGCTTCAAGTGTTGCTCTTGGA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCCAAGCACACCAAAATaGAAAAAGCAATCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFPSTPK*KKQSVK
Trigger: CTTAACGGATTGCTTTTTTCATTTTGGTGTGCTTGG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCCAGGCACCTCATACTaGAATTCCAACCTATTAGTG +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVPGTSY*NSNLLV
Trigger: CACTAATAGGTTGGAATTTCAGTATGAGGTGCCTGG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTGCCACAAAGAGGCCATaGATTCGAAAAAGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVATKRP*IRKSLD
Trigger: GTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGC...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTTGTTCATGGACATCATaGAGATGGTCAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVCSWTS*RWSVSL
Trigger: CAGTGACACTGACCATCTGCATGATGTCCATGAACA...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTATCACTAAGGAATTTTaGACCTTTCTCTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCITKEF*TFLCIP
Trigger: GGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGAT...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTA +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVPQDYL*MLLEHL
Trigger: TAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTTTTGACAAGATGTCCTaGTGCCAATGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVFDKMS*CQCCHK
Trigger: CTTATGGCAGCATTGGCAGCAGGACATCTTGTCAAA...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTACTACTTCCTATTATaGCATAGACCCAAATCAGCG +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCYYFLL*HRPKSA
Trigger: CGCTGATTTGGGTCTATGGCATAATAGGAAGTAGTA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR GCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTACTTTTATGCTCCCTaGCAACTGGCTTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSYFYAP*QLASEL
Trigger: TAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAGTA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTTACTTTTATGCTCCCTaGCAACTGGCTTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFYFYAP*QLASEL
Trigger: TAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAGTA...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTATCCTCTTCAAACTTTaGACATTCATAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: AVSVITSIHPPQDNALSFILFKL*TFIIPT
Trigger: GGTTGGAATTATGAATGTCCAAAGTTTGAAGAGGAT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATAGTAAATATACAGGATaGCTATGCATCGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: LSERAKNQVAVSVITSIHSKYTG*LCIVLL
Trigger: CAATAACACGATGCATAGCCATCCTGTATATTTACT...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTTCTGACAACCTTGGCTaGAATGACAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVSDNLG*NDSFTN
Trigger: GTTTGTGAAGCTGTCATTCCAGCCAAGGTTGTCAGA...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTGAACATTATCTTCTCTaGCCCAGGCTAGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFEHYLL*PRLEYF
Trigger: AAAATACTCTAGCCTGGGCCAGAGAAGATAATGTTC...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCAAGCCAGGGTTTCCTaGACAACATTAAAGAACATT +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFQARVS*TTLKNI
Trigger: AATGTTCTTTAATGTTGTCCAGGAAACCCTGGCTTG...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCTCTCCATGCTGCCATaGTTTCCTGGAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVLSMLP*FPGMFF
Trigger: GAAAAACATTCCAGGAAACCATGGCAGCATGGAGAG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCATTCGAAAAAGTCTTaGCAACATTGTAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCHSKKS*QHCSYR
Trigger: TCTGTAGCTACAATGTTGTCAAGACTTTTTCGAATG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTATTTTGATCCAAGTTaGCGTAAATTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFYFDPS*RKFWNW
Trigger: CCAGTTCCAGAATTTACGTCAACTTGGATCAAAATA...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTTATTTTGATCCAAGTTaGCGTAAATTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSYFDPS*RKFWNW
Trigger: CCAGTTCCAGAATTTACGTCAACTTGGATCAAAATA...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCCAGCTATACTTGTATaGAGTTTCTGTAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVPAILV*SFCRRA
Trigger: TGCACGTCTACAGAAACTTCATACAAGTATAGCTGG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTGGAGGTCTTGTAAATTaGTCTTCGACCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVGGLVN*SSTCCE
Trigger: TTCACAACAGGTCGAAGATCAATTTACAAGACCTCC...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTATACAGGATGGCTATaGATCGTGTTATTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCYTGWL*IVLLSE
Trigger: TTCTGACAATAACACGATGCATAGCCATCCTGTATA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCTAACGGCTAGAATCTaGATTTCAGGGAAATACTCG +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVLTARI*ISGKYS
Trigger: CGAGTATTTCCCTGAAATGCAGATTCTAGCCGTTAG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTTCCTTTAGAACCCAATaGCCATGTTCCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVSFRTQ*PCSSSE
Trigger: TTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGA...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTAGGGAGAAGGTCAATTaGACTGATCACCATGAACTT +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVREKVN*TDHHEL
Trigger: AAGTTCATGGTGATCAGTGCAATTGACCTTCTCCCT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTCTGAACAAATAGCCTaGGGAGATAAATACAGTGAT +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCSEQIA*GDKYSD
Trigger: ATCACTGTATTTATCTCCGCAGGCTATTTGTTCAGA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCAACATATTTTTCACTaGCACTTCCATGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFQHIFH*HFHEKL
Trigger: GAGCTTTTCATGGAAGTGGCAGTGAAAAATATGTTG...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATATCCTCTTCAAACTTTaGACATTCATAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDILFKL*TFIIPT
Trigger: GGTTGGAATTATGAATGTCCAAAGTTTGAAGAGGAT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATAGTAAATATACAGGATaGCTATGCATCGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDSKYTG*LCIVLL
Trigger: CAATAACACGATGCATAGCCATCCTGTATATTTACT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTTGGTTCAATTCTCTTaGACACATTTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCLVQFS*THFHPV
Trigger: GACTGGATGAAAATGTGTCCAAGAGAATTGAACCAA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGTTGGTTCAATTCTCTTaGACACATTTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQLVQFS*THFHPV
Trigger: GACTGGATGAAAATGTGTCCAAGAGAATTGAACCAA...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTTTTCTCTGTACCCTTTaGAATCATGTTCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVFLCTL*NHVHPH
Trigger: ATGGGGATGAACATGATTTCAAAGGGTACAGAGAAA...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTACTGTGTTTCTACAATaGTTTCTAAGGTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVTVFLQ*FLRSQS
Trigger: AGACTGGGACCTTAGAAATCATTGTAGAAACACAGT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAAACTTTGCTAATGTaGTTGCTCTGGAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVQTLLM*LLWKGQ
Trigger: TTGACCTTTCCAGAGCAAGCACATTAGCAAAGTTTG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTATCACTAAGGAATTTTaGACCTTTCTCTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVITKEF*TFLCIP
Trigger: GGGAATGCAGAGAAAGGTGCAAAATTCCTTAGTGAT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTATCCTCTTCAAACTTTaGACATTCATAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFILFKL*TFIIPT
Trigger: GGTTGGAATTATGAATGTCCAAAGTTTGAAGAGGAT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTATCCTCTTCAAACTTTaGACATTCATAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCILFKL*TFIIPT
Trigger: GGTTGGAATTATGAATGTCCAAAGTTTGAAGAGGAT...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCAATCCTCTTCAAACTTTaGACATTCATAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSILFKL*TFIIPT
Trigger: GGTTGGAATTATGAATGTCCAAAGTTTGAAGAGGAT...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTAGTAAATATACAGGATaGCTATGCATCGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCSKYTG*LCIVLL
Trigger: CAATAACACGATGCATAGCCATCCTGTATATTTACT...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAGTAAATATACAGGATaGCTATGCATCGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQSKYTG*LCIVLL
Trigger: CAATAACACGATGCATAGCCATCCTGTATATTTACT...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR TCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTTATTTTGATCCAAGTTaGCGTAAATTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVYFDPS*RKFWNW
Trigger: CCAGTTCCAGAATTTACGTCAACTTGGATCAAAATA...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTTATACAGGATGGCTATaGATCGTGTTATTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVYTGWL*IVLLSE
Trigger: TTCTGACAATAACACGATGCATAGCCATCCTGTATA...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR GCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTAACGGATATAAAGGTTaGGTCCAGCTATACTTGTAT +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVNGYKG*VQLYLY
Trigger: ATACAAGTATAGCTGGACGCAACCTTTATATCCGTT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
3UTR CAA 72 bp TCTCTCGGCTTCCAGTGTAGAGGTTACCCATTATTTTaGCTAACTGGCAAAGTAATTAATAAATTCAAGACT +
Preference number: 4 (lower is better)
Translates to: SLGFQCRGYPLF*LTGKVINKFKT
Trigger: AGTCTTGAATTTATTAATTACTTTGCCAGTTAGCAAAAATAATGGGTAACCTCTACACTGGAAGCCGAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CCA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTATCCTCTTCAAACTTTaGACATTCATAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVILFKL*TFIIPT
