Pregenerated sensors for HMGB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000189403Ensembl transcript IDs: ENST00000339872.8, ENST00000341423.10, ENST00000399489.5, ENST00000405805.5, ENST00000468384.1, ENST00000490788.1
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTCCACTGACTTTCTATTTCTGGATTCCAGAGTCTGCATACCCTTaGCCACCACTGCTCATGCTCACTTACAGGTTTAGTCATACTATT | + |
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Preference number: 1 (lower is better) Translates to: FPLTFYFWIPESAYP*PPLLMLTYRFSHTI Trigger: AATAGTATGACTAAACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCCAGAAATAGAAAGTCAGTGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR CCA 90 bp | GAAACAAGCAATTCTATAACAGAGCACTATTTTGCCTCATTACTCTaGGAGCAATGTGGCATAGACCCATGGAATTTCCCAAGTTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: ETSNSITEHYFASLL*EQCGIDPWNFPSCG Trigger: GCCACAACTTGGGAAATTCCATGGGTCTATGCCACATTGCTCCCAGAGTAATGAGGCAAAATAGTGCTCTGTTATAGAATTGCTTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR GCA 90 bp | ATTTCTGGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATaGTCACTTACAGGTTTAGTCATACTATTGCAGATTTTATTCCTA | + |
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Preference number: 1 (lower is better) Translates to: ISGFQSLHTLAHHCS*SLTGLVILLQILFL Trigger: TAGGAATAAAATCTGCAATAGTATGACTAAACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCCAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR GCA 90 bp | CTTTCTATTTCTGGATTCCAGAGTCTGCATACCCTTGCCCACCACTaGTCATGCTCACTTACAGGTTTAGTCATACTATTGCAGATTTTA | + |
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Preference number: 1 (lower is better) Translates to: LSISGFQSLHTLAHH*SCSLTGLVILLQIL Trigger: TAAAATCTGCAATAGTATGACTAAACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCCAGAAATAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR CCA 90 bp | TTCTATAACAGAGCACTATTTTGCCTCATTACTCTGGGAGCAATGTaGCATAGACCCATGGAATTTCCCAAGTTGTGGCAAGTGTTATTA | + |
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Preference number: 1 (lower is better) Translates to: FYNRALFCLITLGAM*HRPMEFPKLWQVLL Trigger: TAATAACACTTGCCACAACTTGGGAAATTCCATGGGTCTATGCCACATTGCTCCCAGAGTAATGAGGCAAAATAGTGCTCTGTTATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR TCA 90 bp | ACAAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTaGGTTTTAGACATCCAACTTCTAGGGGATACTGTTAGAACACCA | + |
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Preference number: 1 (lower is better) Translates to: TRLYTYLNCLPLPFT*VLDIQLLGDTVRTP Trigger: TGGTGTTCTAACAGTATCCCCTAGAAGTTGGATGTCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
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| 3UTR-3UTR GCA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTGAAGGTCCAAACCAATaGACATGTCTAAAGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGEGPNQ*TCLKSS Trigger: AGATGACTTTAGACATGTGCATTGGTTTGGACCTTC...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CCA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTACCACCATCTTTTGCTaGATAGACAATCAAATCACT | + |
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Preference number: 2 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGTTIFC*IDNQIT Trigger: AGTGATTTGATTGTCTATCCAGCAAAAGATGGTGGT...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CCA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTCTTCCTTCTTTTCAGTaGATGCCCAATAAATTCAAC | + |
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Preference number: 2 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGLPSFQ*MPNKFN Trigger: GTTGAATTTATTGGGCATCCACTGAAAAGAAGGAAG...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATACTCTGGGAGCAATGTaGCATAGACCCATGGAATTT | + |
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Preference number: 2 (lower is better) Translates to: LSSSTFEVSEDPHMPERNTLGAM*HRPMEF Trigger: AAATTCCATGGGTCTATGCCACATTGCTCCCAGAGT...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATTACCTTACCATCACATaGAAGTGTCTTACTGCTACT | + |
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Preference number: 2 (lower is better) Translates to: LSSSTFEVSEDPHMPERNYLTIT*KCLTAT Trigger: AGTAGCAGTAAGACACTTGCATGTGATGGTAAGGTA...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATGAAATACCTGTTGAATaGCAGTTTGTGTTACATGGG | + |
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Preference number: 2 (lower is better) Translates to: LSSSTFEVSEDPHMPERNEIPVE*QFVLHG Trigger: CCCATGTAACACAAACTGCCATTCAACAGGTATTTC...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATGAATTTCCCAAGTTGTaGCAAGTGTTATTAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: LSSSTFEVSEDPHMPERNEFPKL*QVLLAL Trigger: CAGTGCTAATAACACTTGCCACAACTTGGGAAATTC...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR TCA 90 bp | TGCAGATACCTTACCATCACATGCAAGTGTCTTACTGCTACTGAAAGCTATCAGAAGGGAAATACCTGTTaGATGGCAGTTTGTGTTACA | + |
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Preference number: 2 (lower is better) Translates to: CRYLTITCKCLTATESYQKGNTC*MAVCVT Trigger: TGTAACACAAACTGCCATTCAACAGGTATTTCCCTT...CTGATAGCTTTCAGTAGCAGTAAGACACTTGCATGTGATGGTAAGGTATCTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR GCA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCGATGTTCGACACAATTaGAGCCTATCACTAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: ILLEHQTILIFRLKRGFVDVRHN*SLSLTL Trigger: CAGGGTTAGTGATAGGCTGCAATTGTGTCGAACATC...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
