RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HMGA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000149948

Ensembl transcript IDs: ENST00000354636.7, ENST00000393577.7, ENST00000393578.7, ENST00000403681.7, ENST00000425208.6, ENST00000536545.5, ENST00000537275.5, ENST00000537429.5, ENST00000539662.1, ENST00000541363.5, ENST00000545998.1

Found 864 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGAGGAACCCCCGCAATTGGAATCTCTCCATGCCTTCTGCAGCATaGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTC +
Preference number: 1 (lower is better)
Translates to: RRNPRNWNLSMPSAA*KHTPGPTGALSGHL
Trigger: GAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR GCA 90 bp TGCCAGCGACTGACCGCCCAGGGACAGGAGATGGAGACGTTCAGCTaGAAAGGCTACGGAGGAACCCCCGCAATTGGAATCTCTCCATGC +
Preference number: 1 (lower is better)
Translates to: CQRLTAQGQEMETFS*KGYGGTPAIGISPC
Trigger: GCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACGTCTCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR GCA 90 bp AAGGCTACGGAGGAACCCCCGCAATTGGAATCTCTCCATGCCTTCTaGAGCATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGG +
Preference number: 1 (lower is better)
Translates to: KATEEPPQLESLHAF*SMETYSGTYRGSLG
Trigger: CCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR GCA 90 bp GTGGCGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTaGAGTTCAAGGAAGGGAATGTGTCTGTCATCCCACCACTTGCGC +
Preference number: 1 (lower is better)
Translates to: VAGLSRATSECKGKE*SSRKGMCLSSHHLR
Trigger: GCGCAAGTGGTGGGATGACAGACACATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR GCA 90 bp CTACCGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTaGAGTTCAAGGAAGGGAATGTGTCTGTCATCCCACCACTTGCGC +
Preference number: 1 (lower is better)
Translates to: LPGLSRATSECKGKE*SSRKGMCLSSHHLR
Trigger: GCGCAAGTGGTGGGATGACAGACACATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR GCA 90 bp AGCTGCAAAGGCTACGGAGGAACCCCCGCAATTGGAATCTCTCCATaGCTTCTGCAGCATGGAAACATACTCCGGGACCTACCGGGGCTC +
Preference number: 1 (lower is better)
Translates to: SCKGYGGTPAIGISP*LLQHGNILRDLPGL
Trigger: GAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR TCA 90 bp GATAGACAACTGGGAGGTAAAACTCCACAGAGCCATGCCAGCGACTaGCCGCCCAGGGACAGGAGATGGAGACGTTCAGCTGCAAAGGCT +
Preference number: 1 (lower is better)
Translates to: DRQLGGKTPQSHASD*PPRDRRWRRSAAKA
Trigger: AGCCTTTGCAGCTGAACGTCTCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCATGGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR GCA 90 bp AAGAGTGCAGTTCAAGGAAGGGAATGTGTCTGTCATCCCACCACTTaGGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGC +
Preference number: 1 (lower is better)
Translates to: KSAVQGRECVCHPTT*AQGQFRDQQASFTS
Trigger: GCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCCTTGAACTGCACTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR CCA 90 bp CTCATTCCCCTCCGGACAAGGTGGACAGCTTTGGTGATAGACAACTaGGAGGTAAAACTCCACAGAGCCATGCCAGCGACTGACCGCCCA +
Preference number: 1 (lower is better)
Translates to: LIPLRTRWTALVIDN*EVKLHRAMPATDRP
Trigger: TGGGCGGTCAGTCGCTGGCATGGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTTGTCCGGAGGGGAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR TCA 90 bp TGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTaGGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAATGTGTCT +
Preference number: 1 (lower is better)
Translates to: WKHTPGPTGALSGHL*VQGKRVQFKEGNVS
Trigger: AGACACATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR GCA 90 bp AACATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTaGAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAATGTGTCTGTCA +
Preference number: 1 (lower is better)
Translates to: NILRDLPGLSRATSE*KGKECSSRKGMCLS
Trigger: TGACAGACACATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR TCA 90 bp GTGGTCACTGCAGTGTCTTCTCCCTTCAAAAGATCCAACTGCTGCTaGGGTAGAAATCGAACGTTGGCGCCCCCTAGTCCTCTTCGGCAG +
Preference number: 1 (lower is better)
Translates to: VVTAVSSPFKRSNCC*GRNRTLAPPSPLRQ
Trigger: CTGCCGAAGAGGACTAGGGGGCGCCAACGTTCGATTTCTACCTCAGCAGCAGTTGGATCTTTTGAAGGGAGAAGACACTGCAGTGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR CCA 90 bp GATGGAGACGTTCAGCTGCAAAGGCTACGGAGGAACCCCCGCAATTaGAATCTCTCCATGCCTTCTGCAGCATGGAAACATACTCCGGGA +
Preference number: 1 (lower is better)
Translates to: DGDVQLQRLRRNPRN*NLSMPSAAWKHTPG
Trigger: TCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACGTCTCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR TCA 90 bp GAAATCGAACGTTGGCGCCCCCTAGTCCTCTTCGGCAGACTCTTGTaGGGATGTCTCTTCAGTTTCCTCCTGAGCAGGCTTCTTCTGAAC +
Preference number: 1 (lower is better)
Translates to: EIERWRPLVLFGRLL*GCLFSFLLSRLLLN
Trigger: GTTCAGAAGAAGCCTGCTCAGGAGGAAACTGAAGAGACATCCTCACAAGAGTCTGCCGAAGAGGACTAGGGGGCGCCAACGTTCGATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR GCA 90 bp TCTGAACAACTTGTTGTGGCGGGGCTCTCTCGGGCCACCTCTGAGTaGAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAATGTGTCTGTCA +
Preference number: 1 (lower is better)
Translates to: SEQLVVAGLSRATSE*KGKECSSRKGMCLS
Trigger: TGACAGACACATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGCCACAACAAGTTGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR TCA 90 bp AAAACTCCATCCAAAGTTCTTCTCCTGCAGGCAGCCTTACGGCTCTaGCTAATAGCTCATGCCTCAACTCTGTGTCCCCACAAGACTCAT +
Preference number: 1 (lower is better)
Translates to: KTPSKVLLLQAALRL*LIAHASTLCPHKTH
Trigger: ATGAGTCTTGTGGGGACACAGAGTTGAGGCATGAGCTATTAGTCAGAGCCGTAAGGCTGCCTGCAGGAGAAGAACTTTGGATGGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR TCA 90 bp TGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCTaGGGAGACTTCAGCATTGGGCAGTATGAGGATACTTCACCACAG +
Preference number: 1 (lower is better)
Translates to: CCFVPQVQQGPFLKF*GDFSIGQYEDTSPQ
Trigger: CTGTGGTGAAGTATCCTCATACTGCCCAATGCTGAAGTCTCCTCAGAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR GCA 90 bp AGTTCTTCTCCTGCAGGCAGCCTTACGGCTCTGACTAATAGCTCATaGCTCAACTCTGTGTCCCCACAAGACTCATATCCTCCACTTTTA +
Preference number: 1 (lower is better)
Translates to: SSSPAGSLTALTNSS*LNSVSPQDSYPPLL
Trigger: TAAAAGTGGAGGATATGAGTCTTGTGGGGACACAGAGTTGAGGCATGAGCTATTAGTCAGAGCCGTAAGGCTGCCTGCAGGAGAAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR CCA 90 bp CCCACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTaGTCACTGCAGTGTCTTCTCCCTTCAAAAGATCCAACTGCTGCT +
Preference number: 1 (lower is better)
Translates to: PTPDESGKTMAIQNK*SLQCLLPSKDPTAA
Trigger: AGCAGCAGTTGGATCTTTTGAAGGGAGAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403681.7
ENST00000539662.1
3UTR CCA 90 bp AGTCCTTATCTTTGGTGTTCTAAACAGAGGATTCACTACAGGGAGTaGGTTGGGGTGGTATTTGAGGTGTACACAGTGTTACACACCGCG +
Preference number: 1 (lower is better)
Translates to: SPYLWCSKQRIHYRE*VGVVFEVYTVLHTA
Trigger: CGCGGTGTGTAACACTGTGTACACCTCAAATACCACCCCAACCCACTCCCTGTAGTGAATCCTCTGTTTAGAACACCAAAGATAAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR TCA 90 bp CGTCACAAGTGTGACACGTTTCTTGTTTGCATGCAGTGCAGTGATTaGCTAAACCCAATTCGGTTTTTCTCACCCGCCCACTCTTGCTTA +
Preference number: 1 (lower is better)
Translates to: RHKCDTFLVCMQCSD*LNPIRFFSPAHSCL
Trigger: TAAGCAAGAGTGGGCGGGTGAGAAAAACCGAATTGGGTTTAGTCAATCACTGCACTGCATGCAAACAAGAAACGTGTCACACTTGTGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR GCA 90 bp AGGGGGAAGAAATCCCGTGATAATCAAGGCTTACTGAGATTTCTTTaGCCGGGTGCACACCACCCACAGAAGATGTTACTTGCAAGTAAA +
Preference number: 1 (lower is better)
Translates to: RGKKSRDNQGLLRFL*PGAHHPQKMLLASK
Trigger: TTTACTTGCAAGTAACATCTTCTGTGGGTGGTGTGCACCCGGGCAAAGAAATCTCAGTAAGCCTTGATTATCACGGGATTTCTTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 90 bp ATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTaGAGTTCTGAGGAGACTTCAGCATTGGGCAGTATGAGGATACTT +
Preference number: 1 (lower is better)
Translates to: INSAALYPRFNKGHS*SSEETSALGSMRIL
Trigger: AAGTATCCTCATACTGCCCAATGCTGAAGTCTCCTCAGAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR GCA 90 bp AGATGGAAATCACTCGGTGCACCATGTTTGGCCAACATGAGCAATTaGTTCCATTTTATGAGCTGGCCAATGAGGTTTCTAAAAGGCCCA +
Preference number: 1 (lower is better)
Translates to: RWKSLGAPCLANMSN*FHFMSWPMRFLKGP
Trigger: TGGGCCTTTTAGAAACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACATGGTGCACCGAGTGATTTCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR GCA 90 bp TCTCATTGGGAAATTGAAAAGGAGCAGGTTTATACCTGTCCTAATTaGCAGAGGCATCGTTTGCCAGGGCTGTACAACAATGGGGAAAGT +
Preference number: 1 (lower is better)
Translates to: SHWEIEKEQVYTCPN*QRHRLPGLYNNGES
Trigger: ACTTTCCCCATTGTTGTACAGCCCTGGCAAACGATGCCTCTGGCAATTAGGACAGGTATAAACCTGCTCCTTTTCAATTTCCCAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CCA 90 bp GCACCATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTaGCCAATGAGGTTTCTAAAAGGCCCATCCAAAGATATGGAATGC +
Preference number: 1 (lower is better)
Translates to: APCLANMSNCFHFMS*PMRFLKGPSKDMEC
Trigger: GCATTCCATATCTTTGGATGGGCCTTTTAGAAACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACATGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR CCA 90 bp GACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCTaGTTCTTGGTAGTAGATTGTCCTGTGGATATGACATCAGGATGG +
Preference number: 1 (lower is better)
Translates to: DSFWYCFPEMFSSWS*FLVVDCPVDMTSGW
Trigger: CCATCCTGATGTCATATCCACAGGACAATCTACTACCAAGAACCAGCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR TCA 90 bp ACTCTGTGTCCCCACAAGACTCATATCCTCCACTTTTACACAACTTaGACTTGGCAGAAGTGTTCTTCAGTTGATTCATGTGTGCTCAGT +
Preference number: 1 (lower is better)
Translates to: TLCPHKTHILHFYTT*TWQKCSSVDSCVLS
Trigger: ACTGAGCACACATGAATCAACTGAAGAACACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAGTCTTGTGGGGACACAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR TCA 90 bp GATACGCTTCCTCTGCCCTCCAATTTCCCTGTGCTTCTATGTCCTTaGGCTACTTTATTAAGGGTTAAACCTTGGTTTCTACTTTGCTCT +
Preference number: 1 (lower is better)
Translates to: DTLPLPSNFPVLLCP*ATLLRVKPWFLLCS
Trigger: AGAGCAAAGTAGAAACCAAGGTTTAACCCTTAATAAAGTAGCTCAAGGACATAGAAGCACAGGGAAATTGGAGGGCAGAGGAAGCGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 90 bp TTAAGCATCTGTTTTATGAAATCAAACCACACCATAGCCACACTGTaGTTTCTGCAAAAAGGTGGATCCCTGTACGAGAGTAACTGGAGT +
Preference number: 1 (lower is better)
Translates to: LSICFMKSNHTIATL*FLQKGGSLYESNWS
Trigger: ACTCCAGTTACTCTCGTACAGGGATCCACCTTTTTGCAGAAATCACAGTGTGGCTATGGTGTGGTTTGATTTCATAAAACAGATGCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354636.7
3UTR TCA 90 bp AGTAGATTGTCCTGTGGATATGACATCAGGATGGGGCATATGGCATaGATACCTCAGAAGAGATCTAGTGATGGAACACTAATAGACATT +
Preference number: 1 (lower is better)
Translates to: SRLSCGYDIRMGHMA*IPQKRSSDGTLIDI
Trigger: AATGTCTATTAGTGTTCCATCACTAGATCTCTTCTGAGGTATTCATGCCATATGCCCCATCCTGATGTCATATCCACAGGACAATCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR TCA 90 bp AAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATAACATaGAGAGCTATCCTGGACTCCTCCAATGACAATTCAGTGACTCCT +
Preference number: 1 (lower is better)
Translates to: KAHRCNGQFLKVKIT*RAILDSSNDNSVTP
Trigger: AGGAGTCACTGAATTGTCATTGGAGGAGTCCAGGATAGCTCTTCATGTTATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR GCA 90 bp ACACAACTTGAACTTGGCAGAAGTGTTCTTCAGTTGATTCATGTGTaGTCAGTCCAACTGATTTGTCAGTATCATGAGGATACGGTTTTG +
Preference number: 1 (lower is better)
Translates to: TQLELGRSVLQLIHV*SVQLICQYHEDTVL
Trigger: CAAAACCGTATCCTCATGATACTGACAAATCAGTTGGACTGAGCACACATGAATCAACTGAAGAACACTTCTGCCAAGTTCAAGTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR GCA 90 bp ACAGGAAATAAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTaGACCATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAG +
Preference number: 1 (lower is better)
Translates to: TGNKSVTLPEMEITR*TMFGQHEQLLPFYE
Trigger: CTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTTATTTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR GCA 90 bp CTGAGATTTATCATAATTCTGAATTTGTCTCCTCAGAATAAACTCTaGTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTC +
Preference number: 1 (lower is better)
Translates to: LRFIIILNLSPQNKL*CFVPQVQQGPFLKF
Trigger: GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATTCTGAGGAGACAAATTCAGAATTATGATAAATCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 90 bp ATTTCCTATACAACAAAACCGTGCAACTTAGGGCAACCTTTGATATaGTTCTTCATGTTTTGCCAGTTGGTACTAAACATTTACTGGCCC +
Preference number: 1 (lower is better)
Translates to: ISYTTKPCNLGQPLI*FFMFCQLVLNIYWP
Trigger: GGGCCAGTAAATGTTTAGTACCAACTGGCAAAACATGAAGAATCATATCAAAGGTTGCCCTAAGTTGCACGGTTTTGTTGTATAGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 90 bp GTTAGAAGTTGTCATCTCTATAAAACATTTCCTGCCAAGAACCGCTaGCTTCATCCTGCCAATATTCCTGTATTACAACTGTTAGCTAAG +
Preference number: 1 (lower is better)
Translates to: VRSCHLYKTFPAKNR*LHPANIPVLQLLAK
Trigger: CTTAGCTAACAGTTGTAATACAGGAATATTGGCAGGATGAAGTCAGCGGTTCTTGGCAGGAAATGTTTTATAGAGATGACAACTTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CCA 90 bp AGTTTGAATGAAGAGATGGTGAACTCAAGCCGAAGAAAAGCACCTTaGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTAACACAT +
Preference number: 1 (lower is better)
Translates to: SLNEEMVNSSRRKAP*STILCQNVLLEVTH
Trigger: ATGTGTTACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCGGCTTGAGTTCACCATCTCTTCATTCAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR GCA 90 bp CAACCATTAAGGATTTTCTTAGAAAGACCAGGTTTTAAAGCCAGTTaGTATTTGTTCCACATTAATTTGGGTCAGCAAGTTTGGAGAGTA +
Preference number: 1 (lower is better)
Translates to: QPLRIFLERPGFKAS*YLFHINLGQQVWRV
Trigger: TACTCTCCAAACTTGCTGACCCAAATTAATGTGGAACAAATAGCAACTGGCTTTAAAACCTGGTCTTTCTAAGAAAATCCTTAATGGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CCA 90 bp TATTTGCTTTGTACACTTAAGACCTTACATTTTGGGAGGTTTTCATaGTACGATTGCAGACTATATATTCCTAACTTTGAAGGCTACAAC +
Preference number: 1 (lower is better)
Translates to: YLLCTLKTLHFGRFS*YDCRLYIPNFEGYN
Trigger: GTTGTAGCCTTCAAAGTTAGGAATATATAGTCTGCAATCGTACCATGAAAACCTCCCAAAATGTAAGGTCTTAAGTGTACAAAGCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp CCATGCCAGCGACTGACCGCCCAGGGACAGGAGATGGAGACGTTCAGCTGCAAACTCTCGGGCCACCTCTaGGTGCAAGGGAAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: PCQRLTAQGQEMETFSCKLSGHL*VQGKRV
Trigger: CACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAG...TTTGCAGCTGAACGTCTCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR-3UTR GCA 90 bp ATGCCAGCGACTGACCGCCCAGGGACAGGAGATGGAGACGTTCAGCTGCAAAGGCGGGCCACCTCTGAGTaGAAGGGAAAAGAGTGCAGT +
Preference number: 2 (lower is better)
Translates to: MPATDRPGTGDGDVQLQRRATSE*KGKECS
Trigger: ACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCG...CCTTTGCAGCTGAACGTCTCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR-3UTR GCA 90 bp TGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCCAAAGTTCTTCTCCTaGAGGCAGCCTTACGGCTCT +
Preference number: 2 (lower is better)
Translates to: CLSSHHLRARPVPGSAGFPKFFS*RQPYGS
Trigger: AGAGCCGTAAGGCTGCCTGCAGGAGAAGAACTTTGG...GAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR-3UTR GCA 90 bp TCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAATGTCATCCCACCACTTaGGCGCAAGGCCAGTTCCGG +
Preference number: 2 (lower is better)
Translates to: SLGPPLSAREKSAVQGRECHPTT*AQGQFR
Trigger: CCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACA...TTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
3UTR-3UTR CCA 90 bp AAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCACCCCTCCGGACAAGGTaGACAGCTTTGGTGATAGAC +
Preference number: 2 (lower is better)
Translates to: KGMCLSSHHLRARPVPGSPLRTR*TALVID
Trigger: GTCTATCACCAAAGCTGTCCACCTTGTCCGGAGGGG...TGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR CAA 90 bp AAAGAGTGCAGTTCAAGGAAGGGAATGTGTCTGTCATCCCACCACTaGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCTTCACCAG +
Preference number: 2 (lower is better)
Translates to: KECSSRKGMCLSSHH*RARPVPGSAGFLHQ
Trigger: CTGGTGAAGGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCCTTGAACTGCACTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR-3UTR TCA 90 bp CAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACCTCGAGATGCTTACTCTCGGGCCACCTCTaGGTGCAAGGGAAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: QASFTSTGSSLATTSRCLLSGHL*VQGKRV
Trigger: CACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAG...TAAGCATCTCGAGGTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR-3UTR GCA 90 bp CAGCCGCCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGTGCAAGGGAAAAGAGTaGAGTTCAAGGAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: QPPGVSTLIPLRTRWTALCKGKE*SSRKGM
Trigger: CATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCA...CAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGGCGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR-3UTR GCA 90 bp CCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCATGCAAGGGAAAAGAGTaGAGTTCAAGGAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: PPLARKASSGISRLPSPACKGKE*SSRKGM
Trigger: CATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCA...TGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR-3UTR GCA 90 bp CAGCCGCCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGATTGGAATCTCTCCATaGCTTCTGCAGCATGGAAAC +
Preference number: 2 (lower is better)
Translates to: QPPGVSTLIPLRTRWTALIGISP*LLQHGN
Trigger: GTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAAT...CAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGGCGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR CAA 90 bp AGATGGAGACGTTCAGCTGCAAAGGCTACGGAGGAACCCCCGCAATaGGAATCTCTCCATGCCTTCTGCAGCATGGAAACATACTCCGGG +
Preference number: 2 (lower is better)
Translates to: RWRRSAAKATEEPPQ*ESLHAFCSMETYSG
Trigger: CCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACGTCTCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR-3UTR GCA 90 bp AAAGATCCAACTGCTGCTGAGGTAGAAATCGAACGTTGGCGCCCCCTAGTCCTCCGGGCCACCTCTGAGTaGAAGGGAAAAGAGTGCAGT +
Preference number: 2 (lower is better)
Translates to: KDPTAAEVEIERWRPLVLRATSE*KGKECS
Trigger: ACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCG...GAGGACTAGGGGGCGCCAACGTTCGATTTCTACCTCAGCAGCAGTTGGATCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR-3UTR TCA 90 bp CAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACCTCGAGATGCTTAGCAGCCTTACGGCTCTaGCTAATAGCTCATGCCTCA +
Preference number: 2 (lower is better)
Translates to: QASFTSTGSSLATTSRCLAALRL*LIAHAS
Trigger: TGAGGCATGAGCTATTAGTCAGAGCCGTAAGGCTGC...TAAGCATCTCGAGGTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR-3UTR TCA 90 bp AAAGATCCAACTGCTGCTGAGGTAGAAATCGAACGTTGGCGCCCCCTAGTCCTCAGATCCAACTGCTGCTaGGGTAGAAATCGAACGTTG +
Preference number: 2 (lower is better)
Translates to: KDPTAAEVEIERWRPLVLRSNCC*GRNRTL
Trigger: CAACGTTCGATTTCTACCTCAGCAGCAGTTGGATCT...GAGGACTAGGGGGCGCCAACGTTCGATTTCTACCTCAGCAGCAGTTGGATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR-3UTR GCA 90 bp AAAGATCCAACTGCTGCTGAGGTAGAAATCGAACGTTGGCGCCCCCTAGTCCTCTGCAAGGGAAAAGAGTaGAGTTCAAGGAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: KDPTAAEVEIERWRPLVLCKGKE*SSRKGM
Trigger: CATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCA...GAGGACTAGGGGGCGCCAACGTTCGATTTCTACCTCAGCAGCAGTTGGATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR-3UTR CCA 90 bp CGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAATGAGGATACGGTTTTaGTCTTCTCATTCCTTTATG +
Preference number: 2 (lower is better)
Translates to: RGSLGPPLSAREKSAVQGMRIRF*SSHSFM
Trigger: CATAAAGGAATGAGAAGACCAAAACCGTATCCTCAT...TCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR CAA 90 bp GAAAAGGAGCAGGTTTATACCTGTCCTAATTGCCAGAGGCATCGTTaGCCAGGGCTGTACAACAATGGGGAAAGTGGATTGAAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: EKEQVYTCPNCQRHR*PGLYNNGESGLKGW
Trigger: CCACCCTTTCAATCCACTTTCCCCATTGTTGTACAGCCCTGGCAAACGATGCCTCTGGCAATTAGGACAGGTATAAACCTGCTCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCCACCCCACCCCAGATaGAAGTGGAAAGACCATGGC +
Preference number: 2 (lower is better)
Translates to: MFGQHEQLLPFYELANEVPPHPR*KWKDHG
Trigger: GCCATGGTCTTTCCACTTTCATCTGGGGTGGGGTGG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR CAA 90 bp CTTATCTTTGGTGTTCTAAACAGAGGATTCACTACAGGGAGTGGGTaGGGGTGGTATTTGAGGTGTACACAGTGTTACACACCGCGTTCT +
Preference number: 2 (lower is better)
Translates to: LIFGVLNRGFTTGSG*GWYLRCTQCYTPRS
Trigger: AGAACGCGGTGTGTAACACTGTGTACACCTCAAATACCACCCCAACCCACTCCCTGTAGTGAATCCTCTGTTTAGAACACCAAAGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR CAA 90 bp GAGATGGAAATCACTCGGTGCACCATGTTTGGCCAACATGAGCAATaGCTTCCATTTTATGAGCTGGCCAATGAGGTTTCTAAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: EMEITRCTMFGQHEQ*LPFYELANEVSKRP
Trigger: GGGCCTTTTAGAAACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACATGGTGCACCGAGTGATTTCCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGATTGTCCTGTGGATATaGCATCAGGATGGGGCATAT +
Preference number: 2 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQIVLWI*HQDGAY
Trigger: ATATGCCCCATCCTGATGTCATATCCACAGGACAAT...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR-3UTR TCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATATTAGCAGGTTCAGCATaGTACCACCTGGATCTCCAA +
Preference number: 2 (lower is better)
Translates to: EEMFTICSQGLVPAYHWILAGSA*YHLDLQ
Trigger: TTGGAGATCCAGGTGGTATCATGCTGAACCTGCTAA...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCCAGGCAAGGCAACATTaGCCTAAGAAAACAGGATGC +
Preference number: 2 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCQARQH*PKKTGC
Trigger: GCATCCTGTTTTCTTAGGTCAATGTTGCCTTGCCTG...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp GTACTGCACACACCCCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGTCCAGAAGCACTAGCTaGATCACTAAGCAACATCTG +
Preference number: 2 (lower is better)
Translates to: VLHTPHYQIKGISSLRNQSRSTS*ITKQHL
Trigger: CAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGA...CTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGGGGTGTGTGCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
3UTR-3UTR TCA 90 bp GTACTGCACACACCCCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGAGTGACCAATTGAAGTaGACTTTAAGCATCTGGTCC +
Preference number: 2 (lower is better)
Translates to: VLHTPHYQIKGISSLRNQSDQLK*TLSIWS
Trigger: GGACCAGATGCTTAAAGTTCACTTCAATTGGTCACT...CTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGGGGTGTGTGCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
3UTR-3UTR TCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTGAGGTATGTGGCCTTTaGAACTACCTCCCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: MFGQHEQLLPFYELANEVEVCGL*NYLPEA
Trigger: TGCTTCAGGGAGGTAGTTTCAAAGGCCACATACCTC...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAAATAAACAGAATCGCTaGAGGGTGGGGCCATGCTGG +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQNKQNR*RVGPCW
Trigger: CCAGCATGGCCCCACCCTTCAGCGATTCTGTTTATT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCAACAAGGGCCATTCTTaGAGTTCTGAGGAGACTTCA +
Preference number: 2 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCNKGHS*SSEETS
Trigger: TGAAGTCTCCTCAGAACTTCAAGAATGGCCCTTGTT...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAGCCAGAGGCATCGTTTaGCAGGGCTGTACAACAATG +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQARGIV*QGCTTM
Trigger: CATTGTTGTACAGCCCTGGCAAACGATGCCTCTGGC...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCGTTCCAGCATACCACTaGATAGGACACAGGCATATA +
Preference number: 2 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCVPAYH*IGHRHI
Trigger: TATATGCCTGTGTCCTATCCAGTGGTATGCTGGAAC...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAATCCAGATTGCCTCATaGGAAAGCCATCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQIQIAS*ESHLGG
Trigger: CCCTCCCAGATGGCTTTCCCATGAGGCAATCTGGAT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTaGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAGGACACAG +
Preference number: 2 (lower is better)
Translates to: YLTSLNTEFRRDVHY*LTRAGSSIPLDRTQ
Trigger: CTGTGTCCTATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACGCCAGTGTTTTGAAATaGTCTAAAAGACACCTGATA +
Preference number: 2 (lower is better)
Translates to: SYKGAIWGSSETTSWDADASVLK*SKRHLI
Trigger: TATCAGGTGTCTTTTAGATCATTTCAAAACACTGGC...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
3UTR-3UTR TCA 90 bp TCTTTTCCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTGGATGGAGGATCTGATGAACACCACATaGCACCAAATCTCTGCTATT +
Preference number: 2 (lower is better)
Translates to: SFPPEALAASLSNIWMEDLMNTT*HQISAI
Trigger: AATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAG...ATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
3UTR-3UTR TCA 90 bp GTCCCCACAAGACTCATATCCTCCACTTTTACACAACTTGAACTTGGCAGAAGTTGTGCTCAGTCCAACTaGTTTGTCAGTATCATGAGG +
Preference number: 2 (lower is better)
Translates to: VPTRLISSTFTQLELGRSCAQSN*FVSIMR
Trigger: CCTCATGATACTGACAAATCAGTTGGACTGAGCACA...ACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAGTCTTGTGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR-3UTR TCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCCACCTGGATCTCCAATaGCTATTTACATACAGAAGG +
Preference number: 2 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCHLDLQ*LFTYRR
Trigger: CCTTCTGTATGTAAATAGTCATTGGAGATCCAGGTG...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGTCACCCGCCCACTCTTaGTTATCAGATCAACAAACT +
Preference number: 2 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMSPAHS*LSDQQT
Trigger: AGTTTGTTGATCTGATAAGCAAGAGTGGGCGGGTGA...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR GCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCCAGAATAAACTCTGCTaGTTTGTACCCCAGGTTCAA +
Preference number: 2 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCQNKLC*FVPQVQ
Trigger: TTGAACCTGGGGTACAAAGCAGCAGAGTTTATTCTG...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGGCAAACACAAACCCCTaGAACAGGGTGGTCCTTCAC +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKANTNP*NRVVLH
Trigger: GTGAAGGACCACCCTGTTGCAGGGGTTTGTGTTTGC...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAACCTGTGATGCAAATGTaGACTCTGCCTCATCCTTTG +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQPVMQM*TLPHPL
Trigger: CAAAGGATGAGGCAGAGTTCACATTTGCATCACAGG...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATCCCTCAAAGTGCTGTTaGAGGAAGGATATGAGGCTG +
Preference number: 2 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYPSKCC*RKDMRL
Trigger: CAGCCTCATATCCTTCCTTCAACAGCACTTTGAGGG...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCCTGTTTACACACTGCTaGGCCCTTTTCTTTAGATGT +
Preference number: 2 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFLFTHC*ALFFRC
Trigger: ACATCTAAAGAAAAGGGCTCAGCAGTGTGTAAACAG...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCAGCATTGGGCAGTATaGGGATACTTCACCACAGAG +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKQHWAV*GYFTTE
Trigger: CTCTGTGGTGAAGTATCCTCATACTGCCCAATGCTG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CCA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCTCAGGATGGGGCATATaGCATGAATACCTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSSGWGI*HEYLRR
Trigger: TCTTCTGAGGTATTCATGCCATATGCCCCATCCTGA...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR-3UTR CCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAGGTGCTCCAGGAATATaGGGCAAGAGACGTAGAGCT +
Preference number: 2 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTGAPGI*GKRRRA
Trigger: AGCTCTACGTCTCTTGCCCCATATTCCTGGAGCACC...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGAGGGTGGGGCCATGCTaGGGAGGTAAATGTTTAACT +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKRVGPC*GGKCLT
Trigger: AGTTAAACATTTACCTCCCCAGCATGGCCCCACCCT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 90 bp TCCTATAAAGGGCAAATCTGGAACAGGGTCTGTAAGATAGCCAGATaGATCCTTGAAGATCAACTCAATCCACTTGTGGCTTCTTTGAGA +
Preference number: 2 (lower is better)
Translates to: SYKGQIWNRVCKIAR*ILEDQLNPLVASLR
Trigger: TCTCAAAGAAGCCACAAGTGGATTGAGTTGATCTTCAAGGATCAATCTGGCTATCTTACAGACCCTGTTCCAGATTTGCCCTTTATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATCCATTCTTGAAGTTCTaGGGAGACTTCAGCATTGGG +
Preference number: 2 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYPFLKF*GDFSIG
Trigger: CCCAATGCTGAAGTCTCCTCAGAACTTCAAGAATGG...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCAGAATAAGTGGTCACTaGAGTGTCTTCTCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: MKVERPWQYRISGHCSVFRISGH*SVFSLQ
Trigger: TTGAAGGGAGAAGACACTGCAGTGACCACTTATTCT...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403681.7
ENST00000539662.1
3UTR-3UTR CCA 90 bp GTACTGCACACACCCCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGTCACTAAGCAACATCTaGATGGAGGATTTTATACAT +
Preference number: 2 (lower is better)
Translates to: VLHTPHYQIKGISSLRNQSLSNI*MEDFIH
Trigger: ATGTATAAAATCCTCCATCCAGATGTTGCTTAGTGA...CTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGGGGTGTGTGCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393578.7
3UTR-3UTR CCA 90 bp ACTCTTGTGAGGATGTCTCTTCAGTTTCCTCCTGAGCAGGCTTCTTCTGAACAAAAAGTGGAAAGACCATaGCAATACAGAATAAGTGGT +
Preference number: 2 (lower is better)
Translates to: TLVRMSLQFPPEQASSEQKVERP*QYRISG
Trigger: ACCACTTATTCTGTATTGCCATGGTCTTTCCACTTT...TTGTTCAGAAGAAGCCTGCTCAGGAGGAAACTGAAGAGACATCCTCACAAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR-3UTR CCA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCGATATGACATCAGGATaGGGCATATGGCATGAATAC +
Preference number: 2 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSDMTSG*GIWHEY
Trigger: GTATTCATGCCATATGCCCCATCCTGATGTCATATC...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR CAA 90 bp TCCTCCACTTTTACACAACTTGAACTTGGCAGAAGTGTTCTTCAGTaGATTCATGTGTGCTCAGTCCAACTGATTTGTCAGTATCATGAG +
Preference number: 2 (lower is better)
Translates to: SSTFTQLELGRSVLQ*IHVCSVQLICQYHE
Trigger: CTCATGATACTGACAAATCAGTTGGACTGAGCACACATGAATCAACTGAAGAACACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR CAA 90 bp ACACAAGTGCGTATGCAGGTGCTGAGATTTATCATAATTCTGAATTaGTCTCCTCAGAATAAACTCTGCTGCTTTGTACCCCAGGTTCAA +
Preference number: 2 (lower is better)
Translates to: TQVRMQVLRFIIILN*SPQNKLCCFVPQVQ
Trigger: TTGAACCTGGGGTACAAAGCAGCAGAGTTTATTCTGAGGAGACAAATTCAGAATTATGATAAATCTCAGCACCTGCATACGCACTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 90 bp AACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCATGTACTaGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATC +
