RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HMG20A (Homo sapiens)

Ensembl gene IDs: ENSG00000140382

Ensembl transcript IDs: ENST00000336216.9, ENST00000381714.7, ENST00000558176.1, ENST00000558288.1, ENST00000558651.5, ENST00000558845.1, ENST00000559035.5, ENST00000559099.5, ENST00000559728.1, ENST00000560498.5, ENST00000560867.1, ENST00000560986.1

Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCAGTaGTGTGGGGCCCAGACAACGGGCTCTGCTTGCTCTGCCTTTGGT +
Preference number: 1 (lower is better)
Translates to: GHTMRGAALLSTCLQ*CGAQTTGSACSAFG
Trigger: ACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 90 bp CTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTaGCTGCAGTGGTGTGGGGCCCAGACAACGGGCTCTGCTTGCTCT +
Preference number: 1 (lower is better)
Translates to: LTYGHTMRGAALLST*LQWCGAQTTGSACS
Trigger: AGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 90 bp TACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCAGTGGTGTaGGGCCCAGACAACGGGCTCTGCTTGCTCTGCCTTTGGTTCCAA +
Preference number: 1 (lower is better)
Translates to: YYERGRTSIHLPAVV*GPDNGLCLLCLWFQ
Trigger: TTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 90 bp TGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATaGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCA +
Preference number: 1 (lower is better)
Translates to: WCSNMTGSSALCPDL*AYYERGRTSIHLPA
Trigger: TGCAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 90 bp GAGAAGACAGGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATaGCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATC +
Preference number: 1 (lower is better)
Translates to: EKTGWCSNMTGSSAL*PDLWAYYERGRTSI
Trigger: GATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCCTGTCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 90 bp ACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTaGGACTCCATGTCTGTGCAGGAGCAATGCTTAGAAAACAGCAGG +
Preference number: 1 (lower is better)
Translates to: TRHCQQMGTEEPCWG*DSMSVQEQCLENSR
Trigger: CCTGCTGTTTTCTAAGCATTGCTCCTGCACAGACATGGAGTCCCAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 90 bp TGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTaGGGCTGGGACTCCATGTCTGTGCAGGAGCAATGCTTAGAAAAC +
Preference number: 1 (lower is better)
Translates to: CSTRHCQQMGTEEPC*GWDSMSVQEQCLEN
Trigger: GTTTTCTAAGCATTGCTCCTGCACAGACATGGAGTCCCAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 90 bp AAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTaGTGGGGCTGGGACTCCATGTCTGTGCAGGAGCAATGCTTAGAA +
Preference number: 1 (lower is better)
Translates to: KCSTRHCQQMGTEEP*WGWDSMSVQEQCLE
Trigger: TTCTAAGCATTGCTCCTGCACAGACATGGAGTCCCAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR TCA 90 bp ATGTCTGTGCAGGAGCAATGCTTAGAAAACAGCAGGCAGTACCAGTaGGGAAGGAAAGAGCATTCTCCTTTAGGGCAGCAATCACAAAGC +
Preference number: 1 (lower is better)
Translates to: MSVQEQCLENSRQYQ*GRKEHSPLGQQSQS
Trigger: GCTTTGTGATTGCTGCCCTAAAGGAGAATGCTCTTTCCTTCCTCACTGGTACTGCCTGCTGTTTTCTAAGCATTGCTCCTGCACAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 90 bp GCTTCACATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTaGTCCCTCATTTGGCTTCCTGGGGTGATGGCCTTTCACTCACTG +
Preference number: 1 (lower is better)
Translates to: ASHKDNSIGSSYTCC*SLIWLPGVMAFHSL
Trigger: CAGTGAGTGAAAGGCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATGTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 90 bp GATGGCCTTTCACTCACTGATAATTCTTTCACAAGCAAAGGGATCTaGACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGATGG +
Preference number: 1 (lower is better)
Translates to: DGLSLTDNSFTSKGI*TLSLPPLSSNFHGW
Trigger: CCATCCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTTGTGAAAGAATTATCAGTGAGTGAAAGGCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 90 bp AAAGCTTCACATAAGGACAATTCCATAGGAAGCTCATATACATGTTaGTGCTCCCTCATTTGGCTTCCTGGGGTGATGGCCTTTCACTCA +
Preference number: 1 (lower is better)
Translates to: KASHKDNSIGSSYTC*CSLIWLPGVMAFHS
Trigger: TGAGTGAAAGGCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATGTGAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 90 bp TCACTGATAATTCTTTCACAAGCAAAGGGATCTGCACTCTTTCTCTaGCCCCACTCAGTTCAAATTTCCATGGATGGCTTCTCATTCCTC +
Preference number: 1 (lower is better)
Translates to: SLIILSQAKGSALFL*PHSVQISMDGFSFL
