RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HMGCL (Homo sapiens)

Ensembl gene IDs: ENSG00000117305

Ensembl transcript IDs: ENST00000235958.4, ENST00000374487.6, ENST00000374490.8, ENST00000436439.6, ENST00000479458.1, ENST00000496907.1, ENST00000498698.1, ENST00000509389.5, ENST00000513148.1

Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCAAGGGCCCCACGGCCATGGCAGGGTGGAGCCGTGTAGAGGGTaGCCAGGTGGCCAGCTCGCGGATTCCATCCAGAGAGGAGACTCA +
Preference number: 1 (lower is better)
Translates to: EQGPHGHGRVEPCRG*PGGQLADSIQRGDS
Trigger: TGAGTCTCCTCTCTGGATGGAATCCGCGAGCTGGCCACCTGGCCACCCTCTACACGGCTCCACCCTGCCATGGCCGTGGGGCCCTTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR GCA 90 bp CTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTaGCCTTCGCCTGCTTTCTGCCAGGAGAGACCTCTGTGTAGAGCT +
Preference number: 1 (lower is better)
Translates to: LLRSGQEVLLPSSSS*PSPAFCQERPLCRA
Trigger: AGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGGGCAGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR CCA 90 bp AACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTaGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTGCCCTTCGCC +
Preference number: 1 (lower is better)
Translates to: NKGRLQPSKPLTPQV*AGGPSAKQLLLPFA
Trigger: GGCGAAGGGCAGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR GCA 90 bp GAGGTCCTTCTGCCAAGCAGCTCCTCCTGCCCTTCGCCTGCTTTCTaGCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCA +
Preference number: 1 (lower is better)
Translates to: EVLLPSSSSCPSPAF*QERPLCRAGYEVPA
Trigger: TGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGGGCAGGAGGAGCTGCTTGGCAGAAGGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR GCA 90 bp GGCAGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTaGCAGCTTGGGAAGAACCTCCATGACCTGTGTCCTGAGAAGTCA +
Preference number: 1 (lower is better)
Translates to: GRRPPRSSPLSTNGL*QLGKNLHDLCPEKS
Trigger: TGACTTCTCAGGACACAGGTCATGGAGGTTCTTCCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR TCA 90 bp AGCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCCCATGTCCCCATCCATaGATCATCTGTGTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: SLSLLRSGQEVLLPSSSSPCPHP*IICVCP
Trigger: GGGGCACACACAGATGATTCATGGATGGGGACATGG...GGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR GCA 90 bp GCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTCCTTCGCCTGCTTTCTaGCAGGAGAGACCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: ASHSSGLGRRSFCQAAPPPSPAF*QERPLC
Trigger: ACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGG...AGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR CCA 90 bp GATTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTGAGCCGTGTAGAGGGTaGCCAGGTGGCCAGCTCGCG +
Preference number: 2 (lower is better)
Translates to: DFPEMLELADGHHVALHFEPCRG*PGGQLA
Trigger: CGCGAGCTGGCCACCTGGCCACCCTCTACACGGCTC...AAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR CCA 90 bp TTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCACGGCCATGGCAGGGTaGAGCCGTGTAGAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: FSRDAGVGRRPPRSSPLSTAMAG*SRVEGG
Trigger: GCCACCCTCTACACGGCTCCACCCTGCCATGGCCGT...GGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR GCA 90 bp CCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCACAACTCCTGCCCTTCGCCTaGTTTCTGCCAGGAGAGACC +
Preference number: 2 (lower is better)
Translates to: PEMLELADGHHVALHFPQLLPFA*FLPGET
Trigger: GGTCTCTCCTGGCAGAAAGCAGGCGAAGGGCAGGAG...TTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR GCA 90 bp TGGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCCAAGCAGCTCCTCCTaGCCTTCGCCTGCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: WARVRNKGRLQPSKPLTPPSSSS*PSPAFC
Trigger: GCAGAAAGCAGGCGAAGGGCAGGAGGAGCTGCTTGG...AGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR CCA 90 bp CACTTTCCACAAATGGCCTCTGCCAGCTTGGGAAGAACCTCCATGACCTGTGTCACGGCCATGGCAGGGTaGAGCCGTGTAGAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: HFPQMASASLGRTSMTCVTAMAG*SRVEGG
Trigger: GCCACCCTCTACACGGCTCCACCCTGCCATGGCCGT...GACACAGGTCATGGAGGTTCTTCCCAAGCTGGCAGAGGCCATTTGTGGAAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR TCA 90 bp CTCAAAGCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCATGTCCCCATCCATaGATCATCTGTGTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: LKASHSSGLGRRSFCQAAPCPHP*IICVCP
Trigger: GGGGCACACACAGATGATTCATGGATGGGGACATGG...AGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR GCA 90 bp GGTGGCCAGCTCGCGGATTCCATCCAGAGAGGAGACTCAAGGATCATGCTAAGTCCAAGCAGCTCCTCCTaGCCTTCGCCTGCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: GGQLADSIQRGDSRIMLSPSSSS*PSPAFC
Trigger: GCAGAAAGCAGGCGAAGGGCAGGAGGAGCTGCTTGG...ACTTAGCATGATCCTTGAGTCTCCTCTCTGGATGGAATCCGCGAGCTGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR CCA 90 bp AGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTGCCAGCTTGGGCAGGCATTCAACTCCTaGGCCAGGGTCCGTAACAAA +
Preference number: 2 (lower is better)
Translates to: RRPPRSSPLSTNGLCQLGQAFNS*ARVRNK
Trigger: TTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTG...CCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR TCA 90 bp CGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCACCATGTCCCCATCCATaGATCATCTGTGTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: RNKGRLQPSKPLTPQVWAPCPHP*IICVCP
Trigger: GGGGCACACACAGATGATTCATGGATGGGGACATGG...TGCCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR-3UTR GCA 90 bp TTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCCCTTCGCCTGCTTTCTaGCAGGAGAGACCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: FSRDAGVGRRPPRSSPLSPSPAF*QERPLC
Trigger: ACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGG...GGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR CAA 90 bp TTCAAAAATCACATTCAGCGTGGAGATTTTCCAGAGATGCTGGAGTaGGCAGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCC +
Preference number: 2 (lower is better)
Translates to: FKNHIQRGDFPEMLE*ADGHHVALHFPQMA
Trigger: GGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAATCTCCACGCTGAATGTGATTTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR CCA 72 bp CCCCACGGCCATGGCAGGGTGGAGCCGTGTAGAGGGTaGCCAGGTGGCCAGCTCGCGGATTCCATCCAGAGA +
Preference number: 3 (lower is better)
Translates to: PHGHGRVEPCRG*PGGQLADSIQR
Trigger: TCTCTGGATGGAATCCGCGAGCTGGCCACCTGGCCACCCTCTACACGGCTCCACCCTGCCATGGCCGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR GCA 72 bp CTGCCAAGCAGCTCCTCCTGCCCTTCGCCTGCTTTCTaGCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAG +
Preference number: 3 (lower is better)
Translates to: LPSSSSCPSPAF*QERPLCRAGYE
Trigger: CTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGGGCAGGAGGAGCTGCTTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR CCA 72 bp AACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTaGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCC +
Preference number: 3 (lower is better)
Translates to: NGVPTRPQAFNS*ARVRNKGRLQP
Trigger: GGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
3UTR GCA 72 bp CCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTaGCAGCTTGGGAAGAACCTCCATGACCTGTGTCCT +
Preference number: 3 (lower is better)
Translates to: PPRSSPLSTNGL*QLGKNLHDLCP
Trigger: AGGACACAGGTCATGGAGGTTCTTCCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp AGGGAACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCGGAGCCGTGTAGAGGGTaGCCAGGTGGCCAGCTCGCG +
Preference number: 4 (lower is better)
Translates to: RERGSHTSSGIQLLGQGPEPCRG*PGGQLA
Trigger: CGCGAGCTGGCCACCTGGCCACCCTCTACACGGCTC...CGGACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp AGGGAACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCGACGGCCATGGCAGGGTaGAGCCGTGTAGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RERGSHTSSGIQLLGQGPTAMAG*SRVEGG
Trigger: GCCACCCTCTACACGGCTCCACCCTGCCATGGCCGT...CGGACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp CTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTGCCCTGTGGCCAAGTTTCCTaGTGCCCCCTGTGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: LTPQVWAGGPSAKQLLLPCGQVS*CPLCVG
Trigger: CCCTACGCACAGGGGGCATCAGGAAACTTGGCCACA...GGGCAGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp AGGGAACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCGCTCCTGCCCTTCGCCTaGTTTCTGCCAGGAGAGACC +
Preference number: 4 (lower is better)
Translates to: RERGSHTSSGIQLLGQGPLLPFA*FLPGET
Trigger: GGTCTCTCCTGGCAGAAAGCAGGCGAAGGGCAGGAG...CGGACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp GCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTCTCCTGCCCTTCGCCTaGTTTCTGCCAGGAGAGACC +
Preference number: 4 (lower is better)
Translates to: ASHSSGLGRRSFCQAAPPLLPFA*FLPGET
Trigger: GGTCTCTCCTGGCAGAAAGCAGGCGAAGGGCAGGAG...AGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp GCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTCCCCAGGGCTTCAGGTaGGCAAGGGGCTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: ASHSSGLGRRSFCQAAPPPQGFR*ARGSEF