Preference number: 2 (lower is better)
Translates to: NRVVLHFSFLSRCMY*YTQTQVRMQVLRFI
Trigger: GATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATAGATCCAACTGCTGCTaGGGTAGAAATCGAACGTTG +
Preference number: 2 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHRSNCC*GRNRTL
Trigger: CAACGTTCGATTTCTACCTCAGCAGCAGTTGGATCT...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTACCGACGTCACAAGTGTaGCACGTTTCTTGTTTGCAT +
Preference number: 2 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVPTSQV*HVSCLH
Trigger: ATGCAAACAAGAAACGTGTCACACTTGTGACGTCGG...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATGGTTGGGGTGGTATTTaGGGTGTACACAGTGTTACA +
Preference number: 2 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDGWGGI*GVHSVT
Trigger: TGTAACACTGTGTACACCTCAAATACCACCCCAACC...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATTTGAAACTACCTCCCTaGAGCAGCTGGAAGAGAGAT +
Preference number: 2 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDLKLPP*SSWKRD
Trigger: ATCTCTCTTCCAGCTGCTTCAGGGAGGTAGTTTCAA...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGATCCCCTTGATAACCTaGGGCATTCCACTCATTCAT +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKIPLIT*GIPLIH
Trigger: ATGAATGAGTGGAATGCCTCAGGTTATCAAGGGGAT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAATAGTGAGGACAAGGTaGTCCAGGAATATGGGGCAA +
Preference number: 2 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTIVRTR*SRNMGQ
Trigger: TTGCCCCATATTCCTGGAGCACCTTGTCCTCACTAT...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCCTCAGAATAAACTCTaGTGCTTTGTACCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKPQNKL*CFVPQV
Trigger: AACCTGGGGTACAAAGCAGCAGAGTTTATTCTGAGG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CCA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAACGAAGAAAAGCACCTTaGTCAACCATCTTATGTCAA +
Preference number: 2 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQRRKAP*STILCQ
Trigger: TTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR CCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATTCTCAGAGAGGTATGTaGCCTTTGAAACTACCTCCC +
Preference number: 2 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDSQRGM*PLKLPP
Trigger: GGGAGGTAGTTTCAAAGGCCACATACCTCTCTGAGA...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGAGGGCTGTACAACAATaGGGAAAGTGGATTGAAAGG +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKRAVQQ*GKWIER
Trigger: CCTTTCAATCCACTTTCCCCATTGTTGTACAGCCCT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 90 bp TTGGGAGGTTTTCATGGTACGATTGCAGACTATATATTCCTAACTTaGAAGGCTACAACACATTTTCAGGAATACTGCAGGACGATAACC +
Preference number: 2 (lower is better)
Translates to: LGGFHGTIADYIFLT*KATTHFQEYCRTIT
Trigger: GGTTATCGTCCTGCAGTATTCCTGAAAATGTGTTGTAGCCTTCAAAGTTAGGAATATATAGTCTGCAATCGTACCATGAAAACCTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 90 bp CCATGGTGTAAATACTCCCACCATAGTGGATTTCAAGCTACCTACTaGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTG +
Preference number: 2 (lower is better)
Translates to: PWCKYSHHSGFQATY*TSLNTEFRRDVHYL
Trigger: CAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTAGGTAGCTTGAAATCCACTATGGTGGGAGTATTTACACCATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp TTCAGTTCTCCCTTCTCGATCCTCAAATCATCACTTAAATTTCTAGATTTCTACACTAAACTAGGTATGTaGCGAGCTCCTTTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: FSSPFSILKSSLKFLDFYTKLGM*RAPFLG
Trigger: GCCTAGGAAAGGAGCTCGTCACATACCTAGTTTAGT...GTAGAAATCTAGAAATTTAAGTGATGATTTGAGGATCGAGAAGGGAGAACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393578.7
3UTR-3UTR TCA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATCTAAACCTGGGACTGTaGAGGGATTACAAAGAAGGT +
Preference number: 2 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHLNLGL*RDYKEG
Trigger: ACCTTCTTTGTAATCCCTTCACAGTCCCAGGTTTAG...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTGTCTTTCATGGAAACTaGTACACAATGAAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: MFGQHEQLLPFYELANEVVFHGN*YTMKRE
Trigger: CTCTCTTTTCATTGTGTATCAGTTTCCATGAAAGAC...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAATAGTTCACAGCCTGTaGTGCAAATGTGAACTCTGC +
Preference number: 2 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTIVHSL*CKCELC
Trigger: GCAGAGTTCACATTTGCATCACAGGCTGTGAACTAT...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATCACTTGTGGCTTCTTTaGGATTCTGAATTCTCTTGG +
Preference number: 2 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYHLWLL*DSEFSW
Trigger: CCAAGAGAATTCAGAATCTCAAAGAAGCCACAAGTG...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGTTGAGAACGAGATGCTaGCTGCAATTCATCAACTTG +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKLRTRC*LQFINL
Trigger: CAAGTTGATGAATTGCAGTCAGCATCTCGTTCTCAA...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGAATCATTATGCTCCTTaGGTGAGTAGACGAGTGAGT +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKNHYAP*VSRRVS
Trigger: ACTCACTCGTCTACTCACTCAAGGAGCATAATGATT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAGAAGATGATTCTGAATaGTTTAGCCCTAACAGTAGG +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQEDDSE*FSPNSR
Trigger: CCTACTGTTAGGGCTAAAGCATTCAGAATCATCTTC...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAATATACAACAAAACCGTaGAACTTAGGGCAACCTTTG +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQYTTKP*NLGQPL
Trigger: CAAAGGTTGCCCTAAGTTGCACGGTTTTGTTGTATA...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCATAGGTGTTGTATTTaGGGCCAGGGAACAGAATAT +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKHRCCI*GQGTEY
Trigger: ATATTCTGTTCCCTGGCCGCAAATACAACACCTATG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CCA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAAAAAGTGGAAAGACCATaGCAATACAGAATAAGTGGT +
Preference number: 2 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQKVERP*QYRISG
Trigger: ACCACTTATTCTGTATTGCCATGGTCTTTCCACTTT...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR CCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCATCCCATTTCCTAGATaGATAAATAGAGCAAAGAGA +
Preference number: 2 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFIPFPR*INRAKR
Trigger: TCTCTTTGCTCTATTTATCCATCTAGGAAATGGGAT...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 90 bp AAAACCGTGCAACTTAGGGCAACCTTTGATATGATTCTTCATGTTTaGCCAGTTGGTACTAAACATTTACTGGCCCACAAGATGTTTTAC +
Preference number: 2 (lower is better)
Translates to: KTVQLRATFDMILHV*PVGTKHLLAHKMFY
Trigger: GTAAAACATCTTGTGGGCCAGTAAATGTTTAGTACCAACTGGCAAAACATGAAGAATCATATCAAAGGTTGCCCTAAGTTGCACGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCTGATGAACACCACATaGCACCAAATCTCTGCTATT +
Preference number: 2 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENLMNTT*HQISAI
Trigger: AATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAG...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
3UTR-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATCAAGTTCATTCCTTTTaGAGTCTGGAGGTAGGTCTT +
Preference number: 2 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDQVHSF*SLEVGL
Trigger: AAGACCTACCTCCAGACTTCAAAAGGAATGAACTTG...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp AATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGTCCTCCTTTTGCAGATaGGGAAACTGGACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: NFNWQDWLMEFYRSSENQSSFCR*GNWTFK
Trigger: TTTAAAGGTCCAGTTTCCTCATCTGCAAAAGGAGGA...CTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537275.5
3UTR-3UTR TCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAACTAAGCACAAGGGCTaGATCAATATTAACAAACCA +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQTKHKG*ININKP
Trigger: TGGTTTGTTAATATTGATTCAGCCCTTGTGCTTAGT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAATTCAATGAAAACACTTaGCGTCAAAGAGGAAGTACT +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQFNENT*RQRGST
Trigger: AGTACTTCCTCTTTGACGTCAAGTGTTTTCATTGAA...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTACAGTAATTAAAAGTTaGATTGTTAAGCTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: MFGQHEQLLPFYELANEVTVIKS*IVKLCP
Trigger: GGGACACAGCTTAACAATGCAACTTTTAATTACTGT...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR GCA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAATTGACTAGGGTTAGCTaGAGTTTGAACTATTTCAAA +
Preference number: 2 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQLTRVS*SLNYFK
Trigger: TTTGAAATAGTTCAAACTGCAGCTAACCCTAGTCAA...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR GCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAACATTTTCAGGAATACTaGAGGACGATAACCAAAAGT +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQHFQEY*RTITKS
Trigger: ACTTTTGGTTATCGTCCTGCAGTATTCCTGAAAATG...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CCA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATGCAATACAGAATAAGTaGTCACTGCAGTGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHAIQNK*SLQCLL
Trigger: GAGAAGACACTGCAGTGACCACTTATTCTGTATTGC...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR CCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAATTTGGGAGGTTTTCATaGTACGATTGCAGACTATAT +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQFGRFS*YDCRLY
Trigger: ATATAGTCTGCAATCGTACCATGAAAACCTCCCAAA...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAATTGCAATTCTCTCATTaGGAAATTGAAAAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQLQFSH*EIEKEQ
Trigger: CTGCTCCTTTTCAATTTCCCAATGAGAGAATTGCAA...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR TCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATTCTGTATGTACATCTTaGGGCAAACAGCAGAAATAC +
Preference number: 2 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENSVCTS*GKQQKY
Trigger: GTATTTCTGCTGTTTGCCTCAAGATGTACATACAGA...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
3UTR-3UTR TCA 90 bp AATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGTCTGTATGTACATCTTaGGGCAAACAGCAGAAATAC +
Preference number: 2 (lower is better)
Translates to: NFNWQDWLMEFYRSSENQSVCTS*GKQQKY
Trigger: GTATTTCTGCTGTTTGCCTCAAGATGTACATACAGA...CTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
3UTR-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATCTTAAAGAATTCATTTaGGGTACAGACTTGGAGGGT +
Preference number: 2 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDLKEFI*GTDLEG
Trigger: ACCCTCCAAGTCTGTACCTCAAATGAATTCTTTAAG...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATAATAATCTCCACCTATaGTGTATTTGTTCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYNNLHL*CICSCL
Trigger: GAGGCAAGAACAAATACATCATAGGTGGAGATTATT...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR GCA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATTCTAGTTTCCTTAAATaGTCTGAGGCTGACAAGTGT +
Preference number: 2 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHSSFLK*SEADKC
Trigger: ACACTTGTCAGCCTCAGAGCATTTAAGGAAACTAGA...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR GCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAGTCTTCATCTCTAGTTaGATATTAAACTCACTTAGG +
Preference number: 2 (lower is better)
Translates to: SSITENTATEVMLVSGIQVFISS*ILNSLR
Trigger: CCTAAGTGAGTTTAATATGCAACTAGAGATGAAGAC...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGTTAAGGGTTAAACCTTaGTTTCTACTTTGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKLRVKP*FLLCSL
Trigger: GAGAGAGCAAAGTAGAAACCAAGGTTTAACCCTTAA...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 90 bp GAGCCACTGTTTATTTGCTTATTTAACGCACAGTTAACAGTAATGTaGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATTCACAACAG +
Preference number: 2 (lower is better)
Translates to: EPLFICLFNAQLTVM*SFNSLHSSFGDSQQ
Trigger: CTGTTGTGAATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGCGTTAAATAAGCAAATAAACAGTGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATCACCTCATAATTAGGTaGGTTCATCATGCATTATTC +
Preference number: 2 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDHLIIR*VHHALF
Trigger: GAATAATGCATGATGAACTCACCTAATTATGAGGTG...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR GCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGAGGTTCAATTCTTACTaGAGGAACACTGCATTTAAA +
Preference number: 2 (lower is better)
Translates to: DSGGNARRELCFSKGDNKRFNSY*RNTAFK
Trigger: TTTAAATGCAGTGTTCCTGCAGTAAGAATTGAACCT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 90 bp TTAAGGATTTTCTTAGAAAGACCAGGTTTTAAAGCCAGTTGCTATTaGTTCCACATTAATTTGGGTCAGCAAGTTTGGAGAGTAAGAAGA +
Preference number: 2 (lower is better)
Translates to: LRIFLERPGFKASCY*FHINLGQQVWRVRR
Trigger: TCTTCTTACTCTCCAAACTTGCTGACCCAAATTAATGTGGAACAAATAGCAACTGGCTTTAAAACCTGGTCTTTCTAAGAAAATCCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 72 bp ACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTaGGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: TPGPTGALSGHL*VQGKRVQFKEG
Trigger: CCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR-3UTR CAA 90 bp GAACAACTTGTTGTGGCGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAACTGTCATCCCACCACTaGCGCGCAAGGCCAGTTCCG +
Preference number: 3 (lower is better)
Translates to: EQLVVAGLSRATSECKGKLSSHH*RARPVP
Trigger: CGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAG...TTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGCCACAACAAGTTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR TCA 72 bp CTGGGAGGTAAAACTCCACAGAGCCATGCCAGCGACTaGCCGCCCAGGGACAGGAGATGGAGACGTTCAGCT +
Preference number: 3 (lower is better)
Translates to: LGGKTPQSHASD*PPRDRRWRRSA
Trigger: AGCTGAACGTCTCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCATGGCTCTGTGGAGTTTTACCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR GCA 72 bp CGGGACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTaGAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAATG +
Preference number: 3 (lower is better)
Translates to: RDLPGLSRATSE*KGKECSSRKGM
Trigger: CATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR GCA 72 bp CTGACCGCCCAGGGACAGGAGATGGAGACGTTCAGCTaGAAAGGCTACGGAGGAACCCCCGCAATTGGAATC +
Preference number: 3 (lower is better)
Translates to: LTAQGQEMETFS*KGYGGTPAIGI
Trigger: GATTCCAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACGTCTCCATCTCCTGTCCCTGGGCGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR-3UTR CAA 90 bp AATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCTGAACAACTTGTaGTGGCGGGGCTCTCTCGGG +
Preference number: 3 (lower is better)
Translates to: NVSVIPPLARKASSGISRLLNNL*WRGSLG
Trigger: CCCGAGAGAGCCCCGCCACAACAAGTTGTTCAGAAG...CCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR-3UTR CAA 90 bp CTACGGAGGAACCCCCGCAATTGGAATCTCTCCATGCCTTCTGCAGCATGGAAACTGTCATCCCACCACTaGCGCGCAAGGCCAGTTCCG +
Preference number: 3 (lower is better)
Translates to: LRRNPRNWNLSMPSAAWKLSSHH*RARPVP
Trigger: CGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAG...TTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR-3UTR CAA 90 bp GAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGGTAGAAATCGAACGTaGGCGCCCCCTAGTCCTCTT +
Preference number: 3 (lower is better)
Translates to: ECVCHPTTCAQGQFRDQQGRNRT*APPSPL
Trigger: AAGAGGACTAGGGGGCGCCAACGTTCGATTTCTACC...CTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR GCA 72 bp GAGGAACCCCCGCAATTGGAATCTCTCCATGCCTTCTaGAGCATGGAAACATACTCCGGGACCTACCGGGGC +
Preference number: 3 (lower is better)
Translates to: EEPPQLESLHAF*SMETYSGTYRG
Trigger: GCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR TCA 72 bp CGTTGGCGCCCCCTAGTCCTCTTCGGCAGACTCTTGTaGGGATGTCTCTTCAGTTTCCTCCTGAGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: RWRPLVLFGRLL*GCLFSFLLSRL
Trigger: AAGCCTGCTCAGGAGGAAACTGAAGAGACATCCTCACAAGAGTCTGCCGAAGAGGACTAGGGGGCGCCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR GCA 72 bp CTTGTTGTGGCGGGGCTCTCTCGGGCCACCTCTGAGTaGAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAATG +
Preference number: 3 (lower is better)
Translates to: LVVAGLSRATSE*KGKECSSRKGM
Trigger: CATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGCCACAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR-3UTR CAA 90 bp AATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGACAAGGTGGACAGCTTaGGTGATAGACAACTGGGAG +
Preference number: 3 (lower is better)
Translates to: NVSVIPPLARKASSGISRTRWTA*VIDNWE
Trigger: CTCCCAGTTGTCTATCACCAAAGCTGTCCACCTTGT...CCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR-3UTR CAA 90 bp AAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCACTTCTTCTGAACAACTaGTTGTGGCGGGGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: KGMCLSSHHLRARPVPGSLLLNN*LWRGSL
Trigger: GAGAGAGCCCCGCCACAACAAGTTGTTCAGAAGAAG...TGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR GCA 72 bp GGCTACGGAGGAACCCCCGCAATTGGAATCTCTCCATaGCTTCTGCAGCATGGAAACATACTCCGGGACCTA +
Preference number: 3 (lower is better)
Translates to: GYGGTPAIGISP*LLQHGNILRDL
Trigger: TAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR CCA 72 bp CTCCGGACAAGGTGGACAGCTTTGGTGATAGACAACTaGGAGGTAAAACTCCACAGAGCCATGCCAGCGACT +
Preference number: 3 (lower is better)
Translates to: LRTRWTALVIDN*EVKLHRAMPAT
Trigger: AGTCGCTGGCATGGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTTGTCCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR CCA 72 bp CCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTaGACAGCTTTGGTGATAGACAACTGGGAGGTAAAA +
Preference number: 3 (lower is better)
Translates to: PGVSTLIPLRTR*TALVIDNWEVK
Trigger: TTTTACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
3UTR TCA 72 bp GCAGTGTCTTCTCCCTTCAAAAGATCCAACTGCTGCTaGGGTAGAAATCGAACGTTGGCGCCCCCTAGTCCT +
Preference number: 3 (lower is better)
Translates to: AVSSPFKRSNCC*GRNRTLAPPSP
Trigger: AGGACTAGGGGGCGCCAACGTTCGATTTCTACCTCAGCAGCAGTTGGATCTTTTGAAGGGAGAAGACACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539662.1
3UTR TCA 72 bp TCCAAAGTTCTTCTCCTGCAGGCAGCCTTACGGCTCTaGCTAATAGCTCATGCCTCAACTCTGTGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: SKVLLLQAALRL*LIAHASTLCPH
Trigger: GTGGGGACACAGAGTTGAGGCATGAGCTATTAGTCAGAGCCGTAAGGCTGCCTGCAGGAGAAGAACTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR-3UTR CAA 90 bp GAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGCCACTTTTACACAACTaGAACTTGGCAGAAGTGTTC +
Preference number: 3 (lower is better)
Translates to: ECVCHPTTCAQGQFRDQQPLLHN*NLAEVF
Trigger: GAACACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGG...CTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR-3UTR CAA 90 bp CAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCAGAAGTGTTCTTCAGTaGATTCATGTGTGCTCAGTC +
Preference number: 3 (lower is better)
Translates to: QFRDQQASFTSTGSSLATRSVLQ*IHVCSV
Trigger: GACTGAGCACACATGAATCAACTGAAGAACACTTCT...GGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR TCA 72 bp GAGGATTCACTACAGGGAGTGGGTTGGGGTGGTATTTaGGGTGTACACAGTGTTACACACCGCGTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: EDSLQGVGWGGI*GVHSVTHRVLP
Trigger: AGGAAGAACGCGGTGTGTAACACTGTGTACACCTCAAATACCACCCCAACCCACTCCCTGTAGTGAATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR CAA 90 bp GGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGCATGAGGATACGGTTTaGGTCTTCTCATTCCTTTAT +
Preference number: 3 (lower is better)
Translates to: GLSRATSECKGKECSSRKHEDTV*VFSFLY
Trigger: ATAAAGGAATGAGAAGACCAAAACCGTATCCTCATG...CTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR CCA 72 bp TATGGGACACACTTGATGTTTGCAGCTGATGACACCTaGTGGATTTCGCAAACACAAACCCCTGCAACAGGG +
Preference number: 3 (lower is better)
Translates to: YGTHLMFAADDT*WISQTQTPATG
Trigger: CCCTGTTGCAGGGGTTTGTGTTTGCGAAATCCACCAGGTGTCATCAGCTGCAAACATCAAGTGTGTCCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 72 bp GGTGTACACAGTGTTACACACCGCGTTCTTCCTATATaGATGCCCGACGTCACAAGTGTGACACGTTTCTTG +
Preference number: 3 (lower is better)
Translates to: GVHSVTHRVLPI*MPDVTSVTRFL
Trigger: CAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGAACGCGGTGTGTAACACTGTGTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR TCA 72 bp AATTCTCTCCATAGCTCCTTTGGTGATTCACAACAGTaGGCGATCTGCCAGTCTCAGAGAGGTATGTGGCCT +
Preference number: 3 (lower is better)
Translates to: NSLHSSFGDSQQ*AICQSQRGMWP
Trigger: AGGCCACATACCTCTCTGAGACTGGCAGATCGCTCACTGTTGTGAATCACCAAAGGAGCTATGGAGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR TCA 72 bp GTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCTaGGGAGACTTCAGCATTGGGCAGTATGAGGATACT +
Preference number: 3 (lower is better)
Translates to: VPQVQQGPFLKF*GDFSIGQYEDT
Trigger: AGTATCCTCATACTGCCCAATGCTGAAGTCTCCTCAGAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp GCTATCCTGGACTCCTCCAATGACAATTCAGTGACTCCTTTTGGTACTGTTTCCTCTTGGAGCTGGTTCTaGGTAGTAGATTGTCCTGTG +
Preference number: 3 (lower is better)
Translates to: AILDSSNDNSVTPFGTVSSWSWF*VVDCPV
Trigger: CACAGGACAATCTACTACCAAGAACCAGCTCCAAGA...GGAAACAGTACCAAAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGGATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAACTTACTGAGATTTCTTaGCCCGGGTGCACACCACCC +
Preference number: 3 (lower is better)
Translates to: SSITENTATEVMLVSGIQLTEIS*PGCTPP
Trigger: GGGTGGTGTGCACCCGGGCAAAGAAATCTCAGTAAG...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 72 bp TGTGACACGTTTCTTGTTTGCATGCAGTGCAGTGATTaGCTAAACCCAATTCGGTTTTTCTCACCCGCCCAC +
Preference number: 3 (lower is better)
Translates to: CDTFLVCMQCSD*LNPIRFFSPAH
Trigger: GTGGGCGGGTGAGAAAAACCGAATTGGGTTTAGTCAATCACTGCACTGCATGCAAACAAGAAACGTGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR CAA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAAGGGTTGGGGTGGTATTaGAGGTGTACACAGTGTTAC +
Preference number: 3 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQGLGWY*RCTQCY
Trigger: GTAACACTGTGTACACCTCAAATACCACCCCAACCC...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR GCA 72 bp TCACTCGGTGCACCATGTTTGGCCAACATGAGCAATTaGTTCCATTTTATGAGCTGGCCAATGAGGTTTCTA +
Preference number: 3 (lower is better)
Translates to: SLGAPCLANMSN*FHFMSWPMRFL
Trigger: TAGAAACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACATGGTGCACCGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR GCA 72 bp AAATCCCGTGATAATCAAGGCTTACTGAGATTTCTTTaGCCGGGTGCACACCACCCACAGAAGATGTTACTT +
Preference number: 3 (lower is better)
Translates to: KSRDNQGLLRFL*PGAHHPQKMLL
Trigger: AAGTAACATCTTCTGTGGGTGGTGTGCACCCGGGCAAAGAAATCTCAGTAAGCCTTGATTATCACGGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CCA 72 bp TGGTGGATTTCGCAAACACAAACCCCTGCAACAGGGTaGTCCTTCACTTTTCATTTCTCTCTAGATGCATGT +
Preference number: 3 (lower is better)
Translates to: WWISQTQTPATG*SFTFHFSLDAC
Trigger: ACATGCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTTTGCGAAATCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAACTCTGCCTCATCCTTaGACTCAAATGCACAGAATT +
Preference number: 3 (lower is better)
Translates to: EEMFTICSQGLVPAYHWITLPHP*TQMHRI
Trigger: AATTCTGTGCATTTGAGTCAAAGGATGAGGCAGAGT...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 72 bp TCCTGTGGATATGACATCAGGATGGGGCATATGGCATaGATACCTCAGAAGAGATCTAGTGATGGAACACTA +
Preference number: 3 (lower is better)
Translates to: SCGYDIRMGHMA*IPQKRSSDGTL
Trigger: TAGTGTTCCATCACTAGATCTCTTCTGAGGTATTCATGCCATATGCCCCATCCTGATGTCATATCCACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR TCA 72 bp GAAGAGCTATCCTGGACTCCTCCAATGACAATTCAGTaGCTCCTTTTGGTACTGTTTCCCAGAGATGTTTTC +
Preference number: 3 (lower is better)
Translates to: EELSWTPPMTIQ*LLLVLFPRDVF
Trigger: GAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGGATAGCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR CCA 72 bp GATTGTCCTGTGGATATGACATCAGGATGGGGCATATaGCATGAATACCTCAGAAGAGATCTAGTGATGGAA +
Preference number: 3 (lower is better)
Translates to: DCPVDMTSGWGI*HEYLRRDLVME
Trigger: TTCCATCACTAGATCTCTTCTGAGGTATTCATGCCATATGCCCCATCCTGATGTCATATCCACAGGACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR-3UTR CAA 90 bp TCTTTTCCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTGGATGGAGGATCTCTGTATGTACATCTaGAGGCAAACAGCAGAAATA +
Preference number: 3 (lower is better)
Translates to: SFPPEALAASLSNIWMEDLCMYI*RQTAEI
Trigger: TATTTCTGCTGTTTGCCTCAAGATGTACATACAGAG...ATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
3UTR-3UTR CAA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCTTGAAGACACTTTCCTaGGATCCTTTCATGTGTTTG +
Preference number: 3 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCLKTLS*DPFMCL
Trigger: CAAACACATGAAAGGATCCAAGGAAAGTGTCTTCAA...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCTTAAGACCTTACATTTaGGGAGGTTTTCATGGTACG +
Preference number: 3 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCLRPYI*GGFHGT
Trigger: CGTACCATGAAAACCTCCCAAAATGTAAGGTCTTAA...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATCCCCTCAAAGTGCTGTaGAAGGAAGGATATGAGGCT +
Preference number: 3 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYPLKVL*KEGYEA
Trigger: AGCCTCATATCCTTCCTTCAACAGCACTTTGAGGGG...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGGCTCTCCTGCTTTTCTaGTCTGTAGCCTCAACAGAG +
Preference number: 3 (lower is better)
Translates to: DSGGNARRELCFSKGDNKALLLF*SVASTE
Trigger: CTCTGTTGAGGCTACAGACAAGAAAAGCAGGAGAGC...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 72 bp TCATTCATCTGTATCCCCCGTGTGTCCCATACACATTaGCATTCTGTGGTCATTTGCTCAACAAATGTTCAG +
Preference number: 3 (lower is better)
Translates to: SFICIPRVSHTH*HSVVICSTNVQ
Trigger: CTGAACATTTGTTGAGCAAATGACCACAGAATGTCAATGTGTATGGGACACACGGGGGATACAGATGAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR GCA 72 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTaGACCATGTTTGGCCAACATGAGCAATTGCTTCCA +
Preference number: 3 (lower is better)
Translates to: KSVTLPEMEITR*TMFGQHEQLLP
Trigger: TGGAAGCAATTGCTCATGTTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR CCA 72 bp AAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTaGGATGCAGACTTCAGTTGGAAACATAAGAAAGAA +
Preference number: 3 (lower is better)
Translates to: KGAIWGSSETTS*DADFSWKHKKE
Trigger: TTCTTTCTTATGTTTCCAACTGAAGTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
3UTR CCA 72 bp GATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTaGTCACTGCAGTGTCTTCTCCCTTCAAAAGATCCA +
Preference number: 3 (lower is better)
Translates to: DESGKTMAIQNK*SLQCLLPSKDP
Trigger: TGGATCTTTTGAAGGGAGAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403681.7
ENST00000539662.1
3UTR-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGAGTAGATATATAAGATaGCCCGGGTGGTCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: DSGGNARRELCFSKGDNKSRYIR*PGWSFP
Trigger: TGGGAAGGACCACCCGGGCAATCTTATATATCTACT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAGATTATGGGACACACTaGATGTTTGCAGCTGATGAC +
Preference number: 3 (lower is better)
Translates to: SSITENTATEVMLVSGIQDYGTH*MFAADD
Trigger: GTCATCAGCTGCAAACATCAAGTGTGTCCCATAATC...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 72 bp CCCCACAAGACTCATATCCTCCACTTTTACACAACTTaGACTTGGCAGAAGTGTTCTTCAGTTGATTCATGT +
Preference number: 3 (lower is better)
Translates to: PHKTHILHFYTT*TWQKCSSVDSC
Trigger: ACATGAATCAACTGAAGAACACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAGTCTTGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR GCA 72 bp TTTGGTTCTTGCTTCTTTTCCTCCAGAAGCACTAGCTaGATCACTAAGCAACATCTGGATGGAGGATTTTAT +
Preference number: 3 (lower is better)
Translates to: FGSCFFSSRSTS*ITKQHLDGGFY
Trigger: ATAAAATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGAAAAGAAGCAAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393578.7
3UTR CCA 72 bp CCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTaGATGGAGGATTTTATACATGAGGTTAACAACTTT +
Preference number: 3 (lower is better)
Translates to: PPEALAASLSNI*MEDFIHEVNNF
Trigger: AAAGTTGTTAACCTCATGTATAAAATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
3UTR CCA 72 bp AATTCTGAGTCTGAACTCTCCTATAAAGGGCAAATCTaGAACAGGGTCTGTAAGATAGCCAGATTGATCCTT +
Preference number: 3 (lower is better)
Translates to: NSESELSYKGQI*NRVCKIARLIL
Trigger: AAGGATCAATCTGGCTATCTTACAGACCCTGTTCCAGATTTGCCCTTTATAGGAGAGTTCAGACTCAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CCA 72 bp ACACTGCAGAGTTGTGTAAGAAATGTGACCACCACTTaGGGAAACCCTGAAAAACGTAAAAATCCAGTAAGA +
Preference number: 3 (lower is better)
Translates to: TLQSCVRNVTTT*GNPEKRKNPVR
Trigger: TCTTACTGGATTTTTACGTTTTTCAGGGTTTCCCCAAGTGGTGGTCACATTTCTTACACAACTCTGCAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp TCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAAACGTAAAACTCCTCCTTTaGCAGATGAGGAAACTGGAC +
Preference number: 3 (lower is better)
Translates to: SIEVLRISTSLYVHLEANVKLLL*QMRKLD
Trigger: GTCCAGTTTCCTCATCTGCAAAAGGAGGAGTTTTAC...GTTTGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537275.5
3UTR-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAACCACCTATGATGTATTaGTTCTTGCCTCTCTACCTT +
Preference number: 3 (lower is better)
Translates to: SSITENTATEVMLVSGIQPPMMY*FLPLYL
Trigger: AAGGTAGAGAGGCAAGAACAAATACATCATAGGTGG...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATATGCAAAAGCAGGGCTaGTTGCATCTCACCTACAAA +
Preference number: 3 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDMQKQG*LHLTYK
Trigger: TTTGTAGGTGAGATGCAACAAGCCCTGCTTTTGCAT...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCTTAATAAAGTTGGGTaGAAGGTCTTGCTAGGGCAT +
Preference number: 3 (lower is better)
Translates to: DSGGNARRELCFSKGDNKLNKVG*KVLLGH
Trigger: ATGCCCTAGCAAGACCTTCAACCCAACTTTATTAAG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGATTGTTAGGACTTCTTaGTGTGCGTTAGCATCAGCT +
Preference number: 3 (lower is better)
Translates to: DSGGNARRELCFSKGDNKIVRTS*CALASA
Trigger: AGCTGATGCTAACGCACACAAAGAAGTCCTAACAAT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 72 bp TCATGTGTGCTCAGTCCAACTGATTTGTCAGTATCATaGGGATACGGTTTTGGTCTTCTCATTCCTTTATGT +
Preference number: 3 (lower is better)
Translates to: SCVLSPTDLSVS*GYGFGLLIPLC
Trigger: ACATAAAGGAATGAGAAGACCAAAACCGTATCCTCATGATACTGACAAATCAGTTGGACTGAGCACACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
3UTR GCA 72 bp CTAAACCCAATTCGGTTTTTCTCACCCGCCCACTCTTaGTTATCAGATCAACAAACTATTAGTAGGTTAAGA +
Preference number: 3 (lower is better)
Translates to: LNPIRFFSPAHS*LSDQQTISRLR
Trigger: TCTTAACCTACTAATAGTTTGTTGATCTGATAAGCAAGAGTGGGCGGGTGAGAAAAACCGAATTGGGTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR CCA 72 bp GAAGAGATGGTGAACTCAAGCCGAAGAAAAGCACCTTaGTCAACCATCTTATGTCAAAACGTATTACTTGAA +