Trigger: GGTTGGAATTATGAATGTCCAAAGTTTGAAGAGGAT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS TCA 90 bp GCCCGCCTCTCAAGCCCACCCCGGGACCCCGGGTTACTCCGGCACTaGTGCCGGCCGCCGCTCGGCCTGCCGGGCCTCAAGGACATTCCT +
Preference number: 5 (lower is better)
Translates to: ARLSSPPRDPGLLRH*CRPPLGLPGLKDIP
Trigger: AGGAATGTCCTTGAGGCCCGGCAGGCCGAGCGGCGGCCGGCATCAGTGCCGGAGTAACCCGGGGTCCCGGGGTGGGCTTGAGAGGCGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS GCA 90 bp GGGACCCCGGGTTACTCCGGCACTGATGCCGGCCGCCGCTCGGCCTaGCGGGCCTCAAGGACATTCCTTGCAGTCCCCGCGGGTCCGAGC +
Preference number: 5 (lower is better)
Translates to: GTPGYSGTDAGRRSA*RASRTFLAVPAGPS
Trigger: GCTCGGACCCGCGGGGACTGCAAGGAATGTCCTTGAGGCCCGGCAGGCCGAGCGGCGGCCGGCATCAGTGCCGGAGTAACCCGGGGTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS GCA 90 bp TGCCGGGCCTCAAGGACATTCCTTGCAGTCCCCGCGGGTCCGAGCTaGCACACCGACAAAGCGCAACCGCAGCCCCCTCCAGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: CRASRTFLAVPAGPS*HTDKAQPQPPPGPQ
Trigger: CTGCGGACCTGGAGGGGGCTGCGGTTGCGCTTTGTCGGTGTGGCAGCTCGGACCCGCGGGGACTGCAAGGAATGTCCTTGAGGCCCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS CCA 90 bp CAGATCTCACTAGAGGCCACCGAACCCCGGCGCCGACGCTCAGCCTaGCTCCAGTTAACGCAGTCGCGGAGCGGAAGGAGCCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: QISLEATEPRRRRSA*LQLTQSRSGRSPHL
Trigger: AAGGTGAGGGCTCCTTCCGCTCCGCGACTGCGTTAACTGGAGCCAGGCTGAGCGTCGGCGCCGGGGTTCGGTGGCCTCTAGTGAGATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679456.1
ENST00000680160.1
CDS GCA 90 bp ACAAGCACGTGGAAGACGCACAACTGGGCCACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGCACCTCCACCAAGCAAGGAGTAATT +
Preference number: 5 (lower is better)
Translates to: TSTWKTHNWATSHPI*KDSAAGTSTKQGVI
Trigger: AATTACTCCTTGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCACGTGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343975.9
CDS GCA 90 bp ACAAGCACGTGGAAGACGCACAACTGGGCCACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGCACCTCCACCAAGCTACACAGTATA +
Preference number: 5 (lower is better)
Translates to: TSTWKTHNWATSHPI*KDSAAGTSTKLHSI
Trigger: TATACTGTGTAGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCACGTGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508070.1
CDS GCA 90 bp GACGCACAACTGGGCCACGAGTCATCCCATCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGCTACACAGTATATGTTAGAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: DAQLGHESSHLQGLG*WHLHQATQYMLEKQ
Trigger: TTGCTTCTCTAACATATACTGTGTAGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508070.1
CDS CCA 90 bp GCACAACTGGGCCACGAGTCATCCCATCTGCAAGGACTCGGCTGCTaGCACCTCCACCAAGCTACACAGTATATGTTAGAGAAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: AQLGHESSHLQGLGC*HLHQATQYMLEKQA
Trigger: TGCTTGCTTCTCTAACATATACTGTGTAGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508070.1
CDS-3UTR CAA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCTGTGAGGCTCTTCTTTaGGCCTTAGGGAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLCEALL*ALGSSC
Trigger: ACAGCTGCTCCCTAAGGCCAAAAGAAGAGCCTCACA...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAGAAGACCTTCAGTGTaGTTCTGGGACAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSRRPSV*FWDRRG
Trigger: CCCCCTCCTGTCCCAGAACAACACTGAAGGTCTTCT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCCCAACTGGAATGCTGTaGCCTGGGTCTAATCCTGCT +
Preference number: 5 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLPTGML*PGSNPA
Trigger: AGCAGGATTAGACCCAGGCAACAGCATTCCAGTTGG...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS TCA 90 bp CTCCTTGAACACCTAGCATCTGTCCACAGGCAATGTAGATGGCGGTaGCAATGTTTGCTGCATGGGCGTTGTAGCCTCCTATGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LLEHLASVHRQCRWR*QCLLHGRCSLLCSQ
Trigger: CTGGGAGCATAGGAGGCTACAACGCCCATGCAGCAAACATTGTCACCGCCATCTACATTGCCTGTGGACAGATGCTAGGTGTTCAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509085.5
CDS GCA 90 bp CTCTTGTGTGCGACATCCATTGCATACTGGATTCTCTCTGAAATGTaGCTCTCCTGCGTCTTCTGTGCGTTCCTTCTGCTCTCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: LLCATSIAYWILSEM*LSCVFCAFLLLSAW
Trigger: CCAGGCGGAGAGCAGAAGGAACGCACAGAAGACGCAGGAGAGGCACATTTCAGAGAGAATCCAGTATGCAATGGATGTCGCACACAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTATTCAGGCTGTCTTCTaGGTGCAAGCTCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSIQAVF*VQAPWR
Trigger: CCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAAT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAGGTCCCAGTCTTGCTaGTACTTGACAGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSRSQSC*YLTVTL
Trigger: GAGGGTGACTGTCAAGTACAAGCAAGACTGGGACCT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCCAATGCCCATGTTCCAGTTCAGAACTGTCGGGCTATTCAGGCTGTCTTCTGCAATGGCTGTTTGGTaGTGGCTGCCCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NPMPMFQFRTVGLFRLSSAMAVW*WLPLFS
Trigger: GGAGAAGAGGGGCAGCCACAACCAAACAGCCATTGC...AGAAGACAGCCTGAATAGCCCGACAGTTCTGAACTGGAACATGGGCATTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS TCA 90 bp TGTTCATGGACATCATGCAGATGGTCAGTGTCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGGCCACAAAGAGGCCATGCATTCGAA +
Preference number: 5 (lower is better)
Translates to: CSWTSCRWSVSLSPL*LPRDGRPQRGHAFE
Trigger: TTCGAATGCATGGCCTCTTTGTGGCCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGACACTGACCATCTGCATGATGTCCATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509431.1
ENST00000511206.5
ENST00000679456.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS GCA 90 bp ACACAATTCGGGCAAGCTGCCGGGCATTTTCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTAGCATCTGTAGCCAGGGAGAGACAC +
Preference number: 5 (lower is better)
Translates to: TQFGQAAGHFPQDYL*MLLEHLASVARERH
Trigger: GTGTCTCTCCCTGGCTACAGATGCTAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512053.1
CDS-3UTR CAA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCGCAATGGCTGTTTGGTaGTGGCTGCCCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSAMAVW*WLPLFS
Trigger: GGAGAAGAGGGGCAGCCACAACCAAACAGCCATTGC...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACGCTTGCAATGGCTGTTaGGTTGTGGCTGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHACNGC*VVAAPL
Trigger: AAGAGGGGCAGCCACAACCAAACAGCCATTGCAAGC...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGGCTTGCAATGGCTGTTaGGTTGTGGCTGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRACNGC*VVAAPL
Trigger: AAGAGGGGCAGCCACAACCAAACAGCCATTGCAAGC...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCCCCCTATTTGGCCCTTaGCAGCAGAGTGCAGGGAAC +
Preference number: 5 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSPLFGP*QQSAGN
Trigger: GTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGG...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS TCA 90 bp CCAGGGATGGGAGGCCACAAAGAGGCCATGCATTCGAAAAAGTCTTaGCAACATTGTAGCTACAGAATCCTTGGATCCTTGTGGGACGCC +
Preference number: 5 (lower is better)
Translates to: PGMGGHKEAMHSKKS*QHCSYRILGSLWDA
Trigger: GGCGTCCCACAAGGATCCAAGGATTCTGTAGCTACAATGTTGTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGCCTCCCATCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS CCA 90 bp ATGCAGATGGTCAGTGTCACTGTCCCCACTATGACTTCCCAGGGATaGGAGGCCACAAAGAGGCCATGCATTCGAAAAAGTCTTGACAAC +
Preference number: 5 (lower is better)
Translates to: MQMVSVTVPTMTSQG*EATKRPCIRKSLDN
Trigger: GTTGTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGCCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGACACTGACCATCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509431.1
ENST00000511206.5
ENST00000679456.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS CCA 90 bp TGGATCCTGCGTCTCTCTCTCTTGTGTGCGACATCCATTGCATACTaGATTCTCTCTGAAATGTGCCTCTCCTGCGTCTTCTGTGCGTTC +
Preference number: 5 (lower is better)
Translates to: WILRLSLLCATSIAY*ILSEMCLSCVFCAF
Trigger: GAACGCACAGAAGACGCAGGAGAGGCACATTTCAGAGAGAATCCAGTATGCAATGGATGTCGCACACAAGAGAGAGAGACGCAGGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR CAA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACATTCAGGCTGTCTTCTaGGTGCAAGCTCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHIQAVF*VQAPWR
Trigger: CCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAAT...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATAGGTCCCAGTCTTGCTaGTACTTGACAGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNRSQSC*YLTVTL
Trigger: GAGGGTGACTGTCAAGTACAAGCAAGACTGGGACCT...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCAATGGCTGTTTGGTaGTGGCTGCCCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTAMAVW*WLPLFS
Trigger: GGAGAAGAGGGGCAGCCACAACCAAACAGCCATTGC...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCCCCTATTTGGCCCTTaGCAGCAGAGTGCAGGGAAC +
Preference number: 5 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEPLFGP*QQSAGN
Trigger: GTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACCCAACTGGAATGCTGTaGCCTGGGTCTAATCCTGCT +
Preference number: 5 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHPTGML*PGSNPA
Trigger: AGCAGGATTAGACCCAGGCAACAGCATTCCAGTTGG...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS TCA 90 bp TCTCTCTCTCTTGTGTGCGACATCCATTGCATACTGGATTCTCTCTaGAATGTGCCTCTCCTGCGTCTTCTGTGCGTTCCTTCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: SLSLVCDIHCILDSL*NVPLLRLLCVPSAL
Trigger: GAGAGCAGAAGGAACGCACAGAAGACGCAGGAGAGGCACATTTCAGAGAGAATCCAGTATGCAATGGATGTCGCACACAAGAGAGAGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS TCA 90 bp CCAGGGATGGGAGGCCACAAAGAGGCCATGCATTCGAAAAAGTCTTaGCAACATTGTAGCTACAGAATCCTTGGATCCTGCGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PGMGGHKEAMHSKKS*QHCSYRILGSCVSL