Trigger: AAACTCTGAGCCCCTTGCCCACCTGAAGCCCTGGGG...AGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp TGGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTGAGCCGTGTAGAGGGTaGCCAGGTGGCCAGCTCGCG +
Preference number: 4 (lower is better)
Translates to: WARVRNKGRLQPSKPLTPEPCRG*PGGQLA
Trigger: CGCGAGCTGGCCACCTGGCCACCCTCTACACGGCTC...AGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CCTGCTTTCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCAGAGCCGTGTAGAGGGTaGCCAGGTGGCCAGCTCGCG +
Preference number: 4 (lower is better)
Translates to: PAFCQERPLCRAGYEVPAEPCRG*PGGQLA
Trigger: CGCGAGCTGGCCACCTGGCCACCCTCTACACGGCTC...TGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp GGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCTGTGGCCAAGTTTCCTaGTGCCCCCTGTGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: GPGSVTKGDFSPQSLSLLCGQVS*CPLCVG
Trigger: CCCTACGCACAGGGGGCATCAGGAAACTTGGCCACA...GAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp GTAGGGAACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCAGATTCACACCCGTGTaGATGCCCAAGCCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VGNGVPTRPQAFNSWARVRFTPV*MPKPSS
Trigger: GCTAGAGGGCTTGGGCATTCACACGGGTGTGAATCT...GACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTTCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp GTAGGGAACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCCATGTCCCCATCCATaGATCATCTGTGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: VGNGVPTRPQAFNSWARVPCPHP*IICVCP
Trigger: GGGGCACACACAGATGATTCATGGATGGGGACATGG...GACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTTCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp AGGGAACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCGTCACACCCGTGTGAATaGCCAAGCCCTCTAGCATGT +
Preference number: 4 (lower is better)
Translates to: RERGSHTSSGIQLLGQGPSHPCE*PSPLAC
Trigger: ACATGCTAGAGGGCTTGGGCATTCACACGGGTGTGA...CGGACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp GCCCTTCGCCTGCTTTCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGCTCCTGCCCTTCGCCTaGTTTCTGCCAGGAGAGACC +
Preference number: 4 (lower is better)
Translates to: ALRLLSARRDLCVELAMRLLPFA*FLPGET
Trigger: GGTCTCTCCTGGCAGAAAGCAGGCGAAGGGCAGGAG...CCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp CTCAAAGCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCAAGCAGCTCCTCCTaGCCTTCGCCTGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LKASHSSGLGRRSFCQAAPSSSS*PSPAFC
Trigger: GCAGAAAGCAGGCGAAGGGCAGGAGGAGCTGCTTGG...AGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp GCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTGTGTGGTCACCCATCTaGGGAACCCACTTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ASHSSGLGRRSFCQAAPPVWSPI*GTHLGD
Trigger: GTCTCCTAAGTGGGTTCCCCAGATGGGTGACCACAC...AGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp AGGGAACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCGGAGGCACTTCCTGCATaGCAGCAGATAGCATGTCTT +
Preference number: 4 (lower is better)
Translates to: RERGSHTSSGIQLLGQGPEALPA*QQIACL
Trigger: AAGACATGCTATCTGCTGTCATGCAGGAAGTGCCTC...CGGACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp AGCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCACACTCACTCCCATCTaGAGGGCCATCAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SLSLLRSGQEVLLPSSSSTLTPI*RAIKVL
Trigger: CAACACCTTGATGGCCCTGCAGATGGGAGTGAGTGT...GGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp CAGGCATTCAACTCCTGGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCACCAAGCAGCTCCTCCTaGCCTTCGCCTGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QAFNSWARVRNKGRLQPSPSSSS*PSPAFC
Trigger: GCAGAAAGCAGGCGAAGGGCAGGAGGAGCTGCTTGG...TGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp TTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCGTAACAAAGGGAGGGTGCCCACACCAATaGTGTCCCCCAGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: FPHVLRHSTPGPGSVTKGGCPHQ*CPPGRS
Trigger: AGATCTCCCTGGGGGACACCATTGGTGTGGGCACCC...TCCCTTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp AGCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCCTCGTAGCAGCCCATTaGGTAGAACTTCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SLSLLRSGQEVLLPSSSSLVAAH*VELLGD
Trigger: GTCACCAAGAAGTTCTACTCAATGGGCTGCTACGAG...GGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp CGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCATGTGGCCAAGTTTCCTaGTGCCCCCTGTGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: RNKGRLQPSKPLTPQVWACGQVS*CPLCVG
Trigger: CCCTACGCACAGGGGGCATCAGGAAACTTGGCCACA...TGCCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp AGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTGCCAGCTTGGGAGATTCACACCCGTGTaGATGCCCAAGCCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RRPPRSSPLSTNGLCQLGRFTPV*MPKPSS
Trigger: GCTAGAGGGCTTGGGCATTCACACGGGTGTGAATCT...CCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp AGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTGCCAGCTTGGGCCTTCGCCTGCTTTCTaGCAGGAGAGACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RRPPRSSPLSTNGLCQLGPSPAF*QERPLC
Trigger: ACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGG...CCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp TTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCCCAAGCAGCTCCTCCTaGCCTTCGCCTGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FSRDAGVGRRPPRSSPLSPSSSS*PSPAFC
Trigger: GCAGAAAGCAGGCGAAGGGCAGGAGGAGCTGCTTGG...GGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp TTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCAGGGTGCCCACACCAATaGTGTCCCCCAGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: FPEMLELADGHHVALHFPGCPHQ*CPPGRS
Trigger: AGATCTCCCTGGGGGACACCATTGGTGTGGGCACCC...TGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCAGGGTGCCCACACCAATaGTGTCCCCCAGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: RNKGRLQPSKPLTPQVWAGCPHQ*CPPGRS
Trigger: AGATCTCCCTGGGGGACACCATTGGTGTGGGCACCC...TGCCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp GGTGGCCAGCTCGCGGATTCCATCCAGAGAGGAGACTCAAGGATCATGCTAAGTCCCCAGGGCTTCAGGTaGGCAAGGGGCTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: GGQLADSIQRGDSRIMLSPQGFR*ARGSEF
Trigger: AAACTCTGAGCCCCTTGCCCACCTGAAGCCCTGGGG...ACTTAGCATGATCCTTGAGTCTCCTCTCTGGATGGAATCCGCGAGCTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp TCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCACCATTTAACGGCCATGGCAGGGTaGAGCCGTGTAGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SARRDLCVELAMRYLHHLTAMAG*SRVEGG
Trigger: GCCACCCTCTACACGGCTCCACCCTGCCATGGCCGT...TAAATGGTGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CTCAAAGCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTGTGTGGTCACCCATCTaGGGAACCCACTTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LKASHSSGLGRRSFCQAAVWSPI*GTHLGD
Trigger: GTCTCCTAAGTGGGTTCCCCAGATGGGTGACCACAC...AGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCTTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp AGGGAACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCGATGCCAGGAAACTTCTaGATGCCCTTCAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: RERGSHTSSGIQLLGQGPMPGNF*MPFKTS
Trigger: TGAAGTCTTGAAGGGCATTCAGAAGTTTCCTGGCAT...CGGACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp CCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCACAAACAGCCTCCAAGTCCTaGCACAGAAGAGTCCACGAC +
Preference number: 4 (lower is better)
Translates to: PEMLELADGHHVALHFPQTASKS*HRRVHD
Trigger: GTCGTGGACTCTTCTGTGGCAGGACTTGGAGGCTGT...TTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp CTCAAAGCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTTCCACAAATGGCCTCTaGCAGCTTGGGAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: LKASHSSGLGRRSFCQAASTNGL*QLGKNL
Trigger: GAGGTTCTTCCCAAGCTGGCAGAGGCCATTTGTGGA...AGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp AGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTGCCAGCTTGGGAAGCGCCTTCCTCATTaGTGCCATCTTGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: RRPPRSSPLSTNGLCQLGKRLPH*CHLGPE
Trigger: TTCTGGGCCAAGATGGCAGCAATGAGGAAGGCGCTT...CCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CCTGCTTTCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCAGGGCCATCAAGGTGTTaGCCAGGGCTTGACCATAGG +
Preference number: 4 (lower is better)
Translates to: PAFCQERPLCRAGYEVPAGPSRC*PGLDHR
Trigger: CCTATGGTCAAGCCCTGGCCAACACCTTGATGGCCC...TGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp GGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCCAGGCATTCAACTCCTaGGCCAGGGTCCGTAACAAA +
Preference number: 4 (lower is better)
Translates to: GPGSVTKGDFSPQSLSLLQAFNS*ARVRNK
Trigger: TTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTG...GAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTGCCCCTCAGCTACTTTAGCTaGGGAGATCTTCCCTTCATA +
Preference number: 4 (lower is better)
Translates to: LTPQVWAGGPSAKQLLLPLSYFS*GDLPFI