Preference number: 3 (lower is better)
Translates to: EEMVNSSRRKAP*STILCQNVLLE
Trigger: TTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCGGCTTGAGTTCACCATCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR CAA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATACAAGTTCATTCCTTTaGAAGTCTGGAGGTAGGTCT +
Preference number: 3 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHTSSFL*KSGGRS
Trigger: AGACCTACCTCCAGACTTCAAAAGGAATGAACTTGT...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR-3UTR CAA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATACATTCTGTGGTCATTaGCTCAACAAATGTTCAGAC +
Preference number: 3 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYTFCGH*LNKCSD
Trigger: GTCTGAACATTTGTTGAGCAAATGACCACAGAATGT...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAATCTCTCATTGGGAAATaGAAAAGGAGCAGGTTTATA +
Preference number: 3 (lower is better)
Translates to: SSITENTATEVMLVSGIQSLIGK*KRSRFI
Trigger: TATAAACCTGCTCCTTTTCAATTTCCCAATGAGAGA...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAATTCATGTTTTGCCAGTaGGTACTAAACATTTACTGG +
Preference number: 3 (lower is better)
Translates to: SSITENTATEVMLVSGIQFMFCQ*VLNIYW
Trigger: CCAGTAAATGTTTAGTACCAACTGGCAAAACATGAA...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCAGTTAATAATCATTTaGATACGCTTCCTCTGCCCT +
Preference number: 3 (lower is better)
Translates to: DSGGNARRELCFSKGDNKQLIII*IRFLCP
Trigger: AGGGCAGAGGAAGCGTATCAAAATGATTATTAACTG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATAGAGTTCTACTTAATTaGATAGCTCATGACACTGCT +
Preference number: 3 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYRVLLN*IAHDTA
Trigger: AGCAGTGTCATGAGCTATCAAATTAAGTAGAACTCT...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR-3UTR CAA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATGTATTAATGTCCAACTaGCAATCAGTTCTAGCCATA +
Preference number: 3 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYVLMSN*QSVLAI
Trigger: TATGGCTAGAACTGATTGCAAGTTGGACATTAATAC...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 72 bp TTTCTCCAAATACTTTCCATCACTAAACTAGGTATGTaGCGAGCTCCTTTCCTAGGCAAGAATAGAAAAATG +
Preference number: 3 (lower is better)
Translates to: FLQILSITKLGM*RAPFLGKNRKM
Trigger: CATTTTTCTATTCTTGCCTAGGAAAGGAGCTCGTCACATACCTAGTTTAGTGATGGAAAGTATTTGGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
3UTR TCA 72 bp CTTTGTGACTTAGGCAGTATAAATCATTATGCTCCTTaGGTGAGTAGACGAGTGAGTATTTGTAAGTCTGAT +
Preference number: 3 (lower is better)
Translates to: LCDLGSINHYAP*VSRRVSICKSD
Trigger: ATCAGACTTACAAATACTCACTCGTCTACTCACTCAAGGAGCATAATGATTTATACTGCCTAAGTCACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR GCA 72 bp AAGACCTTACATTTTGGGAGGTTTTCATGGTACGATTaGAGACTATATATTCCTAACTTTGAAGGCTACAAC +
Preference number: 3 (lower is better)
Translates to: KTLHFGRFSWYD*RLYIPNFEGYN
Trigger: GTTGTAGCCTTCAAAGTTAGGAATATATAGTCTGCAATCGTACCATGAAAACCTCCCAAAATGTAAGGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR GCA 72 bp ATATTTTTGATTGCATTATGCAAAAGCAGGGCTTGTTaGATCTCACCTACAAAGCTTCAAGTTTCTTTGAAG +
Preference number: 3 (lower is better)
Translates to: IFLIALCKSRAC*ISPTKLQVSLK
Trigger: CTTCAAAGAAACTTGAAGCTTTGTAGGTGAGATGCAACAAGCCCTGCTTTTGCATAATGCAATCAAAAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR GCA 72 bp AGGATTTTCTTAGAAAGACCAGGTTTTAAAGCCAGTTaGTATTTGTTCCACATTAATTTGGGTCAGCAAGTT +
Preference number: 3 (lower is better)
Translates to: RIFLERPGFKAS*YLFHINLGQQV
Trigger: AACTTGCTGACCCAAATTAATGTGGAACAAATAGCAACTGGCTTTAAAACCTGGTCTTTCTAAGAAAATCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR TCA 72 bp TTGACTCATCTTCCCTATGACACTAAGCACAAGGGCTaGATCAATATTAACAAACCACATAAAGTGATTAAT +
Preference number: 3 (lower is better)
Translates to: LTHLPYDTKHKG*ININKPHKVIN
Trigger: ATTAATCACTTTATGTGGTTTGTTAATATTGATTCAGCCCTTGTGCTTAGTGTCATAGGGAAGATGAGTCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CCA 72 bp TGTACACTTAAGACCTTACATTTTGGGAGGTTTTCATaGTACGATTGCAGACTATATATTCCTAACTTTGAA +
Preference number: 3 (lower is better)
Translates to: CTLKTLHFGRFS*YDCRLYIPNFE
Trigger: TTCAAAGTTAGGAATATATAGTCTGCAATCGTACCATGAAAACCTCCCAAAATGTAAGGTCTTAAGTGTACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp GCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTGGTGGGTGCCGGAGGTaGAGGTGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARKASSGISRLPSPARALGGCRR*RWRWRW
Trigger: CCACCTCCACCGCCACCTCCACCTCCGGCACCCACC...AAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp CAGCCGCCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGCCGCGTCCTCTCTTCTaGGGCGCTGGGGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QPPGVSTLIPLRTRWTALPRPLF*GAGAAG
Trigger: ACCTGCCGCCCCAGCGCCTCAGAAGAGAGGACGCGG...CAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGGCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp CCATGCCAGCGACTGACCGCCCAGGGACAGGAGATGGAGACGTTCAGCTGCAAACGCCGCTACCGCCGCTaGAGCCGCTTCGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: PCQRLTAQGQEMETFSCKRRYRR*SRFAST
Trigger: GGTCGAGGCGAAGCGGCTGCAGCGGCGGTAGCGGCG...TTTGCAGCTGAACGTCTCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp GTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCGCTGAAGTGGACGGCTaGCCCGCGCCCTCACCGCGT +
Preference number: 4 (lower is better)
Translates to: VCHPTTCAQGQFRDQQASAEVDG*PAPSPR
Trigger: ACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGC...GGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp GGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCACGCCGCTACCGCCGCTaGAGCCGCTTCGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: GMCLSSHHLRARPVPGSARRYRR*SRFAST
Trigger: GGTCGAGGCGAAGCGGCTGCAGCGGCGGTAGCGGCG...TGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp AGGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGACGCGCCCTCACCGCGTaGGCTCATCCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RKGMCLSSHHLRARPVPGRALTA*AHPASR
Trigger: GCGGGAGGCAGGATGAGCGCACGCGGTGAGGGCGCG...TCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp ATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGCGGGCTGCGAGGGCTaGTGTTGCTTAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ILRDLPGLSRATSECKGKAGCEG*CCLGCR
Trigger: GCGGCAGCCTAAGCAACAGCAGCCCTCGCAGCCCGC...TTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp GTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCCCGGTTGGTTCTTGCTaGTGCTTCCTGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: VCHPTTCAQGQFRDQQASPVGSC*CFLGRP
Trigger: CGGCCGCCCCAGGAAGCAGCAGCAAGAACCAACCGG...GGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CCA 90 bp AGGGACAGGAGATGGAGACGTTCAGCTGCAAAGGCTACGGAGGAACCCCCGCAAGTCCCTGGGCTGAAGTaGACGGCTGCCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: RDRRWRRSAAKATEEPPQVPGLK*TAAPRP
Trigger: AGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGAC...TTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACGTCTCCATCTCCTGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp ATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTGCACGGGCTGCTAGCTCCTaGGTCTTGCACCAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: METYSGTYRGSLGPPLSARAASS*VLHQAR
Trigger: GCGCGCTTGGTGCAAGACTCAGGAGCTAGCAGCCCG...TGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp GCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTGTTGGGATCAGGAGTTaGGGGCACCGGGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: ARKASSGISRLPSPARALVGIRS*GHREHF
Trigger: GAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAAC...AAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp GTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCTTAGGCTGCCGCCGCTaGCACCATCAACACCGGACG +
Preference number: 4 (lower is better)
Translates to: VCHPTTCAQGQFRDQQASLGCRR*HHQHRT
Trigger: CGTCCGGTGTTGATGGTGGCAGCGGCGGCAGCCTAA...GGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp TGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCTGCGAGGGCTGCTGTTaGTTAGGCTGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CLSSHHLRARPVPGSAGFCEGCC*LGCRRC
Trigger: GCAGCGGCGGCAGCCTAAGCAACAGCAGCCCTCGCA...GAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGGCGGGCTGCGAGGGCTaGTGTTGCTTAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLEAGCEG*CCLGCR
Trigger: GCGGCAGCCTAAGCAACAGCAGCCCTCGCAGCCCGC...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp GGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGGTGATAGACGGTGGGTGCCGGAGGTaGAGGTGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GVSTLIPLRTRWTALVIDGGCRR*RWRWRW
Trigger: CCACCTCCACCGCCACCTCCACCTCCGGCACCCACC...GTCTATCACCAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp GACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTGCGGCAGGTTGTCCCTaGGCTGAAGTGGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: DLPGLSRATSECKGKECSAAGCP*AEVDGC
Trigger: GCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGC...ACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp TGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCGCGGCAGGTTGTCCCTaGGCTGAAGTGGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: CLSSHHLRARPVPGSAGFAAGCP*AEVDGC
Trigger: GCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGC...GAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR TCA 90 bp CCGCCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGGTGGCACCTTTCGGGAGATaGGGTGATAGGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PPGVSTLIPLRTRWTALVAPFGR*GDRAGD
Trigger: GTCCCCAGCCCTATCACCTCATCTCCCGAAAGGTGC...CACCAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp GCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCTCTCGGGCCACCTCTaGGTGCAAGGGAAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: ARKASSGISRLPSPARALLSGHL*VQGKRV
Trigger: CACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAG...AAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGTGCGAGGGCTGCTGTTaGTTAGGCTGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLECEGCC*LGCRRC
Trigger: GCAGCGGCGGCAGCCTAAGCAACAGCAGCCCTCGCA...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp GAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGTGCGAGGGCTGCTGTTaGTTAGGCTGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ECVCHPTTCAQGQFRDQQCEGCC*LGCRRC
Trigger: GCAGCGGCGGCAGCCTAAGCAACAGCAGCCCTCGCA...CTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGCGCGAGCTGGCGGGCTaGGAGGGCTGCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLERELAG*EGCCCL
Trigger: TAAGCAACAGCAGCCCTCGCAGCCCGCCAGCTCGCG...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp AGGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGACTTGCTGCTGCTTCCTaGGGCGGCCGCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RKGMCLSSHHLRARPVPGLAAAS*GGRVLS
Trigger: AGAGAGGACGCGGCCGCCCCAGGAAGCAGCAGCAAG...TCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp GTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACCGCGAGCTGGCGGGCTaGGAGGGCTGCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: VPGSAGFLHQHGLFISNHRELAG*EGCCCL
Trigger: TAAGCAACAGCAGCCCTCGCAGCCCGCCAGCTCGCG...GTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp AAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCACCGGTTGGTTCTTGCTaGTGCTTCCTGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: KGMCLSSHHLRARPVPGSPVGSC*CFLGRP
Trigger: CGGCCGCCCCAGGAAGCAGCAGCAAGAACCAACCGG...TGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp TGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCTGTCATCCCACCACTTaGGCGCAAGGCCAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: CLSSHHLRARPVPGSAGFCHPTT*AQGQFR
Trigger: CCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACA...GAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR CCA 90 bp TCCATGCCTTCTGCAGCATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGCTCCTCTCGCGGGTTaGGATCAGGAGTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SMPSAAWKHTPGPTGALSAPLAG*DQELRA
Trigger: TGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGC...CGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp AATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGTCTCTTCTGAGGCGCTaGGGCGGCAGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: NVSVIPPLARKASSGISRSLLRR*GGRLSL
Trigger: CAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGA...CCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp CGTTCAGCTGCAAAGGCTACGGAGGAACCCCCGCAATTGGAATCTCTCCATGCCGCACCAAGCGCGCGCTaGCCGGGCTGGAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RSAAKATEEPPQLESLHAAPSAR*PGWKFS
Trigger: AGAAAACTTCCAGCCCGGGCAGCGCGCGCTTGGTGC...GGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp GTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACCTAGCTCCTGAGTCTTaGACCAAGCGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VPGSAGFLHQHGLFISNHLAPES*TKRALP
Trigger: GGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAG...GTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGGTTGGGATCAGGAGTTaGGGGCACCGGGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLEVGIRS*GHREHF
Trigger: GAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAAC...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp TCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGGTGATAGACAACTGGCGCGAGCTGGCGGGCTaGGAGGGCTGCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: STLIPLRTRWTALVIDNWRELAG*EGCCCL
Trigger: TAAGCAACAGCAGCCCTCGCAGCCCGCCAGCTCGCG...CCAGTTGTCTATCACCAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp GACAGCTTTGGTGATAGACAACTGGGAGGTAAAACTCCACAGAGCCATGCCAGCGCTGAAGTGGACGGCTaGCCCGCGCCCTCACCGCGT +
Preference number: 4 (lower is better)
Translates to: DSFGDRQLGGKTPQSHASAEVDG*PAPSPR
Trigger: ACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGC...GCTGGCATGGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp CCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACGTTGGTTCTTGCTGCTaGTTCCTGGGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: PVPGSAGFLHQHGLFISNVGSCC*FLGRPR
Trigger: ACGCGGCCGCCCCAGGAAGCAGCAGCAAGAACCAAC...GTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp TCCATGCCTTCTGCAGCATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGAACTCCACAGAGCCATaGCAGCGACTGACCGCCCAG +
Preference number: 4 (lower is better)
Translates to: SMPSAAWKHTPGPTGALSNSTEP*QRLTAQ
Trigger: CTGGGCGGTCAGTCGCTGGCATGGCTCTGTGGAGTT...CGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGGCGCGCTGCCCGGGCTaGAAGTTTTCTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLEARCPG*KFSEFL
Trigger: CAGGAACTCAGAAAACTTCCAGCCCGGGCAGCGCGC...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp CAGCCGCCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGGAAAGCAAAGGAGGATaGGGAGACTCCGCCGGGATA +
Preference number: 4 (lower is better)
Translates to: QPPGVSTLIPLRTRWTALESKGG*GDSAGI
Trigger: TATCCCGGCGGAGTCTCCCCATCCTCCTTTGCTTTC...CAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGGCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp GCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGGTGATAGACAACTGGGAGGTCTTGCTGCTGCTTCCTaGGGCGGCCGCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: AHSPPDKVDSFGDRQLGGLAAAS*GGRVLS
Trigger: AGAGAGGACGCGGCCGCCCCAGGAAGCAGCAGCAAG...ACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp CAGCCGCCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGAGAGGGCTCACCGGTTaGTTCTTGCTGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QPPGVSTLIPLRTRWTALRGLTG*FLLLLP
Trigger: AGGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCT...CAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGGCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp GTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCCCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VCHPTTCAQGQFRDQQASPRSAS*PFFSSG
Trigger: GCCACTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...GGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR CCA 90 bp CGCCCAGGGACAGGAGATGGAGACGTTCAGCTGCAAAGGCTACGGAGGAACCCCCCCAGGGACAGGAGATaGAGACGTTCAGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RPGTGDGDVQLQRLRRNPPRDRR*RRSAAK
Trigger: CTTTGCAGCTGAACGTCTCCATCTCCTGTCCCTGGG...GGGGTTCCTCCGTAGCCTTTGCAGCTGAACGTCTCCATCTCCTGTCCCTGGGCG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp AACTGGGAGGTAAAACTCCACAGAGCCATGCCAGCGACTGACCGCCCAGGGACATGCTGTTGCTTAGGCTaGCGCCGCTGCCACCATCAA +
Preference number: 4 (lower is better)
Translates to: NWEVKLHRAMPATDRPGTCCCLG*RRCHHQ
Trigger: TTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCA...TGTCCCTGGGCGGTCAGTCGCTGGCATGGCTCTGTGGAGTTTTACCTCCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp AAGGTGGACAGCTTTGGTGATAGACAACTGGGAGGTAAAACTCCACAGAGCCATCGCGCCCTCACCGCGTaGGCTCATCCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KVDSFGDRQLGGKTPQSHRALTA*AHPASR
Trigger: GCGGGAGGCAGGATGAGCGCACGCGGTGAGGGCGCG...ATGGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp GGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGTGTCATCCCACCACTTaGGCGCAAGGCCAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GLSRATSECKGKECSSRKCHPTT*AQGQFR
Trigger: CCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACA...CTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR GCA 90 bp ATGCCTTCTGCAGCATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGGCCGGGCCACCTCTGAGTaGAAGGGAAAAGAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: MPSAAWKHTPGPTGALSGRATSE*KGKECS
Trigger: ACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCG...GCCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACGTCCCTGGGCTGAAGTaGACGGCTGCCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SYKGAIWGSSETTSWDADVPGLK*TAAPRP
Trigger: AGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGAC...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp GCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTGTGAATTGTGTCCCTTaGAATGTTAGGCGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ARKASSGISRLPSPARALVNCVP*NVRRGK
Trigger: CTTTCCCCGCCTAACATTTCAAGGGACACAATTCAC...AAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGCCGCGTCCTCTCTTCTaGGGCGCTGGGGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQPRPLF*GAGAAG
Trigger: ACCTGCCGCCCCAGCGCCTCAGAAGAGAGGACGCGG...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp AAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCACGGACGTCCAGCGGCTaGCAAAAAGAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KGMCLSSHHLRARPVPGSRTSSG*QKEKRG
Trigger: TCCCCTCTTCTCTTTTTGGCAGCCGCTGGACGTCCG...TGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR GCA 90 bp CCGCAATTGGAATCTCTCCATGCCTTCTGCAGCATGGAAACATACTCCGGGACCGTTGGTTCTTGCTGCTaGTTCCTGGGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: PQLESLHAFCSMETYSGTVGSCC*FLGRPR
Trigger: ACGCGGCCGCCCCAGGAAGCAGCAGCAAGAACCAAC...GGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp AATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCGGGCCACCTCTGAGTaGAAGGGAAAAGAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: NVSVIPPLARKASSGISRRATSE*KGKECS
Trigger: ACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCG...CCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR TCA 90 bp GACAGGAGATGGAGACGTTCAGCTGCAAAGGCTACGGAGGAACCCCCGCAATTGAAGGAAGAGAGGCTTTaGGGTCGCAGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DRRWRRSAAKATEEPPQLKEERL*GRRGSS
Trigger: AGAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTT...CAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACGTCTCCATCTCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp CAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACCTCGAGATGCTTAGCACCTTTCGGGAGATaGGGTGATAGGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QASFTSTGSSLATTSRCLAPFGR*GDRAGD
Trigger: GTCCCCAGCCCTATCACCTCATCTCCCGAAAGGTGC...TAAGCATCTCGAGGTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATACCGCGTCCTCTCTTCTaGGGCGCTGGGGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIPRPLF*GAGAAG
Trigger: ACCTGCCGCCCCAGCGCCTCAGAAGAGAGGACGCGG...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGGCGGGCTGCGAGGGCTaGTGTTGCTTAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQAGCEG*CCLGCR
Trigger: GCGGCAGCCTAAGCAACAGCAGCCCTCGCAGCCCGC...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp CCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGCTGGGGATTGCTGGCCGGTTGGTTCTTGCTaGTGCTTCCTGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PLPNKGNQQPEKPAGDCWPVGSC*CFLGRP
Trigger: CGGCCGCCCCAGGAAGCAGCAGCAAGAACCAACCGG...CCAGCAATCCCCAGCTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR GCA 90 bp ATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTGCAGACTCTTGTTTTTGCTaGCTTTGGGTCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: METYSGTYRGSLGPPLSADSCFC*LWVFPW
Trigger: CCAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTC...TGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp CCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCGGGCCACCTCTGAGTaGAAGGGAAAAGAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PVPGSAGFLHQHGLFISNRATSE*KGKECS
Trigger: ACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCG...GTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp CCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACGAAAGCAAAGGAGGATaGGGAGACTCCGCCGGGATA +
Preference number: 4 (lower is better)
Translates to: PVPGSAGFLHQHGLFISNESKGG*GDSAGI
Trigger: TATCCCGGCGGAGTCTCCCCATCCTCCTTTGCTTTC...GTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAGGTGGGTGCCGGAGGTaGAGGTGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIGGCRR*RWRWRW
Trigger: CCACCTCCACCGCCACCTCCACCTCCGGCACCCACC...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp AAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAAGAGGGCTCACCGGTTaGTTCTTGCTGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KGMCLSSHHLRARPVPGSRGLTG*FLLLLP
Trigger: AGGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCT...TGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CCA 90 bp CAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCCCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QFRDQQASFTSTGSSLATPRSAS*PFFSSG
Trigger: GCCACTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...GGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp ATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAATGCCTTCTGCAGCATaGAAACATACTCCGGGACCT +
Preference number: 4 (lower is better)
Translates to: ILRDLPGLSRATSECKGKMPSAA*KHTPGP
Trigger: AGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCAT...TTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp CGTTCAGCTGCAAAGGCTACGGAGGAACCCCCGCAATTGGAATCTCTCCATGCCCCCCTCCGGACAAGGTaGACAGCTTTGGTGATAGAC +
Preference number: 4 (lower is better)
Translates to: RSAAKATEEPPQLESLHAPLRTR*TALVID
Trigger: GTCTATCACCAAAGCTGTCCACCTTGTCCGGAGGGG...GGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGCGGGCTGCTAGCTCCTaGGTCTTGCACCAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQRAASS*VLHQAR
Trigger: GCGCGCTTGGTGCAAGACTCAGGAGCTAGCAGCCCG...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp TCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAACTCTCGGGCCACCTCTaGGTGCAAGGGAAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: SLGPPLSAREKSAVQGRELSGHL*VQGKRV
Trigger: CACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAG...TTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR TCA 90 bp AAGGTGGACAGCTTTGGTGATAGACAACTGGGAGGTAAAACTCCACAGAGCCATAGCCATGCCAGCGACTaGCCGCCCAGGGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: KVDSFGDRQLGGKTPQSHSHASD*PPRDRR
Trigger: TCTCCTGTCCCTGGGCGGTCAGTCGCTGGCATGGCT...ATGGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACCTAGCTCCTGAGTCTTaGACCAAGCGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SYKGAIWGSSETTSWDADLAPES*TKRALP
Trigger: GGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAG...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCGCGGGCTGCGAGGGCTaGTGTTGCTTAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCAGCEG*CCLGCR
Trigger: GCGGCAGCCTAAGCAACAGCAGCCCTCGCAGCCCGC...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGCGCGAGCTGGCGGGCTaGGAGGGCTGCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQRELAG*EGCCCL
Trigger: TAAGCAACAGCAGCCCTCGCAGCCCGCCAGCTCGCG...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCGCCGCTACCGCCGCTaGAGCCGCTTCGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVRRYRR*SRFAST
Trigger: GGTCGAGGCGAAGCGGCTGCAGCGGCGGTAGCGGCG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCGCTGAAGTGGACGGCTaGCCCGCGCCCTCACCGCGT +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFAEVDG*PAPSPR
Trigger: ACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGC...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACGTTGGTTCTTGCTGCTaGTTCCTGGGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: SYKGAIWGSSETTSWDADVGSCC*FLGRPR
Trigger: ACGCGGCCGCCCCAGGAAGCAGCAGCAAGAACCAAC...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGCCGGTTGGTTCTTGCTaGTGCTTCCTGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQPVGSC*CFLGRP
Trigger: CGGCCGCCCCAGGAAGCAGCAGCAAGAACCAACCGG...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGGACTCTTGTTTTTGCTaGCTTTGGGTCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLEDSCFC*LWVFPW
Trigger: CCAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTC...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp AATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGGACTCTTGTTTTTGCTaGCTTTGGGTCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NVSVIPPLARKASSGISRDSCFC*LWVFPW
Trigger: CCAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTC...CCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR GCA 90 bp CGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAGACTCTTGTTTTTGCTaGCTTTGGGTCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RGSLGPPLSAREKSAVQGDSCFC*LWVFPW
Trigger: CCAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTC...TCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR GCA 90 bp CCGCCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGGTGATTGGAATCTCTCCATaGCTTCTGCAGCATGGAAAC +
Preference number: 4 (lower is better)
Translates to: PPGVSTLIPLRTRWTALVIGISP*LLQHGN
Trigger: GTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAAT...CACCAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp CGTTCAGCTGCAAAGGCTACGGAGGAACCCCCGCAATTGGAATCTCTCCATGCCATGGAGACGTTCAGCTaGAAAGGCTACGGAGGAACC +
Preference number: 4 (lower is better)
Translates to: RSAAKATEEPPQLESLHAMETFS*KGYGGT
Trigger: GGTTCCTCCGTAGCCTTTGCAGCTGAACGTCTCCAT...GGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGCCGAGATTGTACCACTaGACTCCAGCCCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLEPRLYH*TPAHFL
Trigger: TAGGAAATGGGCTGGAGTGCAGTGGTACAATCTCGG...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp GGAACCCCCGCAATTGGAATCTCTCCATGCCTTCTGCAGCATGGAAACATACTCGCGCGCTGCCCGGGCTaGAAGTTTTCTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GTPAIGISPCLLQHGNILARCPG*KFSEFL
Trigger: CAGGAACTCAGAAAACTTCCAGCCCGGGCAGCGCGC...GAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp TTGGTAGTAGATTGTCCTGTGGATATGACATCAGGATGGGGCATATGGCATGAAGGTGGGTGCCGGAGGTaGAGGTGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LVVDCPVDMTSGWGIWHEGGCRR*RWRWRW
Trigger: CCACCTCCACCGCCACCTCCACCTCCGGCACCCACC...TTCATGCCATATGCCCCATCCTGATGTCATATCCACAGGACAATCTACTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp GTACTGCACACACCCCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGGCGGCAGGTTGTCCCTaGGCTGAAGTGGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLHTPHYQIKGISSLRNQAAGCP*AEVDGC
Trigger: GCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGC...CTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGGGGTGTGTGCAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CCA 90 bp GGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATTGTTTTTGCTGCCTTTaGGTCTTCCCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GRECVCHPTTCAQGQFRDCFCCL*VFPWVS
Trigger: AGAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACA...ATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR CCA 90 bp AATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGTGTTTTTGCTGCCTTTaGGTCTTCCCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NVSVIPPLARKASSGISRCFCCL*VFPWVS
Trigger: AGAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACA...CCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR CCA 90 bp CTCCATGCCTTCTGCAGCATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCAGGAACCCCCGCAATTaGAATCTCTCCATGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LHAFCSMETYSGTYRGSLRNPRN*NLSMPS
Trigger: AGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCT...GAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp ATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGGAAGAGACTTGGAGTaGATTGTGTCCCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: ILRDLPGLSRATSECKGKGRDLE*IVSLEM
Trigger: CATTTCAAGGGACACAATTCACTCCAAGTCTCTTCC...TTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp CAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACCTCGAGATGCTTAAAGGAAGAGAGGCTTTaGGGTCGCAGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QASFTSTGSSLATTSRCLKEERL*GRRGSS
Trigger: AGAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTT...TAAGCATCTCGAGGTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACGCACCTTTCGGGAGATaGGGTGATAGGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SYKGAIWGSSETTSWDADAPFGR*GDRAGD
Trigger: GTCCCCAGCCCTATCACCTCATCTCCCGAAAGGTGC...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCCGCGTCCTCTCTTCTaGGGCGCTGGGGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVPRPLF*GAGAAG
Trigger: ACCTGCCGCCCCAGCGCCTCAGAAGAGAGGACGCGG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp TTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGCCGCGTCCTCTCTTCTaGGGCGCTGGGGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LEERLLSCNVKLLLLQMRPRPLF*GAGAAG