Trigger: GAGAGAGACGCAGGATCCAAGGATTCTGTAGCTACAATGTTGTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGCCTCCCATCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS GCA 90 bp ACACAATTCGGGCAAGCTGCCGGGCATTTTCCCCAGGATTATCTTTaGATGCTCCTTGAACACCTAGCATCTGTCCACAGGCAATGTAGA +
Preference number: 5 (lower is better)
Translates to: TQFGQAAGHFPQDYL*MLLEHLASVHRQCR
Trigger: TCTACATTGCCTGTGGACAGATGCTAGGTGTTCAAGGAGCATGCAAAGATAATCCTGGGGAAAATGCCCGGCAGCTTGCCCGAATTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509085.5
CDS-3UTR CAA 90 bp AGAGAATCAGAAATCGCTGGGGCAGGGCCCAGCAGTCTGTTTAAGCAGGTCCTCACTTTGCTAATGTGCTaGCTCTGGAAAGGTCAATCA +
Preference number: 5 (lower is better)
Translates to: RESEIAGAGPSSLFKQVLTLLMC*LWKGQS
Trigger: TGATTGACCTTTCCAGAGCAAGCACATTAGCAAAGT...GAGGACCTGCTTAAACAGACTGCTGGGCCCTGCCCCAGCGATTTCTGATTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTACTTCATCCTGTGAGTaGGAACTGAGGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSTSSCE*ELRANF
Trigger: AAAGTTTGCCCTCAGTTCCAACTCACAGGATGAAGT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTGTCTGGGACTTTCTTTaGTGTCACTACAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSVWDFL*CHYRRC
Trigger: ACATCTCCTGTAGTGACACAAAAGAAAGTCCCAGAC...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTCAAGACAACCTTCTGTaGTTGCCATTGGAACCTGAA +
Preference number: 5 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSQDNLL*LPLEPE
Trigger: TTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTG...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCAGGTCCCAGTCTTGCTaGTACTTGACAGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFRSQSC*YLTVTL
Trigger: GAGGGTGACTGTCAAGTACAAGCAAGACTGGGACCT...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTGCAATGGCTGTTaGGTTGTGGCTGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTACNGC*VVAAPL
Trigger: AAGAGGGGCAGCCACAACCAAACAGCCATTGCAAGC...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCTGTGAGGCTCTTCTTTaGGCCTTAGGGAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFCEALL*ALGSSC
Trigger: ACAGCTGCTCCCTAAGGCCAAAAGAAGAGCCTCACA...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS TCA 90 bp CCAGGGATGGGAGGCCACAAAGAGGCCATGCATTCGAAAAAGTCTTaGCAACATTGTAGCTACAGAATCCTTGGATCCTCCAGATCTCAC +
Preference number: 5 (lower is better)
Translates to: PGMGGHKEAMHSKKS*QHCSYRILGSSRSH
Trigger: GTGAGATCTGGAGGATCCAAGGATTCTGTAGCTACAATGTTGTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGCCTCCCATCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509431.1
ENST00000679456.1
ENST00000680160.1
ENST00000681567.1
CDS TCA 90 bp TTGTGGACTCTATGCCTGATACATCATACCTGCAAACAGGCTTGCTaGGGTAGTAGGTTGGTCCCACCACCCACCGTTCCTATCTCTATA +
Preference number: 5 (lower is better)
Translates to: LWTLCLIHHTCKQAC*GSRLVPPPTVPISI
Trigger: TATAGAGATAGGAACGGTGGGTGGTGGGACCAACCTACTACCTCAGCAAGCCTGTTTGCAGGTATGATGTATCAGGCATAGAGTCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514315.2
CDS-3UTR CAA 90 bp ATTAGCCAACACTCGGTCTCTCCCCAGGTGTTTCCCAACCTTGTGCTACTGAATGTAGCTACAGAATCCTaGGATCCTCCAGATCTCACT +
Preference number: 5 (lower is better)
Translates to: ISQHSVSPQVFPNLVLLNVATES*DPPDLT
Trigger: AGTGAGATCTGGAGGATCCAAGGATTCTGTAGCTAC...ATTCAGTAGCACAAGGTTGGGAAACACCTGGGGAGAGACCGAGTGTTGGCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTATCTGCTGTACTGTTTaGAGGAGAAGGATCAGCTAT +
Preference number: 5 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSICCTV*RRRISY
Trigger: ATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGAT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGGGTTCTGAAAGCTTCTaGGAAAGTAACTGTCGGCGA +
Preference number: 5 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRGSESF*ESNCRR
Trigger: TCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAACC...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACTCCACCAAGACCTATaGCTCTGCAGCCTCTATTGG +
Preference number: 5 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTLHQDL*LCSLYW
Trigger: CCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGAG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRTSLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAAGGTCCCAGTCTTGCTaGTACTTGACAGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: RSEESAWKEPETSLKEPKRSQSC*YLTVTL
Trigger: GAGGGTGACTGTCAAGTACAAGCAAGACTGGGACCT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGTAGCTACAGAATCCTaGGATCCTTGTGGGACGCCG +
Preference number: 5 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRVATES*DPCGTP
Trigger: CGGCGTCCCACAAGGATCCAAGGATTCTGTAGCTAC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR CAA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGGCAATGGCTGTTTGGTaGTGGCTGCCCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EMCPLDLILYRLLKSNILAMAVW*WLPLFS
Trigger: GGAGAAGAGGGGCAGCCACAACCAAACAGCCATTGC...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACCAACTGGAATGCTGTaGCCTGGGTCTAATCCTGCT +
Preference number: 5 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTPTGML*PGSNPA
Trigger: AGCAGGATTAGACCCAGGCAACAGCATTCCAGTTGG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCAGGGAAGCTCCAGAATaGCCACCAACACAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVREAPE*PPTQPK
Trigger: TTTGGGCTGTGTTGGTGGCAATTCTGGAGCTTCCCT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR CAA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCCTCAAGGACATTCCTaGCAGTCCCCGCGGGTCCGA +
Preference number: 5 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCPQGHS*QSPRVR
Trigger: TCGGACCCGCGGGGACTGCAAGGAATGTCCTTGAGG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS-3UTR CAA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGAGGCAGGAGAACTGCTaGAACCCGGGAAGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: EMCPLDLILYRLLKSNILRQENC*NPGSGG
Trigger: ACCTCCACTTCCCGGGTTCAAGCAGTTCTCCTGCCT...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS GCA 90 bp TTCTCTCTGAAATGTGCCTCTCCTGCGTCTTCTGTGCGTTCCTTCTaGTCTCCGCCTGGTGCAGGGCTTTATTATGTCTTACTTAAAACA +
Preference number: 5 (lower is better)
Translates to: FSLKCASPASSVRSF*SPPGAGLYYVLLKT
Trigger: TGTTTTAAGTAAGACATAATAAAGCCCTGCACCAGGCGGAGAGCAGAAGGAACGCACAGAAGACGCAGGAGAGGCACATTTCAGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR CAA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACACTTCATCCTGTGAGTaGGAACTGAGGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHTSSCE*ELRANF
Trigger: AAAGTTTGCCCTCAGTTCCAACTCACAGGATGAAGT...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCAAGACAACCTTCTGTaGTTGCCATTGGAACCTGAA +
Preference number: 5 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRQDNLL*LPLEPE
Trigger: TTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCTCCACCAAGACCTATaGCTCTGCAGCCTCTATTGG +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSILHQDL*LCSLYW
Trigger: CCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGAG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ACAAGAGCATCGAGGGTAAACGTAGGACCTAAAATTGCCATTCCACGAGCAATACTCCACCAAGACCTATaGCTCTGCAGCCTCTATTGG +
Preference number: 5 (lower is better)
Translates to: TRASRVNVGPKIAIPRAILHQDL*LCSLYW
Trigger: CCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGAG...TATTGCTCGTGGAATGGCAATTTTAGGTCCTACGTTTACCCTCGATGCTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSTSLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGT...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTGAGCCCACTAAATTCTaGTTAATGTTGACCTCAATC +
Preference number: 5 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSEPTKF*LMLTSI
Trigger: GATTGAGGTCAACATTAACAAGAATTTAGTGGGCTC...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGAGAGCCCACTAAATTCTaGTTAATGTTGACCTCAATC +
Preference number: 5 (lower is better)
Translates to: DARVPIPPSAALKLAQDGEPTKF*LMLTSI
Trigger: GATTGAGGTCAACATTAACAAGAATTTAGTGGGCTC...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAATTCAGGCTGTCTTCTaGGTGCAAGCTCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAIQAVF*VQAPWR
Trigger: CCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAAT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGTTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTAGGTCCCAGTCTTGCTaGTACTTGACAGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSIRSQSC*YLTVTL
Trigger: GAGGGTGACTGTCAAGTACAAGCAAGACTGGGACCT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ACAAGAGCATCGAGGGTAAACGTAGGACCTAAAATTGCCATTCCACGAGCAATAAGGTCCCAGTCTTGCTaGTACTTGACAGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: TRASRVNVGPKIAIPRAIRSQSC*YLTVTL
Trigger: GAGGGTGACTGTCAAGTACAAGCAAGACTGGGACCT...TATTGCTCGTGGAATGGCAATTTTAGGTCCTACGTTTACCCTCGATGCTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSSKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFSKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAAGAATCCTTGGATCCTaGTGGGACGCCGAAATCATG +
Preference number: 5 (lower is better)
Translates to: RSEESAWKEPETSLKEPKRILGS*WDAEIM
Trigger: CATGATTTCGGCGTCCCACAAGGATCCAAGGATTCT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR CAA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATGTGAGGCTCTTCTTTaGGCCTTAGGGAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTCEALL*ALGSSC
Trigger: ACAGCTGCTCCCTAAGGCCAAAAGAAGAGCCTCACA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGAGAAGACCTTCAGTGTaGTTCTGGGACAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: EMCPLDLILYRLLKSNILRRPSV*FWDRRG
Trigger: CCCCCTCCTGTCCCAGAACAACACTGAAGGTCTTCT...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGAGAAGACCTTCAGTGTaGTTCTGGGACAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LALPLSLSKRCLVEMINLRRPSV*FWDRRG