Trigger: TATGAAGGGAAGATCTCCCCAGCTAAAGTAGCTGAG...GGGCAGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS-3UTR TCA 90 bp AGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTGCCAGCTTGGGCTCGTAGCAGCCCATTaGGTAGAACTTCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RRPPRSSPLSTNGLCQLGLVAAH*VELLGD
Trigger: GTCACCAAGAAGTTCTACTCAATGGGCTGCTACGAG...CCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp TGGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTACACTCACTCCCATCTaGAGGGCCATCAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: WARVRNKGRLQPSKPLTPTLTPI*RAIKVL
Trigger: CAACACCTTGATGGCCCTGCAGATGGGAGTGAGTGT...AGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp TTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCACCTTCGCCTGCTTTCTaGCAGGAGAGACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FPEMLELADGHHVALHFPPSPAF*QERPLC
Trigger: ACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGG...TGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CTCAAAGCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTTCCACTTTCCACAAATaGCCTCTGCCAGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LKASHSSGLGRRSFCQAASTFHK*PLPAWE
Trigger: TTCCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGA...AGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCTTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp GGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCTTCAAGACTTCAGTGTaGTCACCCATCTGGGGAACC +
Preference number: 4 (lower is better)
Translates to: GPGSVTKGDFSPQSLSLLFKTSV*SPIWGT
Trigger: GGTTCCCCAGATGGGTGACCACACTGAAGTCTTGAA...GAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp CCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCACAACTCGTAGCAGCCCATTaGGTAGAACTTCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: PEMLELADGHHVALHFPQLVAAH*VELLGD
Trigger: GTCACCAAGAAGTTCTACTCAATGGGCTGCTACGAG...TTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp GGTGGCCAGCTCGCGGATTCCATCCAGAGAGGAGACTCAAGGATCATGCTAAGTATAGCATGTCTTTCATaGTCCCTGGGGTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GGQLADSIQRGDSRIMLSIACLS*SLGCPH
Trigger: GTGTGGGCACCCCAGGGATCATGAAAGACATGCTAT...ACTTAGCATGATCCTTGAGTCTCCTCTCTGGATGGAATCCGCGAGCTGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp CCTGCTTTCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCAACACTCACTCCCATCTaGAGGGCCATCAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PAFCQERPLCRAGYEVPATLTPI*RAIKVL
Trigger: CAACACCTTGATGGCCCTGCAGATGGGAGTGAGTGT...TGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp CACTTTCCACAAATGGCCTCTGCCAGCTTGGGAAGAACCTCCATGACCTGTGTCACAGCCTCCAAGTCCTaGCACAGAAGAGTCCACGAC +
Preference number: 4 (lower is better)
Translates to: HFPQMASASLGRTSMTCVTASKS*HRRVHD
Trigger: GTCGTGGACTCTTCTGTGGCAGGACTTGGAGGCTGT...GACACAGGTCATGGAGGTTCTTCCCAAGCTGGCAGAGGCCATTTGTGGAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp CCTGCTTTCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCATCACACCCGTGTGAATaGCCAAGCCCTCTAGCATGT +
Preference number: 4 (lower is better)
Translates to: PAFCQERPLCRAGYEVPASHPCE*PSPLAC
Trigger: ACATGCTAGAGGGCTTGGGCATTCACACGGGTGTGA...TGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp TTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCTCCACAAATGGCCTCTaGCAGCTTGGGAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: FSRDAGVGRRPPRSSPLSSTNGL*QLGKNL
Trigger: GAGGTTCTTCCCAAGCTGGCAGAGGCCATTTGTGGA...GGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp CAGGCATTCAACTCCTGGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCATCCAGCAGCAACCGCTaGCTCGAAGCCTTTCAAATT +
Preference number: 4 (lower is better)
Translates to: QAFNSWARVRNKGRLQPSSSSNR*LEAFQI
Trigger: AATTTGAAAGGCTTCGAGGCAGCGGTTGCTGCTGGA...TGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS-3UTR GCA 90 bp CCTGCTTTCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCAAAGCGCCTTCCTCATTaGTGCCATCTTGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PAFCQERPLCRAGYEVPAKRLPH*CHLGPE
Trigger: TTCTGGGCCAAGATGGCAGCAATGAGGAAGGCGCTT...TGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp GGTGGCCAGCTCGCGGATTCCATCCAGAGAGGAGACTCAAGGATCATGCTAAGTGTCTTTCATGATCCCTaGGGTGCCCACACCAATGGT +
Preference number: 4 (lower is better)
Translates to: GGQLADSIQRGDSRIMLSVFHDP*GAHTNG
Trigger: ACCATTGGTGTGGGCACCCCAGGGATCATGAAAGAC...ACTTAGCATGATCCTTGAGTCTCCTCTCTGGATGGAATCCGCGAGCTGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp ATCCATGAATCATCTGTGTGTGCCCCTATTTCCACATCATCCCCAGGGCTTCAGCCCCAGGGCTTCAGGTaGGCAAGGGGCTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: IHESSVCAPISTSSPGLQPQGFR*ARGSEF
Trigger: AAACTCTGAGCCCCTTGCCCACCTGAAGCCCTGGGG...CTGAAGCCCTGGGGATGATGTGGAAATAGGGGCACACACAGATGATTCATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCACAGGCATTCAACTCCTaGGCCAGGGTCCGTAACAAA +
Preference number: 4 (lower is better)
Translates to: RNKGRLQPSKPLTPQVWAQAFNS*ARVRNK
Trigger: TTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTG...TGCCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp GGTGGCCAGCTCGCGGATTCCATCCAGAGAGGAGACTCAAGGATCATGCTAAGTCAGGCATTCAACTCCTaGGCCAGGGTCCGTAACAAA +
Preference number: 4 (lower is better)
Translates to: GGQLADSIQRGDSRIMLSQAFNS*ARVRNK
Trigger: TTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTG...ACTTAGCATGATCCTTGAGTCTCCTCTCTGGATGGAATCCGCGAGCTGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp AGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTGCCAGCTTGGGATTTGGGGTCAGGACTaGGTAGTTGATGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RRPPRSSPLSTNGLCQLGIWGQD*VVDARK
Trigger: TTTCCTGGCATCAACTACCCAGTCCTGACCCCAAAT...CCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCACCCGCACAGAAATATTaGCTGACTGCGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RNKGRLQPSKPLTPQVWAPAQKY*LTALPS
Trigger: TGAAGGCAGCGCAGTCAGCCAATATTTCTGTGCGGG...TGCCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS-3UTR TCA 90 bp CGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCAGAGGCACTTCCTGCATaGCAGCAGATAGCATGTCTT +
Preference number: 4 (lower is better)
Translates to: RNKGRLQPSKPLTPQVWAEALPA*QQIACL
Trigger: AAGACATGCTATCTGCTGTCATGCAGGAAGTGCCTC...TGCCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp TCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCACCATTTAAGATTCACACCCGTGTaGATGCCCAAGCCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SARRDLCVELAMRYLHHLRFTPV*MPKPSS
Trigger: GCTAGAGGGCTTGGGCATTCACACGGGTGTGAATCT...TAAATGGTGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp CGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCACACAGAAATATTGGCTaGCTGCGCTGCCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RNKGRLQPSKPLTPQVWAHRNIG*LRCLQD
Trigger: ATCCTGAAGGCAGCGCAGTCAGCCAATATTTCTGTG...TGCCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS-3UTR GCA 90 bp CTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTGCCCTATAACAGAGAGTCCTaGTTCAGAAAGCATGTCTAT +
Preference number: 4 (lower is better)
Translates to: LTPQVWAGGPSAKQLLLPYNRES*FRKHVY
Trigger: ATAGACATGCTTTCTGAAGCAGGACTCTCTGTTATA...GGGCAGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp TCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGTCCACTTTCCACAAATaGCCTCTGCCAGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SVTKGDFSPQSLSLLRSGSTFHK*PLPAWE
Trigger: TTCCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGA...CCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCATTCAAGACTTCAGTGTaGTCACCCATCTGGGGAACC +
Preference number: 4 (lower is better)
Translates to: RNKGRLQPSKPLTPQVWAFKTSV*SPIWGT
Trigger: GGTTCCCCAGATGGGTGACCACACTGAAGTCTTGAA...TGCCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp GGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCGAAGCCTTTCAAATTTaGGGTCAGGACTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GPGSVTKGDFSPQSLSLLEAFQI*GQDWVV
Trigger: AACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTC...GAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp CCTGCTTTCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCAAGTTTACAGGTAGCCTaGGCCACTTTGGAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: PAFCQERPLCRAGYEVPASLQVA*ATLELV
Trigger: AACTAGCTCCAAAGTGGCTCAGGCTACCTGTAAACT...TGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp TCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGAGTTTACAGGTAGCCTaGGCCACTTTGGAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: SVTKGDFSPQSLSLLRSGSLQVA*ATLELV
Trigger: AACTAGCTCCAAAGTGGCTCAGGCTACCTGTAAACT...CCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp CAGGCATTCAACTCCTGGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCAATGCCAGGAAACTTCTaGATGCCCTTCAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: QAFNSWARVRNKGRLQPSMPGNF*MPFKTS
Trigger: TGAAGTCTTGAAGGGCATTCAGAAGTTTCCTGGCAT...TGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp ATCCATGAATCATCTGTGTGTGCCCCTATTTCCACATCATCCCCAGGGCTTCAGCCTTCGCCTGCTTTCTaGCAGGAGAGACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IHESSVCAPISTSSPGLQPSPAF*QERPLC