Trigger: ACCTGCCGCCCCAGCGCCTCAGAAGAGAGGACGCGG...CCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR TCA 90 bp ACTTGGCAGAAGTGTTCTTCAGTTGATTCATGTGTGCTCAGTCCAACTGATTTGCCGCGTCCTCTCTTCTaGGGCGCTGGGGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TWQKCSSVDSCVLSPTDLPRPLF*GAGAAG
Trigger: ACCTGCCGCCCCAGCGCCTCAGAAGAGAGGACGCGG...CAAATCAGTTGGACTGAGCACACATGAATCAACTGAAGAACACTTCTGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp AATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGGCTTCTGCTTTCTTTTaGGCTGCTTTAGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: NVSVIPPLARKASSGISRASAFF*AALEGL
Trigger: GAGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGC...CCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR TCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGCCTGGACTCCTCCAATaGCAATTCAGTGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLEPGLLQ*QFSDSF
Trigger: AAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGG...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGGCACCAAGCGCGCGCTaGCCGGGCTGGAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQAPSAR*PGWKFS
Trigger: AGAAAACTTCCAGCCCGGGCAGCGCGCGCTTGGTGC...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp AAGGTGGACAGCTTTGGTGATAGACAACTGGGAGGTAAAACTCCACAGAGCCATCTAGCTCCTGAGTCTTaGACCAAGCGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KVDSFGDRQLGGKTPQSHLAPES*TKRALP
Trigger: GGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAG...ATGGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp ACAAGGTGGACAGCTTTGGTGATAGACAACTGGGAGGTAAAACTCCACAGAGCCGTTGGGATCAGGAGTTaGGGGCACCGGGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: TRWTALVIDNWEVKLHRAVGIRS*GHREHF
Trigger: GAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAAC...GGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp GGAACCCCCGCAATTGGAATCTCTCCATGCCTTCTGCAGCATGGAAACATACTCCGGACGTCCAGCGGCTaGCAAAAAGAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GTPAIGISPCLLQHGNILRTSSG*QKEKRG
Trigger: TCCCCTCTTCTCTTTTTGGCAGCCGCTGGACGTCCG...GAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGTTAGGCTGCCGCCGCTaGCACCATCAACACCGGACG +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQLGCRR*HHQHRT
Trigger: CGTCCGGTGTTGATGGTGGCAGCGGCGGCAGCCTAA...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp GTACTGCACACACCCCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGTTAGGCTGCCGCCGCTaGCACCATCAACACCGGACG +
Preference number: 4 (lower is better)
Translates to: VLHTPHYQIKGISSLRNQLGCRR*HHQHRT
Trigger: CGTCCGGTGTTGATGGTGGCAGCGGCGGCAGCCTAA...CTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGGGGTGTGTGCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR GCA 90 bp TTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACCGCCGCTACCGCCGCTaGAGCCGCTTCGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: FNWQDWLMEFYRSSENQHRRYRR*SRFAST
Trigger: GGTCGAGGCGAAGCGGCTGCAGCGGCGGTAGCGGCG...GTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAACGCCGCTACCGCCGCTaGAGCCGCTTCGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQRRYRR*SRFAST
Trigger: GGTCGAGGCGAAGCGGCTGCAGCGGCGGTAGCGGCG...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCCGCGCCCTCACCGCGTaGGCTCATCCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLRALTA*AHPASR
Trigger: GCGGGAGGCAGGATGAGCGCACGCGGTGAGGGCGCG...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAACGCGCCCTCACCGCGTaGGCTCATCCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQRALTA*AHPASR
Trigger: GCGGGAGGCAGGATGAGCGCACGCGGTGAGGGCGCG...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATACCGGTTGGTTCTTGCTaGTGCTTCCTGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIPVGSC*CFLGRP
Trigger: CGGCCGCCCCAGGAAGCAGCAGCAAGAACCAACCGG...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp GTAAAACTCCACAGAGCCATGCCAGCGACTGACCGCCCAGGGACAGGAGATGGATCTCTCCATGCCTTCTaGAGCATGGAAACATACTCC +
Preference number: 4 (lower is better)
Translates to: VKLHRAMPATDRPGTGDGSLHAF*SMETYS
Trigger: GGAGTATGTTTCCATGCTGCAGAAGGCATGGAGAGA...TCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCATGGCTCTGTGGAGTTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp GGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAAGATTGAAAGTGCCTTaGGCAGTCGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GMCLSSHHLRARPVPGSARLKVP*AVGKQR
Trigger: CCTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCT...TGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CCA 90 bp GTACTGCACACACCCCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGGCTCCTCTCGCGGGTTaGGATCAGGAGTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VLHTPHYQIKGISSLRNQAPLAG*DQELRA
Trigger: TGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGC...CTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGGGGTGTGTGCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCGGTGGGTGCCGGAGGTaGAGGTGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFGGCRR*RWRWRW
Trigger: CCACCTCCACCGCCACCTCCACCTCCGGCACCCACC...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTGTCCCTGGGCTGAAGTaGACGGCTGCCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVVPGLK*TAAPRP
Trigger: AGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGAC...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp CCTGTGGATATGACATCAGGATGGGGCATATGGCATGAATACCTCAGAAGAGATGCGGCAGGTTGTCCCTaGGCTGAAGTGGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVDMTSGWGIWHEYLRRDAAGCP*AEVDGC
Trigger: GCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGC...ATCTCTTCTGAGGTATTCATGCCATATGCCCCATCCTGATGTCATATCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp GCTATCCTGGACTCCTCCAATGACAATTCAGTGACTCCTTTTGGTACTGTTTCCCTTGCTGCTGCTTCCTaGGGCGGCCGCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: AILDSSNDNSVTPFGTVSLAAAS*GGRVLS
Trigger: AGAGAGGACGCGGCCGCCCCAGGAAGCAGCAGCAAG...GGAAACAGTACCAAAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGGATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR CAA 72 bp CGTTCAGCTGCAAAGGCTACGGAGGAACCCCCGCAATaGGAATCTCTCCATGCCTTCTGCAGCATGGAAACA +
Preference number: 4 (lower is better)
Translates to: RSAAKATEEPPQ*ESLHAFCSMET
Trigger: TGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp TCCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTGGATGGAGGATTTTATCGGGCTGCTAGCTCCTaGGTCTTGCACCAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: SSRSTSCITKQHLDGGFYRAASS*VLHQAR
Trigger: GCGCGCTTGGTGCAAGACTCAGGAGCTAGCAGCCCG...ATAAAATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR TCA 90 bp GACAGGAGATGGAGACGTTCAGCTGCAAAGGCTACGGAGGAACCCCCGCAATTGGCTTCTGCTTTCTTTTaGGCTGCTTTAGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: DRRWRRSAAKATEEPPQLASAFF*AALEGL
Trigger: GAGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGC...CAATTGCGGGGGTTCCTCCGTAGCCTTTGCAGCTGAACGTCTCCATCTCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp GGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGAGATCCAACTGCTGCTaGGGTAGAAATCGAACGTTG +
Preference number: 4 (lower is better)
Translates to: GLSRATSECKGKECSSRKRSNCC*GRNRTL
Trigger: CAACGTTCGATTTCTACCTCAGCAGCAGTTGGATCT...CTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS-3UTR GCA 90 bp GCTATCCTGGACTCCTCCAATGACAATTCAGTGACTCCTTTTGGTACTGTTTCCTTAGGCTGCCGCCGCTaGCACCATCAACACCGGACG +
Preference number: 4 (lower is better)
Translates to: AILDSSNDNSVTPFGTVSLGCRR*HHQHRT
Trigger: CGTCCGGTGTTGATGGTGGCAGCGGCGGCAGCCTAA...GGAAACAGTACCAAAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR GCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATATTAGGCTGCCGCCGCTaGCACCATCAACACCGGACG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWILGCRR*HHQHRT
Trigger: CGTCCGGTGTTGATGGTGGCAGCGGCGGCAGCCTAA...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACTGCTGTTGCTTAGGCTaGCGCCGCTGCCACCATCAA +
Preference number: 4 (lower is better)
Translates to: SYKGAIWGSSETTSWDADCCCLG*RRCHHQ
Trigger: TTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCA...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCGCGGGCTGCGAGGGCTaGTGTTGCTTAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFAGCEG*CCLGCR
Trigger: GCGGCAGCCTAAGCAACAGCAGCCCTCGCAGCCCGC...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATCGCGCCCTCACCGCGTaGGCTCATCCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNRALTA*AHPASR
Trigger: GCGGGAGGCAGGATGAGCGCACGCGGTGAGGGCGCG...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp TCAGCACATCTCTGTATGTACATCTTGAGGCAAACAGCAGAAATACTTCTTTTCCGCGCCCTCACCGCGTaGGCTCATCCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SAHLCMYILRQTAEILLFRALTA*AHPASR
Trigger: GCGGGAGGCAGGATGAGCGCACGCGGTGAGGGCGCG...GAAAAGAAGTATTTCTGCTGTTTGCCTCAAGATGTACATACAGAGATGTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCGCTGAAGTGGACGGCTaGCCCGCGCCCTCACCGCGT +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLAEVDG*PAPSPR
Trigger: ACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGC...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp GCTATCCTGGACTCCTCCAATGACAATTCAGTGACTCCTTTTGGTACTGTTTCCGTTGGTTCTTGCTGCTaGTTCCTGGGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: AILDSSNDNSVTPFGTVSVGSCC*FLGRPR
Trigger: ACGCGGCCGCCCCAGGAAGCAGCAGCAAGAACCAAC...GGAAACAGTACCAAAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR GCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAGTTGGTTCTTGCTGCTaGTTCCTGGGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIVGSCC*FLGRPR
Trigger: ACGCGGCCGCCCCAGGAAGCAGCAGCAAGAACCAAC...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp AGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCTGGTTCCCGGTTGGTTCTTGCTaGTGCTTCCTGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SDSFWYCFPEMFSSWSWFPVGSC*CFLGRP
Trigger: CGGCCGCCCCAGGAAGCAGCAGCAAGAACCAACCGG...GAACCAGCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR GCA 90 bp AGCATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTTTCTCCAGTGGCTTCTaGTTTCTTTTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SMETYSGTYRGSLGPPLSFSSGF*FLLSCF
Trigger: AAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAA...ACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp GTAAAACTCCACAGAGCCATGCCAGCGACTGACCGCCCAGGGACAGGAGATGGATGCAAGGGAAAAGAGTaGAGTTCAAGGAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: VKLHRAMPATDRPGTGDGCKGKE*SSRKGM
Trigger: CATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCA...TCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCATGGCTCTGTGGAGTTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR GCA 90 bp CCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACCTCTGCAAGGGAAAAGAGTaGAGTTCAAGGAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: PGSAGFLHQHGLFISNHLCKGKE*SSRKGM
Trigger: CATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCA...GAGGTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp GGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATTGCAAGGGAAAAGAGTaGAGTTCAAGGAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: GRECVCHPTTCAQGQFRDCKGKE*SSRKGM
Trigger: CATTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCA...ATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR GCA 90 bp CCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCTGACTAATAGCTCATaGCTCAACTCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PVPGSAGFLHQHGLFISNLTNSS*LNSVSP
Trigger: TGGGGACACAGAGTTGAGGCATGAGCTATTAGTCAG...GTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp GTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACAGATTGAAAGTGCCTTaGGCAGTCGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VPGSAGFLHQHGLFISNHRLKVP*AVGKQR
Trigger: CCTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCT...GTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCGTCCCTGGGCTGAAGTaGACGGCTGCCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLVPGLK*TAAPRP
Trigger: AGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGAC...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp TTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACGTCCCTGGGCTGAAGTaGACGGCTGCCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: FNWQDWLMEFYRSSENQHVPGLK*TAAPRP
Trigger: AGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGAC...GTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp TCAGTCCAACTGATTTGTCAGTATCATGAGGATACGGTTTTGGTCTTCTCATTCGTCCCTGGGCTGAAGTaGACGGCTGCCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SVQLICQYHEDTVLVFSFVPGLK*TAAPRP
Trigger: AGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGAC...GAATGAGAAGACCAAAACCGTATCCTCATGATACTGACAAATCAGTTGGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAGTCCCTGGGCTGAAGTaGACGGCTGCCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQVPGLK*TAAPRP
Trigger: AGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGAC...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCCTTGCTGCTGCTTCCTaGGGCGGCCGCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFLAAAS*GGRVLS
Trigger: AGAGAGGACGCGGCCGCCCCAGGAAGCAGCAGCAAG...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGCTGTCCCCGCAGGCATaGCTCTGCATGTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQLSPQA*LCMCLE
Trigger: CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAG...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp CCCCCTAGTCCTCTTCGGCAGACTCTTGTGAGGATGTCTCTTCAGTTTCCTCCTGTAGAAATCGAACGTTaGCGCCCCCTAGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PPSPLRQTLVRMSLQFPPVEIER*RPLVLF
Trigger: GAAGAGGACTAGGGGGCGCCAACGTTCGATTTCTAC...AGGAGGAAACTGAAGAGACATCCTCACAAGAGTCTGCCGAAGAGGACTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS-3UTR CCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGTCAGGATGGGGCATATaGCATGAATACCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLESGWGI*HEYLRR
Trigger: TCTTCTGAGGTATTCATGCCATATGCCCCATCCTGA...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR CAA 72 bp TCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTaGGTGATAGACAACTGGGAGGTAAAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: STLIPLRTRWTA*VIDNWEVKLHR
Trigger: TCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp GACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTCCGCGTCCTCTCTTCTaGGGCGCTGGGGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DWLMEFYRSSENQHISVCPRPLF*GAGAAG
Trigger: ACCTGCCGCCCCAGCGCCTCAGAAGAGAGGACGCGG...ACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp AAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGAAGTGTTCTTCAGTTaGTTCATGTGTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: KGMCLSSHHLRARPVPGSEVFFS*FMCAQS
Trigger: GGACTGAGCACACATGAATCAACTGAAGAACACTTC...TGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp TCTTTTCCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTGGATGGAGGATGTTGGGATCAGGAGTTaGGGGCACCGGGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: SFPPEALAASLSNIWMEDVGIRS*GHREHF
Trigger: GAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAAC...ATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR GCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGCGGACGTCCAGCGGCTaGCAAAAAGAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQRTSSG*QKEKRG
Trigger: TCCCCTCTTCTCTTTTTGGCAGCCGCTGGACGTCCG...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp CTCATATCCTCCACTTTTACACAACTTGAACTTGGCAGAAGTGTTCTTCAGTTGGCGGGCTGCGAGGGCTaGTGTTGCTTAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LISSTFTQLELGRSVLQLAGCEG*CCLGCR
Trigger: GCGGCAGCCTAAGCAACAGCAGCCCTCGCAGCCCGC...CAACTGAAGAACACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATACGCCGCTACCGCCGCTaGAGCCGCTTCGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: KATHKAHRCNGQFLKVKIRRYRR*SRFAST
Trigger: GGTCGAGGCGAAGCGGCTGCAGCGGCGGTAGCGGCG...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCGCCGCTACCGCCGCTaGAGCCGCTTCGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENRRYRR*SRFAST
Trigger: GGTCGAGGCGAAGCGGCTGCAGCGGCGGTAGCGGCG...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TCTTTTCAAACTGATGAACACCACATGACACCAAATCTCTGCTATTGGAAGAAACGCGCCCTCACCGCGTaGGCTCATCCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SFQTDEHHMTPNLCYWKKRALTA*AHPASR
Trigger: GCGGGAGGCAGGATGAGCGCACGCGGTGAGGGCGCG...TTTCTTCCAATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAGTTTGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTACGCGCCCTCACCGCGTaGGCTCATCCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVRALTA*AHPASR
Trigger: GCGGGAGGCAGGATGAGCGCACGCGGTGAGGGCGCG...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp GACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTGCTGAAGTGGACGGCTaGCCCGCGCCCTCACCGCGT +
Preference number: 4 (lower is better)
Translates to: DWLMEFYRSSENQHISVCAEVDG*PAPSPR
Trigger: ACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGC...ACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCGCTGAAGTGGACGGCTaGCCCGCGCCCTCACCGCGT +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSAEVDG*PAPSPR
Trigger: ACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGC...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCCCGGTTGGTTCTTGCTaGTGCTTCCTGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFPVGSC*CFLGRP
Trigger: CGGCCGCCCCAGGAAGCAGCAGCAAGAACCAACCGG...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp TTGGTAGTAGATTGTCCTGTGGATATGACATCAGGATGGGGCATATGGCATGAAGCTCCTCTCGCGGGTTaGGATCAGGAGTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LVVDCPVDMTSGWGIWHEAPLAG*DQELRA
Trigger: TGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGC...TTCATGCCATATGCCCCATCCTGATGTCATATCCACAGGACAATCTACTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp TGTGTCCCCACAAGACTCATATCCTCCACTTTTACACAACTTGAACTTGGCAGAGCTCCTCTCGCGGGTTaGGATCAGGAGTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: CVPTRLISSTFTQLELGRAPLAG*DQELRA
Trigger: TGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGC...TCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAGTCTTGTGGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCGGTGGGTGCCGGAGGTaGAGGTGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSGGCRR*RWRWRW
Trigger: CCACCTCCACCGCCACCTCCACCTCCGGCACCCACC...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp TCAGCACATCTCTGTATGTACATCTTGAGGCAAACAGCAGAAATACTTCTTTTCGGTGGGTGCCGGAGGTaGAGGTGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SAHLCMYILRQTAEILLFGGCRR*RWRWRW
Trigger: CCACCTCCACCGCCACCTCCACCTCCGGCACCCACC...GAAAAGAAGTATTTCTGCTGTTTGCCTCAAGATGTACATACAGAGATGTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp AGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCTGGTTCTCTCTTCTGAGGCGCTaGGGCGGCAGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SDSFWYCFPEMFSSWSWFSLLRR*GGRLSL
Trigger: CAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGA...GAACCAGCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAACTTGCTGCTGCTTCCTaGGGCGGCCGCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQLAAAS*GGRVLS
Trigger: AGAGAGGACGCGGCCGCCCCAGGAAGCAGCAGCAAG...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp TTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGCTTGCTGCTGCTTCCTaGGGCGGCCGCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LEERLLSCNVKLLLLQMRLAAAS*GGRVLS
Trigger: AGAGAGGACGCGGCCGCCCCAGGAAGCAGCAGCAAG...CCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR CCA 90 bp ACAAGGTGGACAGCTTTGGTGATAGACAACTGGGAGGTAAAACTCCACAGAGCCCCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TRWTALVIDNWEVKLHRAPRSAS*PFFSSG
Trigger: GCCACTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...GGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTCCACCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGTTCAGTGACTCCTTTTaGTACTGTTTCCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLEFSDSF*YCFPEM
Trigger: CATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAA...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp AATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGTTGGTGATAGACAACTaGGAGGTAAAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: NVSVIPPLARKASSGISRLVIDN*EVKLHR
Trigger: TCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAA...CCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp TACGGAGGAACCCCCGCAATTGGAATCTCTCCATGCCTTCTGCAGCATGGAAACGTGAATTGTGTCCCTTaGAATGTTAGGCGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: YGGTPAIGISPCLLQHGNVNCVP*NVRRGK
Trigger: CTTTCCCCGCCTAACATTTCAAGGGACACAATTCAC...GTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTCCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR TCA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGGCACCTTTCGGGAGATaGGGTGATAGGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMAPFGR*GDRAGD
Trigger: GTCCCCAGCCCTATCACCTCATCTCCCGAAAGGTGC...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp GTACTGCACACACCCCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGAGGGAATCAGCAGCCTaGGAAACCAGCTGGGGATTG +
Preference number: 4 (lower is better)
Translates to: VLHTPHYQIKGISSLRNQRESAA*ETSWGL
Trigger: CAATCCCCAGCTGGTTTCTCAGGCTGCTGATTCCCT...CTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGGGGTGTGTGCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR TCA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGCCACCCCACCCCAGATaGAAGTGGAAAGACCATGGC +
Preference number: 4 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQPPHPR*KWKDHG
Trigger: GCCATGGTCTTTCCACTTTCATCTGGGGTGGGGTGG...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp ACTCTTGTGAGGATGTCTCTTCAGTTTCCTCCTGAGCAGGCTTCTTCTGAACAACTCTCGGGCCACCTCTaGGTGCAAGGGAAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: TLVRMSLQFPPEQASSEQLSGHL*VQGKRV
Trigger: CACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAG...TTGTTCAGAAGAAGCCTGCTCAGGAGGAAACTGAAGAGACATCCTCACAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS-3UTR TCA 90 bp GGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCACTTTTACACAACTTaGACTTGGCAGAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GRECVCHPTTCAQGQFRDHFYTT*TWQKCS
Trigger: AGAACACTTCTGCCAAGTTCAAGTTGTGTAAAAGTG...ATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAAGCACCAAGCGCGCGCTaGCCGGGCTGGAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQAPSAR*PGWKFS
Trigger: AGAAAACTTCCAGCCCGGGCAGCGCGCGCTTGGTGC...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCTAGCTCCTGAGTCTTaGACCAAGCGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVLAPES*TKRALP
Trigger: GGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCCTAGCTCCTGAGTCTTaGACCAAGCGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSLAPES*TKRALP
Trigger: GGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAG...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR GCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATATGCTGTTGCTTAGGCTaGCGCCGCTGCCACCATCAA +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWICCCLG*RRCHHQ
Trigger: TTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCA...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAAACGCGGGCTGCGAGGGCTaGTGTTGCTTAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SIEVLRISTSLYVHLEANAGCEG*CCLGCR
Trigger: GCGGCAGCCTAAGCAACAGCAGCCCTCGCAGCCCGC...GTTTGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp GAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGAAACGCGAGCTGGCGGGCTaGGAGGGCTGCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: EERLLSCNVKLLLLQMRKRELAG*EGCCCL
Trigger: TAAGCAACAGCAGCCCTCGCAGCCCGCCAGCTCGCG...TTTCCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR GCA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATGCTGAAGTGGACGGCTaGCCCGCGCCCTCACCGCGT +
Preference number: 4 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHAEVDG*PAPSPR
Trigger: ACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGC...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATGCTGAAGTGGACGGCTaGCCCGCGCCCTCACCGCGT +
Preference number: 4 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENAEVDG*PAPSPR
Trigger: ACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGC...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTGTTGGTTCTTGCTGCTaGTTCCTGGGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVVGSCC*FLGRPR
Trigger: ACGCGGCCGCCCCAGGAAGCAGCAGCAAGAACCAAC...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp CGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGATGCTTTCTTTTGAGCTaGTTTAGAGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RGSLGPPLSAREKSAVQGCFLLS*FRGTLV
Trigger: AACAAGAGTCCCTCTAAAGCAGCTCAAAAGAAAGCA...TCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR GCA 90 bp CAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCTTCTCCAGTGGCTTCTaGTTTCTTTTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QFRDQQASFTSTGSSLATFSSGF*FLLSCF
Trigger: AAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAA...GGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp TCTTTTCAAACTGATGAACACCACATGACACCAAATCTCTGCTATTGGAAGAAAGGTGGGTGCCGGAGGTaGAGGTGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFQTDEHHMTPNLCYWKKGGCRR*RWRWRW
Trigger: CCACCTCCACCGCCACCTCCACCTCCGGCACCCACC...TTTCTTCCAATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAGTTTGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCCTTGCTGCTGCTTCCTaGGGCGGCCGCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLLAAAS*GGRVLS
Trigger: AGAGAGGACGCGGCCGCCCCAGGAAGCAGCAGCAAG...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGCCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQPRSAS*PFFSSG
Trigger: GCCACTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATCGGGCTGCTAGCTCCTaGGTCTTGCACCAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNRAASS*VLHQAR
Trigger: GCGCGCTTGGTGCAAGACTCAGGAGCTAGCAGCCCG...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp CGGCAGACTCTTGTGAGGATGTCTCTTCAGTTTCCTCCTGAGCAGGCTTCTTCTTTCGGCAGACTCTTGTaGGGATGTCTCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RQTLVRMSLQFPPEQASSFGRLL*GCLFSF
Trigger: GAAACTGAAGAGACATCCTCACAAGAGTCTGCCGAA...AGAAGAAGCCTGCTCAGGAGGAAACTGAAGAGACATCCTCACAAGAGTCTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS-3UTR GCA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAAGTTGGGATCAGGAGTTaGGGGCACCGGGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQVGIRS*GHREHF
Trigger: GAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAAC...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp GAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGAAATTAGGCTGCCGCCGCTaGCACCATCAACACCGGACG +
Preference number: 4 (lower is better)
Translates to: EERLLSCNVKLLLLQMRKLGCRR*HHQHRT
Trigger: CGTCCGGTGTTGATGGTGGCAGCGGCGGCAGCCTAA...TTTCCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR GCA 90 bp TCAGTCCAACTGATTTGTCAGTATCATGAGGATACGGTTTTGGTCTTCTCATTCTTAGGCTGCCGCCGCTaGCACCATCAACACCGGACG +
Preference number: 4 (lower is better)
Translates to: SVQLICQYHEDTVLVFSFLGCRR*HHQHRT
Trigger: CGTCCGGTGTTGATGGTGGCAGCGGCGGCAGCCTAA...GAATGAGAAGACCAAAACCGTATCCTCATGATACTGACAAATCAGTTGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp TGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACAGCGGGCTGCGAGGGCTaGTGTTGCTTAGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: WLMEFYRSSENQHISVCTAGCEG*CCLGCR
Trigger: GCGGCAGCCTAAGCAACAGCAGCCCTCGCAGCCCGC...TGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACGTTGGTTCTTGCTGCTaGTTCCTGGGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: FNWQDWLMEFYRSSENQHVGSCC*FLGRPR
Trigger: ACGCGGCCGCCCCAGGAAGCAGCAGCAAGAACCAAC...GTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp GGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGTGCTTTCTTTTGAGCTaGTTTAGAGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: GLSRATSECKGKECSSRKCFLLS*FRGTLV
Trigger: AACAAGAGTCCCTCTAAAGCAGCTCAAAAGAAAGCA...CTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR CCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCGCTCCTCTCGCGGGTTaGGATCAGGAGTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLAPLAG*DQELRA
Trigger: TGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGC...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp TTCAGTTCTCCCTTCTCGATCCTCAAATCATCACTTAAATTTCTAGATTTCTACGTCCCTGGGCTGAAGTaGACGGCTGCCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: FSSPFSILKSSLKFLDFYVPGLK*TAAPRP
Trigger: AGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGAC...GTAGAAATCTAGAAATTTAAGTGATGATTTGAGGATCGAGAAGGGAGAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CCA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGGCGGCAGGTTGTCCCTaGGCTGAAGTGGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSEAAGCP*AEVDGC
Trigger: GCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGC...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGGCGGCAGGTTGTCCCTaGGCTGAAGTGGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKAAGCP*AEVDGC
Trigger: GCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGC...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp CTCATATCCTCCACTTTTACACAACTTGAACTTGGCAGAAGTGTTCTTCAGTTGTCTCTTCTGAGGCGCTaGGGCGGCAGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LISSTFTQLELGRSVLQLSLLRR*GGRLSL
Trigger: CAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGA...CAACTGAAGAACACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp GACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTCTTGCTGCTGCTTCCTaGGGCGGCCGCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: DWLMEFYRSSENQHISVCLAAAS*GGRVLS
Trigger: AGAGAGGACGCGGCCGCCCCAGGAAGCAGCAGCAAG...ACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATACCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIPRSAS*PFFSSG
Trigger: GCCACTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp CACCCTCTACTCTCTAAGCTGTCCCCGCAGGCATGGCTCTGCATGTGCCTAGAGTTTTCTTCTTGGAGCTaGTTCTTGGTAGTAGATTGT +
Preference number: 4 (lower is better)
Translates to: HPLLSKLSPQAWLCMCLEFSSWS*FLVVDC
Trigger: ACAATCTACTACCAAGAACCAGCTCCAAGAAGAAAA...CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAGCTTAGAGAGTAGAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp GGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAAAAGTGGAAAGACCATaGCAATACAGAATAAGTGGT +
Preference number: 4 (lower is better)
Translates to: GMCLSSHHLRARPVPGSAKVERP*QYRISG