Trigger: GAGGAATGAGAAGCCATCCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTTGTGAAAGAATTATCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 90 bp CATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGCTTCCTaGGGTGATGGCCTTTCACTCACTGATAATTCTTTCACAAGCAAA +
Preference number: 1 (lower is better)
Translates to: HRKLIYMLLLPHLAS*GDGLSLTDNSFTSK
Trigger: TTTGCTTGTGAAAGAATTATCAGTGAGTGAAAGGCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 90 bp GACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTaGCTTCCTGGGGTGATGGCCTTTCACTCACTGATAATTCTTTCA +
Preference number: 1 (lower is better)
Translates to: DNSIGSSYTCCCSLI*LPGVMAFHSLIILS
Trigger: TGAAAGAATTATCAGTGAGTGAAAGGCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR TCA 90 bp TTTCCTCAGGAGGCAGTTTACTCCATTCATTGCCTAACATCCTTGTaGTTTCTGGAAATGGGACTTCTGGTCTCTTTGCTCGAAGTTGTT +
Preference number: 1 (lower is better)
Translates to: FPQEAVYSIHCLTSL*FLEMGLLVSLLEVV
Trigger: AACAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGAAATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559035.5
3UTR-3UTR TCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGGAAATGGTAGGAACCTaGAGACCCGGGAGAGTGGCT +
Preference number: 2 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKEMVGT*RPGRVA
Trigger: AGCCACTCTCCCGGGTCTTCAGGTTCCTACCATTTC...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR TCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGGTCACAGCAGGGCAATaGTGGGAGAAGACTGGGCCT +
Preference number: 2 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLVTAGQ*WEKTGP
Trigger: AGGCCCAGTCTTCTCCCATCATTGCCCTGCTGTGAC...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCCACTGAGCACCGTGTaGGGTAGGAAACACAGCCTT +
Preference number: 2 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLPLSTV*GRKHSL
Trigger: AAGGCTGTGTTTCCTACCCCACACGGTGCTCAGTGG...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CAA 90 bp TGCAGTGGTGTGGGGCCCAGACAACGGGCTCTGCTTGCTCTGCCTTaGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: CSGVGPRQRALLALP*VPKISAVTFSLVLC
Trigger: GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGACAAGCAAAGGGATCTaGACTCTTTCTCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLTSKGI*TLSLPP
Trigger: TGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTTGT...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGGGGCTCTGCTTGCTCTaGCTTTGGTTCCAAAGATCT +
Preference number: 2 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLGLCLL*LWFQRS
Trigger: AGATCTTTGGAACCAAAGGCAGAGCAAGCAGAGCCC...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR TCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCAGAAATGGTAGGAACCTaGAGACCCGGGAGAGTGGCT +
Preference number: 2 (lower is better)
Translates to: GWCSNMTGSSALCPDLWAEMVGT*RPGRVA
Trigger: AGCCACTCTCCCGGGTCTTCAGGTTCCTACCATTTC...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCACCAGACAACGGGCTCTaGTTGCTCTGCCTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: GWCSNMTGSSALCPDLWAPDNGL*LLCLWF
Trigger: GAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGG...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCACAGAAGAGCCTTGCTaGGGCTGGGACTCCATGTCT +
Preference number: 2 (lower is better)
Translates to: MTGSSALCPDLWAYYERGTEEPC*GWDSMS
Trigger: AGACATGGAGTCCCAGCCCCAGCAAGGCTCTTCTGT...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCAACAAGCAAAGGGATCTaGACTCTTTCTCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: GWCSNMTGSSALCPDLWATSKGI*TLSLPP
Trigger: TGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTTGT...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CAA 90 bp AAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTaGCTGGGGCTGGGACTCCATGTCTGTGCAGGAGCAATGCTTAGA +
Preference number: 2 (lower is better)
Translates to: KMLHKTLSTDGNRRA*LGLGLHVCAGAMLR
Trigger: TCTAAGCATTGCTCCTGCACAGACATGGAGTCCCAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR TCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGTCCTCTGTTTACAAGTaGCCTTTTCCTCAGCAAAAA +
Preference number: 2 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLSSVYK*PFPQQK
Trigger: TTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGA...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGTCTGCACTCTTTCTCTaGCCCCACTCAGTTCAAATT +
Preference number: 2 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLSALFL*PHSVQI
Trigger: AATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGA...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGGAAGACCCGGGAGAGTaGCTGTACACCTTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLEDPGE*LYTFKA