Trigger: ACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGG...CTGAAGCCCTGGGGATGATGTGGAAATAGGGGCACACACAGATGATTCATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR GCA 90 bp CACTTTCCACAAATGGCCTCTGCCAGCTTGGGAAGAACCTCCATGACCTGTGTCGAAATATTGGCTGACTaGGCTGCCTTCAGGATTGCG +
Preference number: 4 (lower is better)
Translates to: HFPQMASASLGRTSMTCVEILAD*AAFRIA
Trigger: CGCAATCCTGAAGGCAGCGCAGTCAGCCAATATTTC...GACACAGGTCATGGAGGTTCTTCCCAAGCTGGCAGAGGCCATTTGTGGAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS-3UTR GCA 90 bp TTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCCTTCTTGGTGACCGCTaGCTCGAAGCCTTTCAAATT +
Preference number: 4 (lower is better)
Translates to: FSRDAGVGRRPPRSSPLSLLGDR*LEAFQI
Trigger: AATTTGAAAGGCTTCGAGGCAGCGGTCACCAAGAAG...GGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436439.6
CDS-3UTR CCA 90 bp CCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCACAAGAAGCCTTTCAAATTTaGGGTCAGGACTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: PEMLELADGHHVALHFPQEAFQI*GQDWVV
Trigger: AACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTC...TTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCCCCATCGGGCCATCAAGGTGTTaGCCAGGGCTTGACCATAGG +
Preference number: 4 (lower is better)
Translates to: LAMRYLHHLTYSHFHVPIGPSRC*PGLDHR
Trigger: CCTATGGTCAAGCCCTGGCCAACACCTTGATGGCCC...GATGGGGACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp TTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCATTTCTGTTCAGGGCTTaGCAGATAAAGTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FPEMLELADGHHVALHFPFLFRA*QIKFPA
Trigger: AGCTGGAAACTTTATCTGTCAAGCCCTGAACAGAAA...TGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp GGTGGCCAGCTCGCGGATTCCATCCAGAGAGGAGACTCAAGGATCATGCTAAGTTTTCTGTTCAGGGCTTaGCAGATAAAGTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGQLADSIQRGDSRIMLSFLFRA*QIKFPA
Trigger: AGCTGGAAACTTTATCTGTCAAGCCCTGAACAGAAA...ACTTAGCATGATCCTTGAGTCTCCTCTCTGGATGGAATCCGCGAGCTGGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp GGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCCCCATCCACCATGTCCCCATCCATaGATCATCTGTGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GYEVPAPFNLFSFPCPHPPCPHP*IICVCP
Trigger: GGGGCACACACAGATGATTCATGGATGGGGACATGG...TGGATGGGGACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CAGGCATTCAACTCCTGGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCAAAATCACATTCAGCGTaGAGATTTTCCAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: QAFNSWARVRNKGRLQPSKSHSA*RFSRDA
Trigger: AGCATCTCTGGAAAATCTCCACGCTGAATGTGATTT...TGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp AGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCAAGGCAGCTCCAAAGATaGCTACTTCCTTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RPLCRAGYEVPAPFNLFSRQLQR*LLPWLQ
Trigger: CTGGAGCCAAGGAAGTAGTCATCTTTGGAGCTGCCT...TGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS-3UTR TCA 90 bp GATTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTATTGCGTCAAACCTCTaGAAACTCTCCTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: DFPEMLELADGHHVALHFIASNL*KLSSME
Trigger: TTCCATAGAGGAGAGTTTTCAGAGGTTTGACGCAAT...AAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS-3UTR GCA 90 bp GGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCCCCATCCATCCACAAATGGCCTCTaGCAGCTTGGGAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: GYEVPAPFNLFSFPCPHPSTNGL*QLGKNL
Trigger: GAGGTTCTTCCCAAGCTGGCAGAGGCCATTTGTGGA...TGGATGGGGACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp AGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCAGTCTTTCATGATCCCTaGGGTGCCCACACCAATGGT +
Preference number: 4 (lower is better)
Translates to: RPLCRAGYEVPAPFNLFSVFHDP*GAHTNG
Trigger: ACCATTGGTGTGGGCACCCCAGGGATCATGAAAGAC...TGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp TGTAGAGCTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTGGGCCATCAAGGTGTTaGCCAGGGCTTGACCATAGG +
Preference number: 4 (lower is better)
Translates to: CRAGYEVPAPFNLFSFPCGPSRC*PGLDHR
Trigger: CCTATGGTCAAGCCCTGGCCAACACCTTGATGGCCC...ACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAGCTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp AGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTGCCAGCTTGGGCAGCTTGATTTTCACTaGAGTAGATACGATATTCTT +
Preference number: 4 (lower is better)
Translates to: RRPPRSSPLSTNGLCQLGQLDFH*SRYDIL
Trigger: AAGAATATCGTATCTACTCCAGTGAAAATCAAGCTG...CCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp GGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCCCCATCCAGAGGCACTTCCTGCATaGCAGCAGATAGCATGTCTT +
Preference number: 4 (lower is better)
Translates to: GYEVPAPFNLFSFPCPHPEALPA*QQIACL
Trigger: AAGACATGCTATCTGCTGTCATGCAGGAAGTGCCTC...TGGATGGGGACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp TCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCACCATTTATTTCTGTTCAGGGCTTaGCAGATAAAGTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SARRDLCVELAMRYLHHLFLFRA*QIKFPA
Trigger: AGCTGGAAACTTTATCTGTCAAGCCCTGAACAGAAA...TAAATGGTGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp ATTTCCATGTCCCCATCCATGAATCATCTGTGTGTGCCCCTATTTCCACATCATCTTGGTGAAGAGCTCTaGGGCAGCTCCAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: ISMSPSMNHLCVPLFPHHLGEEL*GSSKDD
Trigger: GTCATCTTTGGAGCTGCCTCAGAGCTCTTCACCAAG...ATGATGTGGAAATAGGGGCACACACAGATGATTCATGGATGGGGACATGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS-3UTR GCA 90 bp TCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGTATAACAGAGAGTCCTaGTTCAGAAAGCATGTCTAT +
Preference number: 4 (lower is better)
Translates to: SVTKGDFSPQSLSLLRSGYNRES*FRKHVY
Trigger: ATAGACATGCTTTCTGAAGCAGGACTCTCTGTTATA...CCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp GGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCCCCATCCATCCACTTTCCACAAATaGCCTCTGCCAGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GYEVPAPFNLFSFPCPHPSTFHK*PLPAWE
Trigger: TTCCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGA...TGGATGGGGACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp AGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCAAGTTTACAGGTAGCCTaGGCCACTTTGGAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: RPLCRAGYEVPAPFNLFSSLQVA*ATLELV
Trigger: AACTAGCTCCAAAGTGGCTCAGGCTACCTGTAAACT...TGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp TCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCAGCTTGATTTTCACTaGAGTAGATACGATATTCTT +
Preference number: 4 (lower is better)
Translates to: SVTKGDFSPQSLSLLRSGQLDFH*SRYDIL
Trigger: AAGAATATCGTATCTACTCCAGTGAAAATCAAGCTG...CCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp CTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCCCCATCATTTGGGGTCAGGACTaGGTAGTTGATGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LAMRYLHHLTYSHFHVPIIWGQD*VVDARK
Trigger: TTTCCTGGCATCAACTACCCAGTCCTGACCCCAAAT...GATGGGGACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR TCA 90 bp ATCCATGAATCATCTGTGTGTGCCCCTATTTCCACATCATCCCCAGGGCTTCAGAGTAGAACTTCTTGGTaGCCTTTTCATTTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: IHESSVCAPISTSSPGLQSRTSW*PFHFVV
Trigger: GACTACAAAATGAAAAGGTCACCAAGAAGTTCTACT...CTGAAGCCCTGGGGATGATGTGGAAATAGGGGCACACACAGATGATTCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000235958.4
CDS-3UTR CCA 90 bp AGACCTCTGTGTAGAGCTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCAAAATCACATTCAGCGTaGAGATTTTCCAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: RPLCRAGYEVPAPFNLFSKSHSA*RFSRDA
Trigger: AGCATCTCTGGAAAATCTCCACGCTGAATGTGATTT...TGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAGCTCTACACAGAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CCA 90 bp ATTTCCATGTCCCCATCCATGAATCATCTGTGTGTGCCCCTATTTCCACATCATAAATCACATTCAGCGTaGAGATTTTCCAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: ISMSPSMNHLCVPLFPHHKSHSA*RFSRDA
Trigger: AGCATCTCTGGAAAATCTCCACGCTGAATGTGATTT...ATGATGTGGAAATAGGGGCACACACAGATGATTCATGGATGGGGACATGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS CCA 90 bp GCACGCCAGCAGGCCGCTGACCAGCAGAACGACGCAGAGTTTGGCTaGGACTGTGGAAGGGGGTCCCGGGCTGCTGAGTGGCCCCACTCC +
Preference number: 5 (lower is better)
Translates to: ARQQAADQQNDAEFG*DCGRGSRAAEWPHS
Trigger: GGAGTGGGGCCACTCAGCAGCCCGGGACCCCCTTCCACAGTCCCAGCCAAACTCTGCGTCGTTCTGCTGGTCAGCGGCCTGCTGGCGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS TCA 90 bp GTCCAGAGGAGCACATCAGCAGGCACTGGCACGCCAGCAGGCCGCTaGCCAGCAGAACGACGCAGAGTTTGGCTGGGACTGTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: VQRSTSAGTGTPAGR*PAERRRVWLGLWKG
Trigger: CCCCTTCCACAGTCCCAGCCAAACTCTGCGTCGTTCTGCTGGTCAGCGGCCTGCTGGCGTGCCAGTGCCTGCTGATGTGCTCCTCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS CCA 90 bp CCGGACATGGAGAGGAGCACATCAGTGGAGGAACACACAGGCGGCTaGACGTCCAGAGGAGCACATCAGCAGGCACTGGCACGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PDMERSTSVEEHTGG*TSRGAHQQALARQQ