Trigger: ACCACTTATTCTGTATTGCCATGGTCTTTCCACTTT...TGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS-3UTR TCA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTACGGGCTGCTAGCTCCTaGGTCTTGCACCAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVRAASS*VLHQAR
Trigger: GCGCGCTTGGTGCAAGACTCAGGAGCTAGCAGCCCG...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACGTGAATTGTGTCCCTTaGAATGTTAGGCGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SYKGAIWGSSETTSWDADVNCVP*NVRRGK
Trigger: CTTTCCCCGCCTAACATTTCAAGGGACACAATTCAC...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp TTGGTAGTAGATTGTCCTGTGGATATGACATCAGGATGGGGCATATGGCATGAAAAGGAAGAGAGGCTTTaGGGTCGCAGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVVDCPVDMTSGWGIWHEKEERL*GRRGSS
Trigger: AGAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTT...TTCATGCCATATGCCCCATCCTGATGTCATATCCACAGGACAATCTACTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR TCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCGCACCTTTCGGGAGATaGGGTGATAGGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLAPFGR*GDRAGD
Trigger: GTCCCCAGCCCTATCACCTCATCTCCCGAAAGGTGC...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCAATAAACAGAATCGCTaGAGGGTGGGGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCNKQNR*RVGPCW
Trigger: CCAGCATGGCCCCACCCTTCAGCGATTCTGTTTATT...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCCCATCTGTAGCTAAGTaGCCGGCAAGACCACAAGGC +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFPSVAK*PARPQG
Trigger: GCCTTGTGGTCTTGCCGGTCACTTAGCTACAGATGG...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TCAGCACATCTCTGTATGTACATCTTGAGGCAAACAGCAGAAATACTTCTTTTCGCACCAAGCGCGCGCTaGCCGGGCTGGAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SAHLCMYILRQTAEILLFAPSAR*PGWKFS
Trigger: AGAAAACTTCCAGCCCGGGCAGCGCGCGCTTGGTGC...GAAAAGAAGTATTTCTGCTGTTTGCCTCAAGATGTACATACAGAGATGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCGCACCAAGCGCGCGCTaGCCGGGCTGGAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSAPSAR*PGWKFS
Trigger: AGAAAACTTCCAGCCCGGGCAGCGCGCGCTTGGTGC...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGCTAGCTCCTGAGTCTTaGACCAAGCGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSELAPES*TKRALP
Trigger: GGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAG...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TCAGCACATCTCTGTATGTACATCTTGAGGCAAACAGCAGAAATACTTCTTTTCCTAGCTCCTGAGTCTTaGACCAAGCGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SAHLCMYILRQTAEILLFLAPES*TKRALP
Trigger: GGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAG...GAAAAGAAGTATTTCTGCTGTTTGCCTCAAGATGTACATACAGAGATGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCCGGACGTCCAGCGGCTaGCAAAAAGAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFRTSSG*QKEKRG
Trigger: TCCCCTCTTCTCTTTTTGGCAGCCGCTGGACGTCCG...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp TTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGCGGACGTCCAGCGGCTaGCAAAAAGAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LEERLLSCNVKLLLLQMRRTSSG*QKEKRG
Trigger: TCCCCTCTTCTCTTTTTGGCAGCCGCTGGACGTCCG...CCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCTGCTGTTGCTTAGGCTaGCGCCGCTGCCACCATCAA +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFCCCLG*RRCHHQ
Trigger: TTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCA...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp TTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGTGCTGTTGCTTAGGCTaGCGCCGCTGCCACCATCAA +
Preference number: 4 (lower is better)
Translates to: LEERLLSCNVKLLLLQMRCCCLG*RRCHHQ
Trigger: TTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCA...CCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR GCA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATATGCGAGGGCTGCTGTTaGTTAGGCTGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KATHKAHRCNGQFLKVKICEGCC*LGCRRC
Trigger: GCAGCGGCGGCAGCCTAAGCAACAGCAGCCCTCGCA...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp TGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATGCGAGGGCTGCTGTTaGTTAGGCTGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WLMEFYRSSENQHISVCTCEGCC*LGCRRC
Trigger: GCAGCGGCGGCAGCCTAAGCAACAGCAGCCCTCGCA...TGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTATGCGAGGGCTGCTGTTaGTTAGGCTGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVCEGCC*LGCRRC
Trigger: GCAGCGGCGGCAGCCTAAGCAACAGCAGCCCTCGCA...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp AATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCATGCGAGGGCTGCTGTTaGTTAGGCTGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NSIEVLRISTSLYVHLEACEGCC*LGCRRC
Trigger: GCAGCGGCGGCAGCCTAAGCAACAGCAGCCCTCGCA...TGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACATGCGAGGGCTGCTGTTaGTTAGGCTGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTCEGCC*LGCRRC
Trigger: GCAGCGGCGGCAGCCTAAGCAACAGCAGCCCTCGCA...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCGCGAGCTGGCGGGCTaGGAGGGCTGCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENRELAG*EGCCCL
Trigger: TAAGCAACAGCAGCCCTCGCAGCCCGCCAGCTCGCG...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATCGCGAGCTGGCGGGCTaGGAGGGCTGCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDRELAG*EGCCCL
Trigger: TAAGCAACAGCAGCCCTCGCAGCCCGCCAGCTCGCG...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACACGCGAGCTGGCGGGCTaGGAGGGCTGCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTRELAG*EGCCCL
Trigger: TAAGCAACAGCAGCCCTCGCAGCCCGCCAGCTCGCG...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp AATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCACCGGTTGGTTCTTGCTaGTGCTTCCTGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: NSIEVLRISTSLYVHLEAPVGSC*CFLGRP
Trigger: CGGCCGCCCCAGGAAGCAGCAGCAAGAACCAACCGG...TGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAATTCTCCAGTGGCTTCTaGTTTCTTTTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLGPPLSAREKSAVQGREFSSGF*FLLSCF
Trigger: AAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAA...TTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR GCA 90 bp CCCCCTAGTCCTCTTCGGCAGACTCTTGTGAGGATGTCTCTTCAGTTTCCTCCTAGAATAAGTGGTCACTaGAGTGTCTTCTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: PPSPLRQTLVRMSLQFPPRISGH*SVFSLQ
Trigger: TTGAAGGGAGAAGACACTGCAGTGACCACTTATTCT...AGGAGGAAACTGAAGAGACATCCTCACAAGAGTCTGCCGAAGAGGACTAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS-3UTR GCA 90 bp TCAGTCCAACTGATTTGTCAGTATCATGAGGATACGGTTTTGGTCTTCTCATTCTGTCATCCCACCACTTaGGCGCAAGGCCAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SVQLICQYHEDTVLVFSFCHPTT*AQGQFR
Trigger: CCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACA...GAATGAGAAGACCAAAACCGTATCCTCATGATACTGACAAATCAGTTGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATAGCGGCAGGTTGTCCCTaGGCTGAAGTGGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: KATHKAHRCNGQFLKVKIAAGCP*AEVDGC
Trigger: GCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGC...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTAGCGGCAGGTTGTCCCTaGGCTGAAGTGGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVAAGCP*AEVDGC
Trigger: GCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGC...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCTCTTCTGAGGCGCTaGGGCGGCAGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNSLLRR*GGRLSL
Trigger: CAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGA...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGTCTCTTCTGAGGCGCTaGGGCGGCAGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSESLLRR*GGRLSL
Trigger: CAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGA...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp AGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCTGGTTCAGAGGGCTCACCGGTTaGTTCTTGCTGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SDSFWYCFPEMFSSWSWFRGLTG*FLLLLP
Trigger: AGGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCT...GAACCAGCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp AGTTTCCTCCTGAGCAGGCTTCTTCTGAACAACTTGTTGTGGCGGGGCTCTCTCGCAATACAGAATAAGTaGTCACTGCAGTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFLLSRLLLNNLLWRGSLAIQNK*SLQCLL
Trigger: GAGAAGACACTGCAGTGACCACTTATTCTGTATTGC...GAGAGAGCCCCGCCACAACAAGTTGTTCAGAAGAAGCCTGCTCAGGAGGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS-3UTR CCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCGGTGCTCCAGGAATATaGGGCAAGAGACGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCGAPGI*GKRRRA
Trigger: AGCTCTACGTCTCTTGCCCCATATTCCTGGAGCACC...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 72 bp CAGGTTTATACCTGTCCTAATTGCCAGAGGCATCGTTaGCCAGGGCTGTACAACAATGGGGAAAGTGGATTG +
Preference number: 4 (lower is better)
Translates to: QVYTCPNCQRHR*PGLYNNGESGL
Trigger: CAATCCACTTTCCCCATTGTTGTACAGCCCTGGCAAACGATGCCTCTGGCAATTAGGACAGGTATAAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAAAAGGAAGAGAGGCTTTaGGGTCGCAGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQKEERL*GRRGSS
Trigger: AGAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTT...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGGCACCTTTCGGGAGATaGGGTGATAGGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKAPFGR*GDRAGD
Trigger: GTCCCCAGCCCTATCACCTCATCTCCCGAAAGGTGC...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGGGTGATTCACAACAGTaGGCGATCTGCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMGDSQQ*AICQSQ
Trigger: CTGAGACTGGCAGATCGCTCACTGTTGTGAATCACC...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATAGGTGGGTGGCTCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: KATHKAHRCNGQFLKVKIGGWLT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGAGCCACCCACC...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR TCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCCCTGCCAAGAACCGCTaGCTTCATCCTGCCAATATT +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCPAKNR*LHPANI
Trigger: AATATTGGCAGGATGAAGTCAGCGGTTCTTGGCAGG...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTATTAGGCTGCCGCCGCTaGCACCATCAACACCGGACG +
Preference number: 4 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVLGCRR*HHQHRT
Trigger: CGTCCGGTGTTGATGGTGGCAGCGGCGGCAGCCTAA...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCTGCTGTTGCTTAGGCTaGCGCCGCTGCCACCATCAA +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLCCCLG*RRCHHQ
Trigger: TTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCA...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp CTCATATCCTCCACTTTTACACAACTTGAACTTGGCAGAAGTGTTCTTCAGTTGTGCTGTTGCTTAGGCTaGCGCCGCTGCCACCATCAA +
Preference number: 4 (lower is better)
Translates to: LISSTFTQLELGRSVLQLCCCLG*RRCHHQ
Trigger: TTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCA...CAACTGAAGAACACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACCCACACTGTGATTTCTaGAAAAAGGTGGATCCCTGT +
Preference number: 4 (lower is better)
Translates to: SYKGAIWGSSETTSWDADPHCDF*KKVDPC
Trigger: ACAGGGATCCACCTTTTTGCAGAAATCACAGTGTGG...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354636.7
CDS-3UTR GCA 90 bp TGTGTCCCCACAAGACTCATATCCTCCACTTTTACACAACTTGAACTTGGCAGACCAAAGTTCTTCTCCTaGAGGCAGCCTTACGGCTCT +
Preference number: 4 (lower is better)
Translates to: CVPTRLISSTFTQLELGRPKFFS*RQPYGS
Trigger: AGAGCCGTAAGGCTGCCTGCAGGAGAAGAACTTTGG...TCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAGTCTTGTGGGGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGGCGCGCTGCCCGGGCTaGAAGTTTTCTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSEARCPG*KFSEFL
Trigger: CAGGAACTCAGAAAACTTCCAGCCCGGGCAGCGCGC...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATGCGCGCTGCCCGGGCTaGAAGTTTTCTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNARCPG*KFSEFL
Trigger: CAGGAACTCAGAAAACTTCCAGCCCGGGCAGCGCGC...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTGAAAGCAAAGGAGGATaGGGAGACTCCGCCGGGATA +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVESKGG*GDSAGI
Trigger: TATCCCGGCGGAGTCTCCCCATCCTCCTTTGCTTTC...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTAGCTCCTCTCGCGGGTTaGGATCAGGAGTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVAPLAG*DQELRA
Trigger: TGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGC...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp AATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGGCTCCTCTCGCGGGTTaGGATCAGGAGTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: NFNWQDWLMEFYRSSENQAPLAG*DQELRA
Trigger: TGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGC...CTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp AATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGTCTCTTCTGAGGCGCTaGGGCGGCAGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: NFNWQDWLMEFYRSSENQSLLRR*GGRLSL
Trigger: CAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGA...CTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATTCTCTTCTGAGGCGCTaGGGCGGCAGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHSLLRR*GGRLSL
Trigger: CAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGA...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACATCTCTTCTGAGGCGCTaGGGCGGCAGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTSLLRR*GGRLSL
Trigger: CAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGA...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp CTGCTATTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGAGAGGGCTCACCGGTTaGTTCTTGCTGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLLEERLLSCNVKLLLLQRGLTG*FLLLLP
Trigger: AGGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCT...CTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAATAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR CCA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTTTTTGCTGCCTTTaGGTCTTCCCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQCFCCL*VFPWVS
Trigger: AGAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACA...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403681.7
ENST00000539662.1
CDS-3UTR CCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCTGTTTTTGCTGCCTTTaGGTCTTCCCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCCFCCL*VFPWVS
Trigger: AGAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACA...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAACCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQPRSAS*PFFSSG
Trigger: GCCACTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCCCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSPRSAS*PFFSSG
Trigger: GCCACTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCCTGTCCCCGCAGGCATaGCTCTGCATGTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSLSPQA*LCMCLE
Trigger: CTCTAGGCACATGCAGAGCCATGCCTGCGGGGACAG...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGGTAGAAATCGAACGTTaGCGCCCCCTAGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMVEIER*RPLVLF
Trigger: GAAGAGGACTAGGGGGCGCCAACGTTCGATTTCTAC...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp TGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACAGCACCTTTCGGGAGATaGGGTGATAGGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: WLMEFYRSSENQHISVCTAPFGR*GDRAGD
Trigger: GTCCCCAGCCCTATCACCTCATCTCCCGAAAGGTGC...TGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTTCGGCAGACTCTTGTaGGGATGTCTCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQFGRLL*GCLFSF
Trigger: GAAACTGAAGAGACATCCTCACAAGAGTCTGCCGAA...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403681.7
ENST00000539662.1
CDS-3UTR TCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATACCTGTGATGCAAATGTaGACTCTGCCTCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIPVMQM*TLPHPL
Trigger: CAAAGGATGAGGCAGAGTTCACATTTGCATCACAGG...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATACCATTCTTGAAGTTCTaGGGAGACTTCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIPFLKF*GDFSIG
Trigger: CCCAATGCTGAAGTCTCCTCAGAACTTCAAGAATGG...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCAGACGAGTGTTAGAGTaGGAATGCTTTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCRRVLE*ECFPLS
Trigger: GGAAAGGGGAAAGCATTCTCACTCTAACACTCGTCT...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATAGTTGGGATCAGGAGTTaGGGGCACCGGGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: KATHKAHRCNGQFLKVKIVGIRS*GHREHF
Trigger: GAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAAC...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp AATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAGTTGGGATCAGGAGTTaGGGGCACCGGGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: NSIEVLRISTSLYVHLEAVGIRS*GHREHF
Trigger: GAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAAC...TGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCCGGACGTCCAGCGGCTaGCAAAAAGAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSRTSSG*QKEKRG
Trigger: TCCCCTCTTCTCTTTTTGGCAGCCGCTGGACGTCCG...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGGACTCTTGTTTTTGCTaGCTTTGGGTCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMDSCFC*LWVFPW
Trigger: CCAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTC...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCGACTCTTGTTTTTGCTaGCTTTGGGTCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFDSCFC*LWVFPW
Trigger: CCAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTC...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATGCGCGCTGCCCGGGCTaGAAGTTTTCTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENARCPG*KFSEFL
Trigger: CAGGAACTCAGAAAACTTCCAGCCCGGGCAGCGCGC...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp TCCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTGGATGGAGGATTTTATCCAGCTGGGGATTGCTaGGATCTTTCTAGTGACCAA +
Preference number: 4 (lower is better)
Translates to: SSRSTSCITKQHLDGGFYPAGDC*DLSSDQ
Trigger: TTGGTCACTAGAAAGATCCCAGCAATCCCCAGCTGG...ATAAAATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCCAACAATGGGGAAAGTaGATTGAAAGGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCQQWGK*IERVES
Trigger: GCTCTCCACCCTTTCAATCCACTTTCCCCATTGTTG...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 72 bp GGTGTTCTAAACAGAGGATTCACTACAGGGAGTGGGTaGGGGTGGTATTTGAGGTGTACACAGTGTTACACA +
Preference number: 4 (lower is better)
Translates to: GVLNRGFTTGSG*GWYLRCTQCYT
Trigger: TGTGTAACACTGTGTACACCTCAAATACCACCCCAACCCACTCCCTGTAGTGAATCCTCTGTTTAGAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGGTGAATTGTGTCCCTTaGAATGTTAGGCGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMVNCVP*NVRRGK
Trigger: CTTTCCCCGCCTAACATTTCAAGGGACACAATTCAC...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATAAGGAAGAGAGGCTTTaGGGTCGCAGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNKEERL*GRRGSS
Trigger: AGAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTT...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp GTCCCCACAAGACTCATATCCTCCACTTTTACACAACTTGAACTTGGCAGAAGTGCTTCTGCTTTCTTTTaGGCTGCTTTAGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: VPTRLISSTFTQLELGRSASAFF*AALEGL
Trigger: GAGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGC...ACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAGTCTTGTGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAAACAAGGGCCATTCTTaGAGTTCTGAGGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWINKGHS*SSEETS
Trigger: TGAAGTCTCCTCAGAACTTCAAGAATGGCCCTTGTT...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCATGGGGAAAGTGGATTaGAAGGGTGGAGAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFMGKVD*KGGELL
Trigger: TAACAGCTCTCCACCCTTTCAATCCACTTTCCCCAT...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAATAATCAAGGCTTACTaGGATTTCTTTGCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIIIKAY*DFFARV
Trigger: CACCCGGGCAAAGAAATCTCAGTAAGCCTTGATTAT...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TCTTTTCAAACTGATGAACACCACATGACACCAAATCTCTGCTATTGGAAGAAACGGACGTCCAGCGGCTaGCAAAAAGAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SFQTDEHHMTPNLCYWKKRTSSG*QKEKRG
Trigger: TCCCCTCTTCTCTTTTTGGCAGCCGCTGGACGTCCG...TTTCTTCCAATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAGTTTGAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACACGGACGTCCAGCGGCTaGCAAAAAGAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTRTSSG*QKEKRG
Trigger: TCCCCTCTTCTCTTTTTGGCAGCCGCTGGACGTCCG...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATGCTGTTGCTTAGGCTaGCGCCGCTGCCACCATCAA +
Preference number: 4 (lower is better)
Translates to: WLMEFYRSSENQHISVCTCCCLG*RRCHHQ
Trigger: TTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCA...TGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCGACTCTTGTTTTTGCTaGCTTTGGGTCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSDSCFC*LWVFPW
Trigger: CCAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTC...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR GCA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACAACTACATCTTGGGATaGAGACTTCAGTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: SYKGAIWGSSETTSWDADNYILG*RLQLET
Trigger: TGTTTCCAACTGAAGTCTGCATCCCAAGATGTAGTT...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCATAGTGAGGACAAGGTaGTCCAGGAATATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFIVRTR*SRNMGQ
Trigger: TTGCCCCATATTCCTGGAGCACCTTGTCCTCACTAT...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATACCTCAGAATAAACTCTaGTGCTTTGTACCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIPQNKL*CFVPQV
Trigger: AACCTGGGGTACAAAGCAGCAGAGTTTATTCTGAGG...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAGCAAACACAAACCCCTaGAACAGGGTGGTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQANTNP*NRVVLH
Trigger: GTGAAGGACCACCCTGTTGCAGGGGTTTGTGTTTGC...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATGAAAGCAAAGGAGGATaGGGAGACTCCGCCGGGATA +
Preference number: 4 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNESKGG*GDSAGI
Trigger: TATCCCGGCGGAGTCTCCCCATCCTCCTTTGCTTTC...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCAGAGGGCTCACCGGTTaGTTCTTGCTGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSRGLTG*FLLLLP
Trigger: AGGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCT...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGAGTGAAACTACATCTTaGGATGCAGACTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQSETTS*DADFSW
Trigger: CCAACTGAAGTCTGCATCCCAAGATGTAGTTTCACT...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAAGGGCTGTACAACAATaGGGAAAGTGGATTGAAAGG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIRAVQQ*GKWIER
Trigger: CCTTTCAATCCACTTTCCCCATTGTTGTACAGCCCT...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAAATGTGACCACCACTTaGGGAAACCCTGAAAAACGT +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWINVTTT*GNPEKR
Trigger: ACGTTTTTCAGGGTTTCCCCAAGTGGTGGTCACATT...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 72 bp ATCACTCGGTGCACCATGTTTGGCCAACATGAGCAATaGCTTCCATTTTATGAGCTGGCCAATGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: ITRCTMFGQHEQ*LPFYELANEVS
Trigger: AGAAACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACATGGTGCACCGAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR CAA 72 bp GGGCAAATCTGGAACAGGGTCTGTAAGATAGCCAGATaGATCCTTGAAGATCAACTCAATCCACTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GQIWNRVCKIAR*ILEDQLNPLVA
Trigger: AGCCACAAGTGGATTGAGTTGATCTTCAAGGATCAATCTGGCTATCTTACAGACCCTGTTCCAGATTTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp TCCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTGGATGGAGGATTTTATGGAAGAGACTTGGAGTaGATTGTGTCCCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: SSRSTSCITKQHLDGGFYGRDLE*IVSLEM
Trigger: CATTTCAAGGGACACAATTCACTCCAAGTCTCTTCC...ATAAAATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR TCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATAAGGAAGAGAGGCTTTaGGGTCGCAGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENKEERL*GRRGSS
Trigger: AGAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTT...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAAAGGAAGAGAGGCTTTaGGGTCGCAGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTKEERL*GRRGSS
Trigger: AGAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTT...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCGCTTCTGCTTTCTTTTaGGCTGCTTTAGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFASAFF*AALEGL
Trigger: GAGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGC...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403681.7
ENST00000539662.1
CDS-3UTR TCA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCGCTTCTGCTTTCTTTTaGGCTGCTTTAGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSASAFF*AALEGL
Trigger: GAGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGC...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR TCA 90 bp TTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGGCTTCTGCTTTCTTTTaGGCTGCTTTAGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: LEERLLSCNVKLLLLQMRASAFF*AALEGL
Trigger: GAGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGC...CCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR TCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTAGATCCAACTGCTGCTaGGGTAGAAATCGAACGTTG +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVRSNCC*GRNRTL
Trigger: CAACGTTCGATTTCTACCTCAGCAGCAGTTGGATCT...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCCGACGTCACAAGTGTaGCACGTTTCTTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVPTSQV*HVSCLH
Trigger: ATGCAAACAAGAAACGTGTCACACTTGTGACGTCGG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCGGTTGGGGTGGTATTTaGGGTGTACACAGTGTTACA +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFGWGGI*GVHSVT
Trigger: TGTAACACTGTGTACACCTCAAATACCACCCCAACC...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCGTGTCCCATACACATTaGCATTCTGTGGTCATTTGC +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFVSHTH*HSVVIC
Trigger: GCAAATGACCACAGAATGTCAATGTGTATGGGACAC...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCATCCCCTTGATAACCTaGGGCATTCCACTCATTCAT +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFIPLIT*GIPLIH
Trigger: ATGAATGAGTGGAATGCCTCAGGTTATCAAGGGGAT...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATATTGAGAACGAGATGCTaGCTGCAATTCATCAACTTG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWILRTRC*LQFINL
Trigger: CAAGTTGATGAATTGCAGTCAGCATCTCGTTCTCAA...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAGCAAGACCACAAGGCTaGGTTTTTCTATTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIARPQG*VFLFLC
Trigger: ACAGAGAAATAGAAAAACTCAGCCTTGTGGTCTTGC...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCTCTCTTCAGCAGCAATaGCCAGGAACCAGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFSLQQQ*PGTSFS
Trigger: TGAAAAACTGGTTCCTGGTCATTGCTGCTGAAGAGA...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp CCTGTGGATATGACATCAGGATGGGGCATATGGCATGAATACCTCAGAAGAGATTTCTCCAGTGGCTTCTaGTTTCTTTTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PVDMTSGWGIWHEYLRRDFSSGF*FLLSCF
Trigger: AAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAA...ATCTCTTCTGAGGTATTCATGCCATATGCCCCATCCTGATGTCATATCCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR GCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCTTCTCCAGTGGCTTCTaGTTTCTTTTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCFSSGF*FLLSCF
Trigger: AAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAA...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TCCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTGGATGGAGGATTTTATTCCAGAAGCACTAGCTaGATCACTAAGCAACATCTG +
Preference number: 4 (lower is better)
Translates to: SSRSTSCITKQHLDGGFYSRSTS*ITKQHL
Trigger: CAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGA...ATAAAATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR GCA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGAAAAGCAGGGCTTGTTaGATCTCACCTACAAAGCTT +
Preference number: 4 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQKSRAC*ISPTKL
Trigger: AAGCTTTGTAGGTGAGATGCAACAAGCCCTGCTTTT...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCCTGGGAGGTGGAGGTTaGAATGAGCCGAGATTGTAC +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSLGGGG*NEPRLY
Trigger: GTACAATCTCGGCTCATTGCAACCTCCACCTCCCAG...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp TCTTTTCAAACTGATGAACACCACATGACACCAAATCTCTGCTATTGGAAGAAAGAAAGCAAAGGAGGATaGGGAGACTCCGCCGGGATA +
Preference number: 4 (lower is better)
Translates to: SFQTDEHHMTPNLCYWKKESKGG*GDSAGI
Trigger: TATCCCGGCGGAGTCTCCCCATCCTCCTTTGCTTTC...TTTCTTCCAATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAGTTTGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATGAAAGCAAAGGAGGATaGGGAGACTCCGCCGGGATA +
Preference number: 4 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENESKGG*GDSAGI
Trigger: TATCCCGGCGGAGTCTCCCCATCCTCCTTTGCTTTC...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCAGATTGAAAGTGCCTTaGGCAGTCGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSRLKVP*AVGKQR
Trigger: CCTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCT...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATAGAGGGCTCACCGGTTaGTTCTTGCTGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDRGLTG*FLLLLP
Trigger: AGGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCT...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAAGAGGGCTCACCGGTTaGTTCTTGCTGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTRGLTG*FLLLLP
Trigger: AGGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCT...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCTGTTTTTGCTGCCTTTaGGTCTTCCCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLCFCCL*VFPWVS
Trigger: AGAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACA...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp AATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: NFNWQDWLMEFYRSSENQPRSAS*PFFSSG
Trigger: GCCACTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...CTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp AATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCACCTAGGTCTGCCTCTTaGCCGTTTTTCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: NSIEVLRISTSLYVHLEAPRSAS*PFFSSG