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| 3UTR-3UTR TCA 90 bp | CGTGAAACAAGCAATTCTATAACAGAGCACTATTTTGCCTCATTACTCTGGGAGCCACTTCCATTTACTTaGGTTTTAGACATCCAACTT | + |
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Preference number: 2 (lower is better) Translates to: RETSNSITEHYFASLLWEPLPFT*VLDIQL Trigger: AAGTTGGATGTCTAAAACTCAAGTAAATGGAAGTGG...CTCCCAGAGTAATGAGGCAAAATAGTGCTCTGTTATAGAATTGCTTGTTTCACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR GCA 90 bp | TTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCCATTTTGATGTTCGACACAATTaGAGCCTATCACTAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: LEHQTILIFRLKRGFVHFDVRHN*SLSLTL Trigger: CAGGGTTAGTGATAGGCTGCAATTGTGTCGAACATC...AAAATGGACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
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| 3UTR-3UTR CAA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTCTGTTGAATGGCAGTTaGTGTTACATGGGCGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGLLNGS*CYMGAF Trigger: AAAAGCGCCCATGTAACACAAACTGCCATTCAACAG...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CAA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTCCCACTTCCATTTACTaGAGTTTTAGACATCCAACT | + |
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Preference number: 3 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGPTSIY*SFRHPT Trigger: AGTTGGATGTCTAAAACTCAAGTAAATGGAAGTGGG...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CAA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTTTACACTTATCTAAATaGCCTCCCACTTCCATTTAC | + |
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Preference number: 3 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGLHLSK*PPTSIY Trigger: GTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAA...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATACTGAGGCGGGAGGATaGTTTGAGCAGATTTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LSSSTFEVSEDPHMPERNTEAGG*FEQIWR Trigger: TCTCCAAATCTGCTCAAACAATCCTCCCGCCTCAGT...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR GCA 72 bp | TCTGGATTCCAGAGTCTGCATACCCTTGCCCACCACTaGTCATGCTCACTTACAGGTTTAGTCATACTATTG | + |
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Preference number: 3 (lower is better) Translates to: SGFQSLHTLAHH*SCSLTGLVILL Trigger: CAATAGTATGACTAAACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR GCA 72 bp | CTTTCCACTGACTTTCTATTTCTGGATTCCAGAGTCTaGATACCCTTGCCCACCACTGCTCATGCTCACTTA | + |
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Preference number: 3 (lower is better) Translates to: LSTDFLFLDSRV*IPLPTTAHAHL Trigger: TAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCCAGAAATAGAAAGTCAGTGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR GCA 72 bp | TTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATaGTCACTTACAGGTTTAGTCATACTATTGCAGATT | + |
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Preference number: 3 (lower is better) Translates to: FQSLHTLAHHCS*SLTGLVILLQI Trigger: AATCTGCAATAGTATGACTAAACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR GCA 72 bp | ACTTTCTATTTCTGGATTCCAGAGTCTGCATACCCTTaGCCACCACTGCTCATGCTCACTTACAGGTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: TFYFWIPESAYP*PPLLMLTYRFS Trigger: ACTAAACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCCAGAAATAGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR GCA 72 bp | GCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATaGCTGAGAGAAATGTACAGATGTTCAGCGCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: AVLLLRYLKTHT*LREMYRCSAQY Trigger: GTACTGCGCTGAACATCTGTACATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR CCA 72 bp | AGAGCACTATTTTGCCTCATTACTCTGGGAGCAATGTaGCATAGACCCATGGAATTTCCCAAGTTGTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: RALFCLITLGAM*HRPMEFPKLWQ Trigger: TTGCCACAACTTGGGAAATTCCATGGGTCTATGCCACATTGCTCCCAGAGTAATGAGGCAAAATAGTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR GCA 72 bp | CGGTGTGTGCAAATTTGCAGATACCTTACCATCACATaGAAGTGTCTTACTGCTACTGAAAGCTATCAGACC | + |
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Preference number: 3 (lower is better) Translates to: RCVQICRYLTIT*KCLTATESYQT Trigger: GGTCTGATAGCTTTCAGTAGCAGTAAGACACTTGCATGTGATGGTAAGGTATCTGCAAATTTGCACACACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATGTTATTAGCACTGCCTaGGTATTAAGAGGACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LSSSTFEVSEDPHMPERNVISTA*VLRGQE Trigger: TTCTTGTCCTCTTAATACCAAGGCAGTGCTAATAAC...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR CCA 72 bp | AATTCTATAACAGAGCACTATTTTGCCTCATTACTCTaGGAGCAATGTGGCATAGACCCATGGAATTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: NSITEHYFASLL*EQCGIDPWNFP Trigger: TGGGAAATTCCATGGGTCTATGCCACATTGCTCCCAGAGTAATGAGGCAAAATAGTGCTCTGTTATAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CAA 90 bp | CGTGAAACAAGCAATTCTATAACAGAGCACTATTTTGCCTCATTACTCTGGGAGAATAGCTCTCAACCTTaGCACAGCAAAGTTAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RETSNSITEHYFASLLWENSSQP*HSKVRK Trigger: TTTCCTAACTTTGCTGTGCAAAGGTTGAGAGCTATT...CTCCCAGAGTAATGAGGCAAAATAGTGCTCTGTTATAGAATTGCTTGTTTCACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CAA 90 bp | CGTGAAACAAGCAATTCTATAACAGAGCACTATTTTGCCTCATTACTCTGGGAGATACTAATCTTCAGATaGAAGAGGGGTTTTGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: RETSNSITEHYFASLLWEILIFR*KRGFVH Trigger: ATGGACAAAACCCCTCTTCAATCTGAAGATTAGTAT...CTCCCAGAGTAATGAGGCAAAATAGTGCTCTGTTATAGAATTGCTTGTTTCACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR TCA 72 bp | TACACTTATCTAAATTGCCTCCCACTTCCATTTACTTaGGTTTTAGACATCCAACTTCTAGGGGATACTGTT | + |