Trigger: CTGCTGGCGTGCCAGTGCCTGCTGATGTGCTCCTCTGGACGTCCAGCCGCCTGTGTGTTCCTCCACTGATGTGCTCCTCTCCATGTCCGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS CCA 90 bp ATAAATGAAATGGTGACGTCGCTTCCCCAGTGGCCCTGCAGAGTGTaGGGCGGCAGTGGCTGGCCTTTAGGGGGCAGCAGGGTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: INEMVTSLPQWPCRV*GGSGWPLGGSRVQG
Trigger: CCCCTGCACCCTGCTGCCCCCTAAAGGCCAGCCACTGCCGCCCCACACTCTGCAGGGCCACTGGGGAAGCGACGTCACCATTTCATTTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS GCA 90 bp TTCGGGGCTGTCGCCACCAGGGGGTGGGTGGGCTTACCGTGTGAATaGCCAAGCCCTCTAGCATGTAGACCAGGTCTTCTGTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: FGAVATRGWVGLPCE*PSPLACRPGLLWPS
Trigger: ACTTGGCCACAGAAGACCTGGTCTACATGCTAGAGGGCTTGGGCATTCACACGGTAAGCCCACCCACCCCCTGGTGGCGACAGCCCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS CCA 90 bp GGCCAGGTTTGCCCCAGGGTCTGGCTGACAGACAAGCTATTCAGATaGACATCCCAGGACAGGGGACTGAGGCGCCAAGACAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GQVCPRVWLTDKLFR*TSQDRGLRRQDKAG
Trigger: CCCTGCCTTGTCTTGGCGCCTCAGTCCCCTGTCCTGGGATGTCCATCTGAATAGCTTGTCTGTCAGCCAGACCCTGGGGCAAACCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498698.1
CDS-3UTR CAA 90 bp AGACGGCCACCACGTAGCTCTCCACTTTCCACAAATGGCCTCTGCCAGCTTGGGGGTGTTGGCCAGGGCTaGACCATAGGTGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: RRPPRSSPLSTNGLCQLGGVGQG*TIGVMA
Trigger: TGCCATGACACCTATGGTCAAGCCCTGGCCAACACC...CCCAAGCTGGCAGAGGCCATTTGTGGAAAGTGGAGAGCTACGTGGTGGCCGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp CAGGCATTCAACTCCTGGGCCAGGGTCCGTAACAAAGGGAGACTTCAGCCCTCACCAGAGATGCTGGAGTaGGCAGACGGCCACCACGTA +
Preference number: 5 (lower is better)
Translates to: QAFNSWARVRNKGRLQPSPEMLE*ADGHHV
Trigger: TACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGG...TGAGGGCTGAAGTCTCCCTTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp GCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTCCTCCTAAGATGACTACTTCCTaGGCTCCAGCAGCAACCGCT +
Preference number: 5 (lower is better)
Translates to: ASHSSGLGRRSFCQAAPPKMTTS*APAATA
Trigger: AGCGGTTGCTGCTGGAGCCAAGGAAGTAGTCATCTT...AGGAGGAGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS CCA 90 bp CCGTGTGAATGCCCAAGCCCTCTAGCATGTAGACCAGGTCTTCTGTaGCCAAGTTTCCTGATGCCCCCTGTGCGTAGGGACAGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: PCECPSPLACRPGLL*PSFLMPPVRRDSLQ
Trigger: TTGGAGGCTGTCCCTACGCACAGGGGGCATCAGGAAACTTGGCCACAGAAGACCTGGTCTACATGCTAGAGGGCTTGGGCATTCACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000235958.4
ENST00000374487.6
ENST00000374490.8
ENST00000436439.6
ENST00000509389.5
CDS-3UTR CAA 90 bp TTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCGTAACAAAGGGAATGGCCTCTGCCAGCTaGGGAAGAACCTCCATGACC +
Preference number: 5 (lower is better)
Translates to: FPHVLRHSTPGPGSVTKGMASAS*GRTSMT
Trigger: GGTCATGGAGGTTCTTCCCAAGCTGGCAGAGGCCAT...TCCCTTTGTTACGGACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp TCCGTAACAAAGGGAGACTTCAGCCCTCAAAGCCTCTCACTCCTCAGGTCTGGGCCAGAGATGCTGGAGTaGGCAGACGGCCACCACGTA +
Preference number: 5 (lower is better)
Translates to: SVTKGDFSPQSLSLLRSGPEMLE*ADGHHV
Trigger: TACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGG...CCCAGACCTGAGGAGTGAGAGGCTTTGAGGGCTGAAGTCTCCCTTTGTTACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp GTAGGGAACGGGGTTCCCACACGTCCTCAGGCATTCAACTCCTGGGCCAGGGTCCGAAGCCTTTCAAATTaGGGGTCAGGACTGGGTAGT +
Preference number: 5 (lower is better)
Translates to: VGNGVPTRPQAFNSWARVRSLSN*GSGLGS
Trigger: ACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCG...GACCCTGGCCCAGGAGTTGAATGCCTGAGGACGTGTGGGAACCCCGTTCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS GCA 90 bp GGCAGCAGGGTGCAGGGGAAGGAGCAGGCCTTTGAAGTCACGAGATaGTGGGTTAAAGTCCTAGTTCTGCTGTTCACTAGCTGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GSRVQGKEQAFEVTR*WVKVLVLLFTSCGP
Trigger: AGGCCCACAGCTAGTGAACAGCAGAACTAGGACTTTAACCCAGCATCTCGTGACTTCAAAGGCCTGCTCCTTCCCCTGCACCCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 90 bp CTAGGTGTGGAGCTCAGGCTGCCCCCACCCAGGATAAGAAGTTTGTaGCAGGAGGACCACTTGAGTCAGAGTCTAGCCCCATTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: LGVELRLPPPRIRSL*QEDHLSQSLAPFQN
Trigger: GTTCTGGAATGGGGCTAGACTCTGACTCAAGTGGTCCTCCTGCCACAAACTTCTTATCCTGGGTGGGGGCAGCCTGAGCTCCACACCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479458.1
CDS CCA 90 bp ATGCTATTCTGCTTCCGTCCCGCCACTGAGGGCCCTGGTGGACTCTaGCGGATCCCTGGTGAGCTGTCTAACGCTACTGTCCTCATTTTA +
Preference number: 5 (lower is better)
Translates to: MLFCFRPATEGPGGL*RIPGELSNATVLIL
Trigger: TAAAATGAGGACAGTAGCGTTAGACAGCTCACCAGGGATCCGCCAGAGTCCACCAGGGCCCTCAGTGGCGGGACGGAAGCAGAATAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS-3UTR CAA 90 bp GATTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCAGAGATGCTGGAGTaGGCAGACGGCCACCACGTA +
Preference number: 5 (lower is better)
Translates to: DFPEMLELADGHHVALHFPEMLE*ADGHHV
Trigger: TACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGG...AAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp TTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCAGAAGCGCCTTCCTCATaGCTGCCATCTTGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: FPEMLELADGHHVALHFPEAPSS*LPSWPR
Trigger: TCTGGGCCAAGATGGCAGCAATGAGGAAGGCGCTTC...TGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp TTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCGAAGCGCCTTCCTCATaGCTGCCATCTTGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: FSRDAGVGRRPPRSSPLSEAPSS*LPSWPR
Trigger: TCTGGGCCAAGATGGCAGCAATGAGGAAGGCGCTTC...GGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS CCA 90 bp AGCAGGGTGCAGGGGAAGGAGCAGGCCTTTGAAGTCACGAGATGCTaGGTTAAAGTCCTAGTTCTGCTGTTCACTAGCTGTGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SRVQGKEQAFEVTRC*VKVLVLLFTSCGPW
Trigger: CCAAGGCCCACAGCTAGTGAACAGCAGAACTAGGACTTTAACCCAGCATCTCGTGACTTCAAAGGCCTGCTCCTTCCCCTGCACCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 90 bp CAGGGCAGCCAGAGGCACTTCCGCTGCCTCGAAGCCTTTCAAATTTaGGGTCAGGACTGGGTAGTTGATGCCAGGAAACTTCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: QGSQRHFRCLEAFQI*GQDWVVDARKLLNA
Trigger: GGCATTCAGAAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGAAGTGCCTCTGGCTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS GCA 90 bp GTCAACTTGTCAAGATCACAGAGCAGTGAGTGGCAGGGCCAGGTTTaGCCCAGGGTCTGGCTGACAGACAAGCTATTCAGATGGACATCC +
Preference number: 5 (lower is better)
Translates to: VNLSRSQSSEWQGQV*PRVWLTDKLFRWTS
Trigger: GGATGTCCATCTGAATAGCTTGTCTGTCAGCCAGACCCTGGGGCAAACCTGGCCCTGCCACTCACTGCTCTGTGATCTTGACAAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498698.1
CDS-3UTR CAA 90 bp TTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCAGCGCTGCCTTCAGGATaGCGTCAAACCTCTGAAAAC +
Preference number: 5 (lower is better)
Translates to: FPEMLELADGHHVALHFPALPSG*RQTSEN
Trigger: GTTTTCAGAGGTTTGACGCAATCCTGAAGGCAGCGC...TGGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS TCA 90 bp AGCCCCATTCCAGAACGGTACAGAGGAAAGGATACCAATGTGCTCTaGCTCACCCCCGCACAGAAATATTGGCTGACTGCGCTGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SPIPERYRGKDTNVL*LTPAQKYWLTALPS
Trigger: TGAAGGCAGCGCAGTCAGCCAATATTTCTGTGCGGGGGTGAGTCAGAGCACATTGGTATCCTTTCCTCTGTACCGTTCTGGAATGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479458.1
CDS TCA 90 bp TCCATGTTCCTGGTGTCTCCTAGGACTGAACTGTCAAAGTCACCCTaGCACTCCAGCCTTCTTATGCCCATGCGTGTGGCCTCACTCAAC +
Preference number: 5 (lower is better)
Translates to: SMFLVSPRTELSKSP*HSSLLMPMRVASLN
Trigger: GTTGAGTGAGGCCACACGCATGGGCATAAGAAGGCTGGAGTGTCAGGGTGACTTTGACAGTTCAGTCCTAGGAGACACCAGGAACATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS CCA 90 bp TTCCTTGGCTCCAGCAGCAACCGCTGCCTCGAAGCCTTTCAAATTTaGGGTCAGGACTGGGTAGTTGATGCCAGGAAACTTCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: FLGSSSNRCLEAFQI*GQDWVVDARKLLNA
Trigger: GGCATTCAGAAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGTTGCTGCTGGAGCCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000479458.1
ENST00000513148.1
CDS CCA 90 bp CAGGGTTGTGGCCTTTCAATCACTACAAGGAACTATGGGAACTCCTaGGTAAGGAGCCCCTCCTCAGAGAATCACCTCAACGACCAGACT +
Preference number: 5 (lower is better)
Translates to: QGCGLSITTRNYGNS*VRSPSSENHLNDQT
Trigger: AGTCTGGTCGTTGAGGTGATTCTCTGAGGAGGGGCTCCTTACCCAGGAGTTCCCATAGTTCCTTGTAGTGATTGAAAGGCCACAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 90 bp CCCTTTGGTCATACGGCAAGGATTGTGGCAACTGAGGCTAAGACCTaGAGCAGGGCAGCTGCTCTCAAGAAACAGTTGCTACTGTTACCA +
Preference number: 5 (lower is better)
Translates to: PFGHTARIVATEAKT*SRAAALKKQLLLLP
Trigger: TGGTAACAGTAGCAACTGTTTCTTGAGAGCAGCTGCCCTGCTCCAGGTCTTAGCCTCAGTTGCCACAATCCTTGCCGTATGACCAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS-3UTR CAA 90 bp CTCAAAGCCTCTCACTCCTCAGGTCTGGGCAGGAGGTCCTTCTGCCAAGCAGCTTTTTCTGTTCAGGGCTaGACAGATAAAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LKASHSSGLGRRSFCQAAFSVQG*TDKVSS