Trigger: GCCACTGGAGAAAAACGGCCAAGAGGCAGACCTAGG...TGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp GCTATCCTGGACTCCTCCAATGACAATTCAGTGACTCCTTTTGGTACTGTTTCCAGTGAAACTACATCTTaGGATGCAGACTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: AILDSSNDNSVTPFGTVSSETTS*DADFSW
Trigger: CCAACTGAAGTCTGCATCCCAAGATGTAGTTTCACT...GGAAACAGTACCAAAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp GCTATCCTGGACTCCTCCAATGACAATTCAGTGACTCCTTTTGGTACTGTTTCCGATATGACATCAGGATaGGGCATATGGCATGAATAC +
Preference number: 4 (lower is better)
Translates to: AILDSSNDNSVTPFGTVSDMTSG*GIWHEY
Trigger: GTATTCATGCCATATGCCCCATCCTGATGTCATATC...GGAAACAGTACCAAAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCCATGGGAAAGCCATCTaGGAGGGTATTTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCHGKAI*EGILKE
Trigger: TTCTTTCAAAATACCCTCCCAGATGGCTTTCCCATG...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGATCCAGATTGCCTCATaGGAAAGCCATCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKIQIAS*ESHLGG
Trigger: CCCTCCCAGATGGCTTTCCCATGAGGCAATCTGGAT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 72 bp CTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTaGGCCAACATGAGCAATTGCTTCCATTTTATGAGC +
Preference number: 4 (lower is better)
Translates to: LYQRWKSLGAPC*ANMSNCFHFMS
Trigger: GCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp TTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGGGAAGAGACTTGGAGTaGATTGTGTCCCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: LEERLLSCNVKLLLLQMRGRDLE*IVSLEM
Trigger: CATTTCAAGGGACACAATTCACTCCAAGTCTCTTCC...CCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR TCA 90 bp TTCAGTTCTCCCTTCTCGATCCTCAAATCATCACTTAAATTTCTAGATTTCTACAAGGAAGAGAGGCTTTaGGGTCGCAGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSSPFSILKSSLKFLDFYKEERL*GRRGSS
Trigger: AGAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTT...GTAGAAATCTAGAAATTTAAGTGATGATTTGAGGATCGAGAAGGGAGAACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR TCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGGCCAGTGTTTTGAAATaGTCTAAAAGACACCTGATA +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQASVLK*SKRHLI
Trigger: TATCAGGTGTCTTTTAGATCATTTCAAAACACTGGC...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp ACTTGGCAGAAGTGTTCTTCAGTTGATTCATGTGTGCTCAGTCCAACTGATTTGTGTGCTCAGTCCAACTaGTTTGTCAGTATCATGAGG +
Preference number: 4 (lower is better)
Translates to: TWQKCSSVDSCVLSPTDLCAQSN*FVSIMR
Trigger: CCTCATGATACTGACAAATCAGTTGGACTGAGCACA...CAAATCAGTTGGACTGAGCACACATGAATCAACTGAAGAACACTTCTGCCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAACAGGCAAGGCAACATTaGCCTAAGAAAACAGGATGC +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQQARQH*PKKTGC
Trigger: GCATCCTGTTTTCTTAGGTCAATGTTGCCTTGCCTG...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCCCTCAAAGTGCTGTTaGAGGAAGGATATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKPSKCC*RKDMRL
Trigger: CAGCCTCATATCCTTCCTTCAACAGCACTTTGAGGG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAAACGACTCTTGTTTTTGCTaGCTTTGGGTCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SIEVLRISTSLYVHLEANDSCFC*LWVFPW
Trigger: CCAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTC...GTTTGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp GCTATCCTGGACTCCTCCAATGACAATTCAGTGACTCCTTTTGGTACTGTTTCCTGCTTTCTTTTGAGCTaGTTTAGAGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: AILDSSNDNSVTPFGTVSCFLLS*FRGTLV
Trigger: AACAAGAGTCCCTCTAAAGCAGCTCAAAAGAAAGCA...GGAAACAGTACCAAAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR GCA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTCTAGTTTCCTTAAATaGTCTGAGGCTGACAAGTGT +
Preference number: 4 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQSSFLK*SEADKC
Trigger: ACACTTGTCAGCCTCAGAGCATTTAAGGAAACTAGA...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCATGGAAATCACTCGGTaGACCATGTTTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFMEITR*TMFGQH
Trigger: ATGTTGGCCAAACATGGTGCACCGAGTGATTTCCAT...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCCAGAATAAACTCTGCTaGTTTGTACCCCAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFQNKLC*FVPQVQ
Trigger: TTGAACCTGGGGTACAAAGCAGCAGAGTTTATTCTG...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATATTTCTTTGCCCGGGTaGACACCACCCACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYISLPG*TPPTED
Trigger: ATCTTCTGTGGGTGGTGTGCACCCGGGCAAAGAAAT...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGTTACTGAGATTTCTTTaGCCGGGTGCACACCACCCA +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKLLRFL*PGAHHP
Trigger: TGGGTGGTGTGCACCCGGGCAAAGAAATCTCAGTAA...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCGAACGAGATGCTGACTaGAATTCATCAACTTGCTTG +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFERDAD*NSSTCL
Trigger: CAAGCAAGTTGATGAATTGCAGTCAGCATCTCGTTC...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATATATACAACAAAACCGTaGAACTTAGGGCAACCTTTG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIYTTKP*NLGQPL
Trigger: CAAAGGTTGCCCTAAGTTGCACGGTTTTGTTGTATA...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAGATTGAAAGTGCCTTaGGCAGTCGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLRLKVP*AVGKQR
Trigger: CCTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCT...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp TTCAGTTCTCCCTTCTCGATCCTCAAATCATCACTTAAATTTCTAGATTTCTACAGAGGGCTCACCGGTTaGTTCTTGCTGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FSSPFSILKSSLKFLDFYRGLTG*FLLLLP
Trigger: AGGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCT...GTAGAAATCTAGAAATTTAAGTGATGATTTGAGGATCGAGAAGGGAGAACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CCA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGTGTTTTTGCTGCCTTTaGGTCTTCCCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSECFCCL*VFPWVS
Trigger: AGAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACA...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTGTTTTTGCTGCCTTTaGGTCTTCCCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNCFCCL*VFPWVS
Trigger: AGAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACA...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGTTTTCTTCTTGGAGCTaGTTCTTGGTAGTAGATTGT +
Preference number: 4 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQFSSWS*FLVVDC
Trigger: ACAATCTACTACCAAGAACCAGCTCCAAGAAGAAAA...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp TTGGTAGTAGATTGTCCTGTGGATATGACATCAGGATGGGGCATATGGCATGAACATGAAGAGCTATCCTaGACTCCTCCAATGACAATT +
Preference number: 4 (lower is better)
Translates to: LVVDCPVDMTSGWGIWHEHEELS*TPPMTI
Trigger: AATTGTCATTGGAGGAGTCCAGGATAGCTCTTCATG...TTCATGCCATATGCCCCATCCTGATGTCATATCCACAGGACAATCTACTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCCTGTACGAGAGTAACTaGAGTTCAGCCCACCCTCTA +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSLYESN*SSAHPL
Trigger: TAGAGGGTGGGCTGAACTCCAGTTACTCTCGTACAG...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354636.7
CDS-3UTR CCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATGGGAGTGGGTTGGGGTaGTATTTGAGGTGTACACAG +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDGSGLG*YLRCTQ
Trigger: CTGTGTACACCTCAAATACCACCCCAACCCACTCCC...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAGCAGCTGATGACACCTaGTGGATTTCGCAAACACAA +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQAADDT*WISQTQ
Trigger: TTGTGTTTGCGAAATCCACCAGGTGTCATCAGCTGC...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 72 bp TGTTTCCCAGAGATGTTTTCTTCTTGGAGCTGGTTCTaGGTAGTAGATTGTCCTGTGGATATGACATCAGGA +
Preference number: 4 (lower is better)
Translates to: CFPEMFSSWSWF*VVDCPVDMTSG
Trigger: TCCTGATGTCATATCCACAGGACAATCTACTACCAAGAACCAGCTCCAAGAAGAAAACATCTCTGGGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
3UTR CAA 72 bp CTCATTCATCTGTATCCCCCGTGTGTCCCATACACATaGACATTCTGTGGTCATTTGCTCAACAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: LIHLYPPCVPYT*TFCGHLLNKCS
Trigger: TGAACATTTGTTGAGCAAATGACCACAGAATGTCAATGTGTATGGGACACACGGGGGATACAGATGAATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCGGAAGAGACTTGGAGTaGATTGTGTCCCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLGRDLE*IVSLEM
Trigger: CATTTCAAGGGACACAATTCACTCCAAGTCTCTTCC...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp TCAGTCCAACTGATTTGTCAGTATCATGAGGATACGGTTTTGGTCTTCTCATTCGGAAGAGACTTGGAGTaGATTGTGTCCCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: SVQLICQYHEDTVLVFSFGRDLE*IVSLEM
Trigger: CATTTCAAGGGACACAATTCACTCCAAGTCTCTTCC...GAATGAGAAGACCAAAACCGTATCCTCATGATACTGACAAATCAGTTGGACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATGCTTCTGCTTTCTTTTaGGCTGCTTTAGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNASAFF*AALEGL
Trigger: GAGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGC...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp TCAGCACATCTCTGTATGTACATCTTGAGGCAAACAGCAGAAATACTTCTTTTCGCTTCTGCTTTCTTTTaGGCTGCTTTAGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: SAHLCMYILRQTAEILLFASAFF*AALEGL
Trigger: GAGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGC...GAAAAGAAGTATTTCTGCTGTTTGCCTCAAGATGTACATACAGAGATGTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATGCTTCTGCTTTCTTTTaGGCTGCTTTAGAGGGACTC +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYASAFF*AALEGL
Trigger: GAGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGC...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATCCTGGACTCCTCCAATaGCAATTCAGTGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNPGLLQ*QFSDSF
Trigger: AAAGGAGTCACTGAATTGTCATTGGAGGAGTCCAGG...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR TCA 90 bp TTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGCTGATGAACACCACATaGCACCAAATCTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: LEERLLSCNVKLLLLQMRLMNTT*HQISAI
Trigger: AATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAG...CCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR TCA 90 bp GACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACTAAACTAGGTATGTaGCGAGCTCCTTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: DWLMEFYRSSENQHISVCTKLGM*RAPFLG
Trigger: GCCTAGGAAAGGAGCTCGTCACATACCTAGTTTAGT...ACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGACTAAACTAGGTATGTaGCGAGCTCCTTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSETKLGM*RAPFLG
Trigger: GCCTAGGAAAGGAGCTCGTCACATACCTAGTTTAGT...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATCGCGTTCTTCCTATATaGATGCCCGACGTCACAAGT +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDRVLPI*MPDVTS
Trigger: ACTTGTGACGTCGGGCATTCATATAGGAAGAACGCG...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCAAGTTCATTCCTTTTaGAGTCTGGAGGTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVQVHSF*SLEVGL
Trigger: AAGACCTACCTCCAGACTTCAAAAGGAATGAACTTG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTAGAGGTATGTGGCCTTTaGAACTACCTCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVEVCGL*NYLPEA
Trigger: TGCTTCAGGGAGGTAGTTTCAAAGGCCACATACCTC...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCATGGGGCATATGGCATaGATACCTCAGAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: SISEKATHKAHRCNGQFLMGHMA*IPQKRS
Trigger: AGATCTCTTCTGAGGTATTCATGCCATATGCCCCAT...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATTTAGCAGGTTCAGCATaGTACCACCTGGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYLAGSA*YHLDLQ
Trigger: TTGGAGATCCAGGTGGTATCATGCTGAACCTGCTAA...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCTCTGGGAGGGTATTTTaGAAGAAACAGATGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFSGRVF*KKQMEK
Trigger: CTTTTCCATCTGTTTCTTTCAAAATACCCTCCCAGA...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACACAGCATTGGGCAGTATaGGGATACTTCACCACAGAG +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTQHWAV*GYFTTE
Trigger: CTCTGTGGTGAAGTATCCTCATACTGCCCAATGCTG...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACAGACTCTTGTTTTTGCTaGCTTTGGGTCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: WLMEFYRSSENQHISVCTDSCFC*LWVFPW
Trigger: CCAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTC...TGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCTTCTCCAGTGGCTTCTaGTTTCTTTTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFFSSGF*FLLSCF
Trigger: AAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAA...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403681.7
ENST00000539662.1
CDS-3UTR GCA 90 bp TTGGTAGTAGATTGTCCTGTGGATATGACATCAGGATGGGGCATATGGCATGAAAACTACATCTTGGGATaGAGACTTCAGTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: LVVDCPVDMTSGWGIWHENYILG*RLQLET
Trigger: TGTTTCCAACTGAAGTCTGCATCCCAAGATGTAGTT...TTCATGCCATATGCCCCATCCTGATGTCATATCCACAGGACAATCTACTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR GCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTAGAATAAGTGGTCACTaGAGTGTCTTCTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVRISGH*SVFSLQ
Trigger: TTGAAGGGAGAAGACACTGCAGTGACCACTTATTCT...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCTGGAGGTAGGTCTTTaGAAGTCAATTAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVLEVGL*KSISPS
Trigger: AGATGGACTAATTGACTTGCAAAGACCTACCTCCAG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCGCCAACATGAGCAATTaGTTCCATTTTATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFANMSN*FHFMSW
Trigger: CCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGC...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp TGTGTCCCCACAAGACTCATATCCTCCACTTTTACACAACTTGAACTTGGCAGACAGTTGATTCATGTGTaGTCAGTCCAACTGATTTGT +
Preference number: 4 (lower is better)
Translates to: CVPTRLISSTFTQLELGRQLIHV*SVQLIC
Trigger: ACAAATCAGTTGGACTGAGCACACATGAATCAACTG...TCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAGTCTTGTGGGGACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR GCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACATTGATACGCTTCCTCTaGCCTCCAATTTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTLIRFL*PPISLC
Trigger: GCACAGGGAAATTGGAGGGCAGAGGAAGCGTATCAA...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAGATTGAAAGTGCCTTaGGCAGTCGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSERLKVP*AVGKQR
Trigger: CCTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCT...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATTGTTTTTGCTGCCTTTaGGTCTTCCCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHCFCCL*VFPWVS
Trigger: AGAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACA...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp AATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCATGTTTTTGCTGCCTTTaGGTCTTCCCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NSIEVLRISTSLYVHLEACFCCL*VFPWVS
Trigger: AGAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACA...TGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCTTCAGTGACTCCTTTTaGTACTGTTTCCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSFSDSF*YCFPEM
Trigger: CATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAA...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCTATAAAGGGCAAATCTaGAACAGGGTCTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCYKGQI*NRVCKI
Trigger: TATCTTACAGACCCTGTTCCAGATTTGCCCTTTATA...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGACCCCTGCAACAGGGTaGTCCTTCACTTTTCATTTC +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKTPATG*SFTFHF
Trigger: GAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCTTGCAATTCTCTCATTaGGAAATTGAAAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCLQFSH*EIEKEQ
Trigger: CTGCTCCTTTTCAATTTCCCAATGAGAGAATTGCAA...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 72 bp GTCCTTCACTTTTCATTTCTCTCTAGATGCATGTACTaGTATACACAAACACAAGTGCGTATGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VLHFSFLSRCMY*YTQTQVRMQVL
Trigger: CAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCATCTAGAGAGAAATGAAAAGTGAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp TCTTTTCAAACTGATGAACACCACATGACACCAAATCTCTGCTATTGGAAGAAAGTGAATTGTGTCCCTTaGAATGTTAGGCGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SFQTDEHHMTPNLCYWKKVNCVP*NVRRGK
Trigger: CTTTCCCCGCCTAACATTTCAAGGGACACAATTCAC...TTTCTTCCAATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAGTTTGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp AATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAGTGAATTGTGTCCCTTaGAATGTTAGGCGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: NSIEVLRISTSLYVHLEAVNCVP*NVRRGK
Trigger: CTTTCCCCGCCTAACATTTCAAGGGACACAATTCAC...TGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCACCATAGCCACACTGTaGTTTCTGCAAAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSTIATL*FLQKGG
Trigger: TCCACCTTTTTGCAGAAATCACAGTGTGGCTATGGT...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354636.7
CDS-3UTR TCA 90 bp TTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACCTGATGAACACCACATaGCACCAAATCTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: FNWQDWLMEFYRSSENQHLMNTT*HQISAI
Trigger: AATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAG...GTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp TTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACAGTGACCAATTGAAGTaGACTTTAAGCATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FNWQDWLMEFYRSSENQHSDQLK*TLSIWS
Trigger: GGACCAGATGCTTAAAGTTCACTTCAATTGGTCACT...GTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR TCA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGGTCTTTCATGGAAACTaGTACACAATGAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMVFHGN*YTMKRE
Trigger: CTCTCTTTTCATTGTGTATCAGTTTCCATGAAAGAC...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCTTAAAGAATTCATTTaGGGTACAGACTTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVLKEFI*GTDLEG
Trigger: ACCCTCCAAGTCTGTACCTCAAATGAATTCTTTAAG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp ACTTGGCAGAAGTGTTCTTCAGTTGATTCATGTGTGCTCAGTCCAACTGATTTGGATTTGTCAGTATCATaGGGATACGGTTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TWQKCSSVDSCVLSPTDLDLSVS*GYGFGL
Trigger: AAGACCAAAACCGTATCCTCATGATACTGACAAATC...CAAATCAGTTGGACTGAGCACACATGAATCAACTGAAGAACACTTCTGCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGATAGTTCACAGCCTGTaGTGCAAATGTGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKIVHSL*CKCELC
Trigger: GCAGAGTTCACATTTGCATCACAGGCTGTGAACTAT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAATTATGGGACACACTTaGTGTTTGCAGCTGATGACA +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQIMGHT*CLQLMT
Trigger: TGTCATCAGCTGCAAACATCAAGTGTGTCCCATAAT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAATGCTTTCTTTTGAGCTaGTTTAGAGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQCFLLS*FRGTLV
Trigger: AACAAGAGTCCCTCTAAAGCAGCTCAAAAGAAAGCA...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCTGCTTTCTTTTGAGCTaGTTTAGAGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFCFLLS*FRGTLV
Trigger: AACAAGAGTCCCTCTAAAGCAGCTCAAAAGAAAGCA...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403681.7
ENST00000539662.1
CDS-3UTR GCA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGACAGTAATTAAAAGTTaGATTGTTAAGCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQTVIKS*IVKLCP
Trigger: GGGACACAGCTTAACAATGCAACTTTTAATTACTGT...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCCATTTTCAGGAATACTaGAGGACGATAACCAAAAGT +
Preference number: 4 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFHFQEY*RTITKS
Trigger: ACTTTTGGTTATCGTCCTGCAGTATTCCTGAAAATG...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAGTCTTCATCTCTAGTTaGATATTAAACTCACTTAGG +
Preference number: 4 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIVFISS*ILNSLR
Trigger: CCTAAGTGAGTTTAATATGCAACTAGAGATGAAGAC...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCTGTAGAGGAAAATTCTaGAATATGAAGAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCCRGKF*NMKRKC
Trigger: GCATTTCCTCTTCATATTGCAGAATTTTCCTCTACA...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATAGATTGAAAGTGCCTTaGGCAGTCGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDRLKVP*AVGKQR
Trigger: CCTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCT...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATAGATTGAAAGTGCCTTaGGCAGTCGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENRLKVP*AVGKQR
Trigger: CCTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCT...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCCGAAGAAAAGCACCTTaGTCAACCATCTTATGTCAA +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFRRKAP*STILCQ
Trigger: TTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATTCTCAGAGAGGTATGTaGCCTTTGAAACTACCTCCC +
Preference number: 4 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHSQRGM*PLKLPP
Trigger: GGGAGGTAGTTTCAAAGGCCACATACCTCTCTGAGA...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp GGCAGAAGTGTTCTTCAGTTGATTCATGTGTGCTCAGTCCAACTGATTTGTCAGATGAGGATACGGTTTTaGTCTTCTCATTCCTTTATG +
Preference number: 4 (lower is better)
Translates to: GRSVLQLIHVCSVQLICQMRIRF*SSHSFM
Trigger: CATAAAGGAATGAGAAGACCAAAACCGTATCCTCAT...CTGACAAATCAGTTGGACTGAGCACACATGAATCAACTGAAGAACACTTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGGTTCCAGCATACCACTaGATAGGACACAGGCATATA +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKVPAYH*IGHRHI
Trigger: TATATGCCTGTGTCCTATCCAGTGGTATGCTGGAAC...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATGGAAGAGACTTGGAGTaGATTGTGTCCCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDGRDLE*IVSLEM
Trigger: CATTTCAAGGGACACAATTCACTCCAAGTCTCTTCC...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCGCCAGTGTTTTGAAATaGTCTAAAAGACACCTGATA +
Preference number: 4 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSASVLK*SKRHLI
Trigger: TATCAGGTGTCTTTTAGATCATTTCAAAACACTGGC...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATCTAAACCTGGGACTGTaGAGGGATTACAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDLNLGL*RDYKEG
Trigger: ACCTTCTTTGTAATCCCTTCACAGTCCCAGGTTTAG...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATTTGCATGCAGTGCAGTaGTTGACTAAACCCAATTCG +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDLHAVQ*LTKPNS
Trigger: CGAATTGGGTTTAGTCAATCACTGCACTGCATGCAA...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATAATTGTCCTGTGGATATaGCATCAGGATGGGGCATAT +
Preference number: 4 (lower is better)
Translates to: KATHKAHRCNGQFLKVKIIVLWI*HQDGAY
Trigger: ATATGCCCCATCCTGATGTCATATCCACAGGACAAT...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCACTTGTGGCTTCTTTaGGATTCTGAATTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKHLWLL*DSEFSW
Trigger: CCAAGAGAATTCAGAATCTCAAAGAAGCCACAAGTG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATAATCATTATGCTCCTTaGGTGAGTAGACGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYNHYAP*VSRRVS
Trigger: ACTCACTCGTCTACTCACTCAAGGAGCATAATGATT...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGGAAAATTCTGCAATATaGAGAGGAAATGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKENSAI*RGNAGS
Trigger: GCTGCCTGCATTTCCTCTTCATATTGCAGAATTTTC...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATTTCTCTGTAGACATCTaGGTGTCCAGCAAACATTTC +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYFSVDI*VSSKHF
Trigger: GAAATGTTTGCTGGACACTCAGATGTCTACAGAGAA...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTTCTCCAGTGGCTTCTaGTTTCTTTTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSFSSGF*FLLSCF
Trigger: AAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAA...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp TCAGCACATCTCTGTATGTACATCTTGAGGCAAACAGCAGAAATACTTCTTTTCGAAAGGCTTCTAAGCTaGAATGTAAAACTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SAHLCMYILRQTAEILLFERLLS*NVKLLP
Trigger: TGGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTC...GAAAAGAAGTATTTCTGCTGTTTGCCTCAAGATGTACATACAGAGATGTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR GCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATTCACCCGCCCACTCTTaGTTATCAGATCAACAAACT +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDSPAHS*LSDQQT
Trigger: AGTTTGTTGATCTGATAAGCAAGAGTGGGCGGGTGA...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTTTTTTGATTGCATTATaGAAAAGCAGGGCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVFLIAL*KSRACC
Trigger: GCAACAAGCCCTGCTTTTGCATAATGCAATCAAAAA...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATCCAGTCTTATGTAGCTaGGACCAACAACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDPVLCS*DQQQQR
Trigger: TCTTTGCTGTTGTTGGTCGCAGCTACATAAGACTGG...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACATATACCTGTCCTAATTaGCAGAGGCATCGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTYTCPN*QRHRLP
Trigger: TGGCAAACGATGCCTCTGGCAATTAGGACAGGTATA...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCCGCTGACTTCATCCTaGCAATATTCCTGTATTACA +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKPLTSS*QYSCIT
Trigger: TGTAATACAGGAATATTGGCAGGATGAAGTCAGCGG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAAATGCAGGCAGCCACTaGCATTTTGTTTTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTNAGSH*HFVLSL
Trigger: TAGGCTCAAAACAAAATGGCAGTGGCTGCCTGCATT...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATCATAGGTGTTGTATTTaGGGCCAGGGAACAGAATAT +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYHRCCI*GQGTEY
Trigger: ATATTCTGTTCCCTGGCCGCAAATACAACACCTATG...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCCATGAAGAGCTATCCTaGACTCCTCCAATGACAATT +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSHEELS*TPPMTI
Trigger: AATTGTCATTGGAGGAGTCCAGGATAGCTCTTCATG...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CCA 90 bp TTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGTTCAATTGGCAGGACTaGCTAATGGAATTCTATAGA +
Preference number: 4 (lower is better)
Translates to: LEERLLSCNVKLLLLQMRFNWQD*LMEFYR
Trigger: TCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAA...CCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR CCA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGGATATATTGCATCTCTaGCTAAAAGTGCAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMDILHL*LKVQFE
Trigger: TTCAAACTGCACTTTTAGCCAGAGATGCAATATATC...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
3UTR CAA 72 bp TTTACACAACTTGAACTTGGCAGAAGTGTTCTTCAGTaGATTCATGTGTGCTCAGTCCAACTGATTTGTCAG +
Preference number: 4 (lower is better)
Translates to: FTQLELGRSVLQ*IHVCSVQLICQ
Trigger: CTGACAAATCAGTTGGACTGAGCACACATGAATCAACTGAAGAACACTTCTGCCAAGTTCAAGTTGTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR TCA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGTCTGTATGTACATCTTaGGGCAAACAGCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSESVCTS*GKQQKY
Trigger: GTATTTCTGCTGTTTGCCTCAAGATGTACATACAGA...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAGGGCAACCTTTGATATaGTTCTTCATGTTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTGQPLI*FFMFCQ
Trigger: CTGGCAAAACATGAAGAATCATATCAAAGGTTGCCC...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATCTGAATGTAAGTGTCTaGGGCAATGCAACATATTTC +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYLNVSV*GNATYF
Trigger: GAAATATGTTGCATTGCCTCAGACACTTACATTCAG...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTGCTTTCTTTTGAGCTaGTTTAGAGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSCFLLS*FRGTLV
Trigger: AACAAGAGTCCCTCTAAAGCAGCTCAAAAGAAAGCA...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR GCA 90 bp TCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAAACTGCTTTCTTTTGAGCTaGTTTAGAGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SIEVLRISTSLYVHLEANCFLLS*FRGTLV
Trigger: AACAAGAGTCCCTCTAAAGCAGCTCAAAAGAAAGCA...GTTTGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGTGCTTTCTTTTGAGCTaGTTTAGAGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKCFLLS*FRGTLV
Trigger: AACAAGAGTCCCTCTAAAGCAGCTCAAAAGAAAGCA...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATTCTCCAGTGGCTTCTaGTTTCTTTTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WLMEFYRSSENQHISVCTFSSGF*FLLSCF
Trigger: AAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAA...TGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATTTCTCCAGTGGCTTCTaGTTTCTTTTGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENFSSGF*FLLSCF
Trigger: AAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAA...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp GACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTATGACACCAAATCTCTaGTATTGGAAGAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: DWLMEFYRSSENQHISVCMTPNL*YWKKGF
Trigger: GAAGCCTTTCTTCCAATAGCAGAGATTTGGTGTCAT...ACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTTTGACTAGGGTTAGCTaGAGTTTGAACTATTTCAAA +
Preference number: 4 (lower is better)
Translates to: MFGQHEQLLPFYELANEVLTRVS*SLNYFK
Trigger: TTTGAAATAGTTCAAACTGCAGCTAACCCTAGTCAA...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCGAGCCACTGTTTATTTaGTTATTTAACGCACAGTTA +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFEPLFI*LFNAQL
Trigger: TAACTGTGCGTTAAATAAGCAAATAAACAGTGGCTC...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp TCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAAACGAAAGGCTTCTAAGCTaGAATGTAAAACTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SIEVLRISTSLYVHLEANERLLS*NVKLLL
Trigger: AAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTC...GTTTGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR GCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATGAAGATGATTCTGAATaGTTTAGCCCTAACAGTAGG +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYEDDSE*FSPNSR
Trigger: CCTACTGTTAGGGCTAAAGCATTCAGAATCATCTTC...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAAAGTGTCTGAGGCAATaGAACATATTTCTATGCAAC +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQKCLRQ*NIFLCN
Trigger: GTTGCATAGAAATATGTTGCATTGCCTCAGACACTT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCAAAAATGAGGTATACTaGGACTTAAGAGGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: MKVERPWQYRISGHCSVFKNEVY*DLRGSS