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Preference number: 3 (lower is better) Translates to: YTYLNCLPLPFT*VLDIQLLGDTV Trigger: AACAGTATCCCCTAGAAGTTGGATGTCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
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| 3UTR-3UTR CAA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCTATAGCACCGAATACTaGCAATGTTTGACAAAACCT | + |
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Preference number: 3 (lower is better) Translates to: ILLEHQTILIFRLKRGFVYSTEY*QCLTKP Trigger: AGGTTTTGTCAAACATTGCAAGTATTCGGTGCTATA...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
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| 3UTR-3UTR CAA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCATATAGCACCGAATACTaGCAATGTTTGACAAAACCT | + |
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Preference number: 3 (lower is better) Translates to: LSLSFNHYPSGTQDTQISYSTEY*QCLTKP Trigger: AGGTTTTGTCAAACATTGCAAGTATTCGGTGCTATA...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| 3UTR-3UTR CAA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAATACTAATCTTCAGATaGAAGAGGGGTTTTGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: KALHLSKLPPTSIYLSFRILIFR*KRGFVH Trigger: ATGGACAAAACCCCTCTTCAATCTGAAGATTAGTAT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
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| CDS-3UTR CCA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTTGTGGCATAGACCCATaGAATTTCCCAAGTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGCGIDP*NFPSCG Trigger: GCCACAACTTGGGAAATTCCATGGGTCTATGCCACA...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | TTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCCATTTTGGCGGAGAGGGTCCATaGCACCCCCGCCGGCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LEHQTILIFRLKRGFVHFGGEGP*HPRRLR Trigger: CCGAAGCCGGCGGGGGTGCCATGGACCCTCTCCGCC...AAAATGGACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| 3UTR CAA 72 bp | TCCCAGCTACTTGAGAAACTGAGGCGGGAGGATTGTTaGAGCAGATTTGGAGACCAACCTGGGCAACATAGA | + |
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Preference number: 4 (lower is better) Translates to: SQLLEKLRREDC*SRFGDQPGQHR Trigger: TCTATGTTGCCCAGGTTGGTCTCCAAATCTGCTCAAACAATCCTCCCGCCTCAGTTTCTCAAGTAGCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR TCA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTACATTAACAACACTGTaGTGGGACGATCATCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGTLTTL*WDDHQN Trigger: GTTCTGATGATCGTCCCATCACAGTGTTGTTAATGT...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR GCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAAGAGCGGACTACGGATaGCCGGCGCGGCCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRRADYG*PARPSC Trigger: ACAGCTGGGCCGCGCCGGGCATCCGTAGTCCGCTCT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR GCA 90 bp | TGCAGATACCTTACCATCACATGCAAGTGTCTTACTGCTACTGAAAGCTATCAGGAGTCTGCATACCCTTaGCCACCACTGCTCATGCTC | + |
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Preference number: 4 (lower is better) Translates to: CRYLTITCKCLTATESYQESAYP*PPLLML Trigger: GAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTC...CTGATAGCTTTCAGTAGCAGTAAGACACTTGCATGTGATGGTAAGGTATCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR GCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATCTGGATTCCAGAGTCTaGATACCCTTGCCCACCACT | + |
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Preference number: 4 (lower is better) Translates to: LSSSTFEVSEDPHMPERNLDSRV*IPLPTT Trigger: AGTGGTGGGCAAGGGTATGCAGACTCTGGAATCCAG...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTGAAATACCTGTTGAATaGCAGTTTGTGTTACATGGG | + |
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Preference number: 4 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGEIPVE*QFVLHG Trigger: CCCATGTAACACAAACTGCCATTCAACAGGTATTTC...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCGCTCCACCGAGGCTTTaGGAGAGCGGACTACGGATG | + |
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Preference number: 4 (lower is better) Translates to: ILLEHQTILIFRLKRGFVAPPRL*ESGLRM Trigger: CATCCGTAGTCCGCTCTCCCAAAGCCTCGGTGGAGC...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGACTGCTCCCCTTACCGTaGGAAGATCTGGGAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRLLPLP*EDLGGR Trigger: CCTCCCTCCCAGATCTTCTCACGGTAAGGGGAGCAG...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR GCA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCTCCCTGCGCTTTCGCTaGTCCCCTTACCGTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLEHQTILIFRLKRGFVSLRFR*SPYREK Trigger: CTTCTCACGGTAAGGGGAGCAGCGAAAGCGCAGGGA...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR CCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGACCCTGGCCTCGAAGATaGGCTCTAGGGAGACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRPWPRR*ALGRQG Trigger: TCCCTGTCTCCCTAGAGCCCATCTTCGAGGCCAGGG...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR TCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATTCATCAAGGACTATGTaGTGTCAAGCAAGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSTFEVSEDPHMPERNSSRTM*CQARQY Trigger: GTACTGCCTTGCTTGACATCACATAGTCCTTGATGA...