Trigger: GCTGGAAACTTTATCTGTCAAGCCCTGAACAGAAAA...AGCTGCTTGGCAGAAGGACCTCCTGCCCAGACCTGAGGAGTGAGAGGCTTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS TCA 90 bp AGGATACCAATGTGCTCTGACTCACCCCCGCACAGAAATATTGGCTaGCTGCGCTGCCTTCAGGATTGCGTCAAACCTCTGAAAACTCTC +
Preference number: 5 (lower is better)
Translates to: RIPMCSDSPPHRNIG*LRCLQDCVKPLKTL
Trigger: GAGAGTTTTCAGAGGTTTGACGCAATCCTGAAGGCAGCGCAGTCAGCCAATATTTCTGTGCGGGGGTGAGTCAGAGCACATTGGTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479458.1
CDS CCA 90 bp AGCAGCAACCGCTGCCTCGAAGCCTTTCAAATTTGGGGTCAGGACTaGGTAGTTGATGCCAGGAAACTTCTGAATGCCCTTCAAGACTTC +
Preference number: 5 (lower is better)
Translates to: SSNRCLEAFQIWGQD*VVDARKLLNALQDF
Trigger: GAAGTCTTGAAGGGCATTCAGAAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGTTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000479458.1
ENST00000513148.1
CDS CCA 90 bp CTTGGTGACCGCTGCCTCGAAGCCTTTCAAATTTGGGGTCAGGACTaGGTAGTTGATGCCAGGAAACTTCTGAATGCCCTTCAAGACTTC +
Preference number: 5 (lower is better)
Translates to: LGDRCLEAFQIWGQD*VVDARKLLNALQDF
Trigger: GAAGTCTTGAAGGGCATTCAGAAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGTCACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436439.6
CDS CCA 90 bp CAGAGGACATCAGGGTTGTGGCCTTTCAATCACTACAAGGAACTATaGGAACTCCTGGGTAAGGAGCCCCTCCTCAGAGAATCACCTCAA +
Preference number: 5 (lower is better)
Translates to: QRTSGLWPFNHYKEL*ELLGKEPLLRESPQ
Trigger: TTGAGGTGATTCTCTGAGGAGGGGCTCCTTACCCAGGAGTTCCCATAGTTCCTTGTAGTGATTGAAAGGCCACAACCCTGATGTCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS-3UTR CAA 90 bp GGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCCCCATCCAGGTGTTGGCCAGGGCTaGACCATAGGTGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: GYEVPAPFNLFSFPCPHPGVGQG*TIGVMA
Trigger: TGCCATGACACCTATGGTCAAGCCCTGGCCAACACC...TGGATGGGGACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp GCCCTTCGCCTGCTTTCTGCCAGGAGAGACCTCTGTGTAGAGCTGGCTATGAGGAGCATGTCTATCAGCTaGATTTTCACTGGAGTAGAT +
Preference number: 5 (lower is better)
Translates to: ALRLLSARRDLCVELAMRSMSIS*IFTGVD
Trigger: ATCTACTCCAGTGAAAATCAAGCTGATAGACATGCT...CCTCATAGCCAGCTCTACACAGAGGTCTCTCCTGGCAGAAAGCAGGCGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS GCA 90 bp AATCTCATTTCAGGAGCCCCCACCAACAAGCTATCCTCTTACCGCTaGCTCGAAGCCTTTCAAATTTGGGGTCAGGACTGGGTAGTTGAT +
Preference number: 5 (lower is better)
Translates to: NLISGAPTNKLSSYR*LEAFQIWGQDWVVD
Trigger: ATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGTAAGAGGATAGCTTGTTGGTGGGGGCTCCTGAAATGAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498698.1
CDS GCA 90 bp CTGAGGCTAAGACCTGGAGCAGGGCAGCTGCTCTCAAGAAACAGTTaGTACTGTTACCATTCCACCTATCTGGATGCCACAAAGTATCCT +
Preference number: 5 (lower is better)
Translates to: LRLRPGAGQLLSRNS*YCYHSTYLDATKYP
Trigger: AGGATACTTTGTGGCATCCAGATAGGTGGAATGGTAACAGTAGCAACTGTTTCTTGAGAGCAGCTGCCCTGCTCCAGGTCTTAGCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 90 bp TCCTCTTACCGCTGCCTCGAAGCCTTTCAAATTTGGGGTCAGGACTaGGTAGTTGATGCCAGGAAACTTCTGAATGCCCTTCAAGACTTC +
Preference number: 5 (lower is better)
Translates to: SSYRCLEAFQIWGQD*VVDARKLLNALQDF
Trigger: GAAGTCTTGAAGGGCATTCAGAAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGTAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498698.1
CDS CCA 90 bp ACCAACAAGCTATCCTCTTACCGCTGCCTCGAAGCCTTTCAAATTTaGGGTCAGGACTGGGTAGTTGATGCCAGGAAACTTCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: TNKLSSYRCLEAFQI*GQDWVVDARKLLNA
Trigger: GGCATTCAGAAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGTAAGAGGATAGCTTGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498698.1
CDS-3UTR CAA 90 bp ATTTCCATGTCCCCATCCATGAATCATCTGTGTGTGCCCCTATTTCCACATCATGGTGTTGGCCAGGGCTaGACCATAGGTGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: ISMSPSMNHLCVPLFPHHGVGQG*TIGVMA
Trigger: TGCCATGACACCTATGGTCAAGCCCTGGCCAACACC...ATGATGTGGAAATAGGGGCACACACAGATGATTCATGGATGGGGACATGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp TTTTCCAGAGATGCTGGAGTTGGCAGACGGCCACCACGTAGCTCTCCACTTTCCTTTTCTGTTCAGGGCTaGACAGATAAAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: FSRDAGVGRRPPRSSPLSFSVQG*TDKVSS
Trigger: GCTGGAAACTTTATCTGTCAAGCCCTGAACAGAAAA...GGAAAGTGGAGAGCTACGTGGTGGCCGTCTGCCAACTCCAGCATCTCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS TCA 90 bp TTGGGCTGGTCAAACTCAATTCCCATGCCATGTTCTTCTCAGTGTTaGCCTGGTGACTGTTCAGAGGACATCAGGGTTGTGGCCTTTCAA +
Preference number: 5 (lower is better)
Translates to: LGWSNSIPMPCSSQC*PGDCSEDIRVVAFQ
Trigger: TTGAAAGGCCACAACCCTGATGTCCTCTGAACAGTCACCAGGTCAACACTGAGAAGAACATGGCATGGGAATTGAGTTTGACCAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 90 bp CTTCTCAGTGTTGACCTGGTGACTGTTCAGAGGACATCAGGGTTGTaGCCTTTCAATCACTACAAGGAACTATGGGAACTCCTGGGTAAG +
Preference number: 5 (lower is better)
Translates to: LLSVDLVTVQRTSGL*PFNHYKELWELLGK
Trigger: CTTACCCAGGAGTTCCCATAGTTCCTTGTAGTGATTGAAAGGCCACAACCCTGATGTCCTCTGAACAGTCACCAGGTCAACACTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS-3UTR CAA 90 bp TGTAGAGCTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTATGGCCTCTGCCAGCTaGGGAAGAACCTCCATGACC +
Preference number: 5 (lower is better)
Translates to: CRAGYEVPAPFNLFSFPCMASAS*GRTSMT
Trigger: GGTCATGGAGGTTCTTCCCAAGCTGGCAGAGGCCAT...ACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAGCTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000235958.4
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp TGTAGAGCTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCCCCGCACAGAAATATaGGCTGACTGCGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: CRAGYEVPAPFNLFSFPCPRTEI*ADCAAF
Trigger: GAAGGCAGCGCAGTCAGCCAATATTTCTGTGCGGGG...ACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAGCTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS CCA 90 bp AGCTGCTCTCAAGAAACAGTTGCTACTGTTACCATTCCACCTATCTaGATGCCACAAAGTATCCTGGGAAGAAGTGGGCTTTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SCSQETVATVTIPPI*MPQSILGRSGLWRE
Trigger: CTCTCTCCAAAGCCCACTTCTTCCCAGGATACTTTGTGGCATCCAGATAGGTGGAATGGTAACAGTAGCAACTGTTTCTTGAGAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS GCA 90 bp TGGCTTCCAACATCTGCTAAGAGCTACCTCTACTCAATAAAACCTTaGACCCATTCTCTAAGCCCAGGTGTGATCCAATTCTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: WLPTSAKSYLYSIKP*THSLSPGVIQFFWY
Trigger: GTACCAGAAGAATTGGATCACACCTGGGCTTAGAGAATGGGTGCAAGGTTTTATTGAGTAGAGGTAGCTCTTAGCAGATGTTGGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS GCA 90 bp GGACTAAATGACATAAGTTCTTGGGCTGGTCAAACTCAATTCCCATaGCATGTTCTTCTCAGTGTTGACCTGGTGACTGTTCAGAGGACA +
Preference number: 5 (lower is better)
Translates to: GLNDISSWAGQTQFP*HVLLSVDLVTVQRT
Trigger: TGTCCTCTGAACAGTCACCAGGTCAACACTGAGAAGAACATGGCATGGGAATTGAGTTTGACCAGCCCAAGAACTTATGTCATTTAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS GCA 90 bp GCTCTCAAGAAACAGTTGCTACTGTTACCATTCCACCTATCTGGATaGCACAAAGTATCCTGGGAAGAAGTGGGCTTTGGAGAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ALKKQLLLLPFHLSG*HKVSWEEVGFGERK
Trigger: TTTTCTCTCTCCAAAGCCCACTTCTTCCCAGGATACTTTGTGGCATCCAGATAGGTGGAATGGTAACAGTAGCAACTGTTTCTTGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS-3UTR CAA 90 bp TGTAGAGCTGGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCGAAGCCTTTCAAATTaGGGGTCAGGACTGGGTAGT +
Preference number: 5 (lower is better)
Translates to: CRAGYEVPAPFNLFSFPCRSLSN*GSGLGS
Trigger: ACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCG...ACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCCAGCTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374490.8
ENST00000436439.6
CDS-3UTR CAA 90 bp GGCTATGAGGTACCTGCACCATTTAACCTATTCTCATTTCCATGTCCCCATCCACAATTGATGTTCTTCTaGGTGAAGAGCTCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: GYEVPAPFNLFSFPCPHPQLMFF*VKSSEA
Trigger: TGCCTCAGAGCTCTTCACCAAGAAGAACATCAATTG...TGGATGGGGACATGGAAATGAGAATAGGTTAAATGGTGCAGGTACCTCATAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374490.8
CDS TCA 90 bp GAAATATTGGCTGACTGCGCTGCCTTCAGGATTGCGTCAAACCTCTaGAAACTCTCCTCTATGGAACAATTGATGTTCTTCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: EILADCAAFRIASNL*KLSSMEQLMFFLVK
Trigger: CTTCACCAAGAAGAACATCAATTGTTCCATAGAGGAGAGTTTTCAGAGGTTTGACGCAATCCTGAAGGCAGCGCAGTCAGCCAATATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000479458.1
ENST00000496907.1
ENST00000513148.1
CDS GCA 90 bp CCACTTAGGAGACACAAAGCTGGTGGTTTCTATAACAGAGAGTCCTaGTTCAGAAAGCATGTCTATCAGCTTGATTTTCACTGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: PLRRHKAGGFYNRES*FRKHVYQLDFHWSR
Trigger: TCTACTCCAGTGAAAATCAAGCTGATAGACATGCTTTCTGAAGCAGGACTCTCTGTTATAGAAACCACCAGCTTTGTGTCTCCTAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000436439.6
ENST00000509389.5
ENST00000513148.1
CDS TCA 90 bp GGCCCTCTACGTACGTTTTCTTACTTAATCCTCACAATGGCTCCATaGGATGGATGGCATTATTATTCCCATTTCTTAGGTTCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GPLRTFSYLILTMAP*DGWHYYSHFLGSER
Trigger: TCTCTCTGAACCTAAGAAATGGGAATAATAATGCCATCCATCTCATGGAGCCATTGTGAGGATTAAGTAAGAAAACGTACGTAGAGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS TCA 90 bp ACAGTGCCTAGCACACTAGGCACCGTTAGGTTAGGTTTTAATAGGTaGATAAATGGTCTTACAATGTGCTATTTACACGCCTGTAATCTT +