Trigger: ACTACTACCTCTTAAGTCCCAGTATACCTCATTTTT...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAACACATTGACATTCTGTaGTCATTTGCTCAACAAATG +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQHIDIL*SFAQQM
Trigger: CATTTGTTGAGCAAATGACCACAGAATGTCAATGTG...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACACTCCCATTAGGATTATaGGACACACTTGATGTTTGC +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTLPLGL*DTLDVC
Trigger: GCAAACATCAAGTGTGTCCCATAATCCTAATGGGAG...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATAGTGGATTGAAAGGGTaGAGAGCTGTTAGGATTTTA +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYSGLKG*RAVRIL
Trigger: TAAAATCCTAACAGCTCTCCACCCTTTCAATCCACT...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAATTAAGGGTTAAACCTTaGTTTCTACTTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQLRVKP*FLLCSL
Trigger: GAGAGAGCAAAGTAGAAACCAAGGTTTAACCCTTAA...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGAGTAATGCTGGTCTCTaGGATACAATGAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKSNAGL*DTMNFS
Trigger: GGAGAAATTCATTGTATCCCAGAGACCAGCATTACT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 72 bp AAATACTCCCACCATAGTGGATTTCAAGCTACCTACTaGACATCACTGAACACAGAATTCAGAAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: KYSHHSGFQATY*TSLNTEFRRDV
Trigger: AACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTAGGTAGCTTGAAATCCACTATGGTGGGAGTATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp TCTTTTCAAACTGATGAACACCACATGACACCAAATCTCTGCTATTGGAAGAAATCTGTATGTACATCTTaGGGCAAACAGCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: SFQTDEHHMTPNLCYWKKSVCTS*GKQQKY
Trigger: GTATTTCTGCTGTTTGCCTCAAGATGTACATACAGA...TTTCTTCCAATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAGTTTGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR TCA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATGAAGAGAGATGGTTTTaGGTTTCATTTGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDEERWF*VSFGFS
Trigger: ACTGAAGCCAAATGAAACTCAAAACCATCTCTCTTC...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR TCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATACTAAGCACAAGGGCTaGATCAATATTAACAAACCA +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYTKHKG*ININKP
Trigger: TGGTTTGTTAATATTGATTCAGCCCTTGTGCTTAGT...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGAATAATCTCCACCTATaGTGTATTTGTTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKNNLHL*CICSCL
Trigger: GAGGCAAGAACAAATACATCATAGGTGGAGATTATT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp AATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGTGCTTTCTTTTGAGCTaGTTTAGAGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: NFNWQDWLMEFYRSSENQCFLLS*FRGTLV
Trigger: AACAAGAGTCCCTCTAAAGCAGCTCAAAAGAAAGCA...CTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR GCA 90 bp AATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAATGACACCAAATCTCTaGTATTGGAAGAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: NSIEVLRISTSLYVHLEAMTPNL*YWKKGF
Trigger: GAAGCCTTTCTTCCAATAGCAGAGATTTGGTGTCAT...TGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATTTTGGGAGGTTTTCATaGTACGATTGCAGACTATAT +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYFGRFS*YDCRLY
Trigger: ATATAGTCTGCAATCGTACCATGAAAACCTCCCAAA...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGTCTCATGTGTTTTCATaGAGTGTCTTCATCTCTAGT +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKSHVFS*SVFISS
Trigger: ACTAGAGATGAAGACACTCCATGAAAACACATGAGA...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAATCCCATTTCCTAGATaGATAAATAGAGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: SSITENTATEVMLVSGIQIPFPR*INRAKR
Trigger: TCTCTTTGCTCTATTTATCCATCTAGGAAATGGGAT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGAACTATTTACTGCACTaGCCAAGGTACCATGTAAAA +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKNYLLH*PRYHVK
Trigger: TTTTACATGGTACCTTGGCCAGTGCAGTAAATAGTT...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGTTGGGTCAGCAAGTTTaGAGAGTAAGAAGAAAGATT +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKLGQQV*RVRRKI
Trigger: AATCTTTCTTCTTACTCTCCAAACTTGCTGACCCAA...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACATGTTCCACATTAATTTaGGTCAGCAAGTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTCSTLI*VSKFGE
Trigger: CTCTCCAAACTTGCTGACCCAAATTAATGTGGAACA...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
3UTR CAA 72 bp TTCTTAGAAAGACCAGGTTTTAAAGCCAGTTGCTATTaGTTCCACATTAATTTGGGTCAGCAAGTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FLERPGFKASCY*FHINLGQQVWR
Trigger: TCTCCAAACTTGCTGACCCAAATTAATGTGGAACAAATAGCAACTGGCTTTAAAACCTGGTCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR TCA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATCACATATGCTTAATTTaGGGTAAGTGGTATTCAGGT +
Preference number: 4 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHHICLI*GKWYSG
Trigger: ACCTGAATACCACTTACCTCAAATTAAGCATATGTG...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR GCA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATTGCAATTCATCAACTTaGTTGTCCCAAAATGAAATC +
Preference number: 4 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYCNSST*LSQNEI
Trigger: GATTTCATTTTGGGACAAGCAAGTTGATGAATTGCA...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR GCA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACATTGATCAGTTTTCCATaGCAGGTTCAATTCTTACTG +
Preference number: 4 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTLISFP*QVQFLL
Trigger: CAGTAAGAATTGAACCTGGCATGGAAAACTGATCAA...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGTCACTAAGCAACATCTaGATGGAGGATTTTATACAT +
Preference number: 4 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSESLSNI*MEDFIH
Trigger: ATGTATAAAATCCTCCATCCAGATGTTGCTTAGTGA...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CCA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTAAAAGTGGAAAGACCATaGCAATACAGAATAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVKVERP*QYRISG
Trigger: ACCACTTATTCTGTATTGCCATGGTCTTTCCACTTT...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CCA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGGTACTAAACATTTACTaGCCCACAAGATGTTTTACT +
Preference number: 4 (lower is better)
Translates to: DSGGNARRELCFSKGDNKVLNIY*PTRCFT
Trigger: AGTAAAACATCTTGTGGGCCAGTAAATGTTTAGTAC...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CCA 90 bp TTCAGTTCTCCCTTCTCGATCCTCAAATCATCACTTAAATTTCTAGATTTCTACTTCAATTGGCAGGACTaGCTAATGGAATTCTATAGA +
Preference number: 4 (lower is better)
Translates to: FSSPFSILKSSLKFLDFYFNWQD*LMEFYR
Trigger: TCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAA...GTAGAAATCTAGAAATTTAAGTGATGATTTGAGGATCGAGAAGGGAGAACTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393578.7
3UTR CAA 72 bp CTAAACATTTACTGGCCCACAAGATGTTTTACTAGCTaGAAAGTGCATAAGCAAGAAAATAAATACATCGGT +
Preference number: 4 (lower is better)
Translates to: LNIYWPTRCFTS*KVHKQENKYIG
Trigger: ACCGATGTATTTATTTTCTTGCTTATGCACTTTCAAGCTAGTAAAACATCTTGTGGGCCAGTAAATGTTTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS GCA 90 bp TGGGGACGCCGGCGGGGCGAGCGCGAGCTGGCGGGCTGCGAGGGCTaGTGTTGCTTAGGCTGCCGCCGCTGCCACCATCAACACCGGACG +
Preference number: 5 (lower is better)
Translates to: WGRRRGERELAGCEG*CCLGCRRCHHQHRT
Trigger: CGTCCGGTGTTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCAGCCCTCGCAGCCCGCCAGCTCGCGCTCGCCCCGCCGGCGTCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000541363.5
ENST00000545998.1
CDS TCA 90 bp GCGTCCTCTCTTCTGAGGCGCTGGGGCGGCAGGTTGTCCCTGGGCTaGAGTGGACGGCTGCCCCGCGCCCTCACCGCGTGCGCTCATCCT +
Preference number: 5 (lower is better)
Translates to: ASSLLRRWGGRLSLG*SGRLPRALTACAHP
Trigger: AGGATGAGCGCACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGAGGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354636.7
ENST00000393577.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000541363.5
ENST00000545998.1
CDS TCA 90 bp CAGCGGCGGCACCGGAGAGTCGGAGGGGGACGGGCTGCTAGCTCCTaGGTCTTGCACCAAGCGCGCGCTGCCCGGGCTGGAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: QRRHRRVGGGRAASS*VLHQARAARAGSFL
Trigger: CAGAAAACTTCCAGCCCGGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAGCAGCCCGTCCCCCTCCGACTCTCCGGTGCCGCCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
CDS TCA 90 bp GTTGGTTCTTGCTGCTGCTTCCTGGGGCGGCCGCGTCCTCTCTTCTaGGGCGCTGGGGCGGCAGGTTGTCCCTGGGCTGAAGTGGACGGC +
Preference number: 5 (lower is better)
Translates to: VGSCCCFLGRPRPLF*GAGAAGCPWAEVDG
Trigger: GCCGTCCACTTCAGCCCAGGGACAACCTGCCGCCCCAGCGCCTCAGAAGAGAGGACGCGGCCGCCCCAGGAAGCAGCAGCAAGAACCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354636.7
ENST00000393577.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000541363.5
ENST00000545998.1
CDS-3UTR CAA 90 bp ATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACCTCTGAGTGCAGGCTCCTCTCGCGGGTaGGGATCAGGAGTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: METYSGTYRGSLGPPLSAGSSRG*GSGVAG
Trigger: GCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCC...TGCACTCAGAGGTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS GCA 90 bp GCTTTGAGGTCGCAGAGGCTCCTCTCGCGGGTTGGGATCAGGAGTTaGGGGCACCGGGAGCACTTCGGAAGCGGCTTGGAAAGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: ALRSQRLLSRVGIRS*GHREHFGSGLEREE
Trigger: CTCTTCCCTTTCCAAGCCGCTTCCGAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCCTCTGCGACCTCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000545998.1
CDS-3UTR CAA 90 bp CAGCCGCCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGGGTTGGGATCAGGAGTaGCGGGCACCGGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: QPPGVSTLIPLRTRWTALGWDQE*RAPGAL
Trigger: AAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACC...CAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp CGGGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAGGCTCCTCTCGCGGGTaGGGATCAGGAGTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: RGSLGPPLSAREKSAVQGGSSRG*GSGVAG
Trigger: GCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCC...TCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CAA 90 bp CTCCACAGAGCCATGCCAGCGACTGACCGCCCAGGGACAGGAGATGGAGACGTTCTCACCGGTTGGTTCTaGCTGCTGCTTCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: LHRAMPATDRPGTGDGDVLTGWF*LLLPGA
Trigger: CGCCCCAGGAAGCAGCAGCAAGAACCAACCGGTGAG...AACGTCTCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCATGGCTCTGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp CAGCCGCCAGGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGCTGTCATCCCACCACTaGCGCGCAAGGCCAGTTCCG +
Preference number: 5 (lower is better)
Translates to: QPPGVSTLIPLRTRWTALLSSHH*RARPVP
Trigger: CGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAG...CAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCCTGGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS CCA 90 bp AGAAGGAAGAGAGGCTTTGAGGTCGCAGAGGCTCCTCTCGCGGGTTaGGATCAGGAGTTGCGGGCACCGGGAGCACTTCGGAAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: RRKRGFEVAEAPLAG*DQELRAPGALRKRL
Trigger: AAGCCGCTTCCGAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000545998.1
CDS-3UTR CAA 90 bp CTCCACAGAGCCATGCCAGCGACTGACCGCCCAGGGACAGGAGATGGAGACGTTGAAGGAAGAGAGGCTTaGAGGTCGCAGAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LHRAMPATDRPGTGDGDVEGREA*RSQRLL
Trigger: GAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTTC...AACGTCTCCATCTCCTGTCCCTGGGCGGTCAGTCGCTGGCATGGCTCTGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp AGGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGACTCACCGGTTGGTTCTaGCTGCTGCTTCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: RKGMCLSSHHLRARPVPGLTGWF*LLLPGA
Trigger: CGCCCCAGGAAGCAGCAGCAAGAACCAACCGGTGAG...TCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CAA 90 bp GAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGCTGTCATCCCACCACTaGCGCGCAAGGCCAGTTCCG +
Preference number: 5 (lower is better)
Translates to: ECVCHPTTCAQGQFRDQQLSSHH*RARPVP
Trigger: CGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAG...CTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR CAA 90 bp GTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCCACTTCGGAAGCGGCTaGGAAAGGGAAGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: VCHPTTCAQGQFRDQQASHFGSG*EREETW
Trigger: CCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAGTG...GGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CAA 90 bp GGGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGGGTTGGGATCAGGAGTaGCGGGCACCGGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: GLSRATSECKGKECSSRKGWDQE*RAPGAL
Trigger: AAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACC...CTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CAA 90 bp AGGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGAGAGAGGGCTCACCGGTaGGTTCTTGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RKGMCLSSHHLRARPVPGERAHR*VLAAAS
Trigger: GGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCTC...TCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CAA 90 bp CCTTCTGCAGCATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCGGGCCACGAGATTGAAAGTGCCTaGGGCAGTCGGAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: PSAAWKHTPGPTGALSGHEIESA*GSRKAK
Trigger: CTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCTC...GTGGCCCGAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp CCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACCTCCACTTCGGAAGCGGCTaGGAAAGGGAAGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: PGSAGFLHQHGLFISNHLHFGSG*EREETW
Trigger: CCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAGTG...GAGGTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CAA 90 bp CAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCGAAGGAAGAGAGGCTTaGAGGTCGCAGAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QFRDQQASFTSTGSSLATEGREA*RSQRLL
Trigger: GAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTTC...GGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CAA 90 bp AATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGGGTAGAAATCGAACGTaGGCGCCCCCTAGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: NVSVIPPLARKASSGISRGRNRT*APPSPL
Trigger: AAGAGGACTAGGGGGCGCCAACGTTCGATTTCTACC...CCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS-3UTR CAA 90 bp GGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATGAGGAACCCCCGCAATaGGAATCTCTCCATGCCTTC +
Preference number: 5 (lower is better)
Translates to: GRECVCHPTTCAQGQFRDEEPPQ*ESLHAF
Trigger: GAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTC...ATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGGGCTCCTCTCGCGGGTaGGGATCAGGAGTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQGSSRG*GSGVAG
Trigger: GCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCC...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp CTCCATGCCTTCTGCAGCATGGAAACATACTCCGGGACCTACCGGGGCTCTCTCTTGTTTTTGCTGCCTTaGGGTCTTCCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LHAFCSMETYSGTYRGSLLFLLP*GLPLGL
Trigger: GAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACAA...GAGAGAGCCCCGGTAGGTCCCGGAGTATGTTTCCATGCTGCAGAAGGCATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp CCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCACCTCTTGTTTTTGCTGCCTTaGGGTCTTCCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: PGSAGFLHQHGLFISNHLLFLLP*GLPLGL
Trigger: GAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACAA...GAGGTGGTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CAA 90 bp AGGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATTGTTTTTGCTGCCTTaGGGTCTTCCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: RKGMCLSSHHLRARPVPGLFLLP*GLPLGL
Trigger: GAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACAA...TCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR CAA 90 bp CCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGCTGGGGATTGCTGGGGTTGGGATCAGGAGTaGCGGGCACCGGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: PLPNKGNQQPEKPAGDCWGWDQE*RAPGAL
Trigger: AAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACC...CCAGCAATCCCCAGCTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CAA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGGGCTCCTCTCGCGGGTaGGGATCAGGAGTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQGSSRG*GSGVAG
Trigger: GCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCC...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp GACAGCTTTGGTGATAGACAACTGGGAGGTAAAACTCCACAGAGCCATGCCAGCGAGAGGGCTCACCGGTaGGTTCTTGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: DSFGDRQLGGKTPQSHASERAHR*VLAAAS
Trigger: GGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCTC...GCTGGCATGGCTCTGTGGAGTTTTACCTCCCAGTTGTCTATCACCAAAGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp GGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCTGCTTTCTTTaGAGCTGCTTTAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: GMCLSSHHLRARPVPGSAGFCFL*SCFRGT
Trigger: AGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGCC...TGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425208.6
ENST00000537429.5
ENST00000539662.1
CDS-3UTR CAA 90 bp TCCCACCACTTGCGCGCAAGGCCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGAGAAGTGTTCTTCAGTaGATTCATGTGTGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: SHHLRARPVPGSAGFLHQRSVLQ*IHVCSV
Trigger: GACTGAGCACACATGAATCAACTGAAGAACACTTCT...CTGGTGAAGGAAGCCTGCTGATCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CAA 90 bp CGGCAGACTCTTGTGAGGATGTCTCTTCAGTTTCCTCCTGAGCAGGCTTCTTCTCTTCTGAACAACTTGTaGTGGCGGGGCTCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: RQTLVRMSLQFPPEQASSLLNNL*WRGSLG
Trigger: CCCGAGAGAGCCCCGCCACAACAAGTTGTTCAGAAG...AGAAGAAGCCTGCTCAGGAGGAAACTGAAGAGACATCCTCACAAGAGTCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS-3UTR CAA 90 bp AGGAAGGGAATGTGTCTGTCATCCCACCACTTGCGCGCAAGGCCAGTTCCGGGAGAGAGAGAGAAGAGATaGAGATTGAAAGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: RKGMCLSSHHLRARPVPGEREKR*RLKVPW
Trigger: CCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTC...TCCCGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAGACACATTCCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CAA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCGGCTCCTCTCGCGGGTaGGGATCAGGAGTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSGSSRG*GSGVAG
Trigger: GCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCC...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CAA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACGAAGGAAGAGAGGCTTaGAGGTCGCAGAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SYKGAIWGSSETTSWDADEGREA*RSQRLL
Trigger: GAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTTC...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGGAGAGGGCTCACCGGTaGGTTCTTGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQERAHR*VLAAAS
Trigger: GGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCTC...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp GGGGTTTCCACGCTCATTCCCCTCCGGACAAGGTGGACAGCTTTGGTGATAGACGGCTTCTGCTTTCTTTaGAGCTGCTTTAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: GVSTLIPLRTRWTALVIDGFCFL*SCFRGT
Trigger: AGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGCC...GTCTATCACCAAAGCTGTCCACCTTGTCCGGAGGGGAATGAGCGTGGAAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp TCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAACTTCTTCTGAACAACTaGTTGTGGCGGGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SLGPPLSAREKSAVQGRELLLNN*LWRGSL
Trigger: GAGAGAGCCCCGCCACAACAAGTTGTTCAGAAGAAG...TTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539662.1
CDS TCA 90 bp CCGGGAGCACTTCGGAAGCGGCTTGGAAAGGGAAGAGACTTGGAGTaGATTGTGTCCCTTGAAATGTTAGGCGGGGAAAGAATTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PGALRKRLGKGRDLE*IVSLEMLGGERIPP
Trigger: AGGAGGAATTCTTTCCCCGCCTAACATTTCAAGGGACACAATTCACTCCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAGTGCTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
CDS-3UTR CAA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGCTCACCGGTTGGTTCTaGCTGCTGCTTCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMLTGWF*LLLPGA
Trigger: CGCCCCAGGAAGCAGCAGCAAGAACCAACCGGTGAG...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGGAGAGGGCTCACCGGTaGGTTCTTGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQERAHR*VLAAAS
Trigger: GGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCTC...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCGAGAGGGCTCACCGGTaGGTTCTTGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCERAHR*VLAAAS
Trigger: GGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCTC...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAAACGGCTCCTCTCGCGGGTaGGGATCAGGAGTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: SIEVLRISTSLYVHLEANGSSRG*GSGVAG
Trigger: GCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCC...GTTTGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp TCAGCACATCTCTGTATGTACATCTTGAGGCAAACAGCAGAAATACTTCTTTTCGGCTCCTCTCGCGGGTaGGGATCAGGAGTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: SAHLCMYILRQTAEILLFGSSRG*GSGVAG
Trigger: GCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCC...GAAAAGAAGTATTTCTGCTGTTTGCCTCAAGATGTACATACAGAGATGTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCCTCACCGGTTGGTTCTaGCTGCTGCTTCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSLTGWF*LLLPGA
Trigger: CGCCCCAGGAAGCAGCAGCAAGAACCAACCGGTGAG...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CAA 90 bp GAGGAACCCCCGCAATTGGAATCTCTCCATGCCTTCTGCAGCATGGAAACATACACAAGGTGGACAGCTTaGGTGATAGACAACTGGGAG +
Preference number: 5 (lower is better)
Translates to: EEPPQLESLHAFCSMETYTRWTA*VIDNWE
Trigger: CTCCCAGTTGTCTATCACCAAAGCTGTCCACCTTGT...GTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp CCAGTTCCGGGATCAGCAGGCTTCCTTCACCAGCACGGGCTCTTCATTAGCAACCCACTTTTACACAACTaGAACTTGGCAGAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: PVPGSAGFLHQHGLFISNPLLHN*NLAEVF
Trigger: GAACACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGG...GTTGCTAATGAAGAGCCCGTGCTGGTGAAGGAAGCCTGCTGATCCCGGAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CAA 90 bp GAGGAACCCCCGCAATTGGAATCTCTCCATGCCTTCTGCAGCATGGAAACATACGAGAAGAGATTGAGATaGAAAGTGCCTTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: EEPPQLESLHAFCSMETYEKRLR*KVPWAV
Trigger: GACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTC...GTATGTTTCCATGCTGCAGAAGGCATGGAGAGATTCCAATTGCGGGGGTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425208.6
CDS-3UTR CAA 90 bp TCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGGGAAGAGAGAGAGAAGAGATaGAGATTGAAAGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SLGPPLSAREKSAVQGREEREKR*RLKVPW
Trigger: CCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTC...TTCCCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425208.6
ENST00000537429.5
CDS-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAACTCACCGGTTGGTTCTaGCTGCTGCTTCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: SSITENTATEVMLVSGIQLTGWF*LLLPGA
Trigger: CGCCCCAGGAAGCAGCAGCAAGAACCAACCGGTGAG...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGTTGTTTTTGCTGCCTTaGGGTCTTCCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQLFLLP*GLPLGL
Trigger: GAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACAA...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGGGTAGAAATCGAACGTaGGCGCCCCCTAGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQGRNRT*APPSPL
Trigger: AAGAGGACTAGGGGGCGCCAACGTTCGATTTCTACC...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403681.7
ENST00000539662.1
CDS-3UTR CAA 90 bp TCAGTCCAACTGATTTGTCAGTATCATGAGGATACGGTTTTGGTCTTCTCATTCCTGTCATCCCACCACTaGCGCGCAAGGCCAGTTCCG +
Preference number: 5 (lower is better)
Translates to: SVQLICQYHEDTVLVFSFLSSHH*RARPVP
Trigger: CGGAACTGGCCTTGCGCGCAAGTGGTGGGATGACAG...GAATGAGAAGACCAAAACCGTATCCTCATGATACTGACAAATCAGTTGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CAA 90 bp GGCTCTCTCGGGCCACCTCTGAGTGCAAGGGAAAAGAGTGCAGTTCAAGGAAGGCATGAGGATACGGTTTaGGTCTTCTCATTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: GSLGPPLSAREKSAVQGRHEDTV*VFSFLY
Trigger: ATAAAGGAATGAGAAGACCAAAACCGTATCCTCATG...CCTTCCTTGAACTGCACTCTTTTCCCTTGCACTCAGAGGTGGCCCGAGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CAA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACGAGAAGAGATTGAGATaGAAAGTGCCTTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SYKGAIWGSSETTSWDADEKRLR*KVPWAV
Trigger: GACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTC...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp AGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCTGGTTCCACTTCGGAAGCGGCTaGGAAAGGGAAGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: SDSFWYCFPEMFSSWSWFHFGSG*EREETW
Trigger: CCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAGTG...GAACCAGCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CAA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCGGTTGGGATCAGGAGTaGCGGGCACCGGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSGWDQE*RAPGAL
Trigger: AAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACC...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCGAGAGGGCTCACCGGTaGGTTCTTGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SISEKATHKAHRCNGQFLERAHR*VLAAAS
Trigger: GGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCTC...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp TCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGACGGCTTCTGCTTTCTTTaGAGCTGCTTTAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: SYKGAIWGSSETTSWDADGFCFL*SCFRGT
Trigger: AGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGCC...GTCTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCCTTACTGAGATTTCTTaGCCCGGGTGCACACCACCC +
Preference number: 5 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFLTEIS*PGCTPP
Trigger: GGGTGGTGTGCACCCGGGCAAAGAAATCTCAGTAAG...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp ATTCGTACAAGGGTGCCATATGGGGTAGCAGTGAAACTACATCTTGGGATGCAGGAGAAGAGATTGAGATaGAAAGTGCCTTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: IRTRVPYGVAVKLHLGMQEKRLR*KVPWAV
Trigger: GACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTC...CTGCATCCCAAGATGTAGTTTCACTGCTACCCCATATGGCACCCTTGTACGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp ACGGCTCTGACTAATAGCTCATGCCTCAACTCTGTGTCCCCACAAGACTCATATGAGAAGAGATTGAGATaGAAAGTGCCTTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: TALTNSSCLNSVSPQDSYEKRLR*KVPWAV
Trigger: GACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTC...ATATGAGTCTTGTGGGGACACAGAGTTGAGGCATGAGCTATTAGTCAGAGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CAA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCACTTCGGAAGCGGCTaGGAAAGGGAAGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: MFGQHEQLLPFYELANEVHFGSG*EREETW
Trigger: CCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAGTG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATAGGTTGGGATCAGGAGTaGCGGGCACCGGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: KATHKAHRCNGQFLKVKIGWDQE*RAPGAL
Trigger: AAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACC...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTAGGTTGGGATCAGGAGTaGCGGGCACCGGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVGWDQE*RAPGAL
Trigger: AAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACC...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAGGTTGGGATCAGGAGTaGCGGGCACCGGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: NSIEVLRISTSLYVHLEAGWDQE*RAPGAL
Trigger: AAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACC...TGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATACTCACCGGTTGGTTCTaGCTGCTGCTTCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: KATHKAHRCNGQFLKVKILTGWF*LLLPGA
Trigger: CGCCCCAGGAAGCAGCAGCAAGAACCAACCGGTGAG...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp TGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACACTCACCGGTTGGTTCTaGCTGCTGCTTCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: WLMEFYRSSENQHISVCTLTGWF*LLLPGA
Trigger: CGCCCCAGGAAGCAGCAGCAAGAACCAACCGGTGAG...TGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp CCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCTCACCGGTTGGTTCTaGCTGCTGCTTCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: PNFNWQDWLMEFYRSSENLTGWF*LLLPGA
Trigger: CGCCCCAGGAAGCAGCAGCAAGAACCAACCGGTGAG...ATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGGAGAGGGCTCACCGGTaGGTTCTTGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSEERAHR*VLAAAS
Trigger: GGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCTC...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp GACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTGAGAGGGCTCACCGGTaGGTTCTTGCTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: DWLMEFYRSSENQHISVCERAHR*VLAAAS
Trigger: GGAAGCAGCAGCAAGAACCAACCGGTGAGCCCTCTC...ACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp TCCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTGGATGGAGGATTTTATTTGTTTTTGCTGCCTTaGGGTCTTCCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SSRSTSCITKQHLDGGFYLFLLP*GLPLGL
Trigger: GAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACAA...ATAAAATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CAA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGACTACAGGGAGTGGGTaGGGGTGGTATTTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMTTGSG*GWYLRC
Trigger: ACACCTCAAATACCACCCCAACCCACTCCCTGTAGT...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCCCTTTTCCCTTGACCTaGGTGATGTCAGAGGTCAGA +
Preference number: 5 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCPFPLT*VMSEVR
Trigger: TCTGACCTCTGACATCACCAAGGTCAAGGGAAAAGG...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCGAAGGAAGAGAGGCTTaGAGGTCGCAGAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSEGREA*RSQRLL
Trigger: GAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTTC...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGGAAGGAAGAGAGGCTTaGAGGTCGCAGAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSEEGREA*RSQRLL