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR TCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATGTGTCTTACTGCTACTaGAAGCTATCAGACCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSTFEVSEDPHMPERNVSYCY*KLSDPF Trigger: GAAAGGGTCTGATAGCTTTCAGTAGCAGTAAGACAC...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR GCA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCGGAATGCAAAGTCCCTaGGCTTTCGCTGCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILLEHQTILIFRLKRGFVGMQSP*AFAAPL Trigger: AAGGGGAGCAGCGAAAGCGCAGGGACTTTGCATTCC...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR GCA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCGAACGGGTCGTGGAATaGAAAGTCCCTGCGCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ILLEHQTILIFRLKRGFVERVVE*KVPALS Trigger: CGAAAGCGCAGGGACTTTGCATTCCACGACCCGTTC...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAGGACAGATCGGCTGTTaGCTAGTCAGAACGGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRGQIGC*LVRTGR Trigger: ACGACCCGTTCTGACTAGTCAACAGCCGATCTGTCC...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR GCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATCGGTGTGTGCAAATTTaGAGATACCTTACCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSTFEVSEDPHMPERNRCVQI*RYLTIT Trigger: TGTGATGGTAAGGTATCTGCAAATTTGCACACACCG...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR GCA 90 bp | TGCAGATACCTTACCATCACATGCAAGTGTCTTACTGCTACTGAAAGCTATCAGCTGAAGACCCACACATaGCTGAGAGAAATGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRYLTITCKCLTATESYQLKTHT*LREMYR Trigger: TCTGTACATTTCTCTCAGGCATGTGTGGGTCTTCAG...CTGATAGCTTTCAGTAGCAGTAAGACACTTGCATGTGATGGTAAGGTATCTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | TTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCCATTTTAGTCAGAACGGGTCGTaGAATGCAAAGTCCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LEHQTILIFRLKRGFVHFSQNGS*NAKSLR Trigger: GCGCAGGGACTTTGCATTCCACGACCCGTTCTGACT...AAAATGGACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS-3UTR TCA 90 bp | TGCAGATACCTTACCATCACATGCAAGTGTCTTACTGCTACTGAAAGCTATCAGAAGAGGACAAGAAAATaGACCACCATCTTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CRYLTITCKCLTATESYQKRTRK*TTIFCW Trigger: CCAGCAAAAGATGGTGGTTCATTTTCTTGTCCTCTT...CTGATAGCTTTCAGTAGCAGTAAGACACTTGCATGTGATGGTAAGGTATCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR TCA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCAGGCGGGAGGATTGTTTaGGCAGATTTGGAGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSFNHYPSGTQDTQISGGRIV*ADLETN Trigger: GTTGGTCTCCAAATCTGCTCAAACAATCCTCCCGCC...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR GCA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCAACCCTTGCCCACCACTaGTCATGCTCACTTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSFNHYPSGTQDTQISTLAHH*SCSLTG Trigger: ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGT...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR GCA 90 bp | GCAGCAATATCCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAAATAGGTCAGAAAACATGCTaGCAATTCGTGGCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAISKISRICRSTATPEIGQKTC*QFVALH Trigger: GTGCAAAGCCACGAATTGGCAGCATGTTTTCTGACC...TATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGATATTGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399489.5 |
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| CDS-3UTR TCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATTATGGTTATCTGTCATaGTGTATCGTGAAACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSTFEVSEDPHMPERNYGYLS*CIVKQA Trigger: TGCTTGTTTCACGATACATCATGACAGATAACCATA...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGATGTGATGACCCTTTGTaGACATGCACTCTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRCDDPL*TCTLWQ Trigger: CTGCCACAGAGTGCATGTTCACAAAGGGTCATCACA...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR TCA 90 bp | GCAGCAATATCCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAAATACGAGTCTGCTCTGAATaGGTATCTAACTGGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: AAISKISRICRSTATPEIRVCSE*VSNWSL Trigger: AAGTGACCAGTTAGATACTCATTCAGAGCAGACTCG...TATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGATATTGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399489.5 |
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| CDS-3UTR GCA 90 bp | CGTGAAACAAGCAATTCTATAACAGAGCACTATTTTGCCTCATTACTCTGGGAGGCTGTGTACGGTGTGTaGAAATTTGCAGATACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RETSNSITEHYFASLLWEAVYGV*KFADTL Trigger: TAAGGTATCTGCAAATTTGCACACACCGTACACAGC...CTCCCAGAGTAATGAGGCAAAATAGTGCTCTGTTATAGAATTGCTTGTTTCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR GCA 90 bp | CGTGAAACAAGCAATTCTATAACAGAGCACTATTTTGCCTCATTACTCTGGGAGAACAGAGCACTATTTTaGCTCATTACTCTGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RETSNSITEHYFASLLWENRALF*LITLGA Trigger: TGCTCCCAGAGTAATGAGGCAAAATAGTGCTCTGTT...CTCCCAGAGTAATGAGGCAAAATAGTGCTCTGTTATAGAATTGCTTGTTTCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR GCA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCAGCCCACCACTGCTCATaGTCACTTACAGGTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSFNHYPSGTQDTQISAHHCS*SLTGLV Trigger: GACTAAACCTGTAAGTGAGCATGAGCAGTGGTGGGC...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATGCAGTTTGTGTTACATaGGCGCTTTTCTTATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSTFEVSEDPHMPERNAVCVT*ALFLSL Trigger: TAAAGATAAGAAAAGCGCCCATGTAACACAAACTGC...