Preference number: 5 (lower is better)
Translates to: TVPSTLGTVRLGFNR*INGLTMCYLHACNL
Trigger: AAGATTACAGGCGTGTAAATAGCACATTGTAAGACCATTTATTCACCTATTAAAACCTAACCTAACGGTGCCTAGTGTGCTAGGCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496907.1
CDS CAA 72 bp GCCAGCAGGCCGCTGACCAGCAGAACGACGCAGAGTTaGGCTGGGACTGTGGAAGGGGGTCCCGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ASRPLTSRTTQS*AGTVEGGPGLL
Trigger: CAGCAGCCCGGGACCCCCTTCCACAGTCCCAGCCAAACTCTGCGTCGTTCTGCTGGTCAGCGGCCTGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS CCA 72 bp CAGGCCGCTGACCAGCAGAACGACGCAGAGTTTGGCTaGGACTGTGGAAGGGGGTCCCGGGCTGCTGAGTGG +
Preference number: 6 (lower is better)
Translates to: QAADQQNDAEFG*DCGRGSRAAEW
Trigger: CCACTCAGCAGCCCGGGACCCCCTTCCACAGTCCCAGCCAAACTCTGCGTCGTTCTGCTGGTCAGCGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS TCA 72 bp AGCACATCAGCAGGCACTGGCACGCCAGCAGGCCGCTaGCCAGCAGAACGACGCAGAGTTTGGCTGGGACTG +
Preference number: 6 (lower is better)
Translates to: STSAGTGTPAGR*PAERRRVWLGL
Trigger: CAGTCCCAGCCAAACTCTGCGTCGTTCTGCTGGTCAGCGGCCTGCTGGCGTGCCAGTGCCTGCTGATGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS GCA 72 bp ATGGCCTCACCCAAGGAGCTGCTGCCCACACGGGGCTaGTGGACAAGGTGCAGAGGGATGTGGCAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: MASPKELLPTRG*WTRCRGMWQGK
Trigger: CTTTCCCTGCCACATCCCTCTGCACCTTGTCCAGCAGCCCCGTGTGGGCAGCAGCTCCTTGGGTGAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 72 bp TGCTTCCGTCCCGCCACTGAGGGCCCTGGTGGACTCTaGCGGATCCCTGGTGAGCTGTCTAACGCTACTGTC +
Preference number: 6 (lower is better)
Translates to: CFRPATEGPGGL*RIPGELSNATV
Trigger: GACAGTAGCGTTAGACAGCTCACCAGGGATCCGCCAGAGTCCACCAGGGCCCTCAGTGGCGGGACGGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS CAA 72 bp AGCTGTAAGCATCCACCCCTACATGCTGCCGTGGGGTaGGAGGCCCACAGCCTCTGCCTGTCTGTATGCCCC +
Preference number: 6 (lower is better)
Translates to: SCKHPPLHAAVG*EAHSLCLSVCP
Trigger: GGGGCATACAGACAGGCAGAGGCTGTGGGCCTCCAACCCCACGGCAGCATGTAGGGGTGGATGCTTACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS GCA 72 bp GTCGCCACCAGGGGGTGGGTGGGCTTACCGTGTGAATaGCCAAGCCCTCTAGCATGTAGACCAGGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: VATRGWVGLPCE*PSPLACRPGLL
Trigger: CAGAAGACCTGGTCTACATGCTAGAGGGCTTGGGCATTCACACGGTAAGCCCACCCACCCCCTGGTGGCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS CCA 72 bp GAGAGGAGCACATCAGTGGAGGAACACACAGGCGGCTaGACGTCCAGAGGAGCACATCAGCAGGCACTGGCA +
Preference number: 6 (lower is better)
Translates to: ERSTSVEEHTGG*TSRGAHQQALA
Trigger: TGCCAGTGCCTGCTGATGTGCTCCTCTGGACGTCCAGCCGCCTGTGTGTTCCTCCACTGATGTGCTCCTCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS CCA 72 bp TGCCCCAGGGTCTGGCTGACAGACAAGCTATTCAGATaGACATCCCAGGACAGGGGACTGAGGCGCCAAGAC +
Preference number: 6 (lower is better)
Translates to: CPRVWLTDKLFR*TSQDRGLRRQD
Trigger: GTCTTGGCGCCTCAGTCCCCTGTCCTGGGATGTCCATCTGAATAGCTTGTCTGTCAGCCAGACCCTGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498698.1
CDS CAA 72 bp AGTAAGCTGCAGGGCCATCAAGGTGTTGGCCAGGGCTaGACCATAGGTGTCATGGCAGTGGACAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: SKLQGHQGVGQG*TIGVMAVDSQG
Trigger: GCCCTGGCTGTCCACTGCCATGACACCTATGGTCAAGCCCTGGCCAACACCTTGATGGCCCTGCAGCTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496907.1
CDS CCA 72 bp TGCCCAAGCCCTCTAGCATGTAGACCAGGTCTTCTGTaGCCAAGTTTCCTGATGCCCCCTGTGCGTAGGGAC +
Preference number: 6 (lower is better)
Translates to: CPSPLACRPGLL*PSFLMPPVRRD
Trigger: GTCCCTACGCACAGGGGGCATCAGGAAACTTGGCCACAGAAGACCTGGTCTACATGCTAGAGGGCTTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000235958.4
ENST00000374487.6
ENST00000374490.8
ENST00000436439.6
ENST00000509389.5
CDS CCA 72 bp GAGCTCAGGCTGCCCCCACCCAGGATAAGAAGTTTGTaGCAGGAGGACCACTTGAGTCAGAGTCTAGCCCCA +
Preference number: 6 (lower is better)
Translates to: ELRLPPPRIRSL*QEDHLSQSLAP
Trigger: TGGGGCTAGACTCTGACTCAAGTGGTCCTCCTGCCACAAACTTCTTATCCTGGGTGGGGGCAGCCTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479458.1
CDS TCA 72 bp AATGGTGTCCCCCAGGGAGATCTCGTAGCAGCCCATTaGGTAGAACTTCTTGGTGACCGCTGCCTCGAAGCC +
Preference number: 6 (lower is better)
Translates to: NGVPQGDLVAAH*VELLGDRCLEA
Trigger: GGCTTCGAGGCAGCGGTCACCAAGAAGTTCTACTCAATGGGCTGCTACGAGATCTCCCTGGGGGACACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436439.6
CDS CAA 90 bp AGGCTGCCCCCACCCAGGATAAGAAGTTTGTGGCAGGAGGACCACTaGAGTCAGAGTCTAGCCCCATTCCAGAACGGTACAGAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: RLPPPRIRSLWQEDH*SQSLAPFQNGTEER
Trigger: CCTTTCCTCTGTACCGTTCTGGAATGGGGCTAGACTCTGACTCAAGTGGTCCTCCTGCCACAAACTTCTTATCCTGGGTGGGGGCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479458.1
CDS TCA 72 bp AGCACAGGAGACGTACCCCCGCACAGAAATATTGGCTaGCTGCGCTGCCTTCAGGATTGCGTCAAACCTCTG +
Preference number: 6 (lower is better)
Translates to: STGDVPPHRNIG*LRCLQDCVKPL
Trigger: CAGAGGTTTGACGCAATCCTGAAGGCAGCGCAGTCAGCCAATATTTCTGTGCGGGGGTACGTCTCCTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000496907.1
ENST00000513148.1
CDS TCA 72 bp CTGGTGTCTCCTAGGACTGAACTGTCAAAGTCACCCTaGCACTCCAGCCTTCTTATGCCCATGCGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: LVSPRTELSKSP*HSSLLMPMRVA
Trigger: GGCCACACGCATGGGCATAAGAAGGCTGGAGTGTCAGGGTGACTTTGACAGTTCAGTCCTAGGAGACACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS CCA 72 bp CAAGAGCACAGGAGACGTACCCCCGCACAGAAATATTaGCTGACTGCGCTGCCTTCAGGATTGCGTCAAACC +
Preference number: 6 (lower is better)
Translates to: QEHRRRTPAQKY*LTALPSGLRQT
Trigger: GGTTTGACGCAATCCTGAAGGCAGCGCAGTCAGCCAATATTTCTGTGCGGGGGTACGTCTCCTGTGCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000496907.1
ENST00000513148.1
CDS CCA 72 bp CGCCCTGACACATGCACACACCTCAGCTACTTTAGCTaGGGAGATCTTCCCTTCATAAGGGCAGCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: RPDTCTHLSYFS*GDLPFIRAAKS
Trigger: GCTCTTGGCTGCCCTTATGAAGGGAAGATCTCCCCAGCTAAAGTAGCTGAGGTGTGTGCATGTGTCAGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CAA 72 bp AAGAGCTCTGAGGCAGCTCCAAAGATGACTACTTCCTaGGCTCCAGCAGCAACCGCTGCCTCGAAGCCTTTC +
Preference number: 6 (lower is better)
Translates to: KSSEAAPKMTTS*APAATAASKPF
Trigger: GAAAGGCTTCGAGGCAGCGGTTGCTGCTGGAGCCAAGGAAGTAGTCATCTTTGGAGCTGCCTCAGAGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000479458.1
ENST00000513148.1
CDS CAA 72 bp CCAAGAGCACAGGAGACGTACCCCCGCACAGAAATATaGGCTGACTGCGCTGCCTTCAGGATTGCGTCAAAC +
Preference number: 6 (lower is better)
Translates to: PRAQETYPRTEI*ADCAAFRIASN
Trigger: GTTTGACGCAATCCTGAAGGCAGCGCAGTCAGCCAATATTTCTGTGCGGGGGTACGTCTCCTGTGCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000496907.1
ENST00000513148.1
CDS TCA 72 bp ATGTGCTCTGACTCACCCCCGCACAGAAATATTGGCTaGCTGCGCTGCCTTCAGGATTGCGTCAAACCTCTG +
Preference number: 6 (lower is better)
Translates to: MCSDSPPHRNIG*LRCLQDCVKPL
Trigger: CAGAGGTTTGACGCAATCCTGAAGGCAGCGCAGTCAGCCAATATTTCTGTGCGGGGGTGAGTCAGAGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479458.1
CDS TCA 72 bp TCAGGTGGGCAAGGGGCTCAGAGTTTACAGGTAGCCTaGGCCACTTTGGAGCTAGTTTTTCTGTTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: SGGQGAQSLQVA*ATLELVFLFRA
Trigger: AGCCCTGAACAGAAAAACTAGCTCCAAAGTGGCTCAGGCTACCTGTAAACTCTGAGCCCCTTGCCCACCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235958.4
ENST00000374487.6
ENST00000374490.8
ENST00000436439.6
CDS TCA 72 bp CCAGAACGGTACAGAGGAAAGGATACCAATGTGCTCTaGCTCACCCCCGCACAGAAATATTGGCTGACTGCG +
Preference number: 6 (lower is better)
Translates to: PERYRGKDTNVL*LTPAQKYWLTA
Trigger: CGCAGTCAGCCAATATTTCTGTGCGGGGGTGAGTCAGAGCACATTGGTATCCTTTCCTCTGTACCGTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479458.1
CDS TCA 72 bp GTAATCTTCCATCTGTCTTCCCCACCCACCATAACATaGGCTCCCAGAGGGCAGGGATTGGGTCTTGTTACC +
Preference number: 6 (lower is better)
Translates to: VIFHLSSPPTIT*APRGQGLGLVT
Trigger: GGTAACAAGACCCAATCCCTGCCCTCTGGGAGCTCATGTTATGGTGGGTGGGGAAGACAGATGGAAGATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496907.1
CDS TCA 72 bp AGGGGACCAGAAGACACCAGTGATCTGCTAAATAAATaGAATGGTGACGTCGCTTCCCCAGTGGCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: RGPEDTSDLLNK*NGDVASPVALQ
Trigger: CTGCAGGGCCACTGGGGAAGCGACGTCACCATTTCATTTATTTAGCAGATCACTGGTGTCTTCTGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS GCA 72 bp GTGCAGGGGAAGGAGCAGGCCTTTGAAGTCACGAGATaGTGGGTTAAAGTCCTAGTTCTGCTGTTCACTAGC +
Preference number: 6 (lower is better)
Translates to: VQGKEQAFEVTR*WVKVLVLLFTS
Trigger: GCTAGTGAACAGCAGAACTAGGACTTTAACCCAGCATCTCGTGACTTCAAAGGCCTGCTCCTTCCCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS GCA 72 bp AACTGTCAAAGTCACCCTGACACTCCAGCCTTCTTATaGCCATGCGTGTGGCCTCACTCAACCCTACTCTCA +
Preference number: 6 (lower is better)
Translates to: NCQSHPDTPAFL*PCVWPHSTLLS
Trigger: TGAGAGTAGGGTTGAGTGAGGCCACACGCATGGGCATAAGAAGGCTGGAGTGTCAGGGTGACTTTGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS CCA 72 bp TCCAGCAGCAACCGCTGCCTCGAAGCCTTTCAAATTTaGGGTCAGGACTGGGTAGTTGATGCCAGGAAACTT +