Trigger: GAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTTC...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTTTGTTTTTGCTGCCTTaGGGTCTTCCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: MFGQHEQLLPFYELANEVLFLLP*GLPLGL
Trigger: GAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACAA...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp TCTTTTCCTCCAGAAGCACTAGCTGCATCACTAAGCAACATCTGGATGGAGGATTACTTCATTGTATTCTaGAGCCTGAGCCCCACTCTC +
Preference number: 5 (lower is better)
Translates to: SFPPEALAASLSNIWMEDYFIVF*SLSPTL
Trigger: GAGAGTGGGGCTCAGGCTCAAGAATACAATGAAGTA...ATCCTCCATCCAGATGTTGCTTAGTGATGCAGCTAGTGCTTCTGGAGGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CAA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCAGTAGATATATAAGATaGCCCGGGTGGTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCSRYIR*PGWSFP
Trigger: TGGGAAGGACCACCCGGGCAATCTTATATATCTACT...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAAGAGATTGAAAGTGCCTaGGGCAGTCGGAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQEIESA*GSRKAK
Trigger: CTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCTC...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATCACTTCGGAAGCGGCTaGGAAAGGGAAGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNHFGSG*EREETW
Trigger: CCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAGTG...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp ATGCCAAATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGCACTTCGGAAGCGGCTaGGAAAGGGAAGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: MPNFNWQDWLMEFYRSSEHFGSG*EREETW
Trigger: CCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAGTG...CTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATTTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp AATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGGAAGGAAGAGAGGCTTaGAGGTCGCAGAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: NFNWQDWLMEFYRSSENQEGREA*RSQRLL
Trigger: GAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTTC...CTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATGAAGGAAGAGAGGCTTaGAGGTCGCAGAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHEGREA*RSQRLL
Trigger: GAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTTC...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAGAAGGAAGAGAGGCTTaGAGGTCGCAGAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTEGREA*RSQRLL
Trigger: GAGGAGCCTCTGCGACCTCAAAGCCTCTCTTCCTTC...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GTCCCCACAAGACTCATATCCTCCACTTTTACACAACTTGAACTTGGCAGAAGTGGCTTCTGCTTTCTTTaGAGCTGCTTTAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: VPTRLISSTFTQLELGRSGFCFL*SCFRGT
Trigger: AGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGCC...ACTTCTGCCAAGTTCAAGTTGTGTAAAAGTGGAGGATATGAGTCTTGTGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537429.5
CDS-3UTR CAA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCGGGTTGGGGTGGTATTaGAGGTGTACACAGTGTTAC +
Preference number: 5 (lower is better)
Translates to: MKVERPWQYRISGHCSVFGLGWY*RCTQCY
Trigger: GTAACACTGTGTACACCTCAAATACCACCCCAACCC...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGCCGAAGAAAAGCACCTaGGTCAACCATCTTATGTCA +
Preference number: 5 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQPKKST*VNHLMS
Trigger: TGACATAAGATGGTTGACCAAGGTGCTTTTCTTCGG...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGATGCAAAAGCAGGGCTaGTTGCATCTCACCTACAAA +
Preference number: 5 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQMQKQG*LHLTYK
Trigger: TTTGTAGGTGAGATGCAACAAGCCCTGCTTTTGCAT...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAATGCCAGAGGCATCGTTaGCCAGGGCTGTACAACAAT +
Preference number: 5 (lower is better)
Translates to: SSITENTATEVMLVSGIQCQRHR*PGLYNN
Trigger: ATTGTTGTACAGCCCTGGCAAACGATGCCTCTGGCA...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAACGTTCATGAGTATCTaGAGTCAGTCCTGTCACAAC +
Preference number: 5 (lower is better)
Translates to: EEMFTICSQGLVPAYHWITFMSI*SQSCHN
Trigger: GTTGTGACAGGACTGACTCAAGATACTCATGAACGT...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCGAGATTGAAAGTGCCTaGGGCAGTCGGAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SISEKATHKAHRCNGQFLEIESA*GSRKAK
Trigger: CTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCTC...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp TTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACGAGATTGAAAGTGCCTaGGGCAGTCGGAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: FNWQDWLMEFYRSSENQHEIESA*GSRKAK
Trigger: CTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCTC...GTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp AGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCTGGTTCGAGAGAGAGAAGAGATaGAGATTGAAAGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SDSFWYCFPEMFSSWSWFEREKR*RLKVPW
Trigger: CCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTC...GAACCAGCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CAA 90 bp AATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACTTCGGAAGCGGCTaGGAAAGGGAAGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: NFNWQDWLMEFYRSSENQHFGSG*EREETW
Trigger: CCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAGTG...CTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp GACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTTTGTTTTTGCTGCCTTaGGGTCTTCCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: DWLMEFYRSSENQHISVCLFLLP*GLPLGL
Trigger: GAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACAA...ACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp TTGGAAGAAAGGCTTCTAAGCTGCAATGTAAAACTCCTCCTTTTGCAGATGAGGTACTTCATTGTATTCTaGAGCCTGAGCCCCACTCTC +
Preference number: 5 (lower is better)
Translates to: LEERLLSCNVKLLLLQMRYFIVF*SLSPTL
Trigger: GAGAGTGGGGCTCAGGCTCAAGAATACAATGAAGTA...CCTCATCTGCAAAAGGAGGAGTTTTACATTGCAGCTTAGAAGCCTTTCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR CAA 90 bp GTACTGCACACACCCCATTACCAAATAAAGGGAATCAGCAGCCTGAGAAACCAGTTAAGCATCTGGTCCTaGGATCAATTTCTAGGTCAA +
Preference number: 5 (lower is better)
Translates to: VLHTPHYQIKGISSLRNQLSIWS*DQFLGQ
Trigger: TTGACCTAGAAATTGATCCAAGGACCAGATGCTTAA...CTGGTTTCTCAGGCTGCTGATTCCCTTTATTTGGTAATGGGGTGTGTGCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393578.7
CDS-3UTR CAA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTAGTGTGACACGTTTCTaGTTTGCATGCAGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: MFGQHEQLLPFYELANEVSVTRF*FACSAV
Trigger: CACTGCACTGCATGCAAACAAGAAACGTGTCACACT...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp ATGTTTGGCCAACATGAGCAATTGCTTCCATTTTATGAGCTGGCCAATGAGGTTCTCTCCATAGCTCCTTaGGTGATTCACAACAGTGAG +
Preference number: 5 (lower is better)
Translates to: MFGQHEQLLPFYELANEVLSIAP*VIHNSE
Trigger: CTCACTGTTGTGAATCACCAAAGGAGCTATGGAGAG...AACCTCATTGGCCAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCCAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCATAAACTCTGCTGCTTaGTACCCCAGGTTCAACAAG +
Preference number: 5 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFINSAA*YPRFNK
Trigger: CTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTAT...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATAAAACCTGTTTTCCCTTaGGGTAGAAGAAAGGTGAGA +
Preference number: 5 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIKPVFP*GRRKVR
Trigger: TCTCACCTTTCTTCTACCCAAAGGGAAAACAGGTTT...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCGAGATTGAAAGTGCCTaGGGCAGTCGGAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: FLYRRKPHIRLIDVMDNSEIESA*GSRKAK
Trigger: CTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCTC...GGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATATTGTTTTTGCTGCCTTaGGGTCTTCCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: KATHKAHRCNGQFLKVKILFLLP*GLPLGL
Trigger: GAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACAA...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACATTGTTTTTGCTGCCTTaGGGTCTTCCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTLFLLP*GLPLGL
Trigger: GAGACCCAGGGGAAGACCCAAAGGCAGCAAAAACAA...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACGGCTTCTGCTTTCTTTaGAGCTGCTTTAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: FNWQDWLMEFYRSSENQHGFCFL*SCFRGT
Trigger: AGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGCC...GTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCCTTCTGAACAACTTGTaGTGGCCATTTCCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: MKVERPWQYRISGHCSVFLLNNL*WPFPRS
Trigger: AGACCTAGGAAATGGCCACAACAAGTTGTTCAGAAG...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AAAAGTGTAACTTTACCAGAGATGGAAATCACTCGGTGCACCATGTTTGGCCAACTTCTTCTGAACAACTaGTTGTGGCCATTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: KSVTLPEMEITRCTMFGQLLLNN*LWPFPR
Trigger: CCTAGGAAATGGCCACAACAAGTTGTTCAGAAGAAG...TTGGCCAAACATGGTGCACCGAGTGATTTCCATCTCTGGTAAAGTTACACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp ACCCCAGATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGCATTCAGAGGTAGTATaGAGTAGTGGGGATATATTG +
Preference number: 5 (lower is better)
Translates to: TPDESGKTMAIQNKWSLQHSEVV*SSGDIL
Trigger: CAATATATCCCCACTACTCAATACTACCTCTGAATG...CTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCATCTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGGGAAGAGAGATGGTTTaGAGTTTCATTTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMGREMV*SFIWLQ
Trigger: CTGAAGCCAAATGAAACTCAAAACCATCTCTCTTCC...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp CGAAGAAAAGCACCTTGGTCAACCATCTTATGTCAAAACGTATTACTTGAAGTACTCGGTGCACCATGTTaGGCCAACATGAGCAATTGC +
Preference number: 5 (lower is better)
Translates to: RRKAPWSTILCQNVLLEVLGAPC*ANMSNC
Trigger: GCAATTGCTCATGTTGGCCAAACATGGTGCACCGAG...TACTTCAAGTAATACGTTTTGACATAAGATGGTTGACCAAGGTGCTTTTCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCTGGTTCGTTCTTGGTAGTAGATaGTCCTGTGGATATGACATC +
Preference number: 5 (lower is better)
Translates to: SDSFWYCFPEMFSSWSWFVLGSR*SCGYDI
Trigger: GATGTCATATCCACAGGACAATCTACTACCAAGAAC...GAACCAGCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CAA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATATTAAGACCTTACATTTaGGGAGGTTTTCATGGTACG +
Preference number: 5 (lower is better)
Translates to: EEMFTICSQGLVPAYHWILRPYI*GGFHGT
Trigger: CGTACCATGAAAACCTCCCAAAATGTAAGGTCTTAA...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCCCCTCAAAGTGCTGTaGAAGGAAGGATATGAGGCT +
Preference number: 5 (lower is better)
Translates to: DSGGNARRELCFSKGDNKPLKVL*KEGYEA
Trigger: AGCCTCATATCCTTCCTTCAACAGCACTTTGAGGGG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAGAGGAGACTTCAGCATaGGGCAGTATGAGGATACTT +
Preference number: 5 (lower is better)
Translates to: SSITENTATEVMLVSGIQEETSA*GSMRIL
Trigger: AAGTATCCTCATACTGCCCAATGCTGAAGTCTCCTC...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATATTTGGGTCAGCAAGTTaGGAGAGTAAGAAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: EEMFTICSQGLVPAYHWIFGSAS*ESKKKD
Trigger: ATCTTTCTTCTTACTCTCCAAACTTGCTGACCCAAA...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GAAGAGATGTTCACTATTTGCTCACAAGGGCTGGTTCCAGCATACCACTGGATATTGTTCCACATTAATTaGGGTCAGCAAGTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: EEMFTICSQGLVPAYHWILFHIN*GQQVWR
Trigger: TCTCCAAACTTGCTGACCCAAATTAATGTGGAACAA...TATCCAGTGGTATGCTGGAACCAGCCCTTGTGAGCAAATAGTGAACATCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCTGAGGACTACCGGTTaGATCAGTTTTCCATGCCAG +
Preference number: 5 (lower is better)
Translates to: DSGGNARRELCFSKGDNKLRTTG*ISFPCQ
Trigger: CTGGCATGGAAAACTGATCAAACCGGTAGTCCTCAG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp AATAAACTCTGCTGCTTTGTACCCCAGGTTCAACAAGGGCCATTCTTGAAGTTCATTGTTAGGACTTCTTaGTGTGCGTTAGCATCAGCT +
Preference number: 5 (lower is better)
Translates to: NKLCCFVPQVQQGPFLKFIVRTS*CALASA
Trigger: AGCTGATGCTAACGCACACAAAGAAGTCCTAACAAT...GAACTTCAAGAATGGCCCTTGTTGAACCTGGGGTACAAAGCAGCAGAGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS TCA 90 bp TCATTGATGAAGTTAGGAGAGCTTGACTTGAGAAATCTCACCTTTTaGGCTGCTTTAGAGGGACTCTTGTTTTTGCTGCCTTTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: SLMKLGELDLRNLTF*AALEGLLFLLPLGL
Trigger: AAGACCCAAAGGCAGCAAAAACAAGAGTCCCTCTAAAGCAGCTCAAAAGGTGAGATTTCTCAAGTCAAGCTCTCCTAACTTCATCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545998.1
CDS-3UTR CAA 90 bp TCAGCACATCTCTGTATGTACATCTTGAGGCAAACAGCAGAAATACTTCTTTTCGAGAAGAGATTGAGATaGAAAGTGCCTTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SAHLCMYILRQTAEILLFEKRLR*KVPWAV
Trigger: GACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTC...GAAAAGAAGTATTTCTGCTGTTTGCCTCAAGATGTACATACAGAGATGTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp TCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCGAGAGAGAGAAGAGATaGAGATTGAAAGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SISEKATHKAHRCNGQFLEREKR*RLKVPW
Trigger: CCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTC...GAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATGGCTTCTGCTTTCTTTaGAGCTGCTTTAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNGFCFL*SCFRGT
Trigger: AGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGCC...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp TCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAAACGGCTTCTGCTTTCTTTaGAGCTGCTTTAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: SIEVLRISTSLYVHLEANGFCFL*SCFRGT
Trigger: AGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGCC...GTTTGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATGGCTTCTGCTTTCTTTaGAGCTGCTTTAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYGFCFL*SCFRGT
Trigger: AGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGCC...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp CAATTCAGTGACTCCTTTTGGTACTGTTTCCCAGAGATGTTTTCTTCTTGGAGCAGAGATGTTTTCTTCTaGGAGCTGGTTCTTGGTAGT +
Preference number: 5 (lower is better)
Translates to: QFSDSFWYCFPEMFSSWSRDVFF*ELVLGS
Trigger: ACTACCAAGAACCAGCTCCAAGAAGAAAACATCTCT...GCTCCAAGAAGAAAACATCTCTGGGAAACAGTACCAAAAGGAGTCACTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536545.5
CDS-3UTR CAA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCAGTAGTGGGGATATATaGCATCTCTGGCTAAAAGTG +
Preference number: 5 (lower is better)
Translates to: MKVERPWQYRISGHCSVFSSGDI*HLWLKV
Trigger: CACTTTTAGCCAGAGATGCAATATATCCCCACTACT...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp TCTTCCTATATGAATGCCCGACGTCACAAGTGTGACACGTTTCTTGTTTGCATGCTGCAGTTAAACGTCTaGATACTTTTCTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SSYMNARRHKCDTFLVCMLQLNV*ILFSCK
Trigger: TTTGCAGGAGAAAAGTATCAAGACGTTTAACTGCAG...CATGCAAACAAGAAACGTGTCACACTTGTGACGTCGGGCATTCATATAGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AACACAAACCCCTGCAACAGGGTGGTCCTTCACTTTTCATTTCTCTCTAGATGCGTATTAATGTCCAACTaGCAATCAGTTCTAGCCATA +
Preference number: 5 (lower is better)
Translates to: NTNPCNRVVLHFSFLSRCVLMSN*QSVLAI
Trigger: TATGGCTAGAACTGATTGCAAGTTGGACATTAATAC...GCATCTAGAGAGAAATGAAAAGTGAAGGACCACCCTGTTGCAGGGGTTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAGCTCTCCTGCTTTTCTaGTCTGTAGCCTCAACAGAG +
Preference number: 5 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTALLLF*SVASTE
Trigger: CTCTGTTGAGGCTACAGACAAGAAAAGCAGGAGAGC...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp AATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACATCTTGAGGCAGAGAAGAGATTGAGATaGAAAGTGCCTTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: NSIEVLRISTSLYVHLEAEKRLR*KVPWAV
Trigger: GACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTC...TGCCTCAAGATGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATGAGAAGAGATTGAGATaGAAAGTGCCTTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHEKRLR*KVPWAV
Trigger: GACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTC...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp TCAGCACATCTCTGTATGTACATCTTGAGGCAAACAGCAGAAATACTTCTTTTCGAGAGAGAGAAGAGATaGAGATTGAAAGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SAHLCMYILRQTAEILLFEREKR*RLKVPW
Trigger: CCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTC...GAAAAGAAGTATTTCTGCTGTTTGCCTCAAGATGTACATACAGAGATGTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATGGCTTCTGCTTTCTTTaGAGCTGCTTTAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHGFCFL*SCFRGT
Trigger: AGTCCCTCTAAAGCAGCTCAAAAGAAAGCAGAAGCC...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AGGTTTCTATATCGGAGAAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCTTGGAGCTGGTTCTaGGTAGTAGATTGTCCCATT +
Preference number: 5 (lower is better)
Translates to: RFLYRRKPHIRLIDVMDNSWSWF*VVDCPI
Trigger: AATGGGACAATCTACTACCAAGAACCAGCTCCAAGA...ATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTTCTCCGATATAGAAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354636.7
CDS-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCTTCTGAACAACTTGTaGTGGCCATTTCCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: DSGGNARRELCFSKGDNKLLNNL*WPFPRS
Trigger: AGACCTAGGAAATGGCCACAACAAGTTGTTCAGAAG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGCTTCTTCTGAACAACTaGTTGTGGCCATTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: DSGGNARRELCFSKGDNKLLLNN*LWPFPR
Trigger: CCTAGGAAATGGCCACAACAAGTTGTTCAGAAGAAG...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp ATGAAAGTGGAAAGACCATGGCAATACAGAATAAGTGGTCACTGCAGTGTCTTCGGTTTTGAGTTTCATTaGGCTTCAGTACTAAAAGCC +
Preference number: 5 (lower is better)
Translates to: MKVERPWQYRISGHCSVFGFEFH*ASVLKA
Trigger: GGCTTTTAGTACTGAAGCCAAATGAAACTCAAAACC...GAAGACACTGCAGTGACCACTTATTCTGTATTGCCATGGTCTTTCCACTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp AATTTCAATTGGCAGGACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGGTGACGGACCAGAATTaGAACCCAAGCCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: NFNWQDWLMEFYRSSENQVTDQN*NPSHLN
Trigger: ATTCAGATGGCTTGGGTTCAAATTCTGGTCCGTCAC...CTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTCCTGCCAATTGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAACTCTGCCTCATCCTTaGACTCAAATGCACAGAATT +
Preference number: 5 (lower is better)
Translates to: SSITENTATEVMLVSGIQTLPHP*TQMHRI
Trigger: AATTCTGTGCATTTGAGTCAAAGGATGAGGCAGAGT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAATCTACACTGCAGAGTaGTGTAAGAAATGTGACCAC +
Preference number: 5 (lower is better)
Translates to: SSITENTATEVMLVSGIQIYTAE*CKKCDH
Trigger: GTGGTCACATTTCTTACACAACTCTGCAGTGTAGAT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTACAGAGAGAGAGAAGAGATaGAGATTGAAAGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: WLMEFYRSSENQHISVCTEREKR*RLKVPW
Trigger: CCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTC...TGTACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATGAGAGAGAGAAGAGATaGAGATTGAAAGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHEREKR*RLKVPW
Trigger: CCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTC...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp GACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTAATGCCAAATTTCAATaGGCAGGACTGGCTAATGGA +
Preference number: 5 (lower is better)
Translates to: DWLMEFYRSSENQHISVCNAKFQ*AGLANG
Trigger: TCCATTAGCCAGTCCTGCCAATTGAAATTTGGCATT...ACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp CATGTTAAAAAGTCAGCACACTCACTAGGAGAGAAAGGCATAAAAACTCTACATGGCCAACATGAGCAATaGCTTCCATTTTATGAGCTG +
Preference number: 5 (lower is better)
Translates to: HVKKSAHSLGEKGIKTLHGQHEQ*LPFYEL
Trigger: CAGCTCATAAAATGGAAGCAATTGCTCATGTTGGCC...ATGTAGAGTTTTTATGCCTTTCTCTCCTAGTGAGTGTGCTGACTTTTTAACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp TCTTTTCAAACTGATGAACACCACATGACACCAAATCTCTGCTATTGGAAGAAAGTAAAACTCCTCCTTTaGCAGATGAGGAAACTGGAC +
Preference number: 5 (lower is better)
Translates to: SFQTDEHHMTPNLCYWKKVKLLL*QMRKLD
Trigger: GTCCAGTTTCCTCATCTGCAAAAGGAGGAGTTTTAC...TTTCTTCCAATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAGTTTGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537275.5
CDS-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAACATTCTGTGGTCATTaGCTCAACAAATGTTCAGAC +
Preference number: 5 (lower is better)
Translates to: SSITENTATEVMLVSGIQTFCGH*LNKCSD
Trigger: GTCTGAACATTTGTTGAGCAAATGACCACAGAATGT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp AGTTCCATCACTGAAAATACTGCAACAGAAGTAATGCTGGTCTCTGGGATACAAACTCTCACAGCAAATTaGTCAAGTCCAGAAACACTA +
Preference number: 5 (lower is better)
Translates to: SSITENTATEVMLVSGIQTLTAN*SSPETL
Trigger: TAGTGTTTCTGGACTTGACAAATTTGCTGTGAGAGT...TTGTATCCCAGAGACCAGCATTACTTCTGTTGCAGTATTTTCAGTGATGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp AAAGCCACACATAAGGCTCATAGATGTAATGGACAATTCCTCAAGGTGAAAATAAGAGATGTTTTCTTCTaGGAGCTGGTTCTTGGTAGT +
Preference number: 5 (lower is better)
Translates to: KATHKAHRCNGQFLKVKIRDVFF*ELVLGS
Trigger: ACTACCAAGAACCAGCTCCAAGAAGAAAACATCTCT...TATTTTCACCTTGAGGAATTGTCCATTACATCTATGAGCCTTATGTGTGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354636.7
ENST00000536545.5
CDS-3UTR CAA 90 bp GACTGGCTAATGGAATTCTATAGAAGTTCTGAGAATCAGCACATCTCTGTATGTCTCTGTATGTACATCTaGAGGCAAACAGCAGAAATA +
Preference number: 5 (lower is better)
Translates to: DWLMEFYRSSENQHISVCLCMYI*RQTAEI
Trigger: TATTTCTGCTGTTTGCCTCAAGATGTACATACAGAG...ACATACAGAGATGTGCTGATTCTCAGAACTTCTATAGAATTCCATTAGCCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp TCTTTTCAAACTGATGAACACCACATGACACCAAATCTCTGCTATTGGAAGAAAAATGCCAAATTTCAATaGGCAGGACTGGCTAATGGA +
Preference number: 5 (lower is better)
Translates to: SFQTDEHHMTPNLCYWKKNAKFQ*AGLANG
Trigger: TCCATTAGCCAGTCCTGCCAATTGAAATTTGGCATT...TTTCTTCCAATAGCAGAGATTTGGTGTCATGTGGTGTTCATCAGTTTGAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393578.7
ENST00000537275.5
CDS-3UTR CAA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATTTGAAGACACTTTCCTaGGATCCTTTCATGTGTTTG +
Preference number: 5 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYLKTLS*DPFMCL
Trigger: CAAACACATGAAAGGATCCAAGGAAAGTGTCTTCAA...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATACAAGTTCATTCCTTTaGAAGTCTGGAGGTAGGTCT +
Preference number: 5 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDTSSFL*KSGGRS
Trigger: AGACCTACCTCCAGACTTCAAAAGGAATGAACTTGT...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACACACTGCCATTTTGTTTaGAGCCTAATCCACAGACTT +
Preference number: 5 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTHCHFV*SLIHRL
Trigger: AAGTCTGTGGATTAGGCTCAAAACAAAATGGCAGTG...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GCACAGTTAACAGTAATGTTGAGTTTTAATTCTCTCCATAGCTCCTTTGGTGATAGGCTGTTATGTTTATaGTGCAGAACAGACAGTGAT +
Preference number: 5 (lower is better)
Translates to: AQLTVMLSFNSLHSSFGDRLLCL*CRTDSD
Trigger: ATCACTGTCTGTTCTGCACAATAAACATAACAGCCT...ATCACCAAAGGAGCTATGGAGAGAATTAAAACTCAACATTACTGTTAACTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403681.7
CDS-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGTCTCTCATTGGGAAATaGAAAAGGAGCAGGTTTATA +
Preference number: 5 (lower is better)
Translates to: DSGGNARRELCFSKGDNKSLIGK*KRSRFI
Trigger: TATAAACCTGCTCCTTTTCAATTTCCCAATGAGAGA...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp ATGCATGTACTTGTATACACAAACACAAGTGCGTATGCAGGTGCTGAGATTTATTTCATGTTTTGCCAGTaGGTACTAAACATTTACTGG +
Preference number: 5 (lower is better)
Translates to: MHVLVYTNTSAYAGAEIYFMFCQ*VLNIYW
Trigger: CCAGTAAATGTTTAGTACCAACTGGCAAAACATGAA...ATAAATCTCAGCACCTGCATACGCACTTGTGTTTGTGTATACAAGTACATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACACAGTTAATAATCATTTaGATACGCTTCCTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTQLIII*IRFLCP
Trigger: AGGGCAGAGGAAGCGTATCAAAATGATTATTAACTG...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp GATTCTGGTGGAAATGCTAGGCGGGAATTATGTTTTTCAAAAGGAGACAATAAGTTCTATTACATGATGTaGCAGGCCAGAAATACATAC +
Preference number: 5 (lower is better)
Translates to: DSGGNARRELCFSKGDNKFYYMM*QARNTY
Trigger: GTATGTATTTCTGGCCTGCAACATCATGTAATAGAA...CTTATTGTCTCCTTTTGAAAAACATAATTCCCGCCTAGCATTTCCACCAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACATCTAGATGCATGTACTaGTATACACAAACACAAGTG +
Preference number: 5 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTSRCMY*YTQTQV
Trigger: CACTTGTGTTTGTGTATACAAGTACATGCATCTAGA...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS-3UTR CAA 90 bp TACTTGACATCACTGAACACAGAATTCAGAAGAGATGTTCACTATTTGCTCACAAAAGCCAGTTGCTATTaGTTCCACATTAATTTGGGT +
Preference number: 5 (lower is better)
Translates to: YLTSLNTEFRRDVHYLLTKASCY*FHINLG
Trigger: ACCCAAATTAATGTGGAACAAATAGCAACTGGCTTT...TGTGAGCAAATAGTGAACATCTCTTCTGAATTCTGTGTTCAGTGATGTCAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541363.5
CDS CCA 72 bp GGAGGAGGCGCTGCCGGTGGCGGCGGCGGCGGTGGGTaGGTGCCGGAGGTGGAGGTGGCGGTGGAGGTGGAG +
Preference number: 6 (lower is better)
Translates to: GGGAAGGGGGGG*VPEVEVAVEVE
Trigger: CTCCACCTCCACCGCCACCTCCACCTCCGGCACCCACCCACCGCCGCCGCCGCCACCGGCAGCGCCTCCTCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000541363.5
ENST00000545998.1
CDS TCA 72 bp CTTCTGAGGCGCTGGGGCGGCAGGTTGTCCCTGGGCTaGAGTGGACGGCTGCCCCGCGCCCTCACCGCGTGC +
Preference number: 6 (lower is better)
Translates to: LLRRWGGRLSLG*SGRLPRALTAC
Trigger: GCACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGCCCCAGCGCCTCAGAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354636.7
ENST00000393577.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000541363.5
ENST00000545998.1
CDS GCA 72 bp GGGGCGGCAGGTTGTCCCTGGGCTGAAGTGGACGGCTaGCCCGCGCCCTCACCGCGTGCGCTCATCCTGCCT +
Preference number: 6 (lower is better)
Translates to: GAAGCPWAEVDG*PAPSPRALILP
Trigger: AGGCAGGATGAGCGCACGCGGTGAGGGCGCGGGGCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354636.7
ENST00000393577.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000541363.5
ENST00000545998.1
CDS TCA 72 bp CACCGGAGAGTCGGAGGGGGACGGGCTGCTAGCTCCTaGGTCTTGCACCAAGCGCGCGCTGCCCGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: HRRVGGGRAASS*VLHQARAARAG
Trigger: TCCAGCCCGGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAGCAGCCCGTCCCCCTCCGACTCTCCGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
CDS GCA 72 bp GAGTCGGAGGGGGACGGGCTGCTAGCTCCTGAGTCTTaGACCAAGCGCGCGCTGCCCGGGCTGGAAGTTTTC +
Preference number: 6 (lower is better)
Translates to: ESEGDGLLAPES*TKRALPGLEVF
Trigger: GAAAACTTCCAGCCCGGGCAGCGCGCGCTTGGTGCAAGACTCAGGAGCTAGCAGCCCGTCCCCCTCCGACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
CDS CAA 72 bp GTCGCAGAGGCTCCTCTCGCGGGTTGGGATCAGGAGTaGCGGGCACCGGGAGCACTTCGGAAGCGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: VAEAPLAGWDQE*RAPGALRKRLG
Trigger: TCCAAGCCGCTTCCGAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCCTCTGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000545998.1
CDS GCA 72 bp TCGCAGAGGCTCCTCTCGCGGGTTGGGATCAGGAGTTaGGGGCACCGGGAGCACTTCGGAAGCGGCTTGGAA +
Preference number: 6 (lower is better)
Translates to: SQRLLSRVGIRS*GHREHFGSGLE
Trigger: TTCCAAGCCGCTTCCGAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCCTCTGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000545998.1
CDS CCA 72 bp AGAGGCTTTGAGGTCGCAGAGGCTCCTCTCGCGGGTTaGGATCAGGAGTTGCGGGCACCGGGAGCACTTCGG +
Preference number: 6 (lower is better)
Translates to: RGFEVAEAPLAG*DQELRAPGALR
Trigger: CCGAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCCTCTGCGACCTCAAAGCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000545998.1
CDS CAA 90 bp GGCTTTGAGGTCGCAGAGGCTCCTCTCGCGGGTTGGGATCAGGAGTaGCGGGCACCGGGAGCACTTCGGAAGCGGCTTGGAAAGGGAAGA +
Preference number: 6 (lower is better)
Translates to: GFEVAEAPLAGWDQE*RAPGALRKRLGKGR
Trigger: TCTTCCCTTTCCAAGCCGCTTCCGAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCCTCTGCGACCTCAAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000545998.1
CDS CAA 90 bp GTTGGGATCAGGAGTTGCGGGCACCGGGAGCACTTCGGAAGCGGCTaGGAAAGGGAAGAGACTTGGAGTGAATTGTGTCCCTTGAAATGT +
Preference number: 6 (lower is better)
Translates to: VGIRSCGHREHFGSG*EREETWSELCPLKC
Trigger: ACATTTCAAGGGACACAATTCACTCCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAGTGCTCCCGGTGCCCGCAACTCCTGATCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
ENST00000545998.1
CDS CAA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGATTGAGATaGAAAGTGCCTTGGGCAGTCGGAAAGCAAAGGAGGATGGGGAGA +
Preference number: 6 (lower is better)
Translates to: EREREREREREKRLR*KVPWAVGKQRRMGR
Trigger: TCTCCCCATCCTCCTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
CDS TCA 72 bp CTTCGGAAGCGGCTTGGAAAGGGAAGAGACTTGGAGTaGATTGTGTCCCTTGAAATGTTAGGCGGGGAAAGA +
Preference number: 6 (lower is better)
Translates to: LRKRLGKGRDLE*IVSLEMLGGER
Trigger: TCTTTCCCCGCCTAACATTTCAAGGGACACAATTCACTCCAAGTCTCTTCCCTTTCCAAGCCGCTTCCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
CDS CAA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGATaGAGATTGAAAGTGCCTTGGGCAGTCGGAAAGCAAAGGAGGATG +
Preference number: 6 (lower is better)
Translates to: EREREREREREREKR*RLKVPWAVGKQRRM
Trigger: CATCCTCCTTTGCTTTCCGACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
CDS CAA 72 bp AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGATaGAGATTGAAAGTGCCTTGGGCAGTCGGAAAGCAA +
Preference number: 6 (lower is better)
Translates to: REREREREREKR*RLKVPWAVGKQ
Trigger: TTGCTTTCCGACTGCCCAAGGCACTTTCAATCTCAATCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354636.7
ENST00000393578.7
ENST00000403681.7
ENST00000425208.6
ENST00000536545.5
ENST00000537275.5
ENST00000537429.5
CDS CAA 72 bp ATGTTAAATGTAAGAAATGAGTCTTGTGTTACCCAGTaGGGACAAATTCCTGGCTGCGGAGTTAGAATGGGA +
Preference number: 6 (lower is better)
Translates to: MLNVRNESCVTQ*GQIPGCGVRMG
Trigger: TCCCATTCTAACTCCGCAGCCAGGAATTTGTCCCAACTGGGTAACACAAGACTCATTTCTTACATTTAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545998.1
CDS TCA 72 bp GTTAACTCGCATCTAACTAATGTTAAATGTAAGAAATaGGTCTTGTGTTACCCAGTTGGGACAAATTCCTGG +
Preference number: 6 (lower is better)
Translates to: VNSHLTNVKCKK*VLCYPVGTNSW
Trigger: CCAGGAATTTGTCCCAACTGGGTAACACAAGACTCATTTCTTACATTTAACATTAGTTAGATGCGAGTTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545998.1