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR CCA 90 bp | TGCAGATACCTTACCATCACATGCAAGTGTCTTACTGCTACTGAAAGCTATCAGGAATTTCCCAAGTTGTaGCAAGTGTTATTAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CRYLTITCKCLTATESYQEFPKL*QVLLAL Trigger: CAGTGCTAATAACACTTGCCACAACTTGGGAAATTC...CTGATAGCTTTCAGTAGCAGTAAGACACTTGCATGTGATGGTAAGGTATCTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATCTTCCTTCTTTTCAGTaGATGCCCAATAAATTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSTFEVSEDPHMPERNLPSFQ*MPNKFN Trigger: GTTGAATTTATTGGGCATCCACTGAAAAGAAGGAAG...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCAGTGAGCCACTGTGCCTaGCTTTCCACTGACTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSFNHYPSGTQDTQISVSHCA*LSTDFL Trigger: TAGAAAGTCAGTGGAAAGCCAGGCACAGTGGCTCAC...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR TCA 90 bp | TGCAGATACCTTACCATCACATGCAAGTGTCTTACTGCTACTGAAAGCTATCAGCCACTTCCATTTACTTaGGTTTTAGACATCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CRYLTITCKCLTATESYQPLPFT*VLDIQL Trigger: AAGTTGGATGTCTAAAACTCAAGTAAATGGAAGTGG...CTGATAGCTTTCAGTAGCAGTAAGACACTTGCATGTGATGGTAAGGTATCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR GCA 90 bp | GCAGCAATATCCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAAATACTTTGCATAAAACTTTaGTCCAAAGAGGGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAISKISRICRSTATPEILCIKL*SKEGAA Trigger: TGCTGCTCCCTCTTTGGAGCAAAGTTTTATGCAAAG...TATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGATATTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399489.5 |
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| CDS-3UTR GCA 90 bp | GCAGCAATATCCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAAATAAAAGGTCAGAAAACATaGTGCCAATTCGTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAISKISRICRSTATPEIKGQKT*CQFVAL Trigger: CAAAGCCACGAATTGGCAGCATGTTTTCTGACCTTT...TATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGATATTGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399489.5 |
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| CDS-3UTR CCA 90 bp | TGCAGATACCTTACCATCACATGCAAGTGTCTTACTGCTACTGAAAGCTATCAGACCACCATCTTTTGCTaGATAGACAATCAAATCACT | + |
|
Preference number: 4 (lower is better) Translates to: CRYLTITCKCLTATESYQTTIFC*IDNQIT Trigger: AGTGATTTGATTGTCTATCCAGCAAAAGATGGTGGT...CTGATAGCTTTCAGTAGCAGTAAGACACTTGCATGTGATGGTAAGGTATCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | TTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCCATTTTGACCAAAAGGACTTCTaGAATATGCTGCCCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEHQTILIFRLKRGFVHFDQKDF*NMLPPR Trigger: TCTTGGGGGCAGCATATTCCAGAAGTCCTTTTGGTC...AAAATGGACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR CCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAACCCCAACAAACTGCTaGATTCCTTGGCCATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRTPTNC*IPWPFA Trigger: TGCAAATGGCCAAGGAATCCAGCAGTTTGTTGGGGT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| 3UTR CAA 72 bp | ATTCTAAGACTTAAGCTGTGTACGGTGTGTGCAAATTaGCAGATACCTTACCATCACATGCAAGTGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ILRLKLCTVCAN*QIPYHHMQVSY Trigger: GTAAGACACTTGCATGTGATGGTAAGGTATCTGCAAATTTGCACACACCGTACACAGCTTAAGTCTTAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR TCA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCATGCCTGGCTTTCCACTaGCTTTCTATTTCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSFNHYPSGTQDTQISCLAFH*LSISGF Trigger: GAATCCAGAAATAGAAAGTCAGTGGAAAGCCAGGCA...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAAGACCCACACATGCCTaGGAGAAATGTACAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRRPTHA*EKCTDV Trigger: AACATCTGTACATTTCTCTCAGGCATGTGTGGGTCT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR GCA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCAGGACTTCTGGAATATaGTGCCCCCAAGATTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILLEHQTILIFRLKRGFVRTSGI*CPQDLE Trigger: TTCTAAATCTTGGGGGCAGCATATTCCAGAAGTCCT...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR GCA 90 bp | TTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCCATTTTGAAACCCCAACAAACTaGTGGATTCCTTGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LEHQTILIFRLKRGFVHFETPTN*WIPWPF Trigger: AAATGGCCAAGGAATCCAGCAGTTTGTTGGGGTTTC...AAAATGGACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR GCA 90 bp | GCAGCAATATCCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAAATATCCTTGAAGGGGCTATaGCAAGCAAACAAAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AAISKISRICRSTATPEISLKGL*QANKTK Trigger: TTTTGTTTTGTTTGCTTGGCATAGCCCCTTCAAGGA...TATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGATATTGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399489.5 |
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| CDS-3UTR CCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAACTCTGGGAGCAATGTaGCATAGACCCATGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRTLGAM*HRPMEF Trigger: AAATTCCATGGGTCTATGCCACATTGCTCCCAGAGT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCATGGAGCACCATACTGTaGAATGTCACGTACATGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSFNHYPSGTQDTQISWSTIL*NVTYMT Trigger: AGTCATGTACGTGACATTCCACAGTATGGTGCTCCA...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAACATTAACAACACTGTaGTGGGACGATCATCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRTLTTL*WDDHQN Trigger: GTTCTGATGATCGTCCCATCACAGTGTTGTTAATGT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