Trigger: CCCCCTCCTGTCCCAGAACAACACTGAAGGTCTTCT...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTAATTTTTCCCCCTATTaGGCCCTTTGCAGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFNFSPY*ALCSRV
Trigger: CACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCAATTTTTCCCCCTATTaGGCCCTTTGCAGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFNFSPY*ALCSRV
Trigger: CACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS GCA 90 bp AACTGGTCTTCCCAGTCTTACACGCATGCACTTCCCAATCTGTCCTaGAGAACTCCCACATGCAGTATGTGGCATACTACTTCCTATTAT +
Preference number: 5 (lower is better)
Translates to: NWSSQSYTHALPNLS*RTPTCSMWHTTSYY
Trigger: ATAATAGGAAGTAGTATGCCACATACTGCATGTGGGAGTTCTGCAGGACAGATTGGGAAGTGCATGCGTGTAAGACTGGGAAGACCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS CCA 90 bp CATGCACTTCCCAATCTGTCCTGCAGAACTCCCACATGCAGTATGTaGCATACTACTTCCTATTATGCCATAGACCCAAATCAGCGTTTC +
Preference number: 5 (lower is better)
Translates to: HALPNLSCRTPTCSM*HTTSYYAIDPNQRF
Trigger: GAAACGCTGATTTGGGTCTATGGCATAATAGGAAGTAGTATGCCACATACTGCATGTGGGAGTTCTGCAGGACAGATTGGGAAGTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR CAA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGACTTTGCTAATGTGCTaGCTCTGGAAAGGTCAATCA +
Preference number: 5 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRTLLMC*LWKGQS
Trigger: TGATTGACCTTTCCAGAGCAAGCACATTAGCAAAGT...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACATCTGCTGTACTGTTTaGAGGAGAAGGATCAGCTAT +
Preference number: 5 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHICCTV*RRRISY
Trigger: ATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGAT...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCGTCTGGGACTTTCTTTaGTGTCACTACAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSVWDFL*CHYRRC
Trigger: ACATCTCCTGTAGTGACACAAAAGAAAGTCCCAGAC...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACGGTTCTGAAAGCTTCTaGGAAAGTAACTGTCGGCGA +
Preference number: 5 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDGSESF*ESNCRR
Trigger: TCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAACC...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCGGTTCTGAAAGCTTCTaGGAAAGTAACTGTCGGCGA +
Preference number: 5 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVGSESF*ESNCRR
Trigger: TCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAACC...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTCTCCACCAAGACCTATaGCTCTGCAGCCTCTATTGG +
Preference number: 5 (lower is better)
Translates to: AVSVITSIHPPQDNALSFLHQDL*LCSLYW
Trigger: CCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGAG...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGCTCCACCAAGACCTATaGCTCTGCAGCCTCTATTGG +
Preference number: 5 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMLHQDL*LCSLYW
Trigger: CCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGAG...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGTGCGTCCAGCTATACTaGTATGAAGTTTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRCVQLY*YEVSVD
Trigger: GTCTACAGAAACTTCATACAAGTATAGCTGGACGCA...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CCCTGTGTGAATGTTTCAGTCACCAACCTCCTGGCCACAGGAACTAGGCACAGTAATACTCGTGAAGTTTaGAAAGTGCTTTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: PCVNVSVTNLLATGTRHSNTREV*KVLSLY
Trigger: GTACAGAGAAAGCACTTTCAAAACTTCACGAGTATT...ACTGTGCCTAGTTCCTGTGGCCAGGAGGTTGGTGACTGAAACATTCACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GATGCAAGAGTGCCCATACCTCCCTCTGCAGCTCTCAAACTTGCTCAGGATGGATATATAAATCTTCATTaGTGGGACCACTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: DARVPIPPSAALKLAQDGYINLH*WDHLLP
Trigger: TGGAAGCAAGTGGTCCCACAAATGAAGATTTATATA...TCCATCCTGAGCAAGTTTGAGAGCTGCAGAGGGAGGTATGGGCACTCTTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTATTCAGGCTGTCTTCTaGGTGCAAGCTCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: AVSVITSIHPPQDNALSFIQAVF*VQAPWR
Trigger: CCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAAT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATATTCAGGCTGTCTTCTaGGTGCAAGCTCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LSERAKNQVAVSVITSIHIQAVF*VQAPWR
Trigger: CCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAAT...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TCAAATGCCTCCTTTATCACTGCGAACCCTTCAGATGTTTCGAGCCAGGCTTTCTTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SNASFITANPSDVSSQAFFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...GAAAGCCTGGCTCGAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CAA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGAGGTCCCAGTCTTGCTaGTACTTGACAGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMRSQSC*YLTVTL
Trigger: GAGGGTGACTGTCAAGTACAAGCAAGACTGGGACCT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLSKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLESKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAAGAATCCTTGGATCCTaGTGGGACGCCGAAATCATG +
Preference number: 5 (lower is better)
Translates to: NQVAVSVITSIHPPQDNARILGS*WDAEIM
Trigger: CATGATTTCGGCGTCCCACAAGGATCCAAGGATTCT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR CAA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCTGCAGCTCTCAAACTaGCTCAGGATGGAAAACAAG +
Preference number: 5 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDLQLSN*LRMENK
Trigger: CTTGTTTTCCATCCTGAGCAAGTTTGAGAGCTGCAG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGTGTGAGGCTCTTCTTTaGGCCTTAGGGAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: EMCPLDLILYRLLKSNILCEALL*ALGSSC
Trigger: ACAGCTGCTCCCTAAGGCCAAAAGAAGAGCCTCACA...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACAGAAGACCTTCAGTGTaGTTCTGGGACAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNRRPSV*FWDRRG
Trigger: CCCCCTCCTGTCCCAGAACAACACTGAAGGTCTTCT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCCCCTATTTGGCCCTTaGCAGCAGAGTGCAGGGAAC +
Preference number: 5 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFPLFGP*QQSAGN
Trigger: GTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCACCCCTATTTGGCCCTTaGCAGCAGAGTGCAGGGAAC +
Preference number: 5 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSPLFGP*QQSAGN
Trigger: GTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGG...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCAATTTTTCCCCCTATTaGGCCCTTTGCAGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVNFSPY*ALCSRV
Trigger: CACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS TCA 90 bp CCAGGGATGGGAGGCCACAAAGAGGCCATGCATTCGAAAAAGTCTTaGCAACATTGTAGCTACAGAATCCTTGGATCATGCCATAGAATT +
Preference number: 5 (lower is better)
Translates to: PGMGGHKEAMHSKKS*QHCSYRILGSCHRI
Trigger: AATTCTATGGCATGATCCAAGGATTCTGTAGCTACAATGTTGTCAAGACTTTTTCGAATGCATGGCCTCTTTGTGGCCTCCCATCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442032.2
CDS GCA 90 bp TCTTACACGCATGCACTTCCCAATCTGTCCTGCAGAACTCCCACATaGAGTATGTGGCATACTACTTCCTATTATGCCATAGACCCAAAT +
Preference number: 5 (lower is better)
Translates to: SYTHALPNLSCRTPT*SMWHTTSYYAIDPN
Trigger: ATTTGGGTCTATGGCATAATAGGAAGTAGTATGCCACATACTGCATGTGGGAGTTCTGCAGGACAGATTGGGAAGTGCATGCGTGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR CAA 90 bp ATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTTTCAGAGTCACTTCATCCTGTGAGTaGGAACTGAGGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: ITKRLSMLPWFPGMFFRVTSSCE*ELRANF
Trigger: AAAGTTTGCCCTCAGTTCCAACTCACAGGATGAAGT...GACTCTGAAAAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAACTTCATCCTGTGAGTaGGAACTGAGGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: RSEESAWKEPETSLKEPKTSSCE*ELRANF
Trigger: AAAGTTTGCCCTCAGTTCCAACTCACAGGATGAAGT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACACTTCATCCTGTGAGTaGGAACTGAGGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDTSSCE*ELRANF
Trigger: AAAGTTTGCCCTCAGTTCCAACTCACAGGATGAAGT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AATTTTTCCCCCTATTTGGCCCTTTGCAGCAGAGTGCAGGGAACAAACAGGAGGCTTGGTTCAATTCTCTaGGACACATTTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: NFSPYLALCSRVQGTNRRLGSIL*DTFSSS
Trigger: ACTGGATGAAAATGTGTCCAAGAGAATTGAACCAAG...CCTCCTGTTTGTTCCCTGCACTCTGCTGCAAAGGGCCAAATAGGGGGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGTCTGGGACTTTCTTTaGTGTCACTACAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLVWDFL*CHYRRC
Trigger: ACATCTCCTGTAGTGACACAAAAGAAAGTCCCAGAC...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATCTCATTGCTCAGCAGATCACCCAGGCAGAGAGCAGGCTTAAAGATCCTTCACTCACGTCTACAACAATaGTCTGGGACTTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: ISLLSRSPRQRAGLKILHSRLQQ*SGTFFC
Trigger: ACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGA...GTGAAGGATCTTTAAGCCTGCTCTCTGCCTGGGTGATCTGCTGAGCAATGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTGGTTCTGAAAGCTTCTaGGAAAGTAACTGTCGGCGA +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSIGSESF*ESNCRR
Trigger: TCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAACC...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACAAGACAACCTTCTGTaGTTGCCATTGGAACCTGAA +
Preference number: 5 (lower is better)
Translates to: RSEESAWKEPETSLKEPKQDNLL*LPLEPE
Trigger: TTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCAAGACAACCTTCTGTaGTTGCCATTGGAACCTGAA +
Preference number: 5 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEQDNLL*LPLEPE
Trigger: TTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSITSLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACATTCAGGCTGTCTTCTaGGTGCAAGCTCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNIQAVF*VQAPWR