Trigger: AGCTTTGAAGGTGTACAGCCACTCTCCCGGGTCTTC...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGATGATGGGAGAAGACTaGGCCTGTCCAATGCAAGAA +
Preference number: 2 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLMMGED*ACPMQE
Trigger: TTCTTGCATTGGACAGGCCCAGTCTTCTCCCATCAT...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR TCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGGTCACAGCAGGGCAATaGTGGGAGAAGACTGGGCCT +
Preference number: 2 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKVTAGQ*WEKTGP
Trigger: AGGCCCAGTCTTCTCCCATCATTGCCCTGCTGTGAC...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR TCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGAGCAGGCAGTACCAGTaGGGAAGGAAAGAGCATTCT +
Preference number: 2 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLSRQYQ*GRKEHS
Trigger: AGAATGCTCTTTCCTTCCTCACTGGTACTGCCTGCT...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGACAACGGGCTCTGCTTaGTCTGCCTTTGGTTCCAAA +
Preference number: 2 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLTTGSA*SAFGSK
Trigger: TTTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGT...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGGGTAGTTCTGCCCTATaGCCTGACTTATGGGCATAC +
Preference number: 2 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLGSSAL*PDLWAY
Trigger: GTATGCCCATAAGTCAGGGCATAGGGCAGAACTACC...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCCCTGTCTTCCTCACATaGATTCAGCAGTTAATGGCT +
Preference number: 2 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCPVFLT*IQQLMA
Trigger: AGCCATTAACTGCTGAATCCATGTGAGGAAGACAGG...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp CAAGGTAGCGCTGTTTTTCCTCAGGAGGCAGTTTACTCCATTCATTGCCTAACAGACTTCTGGTCTCTTTaGTCGAAGTTGTTCTCGACG +
Preference number: 2 (lower is better)
Translates to: QGSAVFPQEAVYSIHCLTDFWSL*SKLFST
Trigger: CGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTC...TGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAAACAGCGCTACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559035.5
3UTR-3UTR CCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGTCAAATTTCCATGGATaGCTTCTCATTCCTCACAAG +
Preference number: 2 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLSNFHG*LLIPHK
Trigger: CTTGTGAGGAATGAGAAGCCATCCATGGAAATTTGA...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGTGGAGATGTATAAATTaGTGGGGGCCAAGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLWRCIN*WGPRKA
Trigger: TGCTTTCCTTGGCCCCCACCAATTTATACATCTCCA...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CAA 90 bp GGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTaGGCTTCCTGGGGTGATGGCCTTTCACTCACTGATAATTCTTTC +
Preference number: 2 (lower is better)
Translates to: GQFHRKLIYMLLLPH*ASWGDGLSLTDNSF
Trigger: GAAAGAATTATCAGTGAGTGAAAGGCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR TCA 90 bp CAACCAGTTAGTCCAGAGGTCAGAAAATGGAGATGTATAAATTGGTGGGGGCCAGGTCACCTAGTAAGCTaGAGATATGCAGATCCACTT +
Preference number: 2 (lower is better)
Translates to: QPVSPEVRKWRCINWWGPGHLVS*RYADPL
Trigger: AAGTGGATCTGCATATCTTCAGCTTACTAGGTGACC...TGGCCCCCACCAATTTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTTCTATCCACCTGCCTaGAGTGGTGTGGGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: LEISCIPEYANVSSHCQVFYPPA*SGVGPR
Trigger: TCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAA...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTCAAATTTCCATGGATaGCTTCTCATTCCTCACAAG +
Preference number: 2 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCSNFHG*LLIPHK
Trigger: CTTGTGAGGAATGAGAAGCCATCCATGGAAATTTGA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGTCTGCACTCTTTCTCTaGCCCCACTCAGTTCAAATT +
Preference number: 2 (lower is better)
Translates to: HELGIVLACNFIYCLLTESALFL*PHSVQI
Trigger: AATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGA...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGCCTCATTTGGCTTCCTaGGGTGATGGCCTTTCACTC +
Preference number: 2 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQPHLAS*GDGLSL
Trigger: GAGTGAAAGGCCATCACCCCAGGAAGCCAAATGAGG...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGCCAAGTGATGGTATGTaGGTTTCAGCGCATGGATAT +
Preference number: 2 (lower is better)
Translates to: HELGIVLACNFIYCLLTEPSDGM*VSAHGY