||
| CDS-3UTR TCA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCAAGGGAAATACCTGTTaGATGGCAGTTTGTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: ILLEHQTILIFRLKRGFVKGNTC*MAVCVT Trigger: TGTAACACAAACTGCCATTCAACAGGTATTTCCCTT...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAACTTCTGGAATATGCTaGCCCCAAGATTTAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRTSGIC*PQDLEC Trigger: GCATTCTAAATCTTGGGGGCAGCATATTCCAGAAGT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR CCA 90 bp | TTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCCATTTTAACTGCTGGATTCCTTaGCCATTTGCATTCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LEHQTILIFRLKRGFVHFNCWIP*PFAFRS Trigger: ACTTCTGAATGCAAATGGCCAAGGAATCCAGCAGTT...AAAATGGACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS-3UTR CCA 90 bp | TTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCCATTTTCAGCCTATTTTTGTCTaGAGAAACCCCAACAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LEHQTILIFRLKRGFVHFQPIFV*RNPNKL Trigger: CAGTTTGTTGGGGTTTCTCCAGACAAAAATAGGCTG...AAAATGGACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS-3UTR GCA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCGATTCCTTGGCCATTTaGATTCAGAAGTACCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILLEHQTILIFRLKRGFVDSLAI*IQKYQK Trigger: TTTTTGGTACTTCTGAATGCAAATGGCCAAGGAATC...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGACCACTTCCATTTACTTaGGTTTTAGACATCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRPLPFT*VLDIQL Trigger: AAGTTGGATGTCTAAAACTCAAGTAAATGGAAGTGG...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAGGAATGTCACGTACATaGCTGAATTATGTGACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KALHLSKLPPTSIYLSFRGMSRT*LNYVTK Trigger: TTTAGTCACATAATTCAGTCATGTACGTGACATTCC...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CCA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCACATATTCTGGAGTGTaGCATATTATGTTTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLEHQTILIFRLKRGFVTYSGV*HIMFVS Trigger: TGACACAAACATAATATGCCACACTCCAGAATATGT...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| 3UTR CAA 72 bp | ATCATCTTCAGTTACAAGGCTTTACACTTATCTAAATaGCCTCCCACTTCCATTTACTTGAGTTTTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: IIFSYKALHLSK*PPTSIYLSFRH Trigger: ATGTCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTTGTAACTGAAGATGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
||
| CDS TCA 90 bp | AGGCTTTGGGAGAGCGGACTACGGATGCCCGGCGCGGCCCAGCTGTaGAGGCCGCGCCGGCGGAGAGGGTCCATGGCACCCCCGCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLWESGLRMPGAAQL*RPRRRRGSMAPPPA Trigger: AGCCGGCGGGGGTGCCATGGACCCTCTCCGCCGGCGCGGCCTTCACAGCTGGGCCGCGCCGGGCATCCGTAGTCCGCTCTCCCAAAGCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS TCA 90 bp | TCTAGGGAGACAGGGAGGGGCAGCTCCGTGTGTGATGACCCTTTGTaGACATGCACTCTGTGGCAGCTTCAGCTCCACCGAGGCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRETGRGSSVCDDPL*TCTLWQLQLHRGFG Trigger: CCCAAAGCCTCGGTGGAGCTGAAGCTGCCACAGAGTGCATGTTCACAAAGGGTCATCACACACGGAGCTGCCCCTCCCTGTCTCCCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS CCA 90 bp | AGAGCAGCAGGGACAGATCGGCTGTTGACTAGTCAGAACGGGTCGTaGAATGCAAAGTCCCTGCGCTTTCGCTGCTCCCCTTACCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RAAGTDRLLTSQNGS*NAKSLRFRCSPYRE Trigger: CTCACGGTAAGGGGAGCAGCGAAAGCGCAGGGACTTTGCATTCCACGACCCGTTCTGACTAGTCAACAGCCGATCTGTCCCTGCTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS GCA 90 bp | ACTAGTCAGAACGGGTCGTGGAATGCAAAGTCCCTGCGCTTTCGCTaGTCCCCTTACCGTGAGAAGATCTGGGAGGGAGGAAAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSQNGSWNAKSLRFR*SPYREKIWEGGKEE Trigger: CTCCTCCTTTCCTCCCTCCCAGATCTTCTCACGGTAAGGGGAGCAGCGAAAGCGCAGGGACTTTGCATTCCACGACCCGTTCTGACTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS TCA 90 bp | AAGGCAGGGCAGCTGGAATTAGAGCAGCAGGGACAGATCGGCTGTTaGCTAGTCAGAACGGGTCGTGGAATGCAAAGTCCCTGCGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAGQLELEQQGQIGC*LVRTGRGMQSPCAF Trigger: GAAAGCGCAGGGACTTTGCATTCCACGACCCGTTCTGACTAGTCAACAGCCGATCTGTCCCTGCTGCTCTAATTCCAGCTGCCCTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR CAA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTACTGAGGCGGGAGGATaGTTTGAGCAGATTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGTEAGG*FEQIWR Trigger: TCTCCAAATCTGCTCAAACAATCCTCCCGCCTCAGT...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CAA 90 bp | GGATTCCAGAGTCTGCATACCCTTGCCCACCACTGCTCATGCTCACTTACAGGTATGAACCACCATCTTTaGCTGGATAGACAATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GFQSLHTLAHHCSCSLTGMNHHL*LDRQSN Trigger: ATTTGATTGTCTATCCAGCAAAAGATGGTGGTTCAT...ACCTGTAAGTGAGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCTGGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CAA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATAGGCGGGAGGATTGTTaGAGCAGATTTGGAGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSSSTFEVSEDPHMPERNRREDC*SRFGDQ Trigger: TTGGTCTCCAAATCTGCTCAAACAATCCTCCCGCCT...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR CAA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCAGCTCCACCGAGGCTTaGGGAGAGCGGACTACGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ILLEHQTILIFRLKRGFVSSTEA*GERTTD Trigger: ATCCGTAGTCCGCTCTCCCAAAGCCTCGGTGGAGCT...