Preference number: 6 (lower is better)
Translates to: SSSNRCLEAFQI*GQDWVVDARKL
Trigger: AAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGTTGCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000479458.1
ENST00000513148.1
CDS CCA 72 bp CAGAGGCACTTCCGCTGCCTCGAAGCCTTTCAAATTTaGGGTCAGGACTGGGTAGTTGATGCCAGGAAACTT +
Preference number: 6 (lower is better)
Translates to: QRHFRCLEAFQI*GQDWVVDARKL
Trigger: AAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGAAGTGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509389.5
CDS CAA 72 bp TACCAATGTGCTCTGACTCACCCCCGCACAGAAATATaGGCTGACTGCGCTGCCTTCAGGATTGCGTCAAAC +
Preference number: 6 (lower is better)
Translates to: YQCALTHPRTEI*ADCAAFRIASN
Trigger: GTTTGACGCAATCCTGAAGGCAGCGCAGTCAGCCAATATTTCTGTGCGGGGGTGAGTCAGAGCACATTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479458.1
CDS CAA 90 bp CTGCTTCTGAAAAATGGTGATGACCCTTTGGTCATACGGCAAGGATaGTGGCAACTGAGGCTAAGACCTGGAGCAGGGCAGCTGCTCTCA +
Preference number: 6 (lower is better)
Translates to: LLLKNGDDPLVIRQG*WQLRLRPGAGQLLS
Trigger: TGAGAGCAGCTGCCCTGCTCCAGGTCTTAGCCTCAGTTGCCACAATCCTTGCCGTATGACCAAAGGGTCATCACCATTTTTCAGAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS TCA 72 bp AATGGTGTCCCCCAGGGAGATCTCGTAGCAGCCCATTaGGTAGAACTTCTTGGTGACCTCAGCTACTTTAGC +
Preference number: 6 (lower is better)
Translates to: NGVPQGDLVAAH*VELLGDLSYFS
Trigger: GCTAAAGTAGCTGAGGTCACCAAGAAGTTCTACTCAATGGGCTGCTACGAGATCTCCCTGGGGGACACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000496907.1
CDS CCA 72 bp CTTCTTGGTGACCGCTGCCTCGAAGCCTTTCAAATTTaGGGTCAGGACTGGGTAGTTGATGCCAGGAAACTT +
Preference number: 6 (lower is better)
Translates to: LLGDRCLEAFQI*GQDWVVDARKL
Trigger: AAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGTCACCAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436439.6
CDS CCA 72 bp AGAGAATCACCTCAACGACCAGACTGGAAACTGAATTaGAGGTTTTCAGGCTGGATAGAGGCCAGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: RESPQRPDWKLN*RFSGWIEARGF
Trigger: GAAGCCCCTGGCCTCTATCCAGCCTGAAAACCTCCAATTCAGTTTCCAGTCTGGTCGTTGAGGTGATTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 72 bp GAGCCCCTCCTCAGAGAATCACCTCAACGACCAGACTaGAAACTGAATTGGAGGTTTTCAGGCTGGATAGAG +
Preference number: 6 (lower is better)
Translates to: EPLLRESPQRPD*KLNWRFSGWIE
Trigger: CTCTATCCAGCCTGAAAACCTCCAATTCAGTTTCCAGTCTGGTCGTTGAGGTGATTCTCTGAGGAGGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 72 bp GGCCTTTCAATCACTACAAGGAACTATGGGAACTCCTaGGTAAGGAGCCCCTCCTCAGAGAATCACCTCAAC +
Preference number: 6 (lower is better)
Translates to: GLSITTRNYGNS*VRSPSSENHLN
Trigger: GTTGAGGTGATTCTCTGAGGAGGGGCTCCTTACCCAGGAGTTCCCATAGTTCCTTGTAGTGATTGAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 72 bp TCAGGGTTGTGGCCTTTCAATCACTACAAGGAACTATaGGAACTCCTGGGTAAGGAGCCCCTCCTCAGAGAA +
Preference number: 6 (lower is better)
Translates to: SGLWPFNHYKEL*ELLGKEPLLRE
Trigger: TTCTCTGAGGAGGGGCTCCTTACCCAGGAGTTCCCATAGTTCCTTGTAGTGATTGAAAGGCCACAACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CAA 72 bp AAAAATGGTGATGACCCTTTGGTCATACGGCAAGGATaGTGGCAACTGAGGCTAAGACCTGGAGCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: KNGDDPLVIRQG*WQLRLRPGAGQ
Trigger: CTGCCCTGCTCCAGGTCTTAGCCTCAGTTGCCACAATCCTTGCCGTATGACCAAAGGGTCATCACCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 72 bp CTATCCTCTTACCGCTGCCTCGAAGCCTTTCAAATTTaGGGTCAGGACTGGGTAGTTGATGCCAGGAAACTT +
Preference number: 6 (lower is better)
Translates to: LSSYRCLEAFQI*GQDWVVDARKL
Trigger: AAGTTTCCTGGCATCAACTACCCAGTCCTGACCCCAAATTTGAAAGGCTTCGAGGCAGCGGTAAGAGGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498698.1
CDS CAA 90 bp GTTCTTCTCAGTGTTGACCTGGTGACTGTTCAGAGGACATCAGGGTaGTGGCCTTTCAATCACTACAAGGAACTATGGGAACTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: VLLSVDLVTVQRTSG*WPFNHYKELWELLG
Trigger: ACCCAGGAGTTCCCATAGTTCCTTGTAGTGATTGAAAGGCCACAACCCTGATGTCCTCTGAACAGTCACCAGGTCAACACTGAGAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 72 bp ACCCATTCTCTAAGCCCAGGTGTGATCCAATTCTTCTaGTACACCAAGGCAAGAACCCGGCATATAGAAAGC +
Preference number: 6 (lower is better)
Translates to: THSLSPGVIQFF*YTKARTRHIES
Trigger: GCTTTCTATATGCCGGGTTCTTGCCTTGGTGTACCAGAAGAATTGGATCACACCTGGGCTTAGAGAATGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS CCA 72 bp GTTGACCTGGTGACTGTTCAGAGGACATCAGGGTTGTaGCCTTTCAATCACTACAAGGAACTATGGGAACTC +
Preference number: 6 (lower is better)
Translates to: VDLVTVQRTSGL*PFNHYKELWEL
Trigger: GAGTTCCCATAGTTCCTTGTAGTGATTGAAAGGCCACAACCCTGATGTCCTCTGAACAGTCACCAGGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CAA 72 bp GCACAGAAATATTGGCTGACTGCGCTGCCTTCAGGATaGCGTCAAACCTCTGAAAACTCTCCTCTATGGAAC +
Preference number: 6 (lower is better)
Translates to: AQKYWLTALPSG*RQTSENSPLWN
Trigger: GTTCCATAGAGGAGAGTTTTCAGAGGTTTGACGCAATCCTGAAGGCAGCGCAGTCAGCCAATATTTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000479458.1
ENST00000496907.1
ENST00000513148.1
CDS CAA 90 bp ACAGGTAGCCTGAGCCACTTTGGAGCTAGTTTTTCTGTTCAGGGCTaGACAGATAAAGTTTCCAGCTTCCAGAAGCTTCTGGAGATTCAC +
Preference number: 6 (lower is better)
Translates to: TGSLSHFGASFSVQG*TDKVSSFQKLLEIH
Trigger: GTGAATCTCCAGAAGCTTCTGGAAGCTGGAAACTTTATCTGTCAAGCCCTGAACAGAAAAACTAGCTCCAAAGTGGCTCAGGCTACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000235958.4
ENST00000374487.6
ENST00000374490.8
ENST00000436439.6
CDS CAA 90 bp AACTTCAGGTACTATCATTTAGCCCTATTTTATAGGCTTGTCAACTaGTCAAGATCACAGAGCAGTGAGTGGCAGGGCCAGGTTTGCCCC +
Preference number: 6 (lower is better)
Translates to: NFRYYHLALFYRLVN*SRSQSSEWQGQVCP
Trigger: GGGGCAAACCTGGCCCTGCCACTCACTGCTCTGTGATCTTGACAAGTTGACAAGCCTATAAAATAGGGCTAAATGATAGTACCTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498698.1
CDS TCA 72 bp GCTGACTGCGCTGCCTTCAGGATTGCGTCAAACCTCTaGAAACTCTCCTCTATGGAACAATTGATGTTCTTC +
Preference number: 6 (lower is better)
Translates to: ADCAAFRIASNL*KLSSMEQLMFF
Trigger: GAAGAACATCAATTGTTCCATAGAGGAGAGTTTTCAGAGGTTTGACGCAATCCTGAAGGCAGCGCAGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374487.6
ENST00000374490.8
ENST00000479458.1
ENST00000496907.1
ENST00000513148.1
CDS CAA 72 bp AGTGTTGACCTGGTGACTGTTCAGAGGACATCAGGGTaGTGGCCTTTCAATCACTACAAGGAACTATGGGAA +
Preference number: 6 (lower is better)
Translates to: SVDLVTVQRTSG*WPFNHYKELWE
Trigger: TTCCCATAGTTCCTTGTAGTGATTGAAAGGCCACAACCCTGATGTCCTCTGAACAGTCACCAGGTCAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS GCA 72 bp GACATAAGTTCTTGGGCTGGTCAAACTCAATTCCCATaGCATGTTCTTCTCAGTGTTGACCTGGTGACTGTT +
Preference number: 6 (lower is better)
Translates to: DISSWAGQTQFP*HVLLSVDLVTV
Trigger: AACAGTCACCAGGTCAACACTGAGAAGAACATGGCATGGGAATTGAGTTTGACCAGCCCAAGAACTTATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS GCA 72 bp AAACAGTTGCTACTGTTACCATTCCACCTATCTGGATaGCACAAAGTATCCTGGGAAGAAGTGGGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: KQLLLLPFHLSG*HKVSWEEVGFG
Trigger: TCCAAAGCCCACTTCTTCCCAGGATACTTTGTGGCATCCAGATAGGTGGAATGGTAACAGTAGCAACTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 72 bp CAAGAAACAGTTGCTACTGTTACCATTCCACCTATCTaGATGCCACAAAGTATCCTGGGAAGAAGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: QETVATVTIPPI*MPQSILGRSGL
Trigger: AAGCCCACTTCTTCCCAGGATACTTTGTGGCATCCAGATAGGTGGAATGGTAACAGTAGCAACTGTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CCA 72 bp ATGGGTCCAATTGGAATAAGCCATACTGGAATAGGGTaGGCCCCTAATCCCATACGACTGGTGAACTTAAAA +
Preference number: 6 (lower is better)
Translates to: MGPIGISHTGIG*APNPIRLVNLK
Trigger: TTTTAAGTTCACCAGTCGTATGGGATTAGGGGCCCACCCTATTCCAGTATGGCTTATTCCAATTGGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS CAA 90 bp TTTTCTGAGCTTCAATTTCTGCTTCTGAAAAATGGTGATGACCCTTaGGTCATACGGCAAGGATTGTGGCAACTGAGGCTAAGACCTGGA +
Preference number: 6 (lower is better)
Translates to: FSELQFLLLKNGDDP*VIRQGLWQLRLRPG
Trigger: TCCAGGTCTTAGCCTCAGTTGCCACAATCCTTGCCGTATGACCAAAGGGTCATCACCATTTTTCAGAAGCAGAAATTGAAGCTCAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513148.1
CDS GCA 72 bp ACATCTGCTAAGAGCTACCTCTACTCAATAAAACCTTaGACCCATTCTCTAAGCCCAGGTGTGATCCAATTC +
Preference number: 6 (lower is better)
Translates to: TSAKSYLYSIKP*THSLSPGVIQF
Trigger: GAATTGGATCACACCTGGGCTTAGAGAATGGGTGCAAGGTTTTATTGAGTAGAGGTAGCTCTTAGCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374487.6
CDS TCA 72 bp AGCACACTAGGCACCGTTAGGTTAGGTTTTAATAGGTaGATAAATGGTCTTACAATGTGCTATTTACACGCC +
Preference number: 6 (lower is better)
Translates to: STLGTVRLGFNR*INGLTMCYLHA
Trigger: GGCGTGTAAATAGCACATTGTAAGACCATTTATTCACCTATTAAAACCTAACCTAACGGTGCCTAGTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496907.1
CDS TCA 72 bp CGTACGTTTTCTTACTTAATCCTCACAATGGCTCCATaGGATGGATGGCATTATTATTCCCATTTCTTAGGT +
Preference number: 6 (lower is better)
Translates to: RTFSYLILTMAP*DGWHYYSHFLG
Trigger: ACCTAAGAAATGGGAATAATAATGCCATCCATCTCATGGAGCCATTGTGAGGATTAAGTAAGAAAACGTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509389.5