Trigger: ATATCCATGCGCTGAAACCCACATACCATCACTTGG...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGATACTGACAGTTTTGTaGCATCTGAATCCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: HELGIVLACNFIYCLLTEILTVL*HLNPSH
Trigger: GTGGCTGGGATTCAGATGCCACAAAACTGTCAGTAT...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp AGGCCTCTGTTTTCTGATACTGTTCCAGTTCCTTCATGTAACGCTCCTTATCTCTGGAAATGGGACTTCTaGTCTCTTTGCTCGAAGTTG +
Preference number: 2 (lower is better)
Translates to: RPLFSDTVPVPSCNAPYLWKWDF*SLCSKL
Trigger: CAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCA...GAGATAAGGAGCGTTACATGAAGGAACTGGAACAGTATCAGAAAACAGAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559035.5
3UTR-3UTR GCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGTTTCCTCAGCAAAAATaGTCCACAAGACATTGTCAA +
Preference number: 2 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLFPQQK*STRHCQ
Trigger: TTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAA...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGAGATGTATAAATTGGTaGGGGCCAAGGAAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: HELGIVLACNFIYCLLTERCINW*GPRKAK
Trigger: TTTTGCTTTCCTTGGCCCCCACCAATTTATACATCT...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR TCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTCTTATGGGCATACTATaGGAGGGGCCGCACTTCTAT +
Preference number: 2 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCLMGIL*EGPHFY
Trigger: ATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAG...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGATGATGGGAGAAGACTaGGCCTGTCCAATGCAAGAA +
Preference number: 2 (lower is better)
Translates to: LEISCIPEYANVSSHCQVMMGED*ACPMQE
Trigger: TTCTTGCATTGGACAGGCCCAGTCTTCTCCCATCAT...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTGCTTGCTCTGCCTTTaGTTCCAAAGATCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: LEISCIPEYANVSSHCQVCLLCL*FQRSQL
Trigger: CAGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCA...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGAGCTCATATACATGTTaGTGCTCCCTCATTTGGCTT +
Preference number: 2 (lower is better)
Translates to: LEISCIPEYANVSSHCQVSSYTC*CSLIWL
Trigger: AAGCCAAATGAGGGAGCAGCAACATGTATATGAGCT...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR GCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTTCATATACATGTTGCTaGTCCCTCATTTGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCSYTCC*SLIWLP
Trigger: AGGAAGCCAAATGAGGGAGCAGCAACATGTATATGA...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CAA 90 bp GTCTCCAACTTGTTCATCCAATGTAATCCCAGGGTTTTAGTAGTATaGATAAAGTCTGATGACATCTTATTTTTGATGATGTGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: VSNLFIQCNPRVLVV*IKSDDILFLMMCWH
Trigger: ATGCCAGCACATCATCAAAAATAAGATGTCATCAGACTTTATCAATACTACTAAAACCCTGGGATTACATTGGATGAACAAGTTGGAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558845.1
3UTR-3UTR GCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTTTAGCCTTGTGCTCTaGAGTGTCAAAACAAAAACA +
Preference number: 2 (lower is better)
Translates to: LEISCIPEYANVSSHCQVFSLVL*SVKTKT
Trigger: TGTTTTTGTTTTGACACTGCAGAGCACAAGGCTAAA...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 72 bp AGGGGCCGCACTTCTATCCACCTGCCTGCAGTGGTGTaGGGCCCAGACAACGGGCTCTGCTTGCTCTGCCTT +
Preference number: 3 (lower is better)
Translates to: RGRTSIHLPAVV*GPDNGLCLLCL
Trigger: AAGGCAGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGCGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 72 bp GGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTaGCTGCAGTGGTGTGGGGCCCAGACAACGGGCTCT +
Preference number: 3 (lower is better)
Translates to: GHTMRGAALLST*LQWCGAQTTGS
Trigger: AGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 72 bp ATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCAGTaGTGTGGGGCCCAGACAACGGGCTCTGCTTGCTCT +
Preference number: 3 (lower is better)
Translates to: MRGAALLSTCLQ*CGAQTTGSACS
Trigger: AGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGCGGCCCCTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 72 bp CTGCCTGCAGTGGTGTGGGGCCCAGACAACGGGCTCTaGTTGCTCTGCCTTTGGTTCCAAAGATCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: LPAVVWGPDNGL*LLCLWFQRSQL
Trigger: CAGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR TCA 72 bp AGCAATCACAAAGCCACACTGAGGGCTGGCACCCACTaGGCACCGTGTGGGGTAGGAAACACAGCCTTGCTC +
Preference number: 3 (lower is better)
Translates to: SNHKATLRAGTH*APCGVGNTALL