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS-3UTR CAA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCGGGACAGATCGGCTGTaGACTAGTCAGAACGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ILLEHQTILIFRLKRGFVGTDRL*TSQNGS Trigger: CGACCCGTTCTGACTAGTCAACAGCCGATCTGTCCC...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS TCA 90 bp | AGCCACATGACCTTCCTACGAAAGCAAAGGCTTAAACTTATCAAATaGGAACTCCCCCTTTCTCTGAAGTTAAAACAAGGCAGGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHMTFLRKQRLKLIK*ELPLSLKLKQGRAA Trigger: AGCTGCCCTGCCTTGTTTTAACTTCAGAGAAAGGGGGAGTTCTCATTTGATAAGTTTAAGCCTTTGCTTTCGTAGGAAGGTCATGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS-3UTR CAA 90 bp | CTCAGCAGTTCTACTTTTGAGGTATCTGAAGACCCACACATGCCTGAGAGAAATCTGTTGAATGGCAGTTaGTGTTACATGGGCGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSTFEVSEDPHMPERNLLNGS*CYMGAF Trigger: AAAAGCGCCCATGTAACACAAACTGCCATTCAACAG...ATTTCTCTCAGGCATGTGTGGGTCTTCAGATACCTCAAAAGTAGAACTGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR CAA 90 bp | TTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCCATTTTAGAGTCTGCATACCCTaGCCCACCACTGCTCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LEHQTILIFRLKRGFVHFRVCIP*PTTAHA Trigger: AGCATGAGCAGTGGTGGGCAAGGGTATGCAGACTCT...AAAATGGACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGACAAGGCCTCACTATGTaGCCCAGGCTAGTGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KALHLSKLPPTSIYLSFRQGLTM*PRLVSN Trigger: GTTTGACACTAGCCTGGGCAACATAGTGAGGCCTTG...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCAATATCCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAAATATCTTTGCATAAAACTTaGCTCCAAAGAGGGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAISKISRICRSTATPEISLHKT*LQRGSS Trigger: GCTGCTCCCTCTTTGGAGCAAAGTTTTATGCAAAGA...TATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGATATTGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399489.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGATCTTCTACACGAGACTaGTTTCCTCCACACCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: KALHLSKLPPTSIYLSFRSSTRD*FPPHHP Trigger: AGGGTGGTGTGGAGGAAACAAGTCTCGTGTAGAAGA...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS-3UTR CAA 90 bp | GCAGCAATATCCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAAATAGAGAGATTAAATTCCTaGAAGGGGCTATGCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAISKISRICRSTATPEIERLNS*KGLCQA Trigger: TGCTTGGCATAGCCCCTTCAAGGAATTTAATCTCTC...TATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGATATTGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399489.5 |
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| CDS-3UTR CAA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCAACGGTGTGTGCAAATTaGCAGATACCTTACCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSFNHYPSGTQDTQISTVCAN*QIPYHH Trigger: GTGATGGTAAGGTATCTGCAAATTTGCACACACCGT...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAAAACTGCTGGATTCCTaGGCCATTTGCATTCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KALHLSKLPPTSIYLSFRKLLDS*AICIQK Trigger: CTTCTGAATGCAAATGGCCAAGGAATCCAGCAGTTT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR CAA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCAATAGCTCTCAACCTTaGCACAGCAAAGTTAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILLEHQTILIFRLKRGFVNSSQP*HSKVRK Trigger: TTTCCTAACTTTGCTGTGCAAAGGTTGAGAGCTATT...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
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| CDS-3UTR CAA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCATGGAATTTCCCAAGTaGTGGCAAGTGTTATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILLEHQTILIFRLKRGFVMEFPK*WQVLLA Trigger: TGCTAATAACACTTGCCACAACTTGGGAAATTCCAT...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS-3UTR CAA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCATACTAATCTTCAGATaGAAGAGGGGTTTTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ILLEHQTILIFRLKRGFVILIFR*KRGFVH Trigger: ATGGACAAAACCCCTCTTCAATCTGAAGATTAGTAT...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
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| CDS-3UTR CAA 90 bp | ATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCTTACACTTATCTAAATaGCCTCCCACTTCCATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: ILLEHQTILIFRLKRGFVLHLSK*PPTSIY Trigger: GTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAA...GACAAAACCCCTCTTCAATCTGAAGATTAGTATGGTTTGGTGTTCTAACAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAAATAGCTCTCAACCTTaGCACAGCAAAGTTAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KALHLSKLPPTSIYLSFRNSSQP*HSKVRK Trigger: TTTCCTAACTTTGCTGTGCAAAGGTTGAGAGCTATT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341423.10 ENST00000405805.5 |
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| CDS-3UTR CAA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCAGTTATTAGCACTGCCTaGGTATTAAGAGGACAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSLSFNHYPSGTQDTQISVISTA*VLRGQE Trigger: TTCTTGTCCTCTTAATACCAAGGCAGTGCTAATAAC...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341423.10 |
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| CDS-3UTR CAA 90 bp | AAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGAACCACCCTATCCAAATaGTCAGCATTATTCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KALHLSKLPPTSIYLSFRTTLSK*SALFQN Trigger: ATTCTGGAATAATGCTGACAATTTGGATAGGGTGGT...TCTAAAACTCAAGTAAATGGAAGTGGGAGGCAATTTAGATAAGTGTAAAGCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS-3UTR CAA 90 bp | TTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCAATACTAATCTTCAGATaGAAGAGGGGTTTTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLSFNHYPSGTQDTQISILIFR*KRGFVH Trigger: ATGGACAAAACCCCTCTTCAATCTGAAGATTAGTAT...TGAAATTTGTGTGTCCTGTGTACCCGAGGGGTAATGATTAAATGATAAAGATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341423.10 |