Trigger: CCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAAT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: NQVAVSVITSIHPPQDNASKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTGTAGCTACAGAATCCTaGGATCCTTGTGGGACGCCG +
Preference number: 5 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCVATES*DPCGTP
Trigger: CGGCGTCCCACAAGGATCCAAGGATTCTGTAGCTAC...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681271.1
ENST00000681410.1
CDS-3UTR CAA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTGCTTGCAATGGCTGTTaGGTTGTGGCTGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCACNGC*VVAAPL
Trigger: AAGAGGGGCAGCCACAACCAAACAGCCATTGCAAGC...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAATGTTTACACAGCTTAAATGCTaGCAATGGCTGTTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: ADTITKRLSMLPWFPGMFTQLKC*QWLFGC
Trigger: ACAACCAAACAGCCATTGCAAGCATTTAAGCTGTGT...AAACATTCCAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACACTTTGCTAATGTGCTaGCTCTGGAAAGGTCAATCA +
Preference number: 5 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDTLLMC*LWKGQS
Trigger: TGATTGACCTTTCCAGAGCAAGCACATTAGCAAAGT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTACTTCATCCTGTGAGTaGGAACTGAGGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSITSSCE*ELRANF
Trigger: AAAGTTTGCCCTCAGTTCCAACTCACAGGATGAAGT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACATCTGCTGTACTGTTTaGAGGAGAAGGATCAGCTAT +
Preference number: 5 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDICCTV*RRRISY
Trigger: ATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGAT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAATCTGCTGTACTGTTTaGAGGAGAAGGATCAGCTAT +
Preference number: 5 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTICCTV*RRRISY
Trigger: ATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGAT...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTGTCTGGGACTTTCTTTaGTGTCACTACAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSIVWDFL*CHYRRC
Trigger: ACATCTCCTGTAGTGACACAAAAGAAAGTCCCAGAC...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCTCACGTCTACAACAATaGTCTGGGACTTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFSRLQQ*SGTFFC
Trigger: ACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGA...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCTCCACCAAGACCTATaGCTCTGCAGCCTCTATTGG +
Preference number: 5 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSLHQDL*LCSLYW
Trigger: CCAATAGAGGCTGCAGAGCAATAGGTCTTGGTGGAG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACCTTTCTCTGTACCCTTaGAAATCATGTTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDLSLYP*KSCSSP
Trigger: TGGGGATGAACATGATTTCAAAGGGTACAGAGAAAG...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACACTTTCTCTGTACCCTTaGAAATCATGTTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: HPQLYQAVQIPLSNSAHTLSLYP*KSCSSP
Trigger: TGGGGATGAACATGATTTCAAAGGGTACAGAGAAAG...TGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGCTTTCTCTGTACCCTTaGAAATCATGTTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLLSLYP*KSCSSP
Trigger: TGGGGATGAACATGATTTCAAAGGGTACAGAGAAAG...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: AVSVITSIHPPQDNALSFTSLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCGAGCCCACTAAATTCTaGTTAATGTTGACCTCAATC +
Preference number: 5 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFEPTKF*LMLTSI
Trigger: GATTGAGGTCAACATTAACAAGAATTTAGTGGGCTC...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGATTCAGGCTGTCTTCTaGGTGCAAGCTCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQIQAVF*VQAPWR
Trigger: CCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAAT...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000511986.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GTTTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTATTCAGGCTGTCTTCTaGGTGCAAGCTCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: VSWNVFQSPSSTRDIISFIQAVF*VQAPWR
Trigger: CCTCCAAGGAGCTTGCACCAAGAAGACAGCCTGAAT...AAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSIFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: AVSVITSIHPPQDNALSFSKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTAGCCCTCCCACTCTCACTATCCAAAAGATGTCTAGTTGAGATGATAAATCTGTCTAAGGTCCCAGTCTaGCTTGTACTTGACAGTCAC +
Preference number: 5 (lower is better)
Translates to: LALPLSLSKRCLVEMINLSKVPV*LVLDSH
Trigger: GTGACTGTCAAGTACAAGCAAGACTGGGACCTTAGA...CAGATTTATCATCTCAACTAGACATCTTTTGGATAGTGAGAGTGGGAGGGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACGTAGCTACAGAATCCTaGGATCCTGCGTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNVATES*DPASLS
Trigger: AGAGAGAGACGCAGGATCCAAGGATTCTGTAGCTAC...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR CAA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAAACACAGCTTAAATGCTaGCAATGGCTGTTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: RSEESAWKEPETSLKEPKTQLKC*QWLFGC
Trigger: ACAACCAAACAGCCATTGCAAGCATTTAAGCTGTGT...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGACACAGCTTAAATGCTaGCAATGGCTGTTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLTQLKC*QWLFGC
Trigger: ACAACCAAACAGCCATTGCAAGCATTTAAGCTGTGT...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCCAACTGGAATGCTGTaGCCTGGGTCTAATCCTGCT +
Preference number: 5 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSPTGML*PGSNPA
Trigger: AGCAGGATTAGACCCAGGCAACAGCATTCCAGTTGG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTTTTATGCTCCCTGCCAACTGGCTTCAGAATTAGCCAACTGGAATGCTGTTGCCATCCTCTTCAAACTTaGGACATTCATAATTCCAAC +
Preference number: 5 (lower is better)
Translates to: LLCSLPTGFRISQLECCCHPLQT*DIHNSN
Trigger: GTTGGAATTATGAATGTCCAAAGTTTGAAGAGGATG...GCAACAGCATTCCAGTTGGCTAATTCTGAAGCCAGTTGGCAGGGAGCATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTACTTTGCTAATGTGCTaGCTCTGGAAAGGTCAATCA +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSITLLMC*LWKGQS
Trigger: TGATTGACCTTTCCAGAGCAAGCACATTAGCAAAGT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATACTTCATCCTGTGAGTaGGAACTGAGGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: LSERAKNQVAVSVITSIHTSSCE*ELRANF
Trigger: AAAGTTTGCCCTCAGTTCCAACTCACAGGATGAAGT...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAATCTGCTGTACTGTTTaGAGGAGAAGGATCAGCTAT +
Preference number: 5 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAICCTV*RRRISY
Trigger: ATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGAT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGTCACGTCTACAACAATaGTCTGGGACTTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLSRLQQ*SGTFFC
Trigger: ACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGA...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAGGGATATGCTTAGCATaGACTAACTGGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAGICLA*TNWMIS
Trigger: TGAGATCATCCAGTTAGTCAATGCTAAGCATATCCC...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAGGGATATGCTTAGCATaGACTAACTGGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRGICLA*TNWMIS
Trigger: TGAGATCATCCAGTTAGTCAATGCTAAGCATATCCC...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTGGGATATGCTTAGCATaGACTAACTGGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSIGICLA*TNWMIS
Trigger: TGAGATCATCCAGTTAGTCAATGCTAAGCATATCCC...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATGGTTCTGAAAGCTTCTaGGAAAGTAACTGTCGGCGA +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDGSESF*ESNCRR
Trigger: TCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAACC...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATGCGTCCAGCTATACTaGTATGAAGTTTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRCVQLY*YEVSVD
Trigger: GTCTACAGAAACTTCATACAAGTATAGCTGGACGCA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATGCGTCCAGCTATACTaGTATGAAGTTTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: NQVAVSVITSIHPPQDNACVQLY*YEVSVD
Trigger: GTCTACAGAAACTTCATACAAGTATAGCTGGACGCA...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATGCGTCCAGCTATACTaGTATGAAGTTTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTCVQLY*YEVSVD
Trigger: GTCTACAGAAACTTCATACAAGTATAGCTGGACGCA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNTSLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATAACAATGCAGACACAATCACTAAGAGGCTCTCCATGCTGCCATGGTTTCCTGGAGCCCACTAAATTCTaGTTAATGTTGACCTCAATC +
Preference number: 5 (lower is better)
Translates to: ITMQTQSLRGSPCCHGFLEPTKF*LMLTSI
Trigger: GATTGAGGTCAACATTAACAAGAATTTAGTGGGCTC...CAGGAAACCATGGCAGCATGGAGAGCCTCTTAGTGATTGTGTCTGCATTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTTGCCTGGGTCTAATCCTGCTCCAGCACTACAATCCTGGGACATTAAAGTTCTATATAAATCTTCATTaGTGGGACCACTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: CCLGLILLQHYNPGTLKFYINLH*WDHLLP
Trigger: TGGAAGCAAGTGGTCCCACAAATGAAGATTTATATA...GAACTTTAATGTCCCAGGATTGTAGTGCTGGAGCAGGATTAGACCCAGGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TCAAATGCCTCCTTTATCACTGCGAACCCTTCAGATGTTTCGAGCCAGGCTTTCTATATAAATCTTCATTaGTGGGACCACTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SNASFITANPSDVSSQAFYINLH*WDHLLP
Trigger: TGGAAGCAAGTGGTCCCACAAATGAAGATTTATATA...GAAAGCCTGGCTCGAAACATCTGAAGGGTTCGCAGTGATAAAGGAGGCATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGGCCATCCTCAGCTATACCAAGCTGTACAAATTCCCCTCTCCAATTCAGCATAATGCTCAGGAGATaGGTATTGATGTGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: KRPSSAIPSCTNSPLQFSIMLRR*VLMCFA
Trigger: AGCAAAACACATCAATACCAATCTCCTGAGCATTAT...GCTGAATTGGAGAGGGGAATTTGTACAGCTTGGTATAGCTGAGGATGGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCTGCAGCTCTCAAACTaGCTCAGGATGGAAAACAAG +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNLQLSN*LRMENK