Trigger: GAGCAAGGCTGTGTTTCCTACCCCACACGGTGCTCAGTGGGTGCCAGCCCTCAGTGTGGCTTTGTGATTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CAA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGTTGCTGCTCCCTCATTaGGCTTCCTGGGGTGATGGC +
Preference number: 3 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLLLLPH*ASWGDG
Trigger: GCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAA...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 72 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATaGCCTGACTTATGGGCATACTATGAGAGGGGCCGC +
Preference number: 3 (lower is better)
Translates to: GWCSNMTGSSAL*PDLWAYYERGR
Trigger: GCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 72 bp TGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTaGGACTCCATGTCTGTGCAGGAGCAATGCTTAGAA +
Preference number: 3 (lower is better)
Translates to: CQQMGTEEPCWG*DSMSVQEQCLE
Trigger: TTCTAAGCATTGCTCCTGCACAGACATGGAGTCCCAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 72 bp CTTTGGAGTCACAGCAGGGCAATGATGGGAGAAGACTaGGCCTGTCCAATGCAAGAAACTCTCCTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: LWSHSRAMMGED*ACPMQETLLQN
Trigger: GTTCTGAAGGAGAGTTTCTTGCATTGGACAGGCCCAGTCTTCTCCCATCATTGCCCTGCTGTGACTCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 72 bp AACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATaGGCATACTATGAGAGGGGCCGCACTTCTATCCAC +
Preference number: 3 (lower is better)
Translates to: NMTGSSALCPDL*AYYERGRTSIH
Trigger: GTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CAA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGAAGCTCATATACATGTaGCTGCTCCCTCATTTGGCT +
Preference number: 3 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLKLIYM*LLPHLA
Trigger: AGCCAAATGAGGGAGCAGCAACATGTATATGAGCTT...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CAA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCCTCTCCTTCAGAACCTaGCTGAGCAACCAGTTAGTC +
Preference number: 3 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCLSFRT*LSNQLV
Trigger: GACTAACTGGTTGCTCAGCAAGGTTCTGAAGGAGAG...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR GCA 72 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTaGTGCTCCCTCATTTGGCTTCCTGGGGTGATGGCC +
Preference number: 3 (lower is better)
Translates to: HKDNSIGSSYTC*CSLIWLPGVMA
Trigger: GGCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CAA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGGTTCTAGCTTGGGCTTaGCAGACAAGGAGTCTAAGA +
Preference number: 3 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLVLAWA*QTRSLR
Trigger: TCTTAGACTCCTTGTCTGCAAAGCCCAAGCTAGAAC...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CAA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGTTGCTGCTCCCTCATTaGGCTTCCTGGGGTGATGGC +
Preference number: 3 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQLLLPH*ASWGDG
Trigger: GCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAA...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR TCA 72 bp AGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTaGAGACCCGGGAGAGTGGCTGTACACCTTCAAAGC +
Preference number: 3 (lower is better)
Translates to: RSTLTEMEMVGT*RPGRVAVHLQS
Trigger: GCTTTGAAGGTGTACAGCCACTCTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CCA 72 bp CTCATATACATGTTGCTGCTCCCTCATTTGGCTTCCTaGGGTGATGGCCTTTCACTCACTGATAATTCTTTC +
Preference number: 3 (lower is better)
Translates to: LIYMLLLPHLAS*GDGLSLTDNSF
Trigger: GAAAGAATTATCAGTGAGTGAAAGGCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAACATGTATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CAA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGGTAGGAAACACAGCCTaGCTCCACAGGGCACTGTCA +
Preference number: 3 (lower is better)
Translates to: LEISCIPEYANVSSHCQVVGNTA*LHRALS
Trigger: TGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTAC...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CAA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGGACAACGGGCTCTGCTaGCTCTGCCTTTGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: LEISCIPEYANVSSHCQVDNGLC*LCLWFQ
Trigger: TTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTC...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CAA 90 bp TTTTCCTCAGGAGGCAGTTTACTCCATTCATTGCCTAACATCCTTGTGATTTCTGGACTTCTGGTCTCTTaGCTCGAAGTTGTTCTCGAC +
Preference number: 3 (lower is better)
Translates to: FSSGGSLLHSLPNILVISGLLVS*LEVVLD