||
| CDS TCA 72 bp | GAGAGCGGACTACGGATGCCCGGCGCGGCCCAGCTGTaGAGGCCGCGCCGGCGGAGAGGGTCCATGGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: ESGLRMPGAAQL*RPRRRRGSMAP Trigger: GGGTGCCATGGACCCTCTCCGCCGGCGCGGCCTTCACAGCTGGGCCGCGCCGGGCATCCGTAGTCCGCTCTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS GCA 72 bp | CAGCTCCACCGAGGCTTTGGGAGAGCGGACTACGGATaGCCGGCGCGGCCCAGCTGTGAAGGCCGCGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLHRGFGRADYG*PARPSCEGRAG Trigger: GCCGGCGCGGCCTTCACAGCTGGGCCGCGCCGGGCATCCGTAGTCCGCTCTCCCAAAGCCTCGGTGGAGCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS CCA 72 bp | GGGAGCAGCAGCCAGCTCCGGTGCTCGGAACCCGGTTaGGGGGTGGCGGTGCCACCGCGAGGCAGCCTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: GSSSQLRCSEPG*GVAVPPRGSLV Trigger: AACGAGGCTGCCTCGCGGTGGCACCGCCACCCCCCAACCGGGTTCCGAGCACCGGAGCTGGCTGCTGCTCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339872.8 |
||
| CDS CCA 72 bp | ATGCACTCTGTGGCAGCTTCAGCTCCACCGAGGCTTTaGGAGAGCGGACTACGGATGCCCGGCGCGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: MHSVAASAPPRL*ESGLRMPGAAQ Trigger: CTGGGCCGCGCCGGGCATCCGTAGTCCGCTCTCCCAAAGCCTCGGTGGAGCTGAAGCTGCCACAGAGTGCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS CAA 72 bp | CATGCACTCTGTGGCAGCTTCAGCTCCACCGAGGCTTaGGGAGAGCGGACTACGGATGCCCGGCGCGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HALCGSFSSTEA*GERTTDARRGP Trigger: TGGGCCGCGCCGGGCATCCGTAGTCCGCTCTCCCAAAGCCTCGGTGGAGCTGAAGCTGCCACAGAGTGCATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS CAA 90 bp | CTTTGTGAACATGCACTCTGTGGCAGCTTCAGCTCCACCGAGGCTTaGGGAGAGCGGACTACGGATGCCCGGCGCGGCCCAGCTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LCEHALCGSFSSTEA*GERTTDARRGPAVK Trigger: CTTCACAGCTGGGCCGCGCCGGGCATCCGTAGTCCGCTCTCCCAAAGCCTCGGTGGAGCTGAAGCTGCCACAGAGTGCATGTTCACAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405805.5 |
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| CDS GCA 72 bp | AACGGGTCGTGGAATGCAAAGTCCCTGCGCTTTCGCTaGTCCCCTTACCGTGAGAAGATCTGGGAGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: NGSWNAKSLRFR*SPYREKIWEGG Trigger: TCCTCCCTCCCAGATCTTCTCACGGTAAGGGGAGCAGCGAAAGCGCAGGGACTTTGCATTCCACGACCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS CCA 72 bp | GGGACAGATCGGCTGTTGACTAGTCAGAACGGGTCGTaGAATGCAAAGTCCCTGCGCTTTCGCTGCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GTDRLLTSQNGS*NAKSLRFRCSP Trigger: AGGGGAGCAGCGAAAGCGCAGGGACTTTGCATTCCACGACCCGTTCTGACTAGTCAACAGCCGATCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS CAA 90 bp | CAAGGCAGGGCAGCTGGAATTAGAGCAGCAGGGACAGATCGGCTGTaGACTAGTCAGAACGGGTCGTGGAATGCAAAGTCCCTGCGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QGRAAGIRAAGTDRL*TSQNGSWNAKSLRF Trigger: AAAGCGCAGGGACTTTGCATTCCACGACCCGTTCTGACTAGTCAACAGCCGATCTGTCCCTGCTGCTCTAATTCCAGCTGCCCTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS TCA 72 bp | CAGCTGGAATTAGAGCAGCAGGGACAGATCGGCTGTTaGCTAGTCAGAACGGGTCGTGGAATGCAAAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QLELEQQGQIGC*LVRTGRGMQSP Trigger: GGGACTTTGCATTCCACGACCCGTTCTGACTAGTCAACAGCCGATCTGTCCCTGCTGCTCTAATTCCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS CAA 72 bp | GCAGCTGGAATTAGAGCAGCAGGGACAGATCGGCTGTaGACTAGTCAGAACGGGTCGTGGAATGCAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AAGIRAAGTDRL*TSQNGSWNAKS Trigger: GGACTTTGCATTCCACGACCCGTTCTGACTAGTCAACAGCCGATCTGTCCCTGCTGCTCTAATTCCAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS GCA 72 bp | ACACAGAACCAATCGACCAAAAGGACTTCTGGAATATaGTGCCCCCAAGATTTAGAATGCACAGGCAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TQNQSTKRTSGI*CPQDLECTGRN Trigger: ATTTCTGCCTGTGCATTCTAAATCTTGGGGGCAGCATATTCCAGAAGTCCTTTTGGTCGATTGGTTCTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS CCA 72 bp | AGCCTATTTTTGTCTGGAGAAACCCCAACAAACTGCTaGATTCCTTGGCCATTTGCATTCAGAAGTACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLFLSGETPTNC*IPWPFAFRSTK Trigger: TTTGGTACTTCTGAATGCAAATGGCCAAGGAATCCAGCAGTTTGTTGGGGTTTCTCCAGACAAAAATAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS TCA 72 bp | ACCTTCCTACGAAAGCAAAGGCTTAAACTTATCAAATaGGAACTCCCCCTTTCTCTGAAGTTAAAACAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TFLRKQRLKLIK*ELPLSLKLKQG Trigger: GCCTTGTTTTAACTTCAGAGAAAGGGGGAGTTCTCATTTGATAAGTTTAAGCCTTTGCTTTCGTAGGAAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000405805.5 |
||
| CDS CAA 72 bp | TTTGCATCCTCAATTGGAAACTGTCTTTTAATTACCTaGTTAGCATGTTTTAAGCCCTCTTACCTTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: FASSIGNCLLIT*LACFKPSYLPP Trigger: AGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGTAATTAAAAGACAGTTTCCAATTGAGGATGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468384.1 |
||
| CDS CAA 90 bp | AACTTATTACACCTCAAACTAAGTACAATCATACATCTGGCGTACTaGTCATCATTTTACCAAGCAAACCCACACTTCTTACCTTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: NLLHLKLSTIIHLAY*SSFYQANPHFLPFH Trigger: ATGAAAAGGTAAGAAGTGTGGGTTTGCTTGGTAAAATGATGACAAGTACGCCAGATGTATGATTGTACTTAGTTTGAGGTGTAATAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490788.1 |
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