Trigger: CTTGTTTTCCATCCTGAGCAAGTTTGAGAGCTGCAG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATGTAGCTACAGAATCCTaGGATCAGGCTGAGTATCCT +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDVATES*DQAEYP
Trigger: AGGATACTCAGCCTGATCCAAGGATTCTGTAGCTAC...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS-3UTR CAA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGGTAGCTACAGAATCCTaGGATCCTCCAGATCTCACT +
Preference number: 5 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQVATES*DPPDLT
Trigger: AGTGAGATCTGGAGGATCCAAGGATTCTGTAGCTAC...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTGTAGCTACAGAATCCTaGGATCCTCCAGATCTCACT +
Preference number: 5 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFVATES*DPPDLT
Trigger: AGTGAGATCTGGAGGATCCAAGGATTCTGTAGCTAC...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CAGGGTTTCCTGGACAACATTAAAGAACATTATCTTCTCTGGCCCAGGCTAGAGCAACCACAGATCTTATaGTTACCAGTAAACATGTTC +
Preference number: 5 (lower is better)
Translates to: QGFLDNIKEHYLLWPRLEQPQIL*LPVNMF
Trigger: GAACATGTTTACTGGTAACAATAAGATCTGTGGTTG...CTCTAGCCTGGGCCAGAGAAGATAATGTTCTTTAATGTTGTCCAGGAAACCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATCTGAGGAGTCTGCATGGAAAGAACCTGAGACCTCTCTGAAAGAGCCAAAACATCCTCTTCAAACTTaGGACATTCATAATTCCAAC +
Preference number: 5 (lower is better)
Translates to: RSEESAWKEPETSLKEPKHPLQT*DIHNSN
Trigger: GTTGGAATTATGAATGTCCAAAGTTTGAAGAGGATG...TTTTGGCTCTTTCAGAGAGGTCTCAGGTTCTTTCCATGCAGACTCCTCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGACTTTGCTAATGTGCTaGCTCTGGAAAGGTCAATCA +
Preference number: 5 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMTLLMC*LWKGQS
Trigger: TGATTGACCTTTCCAGAGCAAGCACATTAGCAAAGT...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTACTTTGCTAATGTGCTaGCTCTGGAAAGGTCAATCA +
Preference number: 5 (lower is better)
Translates to: AVSVITSIHPPQDNALSFTLLMC*LWKGQS
Trigger: TGATTGACCTTTCCAGAGCAAGCACATTAGCAAAGT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACTTGGTTCAATTCTCTaGGACACATTTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRLGSIL*DTFSSS
Trigger: ACTGGATGAAAATGTGTCCAAGAGAATTGAACCAAG...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACACTTGGTTCAATTCTCTaGGACACATTTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTLGSIL*DTFSSS
Trigger: ACTGGATGAAAATGTGTCCAAGAGAATTGAACCAAG...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCTTGGTTCAATTCTCTaGGACACATTTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSILGSIL*DTFSSS
Trigger: ACTGGATGAAAATGTGTCCAAGAGAATTGAACCAAG...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACGTCTGGGACTTTCTTTaGTGTCACTACAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNVWDFL*CHYRRC
Trigger: ACATCTCCTGTAGTGACACAAAAGAAAGTCCCAGAC...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATCACGTCTACAACAATaGTCTGGGACTTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: NQVAVSVITSIHPPQDNASRLQQ*SGTFFC
Trigger: ACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGA...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACATCACGTCTACAACAATaGTCTGGGACTTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTSRLQQ*SGTFFC
Trigger: ACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGA...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GAGATGTGCCCCTTAGATTTAATCCTGTATCGTCTCCTGAAATCAAACATCCTGGGGATATGCTTAGCATaGACTAACTGGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: EMCPLDLILYRLLKSNILGICLA*TNWMIS
Trigger: TGAGATCATCCAGTTAGTCAATGCTAAGCATATCCC...CAGGATGTTTGATTTCAGGAGACGATACAGGATTAAATCTAAGGGGCACATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGGGTTCTGAAAGCTTCTaGGAAAGTAACTGTCGGCGA +
Preference number: 5 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQGSESF*ESNCRR
Trigger: TCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAACC...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTGGTTCTGAAAGCTTCTaGGAAAGTAACTGTCGGCGA +
Preference number: 5 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFGSESF*ESNCRR
Trigger: TCGCCGACAGTTACTTTCCAAGAAGCTTTCAGAACC...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCAAGACAACCTTCTGTaGTTGCCATTGGAACCTGAA +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDQDNLL*LPLEPE
Trigger: TTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCCAAGACAACCTTCTGTaGTTGCCATTGGAACCTGAA +
Preference number: 5 (lower is better)
Translates to: FLECFSESIFYKRHHQLSQDNLL*LPLEPE
Trigger: TTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTG...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCTTTCTCTGTACCCTTaGAAATCATGTTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: LSERAKNQVAVSVITSIHLSLYP*KSCSSP
Trigger: TGGGGATGAACATGATTTCAAAGGGTACAGAGAAAG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATACTCGTGAAGTTTaGAAAGTGCTTTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: AKNQVAVSVITSIHPPQDNTREV*KVLSLY
Trigger: GTACAGAGAAAGCACTTTCAAAACTTCACGAGTATT...GTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCTSLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGT...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFTSLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAGAGCCCACTAAATTCTaGTTAATGTTGACCTCAATC +
Preference number: 5 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAEPTKF*LMLTSI
Trigger: GATTGAGGTCAACATTAACAAGAATTTAGTGGGCTC...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CCAAGCTGTACAAATTCCCCTCTCCAATTCAGCTCACACAGCTTAAATGCTTGCTATATAAATCTTCATTaGTGGGACCACTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: PSCTNSPLQFSSHSLNACYINLH*WDHLLP
Trigger: TGGAAGCAAGTGGTCCCACAAATGAAGATTTATATA...GCAAGCATTTAAGCTGTGTGAGCTGAATTGGAGAGGGGAATTTGTACAGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACATTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNISLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAAT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511986.1
CDS-3UTR CAA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCTGCGTCTCTCTCTCTaGTGTGCGACATCCATTGCA +
Preference number: 5 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVLRLSL*CATSIA
Trigger: TGCAATGGATGTCGCACACAAGAGAGAGAGACGCAG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS-3UTR CAA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCTGCAGCTCTCAAACTaGCTCAGGATGGAAAACAAG +
Preference number: 5 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSLQLSN*LRMENK
Trigger: CTTGTTTTCCATCCTGAGCAAGTTTGAGAGCTGCAG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATACTTTGCTAATGTGCTaGCTCTGGAAAGGTCAATCA +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDTLLMC*LWKGQS
Trigger: TGATTGACCTTTCCAGAGCAAGCACATTAGCAAAGT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTACTTCATCCTGTGAGTaGGAACTGAGGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSTSSCE*ELRANF
Trigger: AAAGTTTGCCCTCAGTTCCAACTCACAGGATGAAGT...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATATCTGCTGTACTGTTTaGAGGAGAAGGATCAGCTAT +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDICCTV*RRRISY
Trigger: ATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGAT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACATCTGCTGTACTGTTTaGAGGAGAAGGATCAGCTAT +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNICCTV*RRRISY
Trigger: ATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGAT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTGTCTGGGACTTTCTTTaGTGTCACTACAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSVWDFL*CHYRRC
Trigger: ACATCTCCTGTAGTGACACAAAAGAAAGTCCCAGAC...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGTCACGTCTACAACAATaGTCTGGGACTTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMSRLQQ*SGTFFC
Trigger: ACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGA...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACGGGATATGCTTAGCATaGACTAACTGGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNGICLA*TNWMIS
Trigger: TGAGATCATCCAGTTAGTCAATGCTAAGCATATCCC...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATGGGATATGCTTAGCATaGACTAACTGGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDGICLA*TNWMIS
Trigger: TGAGATCATCCAGTTAGTCAATGCTAAGCATATCCC...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTCAAGACAACCTTCTGTaGTTGCCATTGGAACCTGAA +
Preference number: 5 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCQDNLL*LPLEPE
Trigger: TTCAGGTTCCAATGGCAACAACAGAAGGTTGTCTTG...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGCGTCCAGCTATACTaGTATGAAGTTTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNCVQLY*YEVSVD
Trigger: GTCTACAGAAACTTCATACAAGTATAGCTGGACGCA...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCTTTCTCTGTACCCTTaGAAATCATGTTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDLSLYP*KSCSSP
Trigger: TGGGGATGAACATGATTTCAAAGGGTACAGAGAAAG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAATACTCGTGAAGTTTaGAAAGTGCTTTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: KSQKPSGCLSDHIYSSSTNTREV*KVLSLY
Trigger: GTACAGAGAAAGCACTTTCAAAACTTCACGAGTATT...TGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGAAATACTCGTGAAGTTTaGAAAGTGCTTTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRNTREV*KVLSLY
Trigger: GTACAGAGAAAGCACTTTCAAAACTTCACGAGTATT...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTGAGCCCACTAAATTCTaGTTAATGTTGACCTCAATC +
Preference number: 5 (lower is better)
Translates to: AVSVITSIHPPQDNALSFEPTKF*LMLTSI