Trigger: GTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCC...AGAAATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559035.5
3UTR-3UTR CAA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGAACCTCTCTTTCCTTTaGCTGTTAAAGGAACCAGAA +
Preference number: 3 (lower is better)
Translates to: HELGIVLACNFIYCLLTENLSFL*LLKEPE
Trigger: TTCTGGTTCCTTTAACAGCAAAAGGAAAGAGAGGTT...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR-3UTR CAA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTATGGAGATGTATAAATaGGTGGGGGCCAAGGAAAGC +
Preference number: 3 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCMEMYK*VGAKES
Trigger: GCTTTCCTTGGCCCCCACCAATTTATACATCTCCAT...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGCTGCCTGCAGTGGTGTaGGGCCCAGACAACGGGCTC +
Preference number: 4 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKLPAVV*GPDNGL
Trigger: GAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAG...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGGCACTTCTATCCACCTaGCTGCAGTGGTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKALLST*LQWCGA
Trigger: GGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGC...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGTGCTGGCAAAGCTGCTaGTCAGCACCTGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLCWQSC*SAPAAG
Trigger: CCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCA...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGTTACTGCCTCCTCACTaGGCACAGAGGAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKLLPPH*AQRREE
Trigger: CTCCTCTCTCCTCTGTGCTCAGTGAGGAGGCAGTAA...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCTGCCTGCAGTGGTGTaGGGCCCAGACAACGGGCTC +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGLPAVV*GPDNGL
Trigger: GAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAG...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGGCTGTAAGACTGTGTTaGGGCTCCGCTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLAVRLC*GSAPGS
Trigger: TGATCCAGGAGCGGAGCCGCAACACAGTCTTACAGC...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGGCATGCTGGCAAAGCTaGTGGTCAGCACCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLACWQS*WSAPAA
Trigger: TGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCATGC...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCCTGGGTTTTCCTACTaGAGACCTTGTAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLPGFSY*RPCRPL
Trigger: CAGAGGCCTACAAGGTCTTCAGTAGGAAAACCCAGG...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGAGCAGGCAGTACCAGTaGGGAAGGAAAGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKSRQYQ*GRKEHS
Trigger: AGAATGCTCTTTCCTTCCTCACTGGTACTGCCTGCT...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGACTCCATGTTGGATTTaGGAAGCTGGCGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLTPCWI*EAGGAL
Trigger: CAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGT...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGGGTAGTTCTGCCCTATaGCCTGACTTATGGGCATAC +
Preference number: 4 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKGSSAL*PDLWAY
Trigger: GTATGCCCATAAGTCAGGGCATAGGGCAGAACTACC...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGGAAGACCCGGGAGAGTaGCTGTACACCTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLEDPGE*LYTFKA
Trigger: AGCTTTGAAGGTGTACAGCCACTCTCCCGGGTCTTC...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCGCCACCAGAGGCAGGTaGGTAGCTACTGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGATRGR*VATGKD
Trigger: GTCTTTCCCAGTAGCTACTCACCTGCCTCTGGTGGC...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGCTGCTGGTCAGCACCTaGCGCAGGGTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTRELLVST*RRVSRC
Trigger: GCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAG...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGACTGGGCCTGTCCAATaGAAGAAACTCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKTGPVQ*KKLSFR
Trigger: TCTGAAGGAGAGTTTCTTGCATTGGACAGGCCCAGT...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATTCTATCCACCTGCCTaGAGTGGTGTGGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GWCSNMTGSSALCPDLWAFYPPA*SGVGPR
Trigger: TCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAA...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTTGCGGCTCCGCTCCTaGATCACATCCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCLRLRS*ITSTSS
Trigger: GCTGGAGGTGGATGTGATCCAGGAGCGGAGCCGCAA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGTCCACCTGCCTGCAGTaGTGTGGGGCCCAGACAACG +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWSTCLQ*CGAQTT