Trigger: GATTGAGGTCAACATTAACAAGAATTTAGTGGGCTC...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGATATATAAATCTTCATTaGTGGGACCACTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SQKPSGCLSDHIYSSSTRYINLH*WDHLLP
Trigger: TGGAAGCAAGTGGTCCCACAAATGAAGATTTATATA...TCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTTATATAAATCTTCATTaGTGGGACCACTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSIYINLH*WDHLLP
Trigger: TGGAAGCAAGTGGTCCCACAAATGAAGATTTATATA...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTTTTCCCAGCTTATATTaGCCTTCAGAGGTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFFPSLY*PSEVSC
Trigger: ACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATACACAGCTTAAATGCTaGCAATGGCTGTTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDTQLKC*QWLFGC
Trigger: ACAACCAAACAGCCATTGCAAGCATTTAAGCTGTGT...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCAATAATGCTCAGGAGATaGGTATTGATGTGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: NQVAVSVITSIHPPQDNAIMLRR*VLMCFA
Trigger: AGCAAAACACATCAATACCAATCTCCTGAGCATTAT...TGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGCCACTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GACCTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTATAATGCTCAGGAGATaGGTATTGATGTGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: DLSERAKNQVAVSVITSIIMLRR*VLMCFA
Trigger: AGCAAAACACATCAATACCAATCTCCTGAGCATTAT...AATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCACTTTATCCAAAATGCTaGGGACCAGAAGCGTTTCAG +
Preference number: 5 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSLYPKC*GPEAFQ
Trigger: CTGAAACGCTTCTGGTCCCAAGCATTTTGGATAAAG...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS TCA 90 bp TACGACTCTGCAGGACCATGTCTAAGAAGGAATATCCTCAAATCCTaGAATATTTCAAACGACTACTTAAGAATGGAGTACATCGACCTC +
Preference number: 5 (lower is better)
Translates to: YDSAGPCLRRNILKS*NISNDYLRMEYIDL
Trigger: GAGGTCGATGTACTCCATTCTTAAGTAGTCGTTTGAAATATTTCAGGATTTGAGGATATTCCTTCTTAGACATGGTCCTGCAGAGTCGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681410.1
CDS-3UTR CAA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTGTAGCTACAGAATCCTaGGATCCTCCAGATCTCACT +
Preference number: 5 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVVATES*DPPDLT
Trigger: AGTGAGATCTGGAGGATCCAAGGATTCTGTAGCTAC...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTTCCCAGCTTATATTTGCCTTCAGAGGTGAGCTGTAGATTACCATCTCTGATGCATCCTCTTCAAACTTaGGACATTCATAATTCCAAC +
Preference number: 5 (lower is better)
Translates to: FPSLYLPSEVSCRLPSLMHPLQT*DIHNSN
Trigger: GTTGGAATTATGAATGTCCAAAGTTTGAAGAGGATG...CATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAATATAAGCTGGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTCTCTGAAAGAGCCAAAAACCAAGTGGCTGTCTCAGTGATCACATCTATTCATCATCCTCTTCAAACTTaGGACATTCATAATTCCAAC +
Preference number: 5 (lower is better)
Translates to: LSERAKNQVAVSVITSIHHPLQT*DIHNSN
Trigger: GTTGGAATTATGAATGTCCAAAGTTTGAAGAGGATG...ATGAATAGATGTGATCACTGAGACAGCCACTTGGTTTTTGGCTCTTTCAGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTATCTGCTGTACTGTTTaGAGGAGAAGGATCAGCTAT +
Preference number: 5 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSICCTV*RRRISY
Trigger: ATAGCTGATCCTTCTCCTCAAAACAGTACAGCAGAT...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACCTTGGTTCAATTCTCTaGGACACATTTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNLGSIL*DTFSSS
Trigger: ACTGGATGAAAATGTGTCCAAGAGAATTGAACCAAG...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCCTTGGTTCAATTCTCTaGGACACATTTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: FLECFSESIFYKRHHQLSLGSIL*DTFSSS
Trigger: ACTGGATGAAAATGTGTCCAAGAGAATTGAACCAAG...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTGGGATATGCTTAGCATaGACTAACTGGATGATCTCA +
Preference number: 5 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFGICLA*TNWMIS
Trigger: TGAGATCATCCAGTTAGTCAATGCTAAGCATATCCC...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGTGCGTCCAGCTATACTaGTATGAAGTTTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQCVQLY*YEVSVD
Trigger: GTCTACAGAAACTTCATACAAGTATAGCTGGACGCA...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCATGCGTCCAGCTATACTaGTATGAAGTTTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSCVQLY*YEVSVD
Trigger: GTCTACAGAAACTTCATACAAGTATAGCTGGACGCA...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCTTTCTCTGTACCCTTaGAAATCATGTTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFLSLYP*KSCSSP
Trigger: TGGGGATGAACATGATTTCAAAGGGTACAGAGAAAG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp ATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGCTTTCTCTGTACCCTTaGAAATCATGTTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: IHRFYVSPLEPNAHVPVQLSLYP*KSCSSP
Trigger: TGGGGATGAACATGATTTCAAAGGGTACAGAGAAAG...CTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTAATACTCGTGAAGTTTaGAAAGTGCTTTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: AVSVITSIHPPQDNALSFNTREV*KVLSLY
Trigger: GTACAGAGAAAGCACTTTCAAAACTTCACGAGTATT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTACTTCTCTGACAACCTaGGCTGGAATGACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVTSLTT*AGMTAS
Trigger: TGAAGCTGTCATTCCAGCCAAGGTTGTCAGAGAAGT...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GCTGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTATACCCTATATTTCTTaGGCATCCTCAAAGCTAAAC +
Preference number: 5 (lower is better)
Translates to: AVSVITSIHPPQDNALSFIPYIS*ASSKLN
Trigger: GTTTAGCTTTGAGGATGCCAAAGAAATATAGGGTAT...AAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATCATCCTCTTCAAACTTaGGACATTCATAATTCCAAC +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDHPLQT*DIHNSN
Trigger: GTTGGAATTATGAATGTCCAAAGTTTGAAGAGGATG...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTCCTGGAATGTTTTTCAGAGTCCATCTTCTACAAGAGACATCATCAGCTTTCCCATCCTCTTCAAACTTaGGACATTCATAATTCCAAC +
Preference number: 5 (lower is better)
Translates to: FLECFSESIFYKRHHQLSHPLQT*DIHNSN
Trigger: GTTGGAATTATGAATGTCCAAAGTTTGAAGAGGATG...GGAAAGCTGATGATGTCTCTTGTAGAAGATGGACTCTGAAAAACATTCCAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287936.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTCTTGGTTCAATTCTCTaGGACACATTTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFLGSIL*DTFSSS
Trigger: ACTGGATGAAAATGTGTCCAAGAGAATTGAACCAAG...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp GTACTTGACAGTCACCCTCATCTAAGCAACATTAAGAGCTCTGATATCTTTAGTCTTGGTTCAATTCTCTaGGACACATTTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: VLDSHPHLSNIKSSDIFSLGSIL*DTFSSS
Trigger: ACTGGATGAAAATGTGTCCAAGAGAATTGAACCAAG...ACTAAAGATATCAGAGCTCTTAATGTTGCTTAGATGAGGGTGACTGTCAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTGTCTGGGACTTTCTTTaGTGTCACTACAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVVWDFL*CHYRRC
Trigger: ACATCTCCTGTAGTGACACAAAAGAAAGTCCCAGAC...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTCACGTCTACAACAATaGTCTGGGACTTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCSRLQQ*SGTFFC
Trigger: ACAAAAGAAAGTCCCAGACAATTGTTGTAGACGTGA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACAATACTCGTGAAGTTTaGAAAGTGCTTTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNNTREV*KVLSLY
Trigger: GTACAGAGAAAGCACTTTCAAAACTTCACGAGTATT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTGAGCCCACTAAATTCTaGTTAATGTTGACCTCAATC +
Preference number: 5 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCEPTKF*LMLTSI
Trigger: GATTGAGGTCAACATTAACAAGAATTTAGTGGGCTC...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509085.5
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCAGAGCCCACTAAATTCTaGTTAATGTTGACCTCAATC +
Preference number: 5 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSEPTKF*LMLTSI
Trigger: GATTGAGGTCAACATTAACAAGAATTTAGTGGGCTC...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAAAAATCCATTTTCAACTGGCAGGAGTGAGGGAGAAGGTCAATTGCACTGATTATATAAATCTTCATTaGTGGGACCACTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LKIHFQLAGVREKVNCTDYINLH*WDHLLP
Trigger: TGGAAGCAAGTGGTCCCACAAATGAAGATTTATATA...ATCAGTGCAATTGACCTTCTCCCTCACTCCTGCCAGTTGAAAATGGATTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACATAATGCTCAGGAGATaGGTATTGATGTGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: HRFYVSPLEPNAHVPVQNIMLRR*VLMCFA
Trigger: AGCAAAACACATCAATACCAATCTCCTGAGCATTAT...GTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp CTCCACAATGAACATAATGCTCAGGAGATTGGTATTGATGTGTTTTGCTCTTCACATCCTCTTCAAACTTaGGACATTCATAATTCCAAC +
Preference number: 5 (lower is better)
Translates to: LHNEHNAQEIGIDVFCSSHPLQT*DIHNSN
Trigger: GTTGGAATTATGAATGTCCAAAGTTTGAAGAGGATG...TGAAGAGCAAAACACATCAATACCAATCTCCTGAGCATTATGTTCATTGTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TGTCTCAGTGATCACATCTATTCATCCTCCACAAGACAATGCATTGAGCTTTTTAATACTCGTGAAGTTTaGAAAGTGCTTTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: CLSDHIYSSSTRQCIELFNTREV*KVLSLY
Trigger: GTACAGAGAAAGCACTTTCAAAACTTCACGAGTATT...AAAAAGCTCAATGCATTGTCTTGTGGAGGATGAATAGATGTGATCACTGAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp AGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCAGAACTGTTATATAAATCTTCATTaGTGGGACCACTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: RFYVSPLEPNAHVPVQNCYINLH*WDHLLP
Trigger: TGGAAGCAAGTGGTCCCACAAATGAAGATTTATATA...ACAGTTCTGAACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS-3UTR CAA 90 bp TTAATTCACAGATTTTATGTTAGTCCTTTAGAACCCAATGCCCATGTTCCAGTTCATCCTCTTCAAACTTaGGACATTCATAATTCCAAC +
Preference number: 5 (lower is better)
Translates to: LIHRFYVSPLEPNAHVPVHPLQT*DIHNSN
Trigger: GTTGGAATTATGAATGTCCAAAGTTTGAAGAGGATG...AACTGGAACATGGGCATTGGGTTCTAAAGGACTAACATAAAATCTGTGAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000511206.5
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS TCA 72 bp TCAAGCCCACCCCGGGACCCCGGGTTACTCCGGCACTaGTGCCGGCCGCCGCTCGGCCTGCCGGGCCTCAAG +
Preference number: 6 (lower is better)
Translates to: SSPPRDPGLLRH*CRPPLGLPGLK
Trigger: CTTGAGGCCCGGCAGGCCGAGCGGCGGCCGGCATCAGTGCCGGAGTAACCCGGGGTCCCGGGGTGGGCTTGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS GCA 72 bp CCGCCGCTCGGCCTGCCGGGCCTCAAGGACATTCCTTaGAGTCCCCGCGGGTCCGAGCTGCCACACCGACAA +
Preference number: 6 (lower is better)
Translates to: PPLGLPGLKDIP*SPRGSELPHRQ
Trigger: TTGTCGGTGTGGCAGCTCGGACCCGCGGGGACTGCAAGGAATGTCCTTGAGGCCCGGCAGGCCGAGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS GCA 72 bp GGTTACTCCGGCACTGATGCCGGCCGCCGCTCGGCCTaGCGGGCCTCAAGGACATTCCTTGCAGTCCCCGCG +
Preference number: 6 (lower is better)
Translates to: GYSGTDAGRRSA*RASRTFLAVPA
Trigger: CGCGGGGACTGCAAGGAATGTCCTTGAGGCCCGGCAGGCCGAGCGGCGGCCGGCATCAGTGCCGGAGTAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS CAA 90 bp CTGATGCCGGCCGCCGCTCGGCCTGCCGGGCCTCAAGGACATTCCTaGCAGTCCCCGCGGGTCCGAGCTGCCACACCGACAAAGCGCAAC +
Preference number: 6 (lower is better)
Translates to: LMPAAARPAGPQGHS*QSPRVRAATPTKRN
Trigger: GTTGCGCTTTGTCGGTGTGGCAGCTCGGACCCGCGGGGACTGCAAGGAATGTCCTTGAGGCCCGGCAGGCCGAGCGGCGGCCGGCATCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS CCA 72 bp CTAGAGGCCACCGAACCCCGGCGCCGACGCTCAGCCTaGCTCCAGTTAACGCAGTCGCGGAGCGGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: LEATEPRRRRSA*LQLTQSRSGRS
Trigger: GCTCCTTCCGCTCCGCGACTGCGTTAACTGGAGCCAGGCTGAGCGTCGGCGCCGGGGTTCGGTGGCCTCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679456.1
ENST00000680160.1
CDS CAA 90 bp GGAGCTGCCGGTAGCCACTTCCCAGGGCCGAGGGAAGCTCCAGAATaGCCACCAACACAGCCCAAACCCCGCTCCCACCCATCTCCGCCC +
Preference number: 6 (lower is better)
Translates to: GAAGSHFPGPREAPE*PPTQPKPRSHPSPP
Trigger: GGGCGGAGATGGGTGGGAGCGGGGTTTGGGCTGTGTTGGTGGCAATTCTGGAGCTTCCCTCGGCCCTGGGAAGTGGCTACCGGCAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS GCA 72 bp TCAAGGACATTCCTTGCAGTCCCCGCGGGTCCGAGCTaGCACACCGACAAAGCGCAACCGCAGCCCCCTCCA +
Preference number: 6 (lower is better)
Translates to: SRTFLAVPAGPS*HTDKAQPQPPP
Trigger: TGGAGGGGGCTGCGGTTGCGCTTTGTCGGTGTGGCAGCTCGGACCCGCGGGGACTGCAAGGAATGTCCTTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681271.1
CDS GCA 72 bp TGGAAGACGCACAACTGGGCCACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGCACCTCCACCAAGCAA +
Preference number: 6 (lower is better)
Translates to: WKTHNWATSHPI*KDSAAGTSTKQ
Trigger: TTGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343975.9
CDS GCA 72 bp TGGAAGACGCACAACTGGGCCACGAGTCATCCCATCTaGAAGGACTCGGCTGCTGGCACCTCCACCAAGCTA +
Preference number: 6 (lower is better)
Translates to: WKTHNWATSHPI*KDSAAGTSTKL
Trigger: TAGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508070.1
CDS GCA 72 bp CTGGGCCACGAGTCATCCCATCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGCTACACAGTATATGTTA +
Preference number: 6 (lower is better)
Translates to: LGHESSHLQGLG*WHLHQATQYML
Trigger: TAACATATACTGTGTAGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508070.1
CDS CCA 72 bp GGCCACGAGTCATCCCATCTGCAAGGACTCGGCTGCTaGCACCTCCACCAAGCAAGGAGTAATTATAATCCC +
Preference number: 6 (lower is better)
Translates to: GHESSHLQGLGC*HLHQARSNYNP
Trigger: GGGATTATAATTACTCCTTGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343975.9
CDS CCA 72 bp GGCCACGAGTCATCCCATCTGCAAGGACTCGGCTGCTaGCACCTCCACCAAGCTACACAGTATATGTTAGAG +
Preference number: 6 (lower is better)
Translates to: GHESSHLQGLGC*HLHQATQYMLE
Trigger: CTCTAACATATACTGTGTAGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508070.1
CDS TCA 72 bp ACATCATGCAGATGGTCAGTGTCACTGTCCCCACTATaGCTTCCCAGGGATGGGAGGCCACAAAGAGGCCAT +
Preference number: 6 (lower is better)
Translates to: TSCRWSVSLSPL*LPRDGRPQRGH
Trigger: ATGGCCTCTTTGTGGCCTCCCATCCCTGGGAAGTCATAGTGGGGACAGTGACACTGACCATCTGCATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000287936.9
ENST00000343975.9
ENST00000509431.1
ENST00000511206.5
ENST00000679456.1
ENST00000680160.1
ENST00000680940.1
ENST00000681271.1
ENST00000681410.1
ENST00000681567.1
CDS GCA 72 bp CTGGGCCACGAGTCATCCCATCTGCAAGGACTCGGCTaGTGGCACCTCCACCAAGCAAGGAGTAATTATAAT +
Preference number: 6 (lower is better)
Translates to: LGHESSHLQGLG*WHLHQARSNYN
Trigger: ATTATAATTACTCCTTGCTTGGTGGAGGTGCCAGCAGCCGAGTCCTTGCAGATGGGATGACTCGTGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343975.9
CDS TCA 72 bp CTATGCCTGATACATCATACCTGCAAACAGGCTTGCTaGGGTAGTAGGTTGGTCCCACCACCCACCGTTCCT +
Preference number: 6 (lower is better)
Translates to: LCLIHHTCKQAC*GSRLVPPPTVP
Trigger: AGGAACGGTGGGTGGTGGGACCAACCTACTACCTCAGCAAGCCTGTTTGCAGGTATGATGTATCAGGCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514315.2
CDS GCA 72 bp AAATGTGCCTCTCCTGCGTCTTCTGTGCGTTCCTTCTaGTCTCCGCCTGGTGCAGGGCTTTATTATGTCTTA +
Preference number: 6 (lower is better)
Translates to: KCASPASSVRSF*SPPGAGLYYVL
Trigger: TAAGACATAATAAAGCCCTGCACCAGGCGGAGAGCAGAAGGAACGCACAGAAGACGCAGGAGAGGCACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS GCA 72 bp GCGACATCCATTGCATACTGGATTCTCTCTGAAATGTaGCTCTCCTGCGTCTTCTGTGCGTTCCTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: ATSIAYWILSEM*LSCVFCAFLLL
Trigger: GAGCAGAAGGAACGCACAGAAGACGCAGGAGAGGCACATTTCAGAGAGAATCCAGTATGCAATGGATGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS GCA 72 bp TCCCAGTCTTACACGCATGCACTTCCCAATCTGTCCTaGAGAACTCCCACATGCAGTATGTGGCATACTACT +
Preference number: 6 (lower is better)
Translates to: SQSYTHALPNLS*RTPTCSMWHTT
Trigger: AGTAGTATGCCACATACTGCATGTGGGAGTTCTGCAGGACAGATTGGGAAGTGCATGCGTGTAAGACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS CCA 72 bp CGTCTCTCTCTCTTGTGTGCGACATCCATTGCATACTaGATTCTCTCTGAAATGTGCCTCTCCTGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: RLSLLCATSIAY*ILSEMCLSCVF
Trigger: GAAGACGCAGGAGAGGCACATTTCAGAGAGAATCCAGTATGCAATGGATGTCGCACACAAGAGAGAGAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS CAA 72 bp GGATCCTGCGTCTCTCTCTCTTGTGTGCGACATCCATaGCATACTGGATTCTCTCTGAAATGTGCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: GSCVSLSCVRHP*HTGFSLKCASP
Trigger: AGGAGAGGCACATTTCAGAGAGAATCCAGTATGCAATGGATGTCGCACACAAGAGAGAGAGACGCAGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS CAA 90 bp AGAATCCTTGGATCCTGCGTCTCTCTCTCTTGTGTGCGACATCCATaGCATACTGGATTCTCTCTGAAATGTGCCTCTCCTGCGTCTTCT +
Preference number: 6 (lower is better)
Translates to: RILGSCVSLSCVRHP*HTGFSLKCASPASS
Trigger: AGAAGACGCAGGAGAGGCACATTTCAGAGAGAATCCAGTATGCAATGGATGTCGCACACAAGAGAGAGAGACGCAGGATCCAAGGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS GCA 72 bp CATGCACTTCCCAATCTGTCCTGCAGAACTCCCACATaGAGTATGTGGCATACTACTTCCTATTATGCCATA +
Preference number: 6 (lower is better)
Translates to: HALPNLSCRTPT*SMWHTTSYYAI
Trigger: TATGGCATAATAGGAAGTAGTATGCCACATACTGCATGTGGGAGTTCTGCAGGACAGATTGGGAAGTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS GCA 72 bp TCCCACATGCAGTATGTGGCATACTACTTCCTATTATaGCATAGACCCAAATCAGCGTTTCTCATTGTCTAC +
Preference number: 6 (lower is better)
Translates to: SHMQYVAYYFLL*HRPKSAFLIVY
Trigger: GTAGACAATGAGAAACGCTGATTTGGGTCTATGGCATAATAGGAAGTAGTATGCCACATACTGCATGTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511206.5
CDS TCA 72 bp ATCCCTAATCCAAAATCCAAACTCCAAATGCTGCAATaGGCATTTTCTTTGAGTGTCAGGTTGGTGCTCAAG +
Preference number: 6 (lower is better)
Translates to: IPNPKSKLQMLQ*AFSLSVRLVLK
Trigger: CTTGAGCACCAACCTGACACTCAAAGAAAATGCTCATTGCAGCATTTGGAGTTTGGATTTTGGATTAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS GCA 72 bp AATCCTTGGATCAGGCTGAGTATCCTTTATCCAAAATaGTTGGGACCAGAAGCGTTTCAGATTTTGGATGTT +
Preference number: 6 (lower is better)
Translates to: NPWIRLSILYPK*LGPEAFQILDV
Trigger: AACATCCAAAATCTGAAACGCTTCTGGTCCCAAGCATTTTGGATAAAGGATACTCAGCCTGATCCAAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS CAA 72 bp CCTTGGATCAGGCTGAGTATCCTTTATCCAAAATGCTaGGGACCAGAAGCGTTTCAGATTTTGGATGTTTTT +
Preference number: 6 (lower is better)
Translates to: PWIRLSILYPKC*GPEAFQILDVF
Trigger: AAAAACATCCAAAATCTGAAACGCTTCTGGTCCCAAGCATTTTGGATAAAGGATACTCAGCCTGATCCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS CAA 90 bp GCATTTTCTTTGAGTGTCAGGTTGGTGCTCAAGAAATTTCAGATTTaGGAGCATTTCGGATTTCAGATCTTCAGATTAGAGACAGTCAAC +
Preference number: 6 (lower is better)
Translates to: AFSLSVRLVLKKFQI*EHFGFQIFRLETVN
Trigger: GTTGACTGTCTCTAATCTGAAGATCTGAAATCCGAAATGCTCCAAAATCTGAAATTTCTTGAGCACCAACCTGACACTCAAAGAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680940.1
CDS GCA 72 bp TTAGAGAAGCAAGCACATGTTACCCAAAAATGCTCATaGTTGACCCAAAAGGTATCACTAATTGTCCTTAAA +
Preference number: 6 (lower is better)
Translates to: LEKQAHVTQKCS*LTQKVSLIVLK
Trigger: TTTAAGGACAATTAGTGATACCTTTTGGGTCAAGCATGAGCATTTTTGGGTAACATGTGCTTGCTTCTCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508070.1
CDS GCA 72 bp TATATGTTAGAGAAGCAAGCACATGTTACCCAAAAATaGTCATGCTTGACCCAAAAGGTATCACTAATTGTC +
Preference number: 6 (lower is better)
Translates to: YMLEKQAHVTQK*SCLTQKVSLIV
Trigger: GACAATTAGTGATACCTTTTGGGTCAAGCATGAGCATTTTTGGGTAACATGTGCTTGCTTCTCTAACATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508070.1
CDS GCA 72 bp GAATGTCTAATTGCCAATAATAAGGAAACTATTCAATaGATGCAGCACACTTTCAGCAATACACATATTTCC +
Preference number: 6 (lower is better)
Translates to: ECLIANNKETIQ*MQHTFSNTHIS
Trigger: GGAAATATGTGTATTGCTGAAAGTGTGCTGCATGCATTGAATAGTTTCCTTATTATTGGCAATTAGACATTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679456.1