Trigger: CGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGA...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CAA 72 bp GTGGGGCCCAGACAACGGGCTCTGCTTGCTCTGCCTTaGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: VGPRQRALLALP*VPKISAVTFSL
Trigger: AAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGGGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTTTCCATCTCTCTGCTaGCGACAGGGGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCFPSLC*RQGQEG
Trigger: CCCTTCCTGCCCCTGTCGTCAGCAGAGAGATGGAAA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336216.9
CDS-3UTR TCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGGAAATGGTAGGAACCTaGAGACCCGGGAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLEMVGT*RPGRVA
Trigger: AGCCACTCTCCCGGGTCTTCAGGTTCCTACCATTTC...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCAGTTTTGTGGCATCTaGATCCCAGCCACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGQFCGI*IPATRG
Trigger: GCCTCTGGTGGCTGGGATTCAGATGCCACAAAACTG...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCTTACTGCCTCCTCACTaGGCACAGAGGAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGLLPPH*AQRREE
Trigger: CTCCTCTCTCCTCTGTGCTCAGTGAGGAGGCAGTAA...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCTCCTTATCTCTGTCTaGTTCATCAAGGTAGCGCTG +
Preference number: 4 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLLLISV*FIKVAL
Trigger: CAGCGCTACCTTGATGAAGCAGACAGAGATAAGGAG...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCTCTCCACGTGCTTTTaGAGGGCTGCATTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGLSTCF*RAAFLS
Trigger: GGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAG...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTTCTATCCACCTGCCTaGAGTGGTGTGGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCFYPPA*SGVGPR
Trigger: TCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGTCTCATGATCATGAGTaGCCTGCCGGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLSHDHE*PAGLHL
Trigger: AAGATGCAGCCCGGCAGGCCACTCATGATCATGAGA...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGTTGCGGCTCCGCTCCTaGATCACATCCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWLRLRS*ITSTSS
Trigger: GCTGGAGGTGGATGTGATCCAGGAGCGGAGCCGCAA...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGGAAGACCCGGGAGAGTaGCTGTACACCTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLEDPGE*LYTFKA
Trigger: AGCTTTGAAGGTGTACAGCCACTCTCCCGGGTCTTC...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGTGGAGATGTATAAATTaGTGGGGGCCAAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKWRCIN*WGPRKA
Trigger: TGCTTTCCTTGGCCCCCACCAATTTATACATCTCCA...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCCACTGAGCACCGTGTaGGGTAGGAAACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGPLSTV*GRKHSL
Trigger: AAGGCTGTGTTTCCTACCCCACACGGTGCTCAGTGG...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGTCGTCGTCTCACAGCTaGACAAAAATTCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLSSSHS*TKILPQ
Trigger: CTGCGGAAGAATTTTTGTCCAGCTGTGAGACGACGA...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381714.7
CDS-3UTR TCA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGTGGATTGTTGGTGGATaGTGTGGCGCCACTACTGTA +
Preference number: 4 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLWIVGG*CGATTV
Trigger: TACAGTAGTGGCGCCACATCATCCACCAACAATCCA...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGATCACAAAGCCACACTaGGGGCTGGCACCCACTGAG +
Preference number: 4 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLITKPH*GLAPTE
Trigger: CTCAGTGGGTGCCAGCCCTCAGTGTGGCTTTGTGAT...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGATCACAAAGCCACACTaGGGGCTGGCACCCACTGAG +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWITKPH*GLAPTE
Trigger: CTCAGTGGGTGCCAGCCCTCAGTGTGGCTTTGTGAT...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCCAGTTTTGTGGCATCTaGATCCCAGCCACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCQFCGI*IPATRG
Trigger: GCCTCTGGTGGCTGGGATTCAGATGCCACAAAACTG...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCAACTCCATGTTGGATTTaGGAAGCTGGCGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GWCSNMTGSSALCPDLWATPCWI*EAGGAL
Trigger: CAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGT...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGCTGCTGGTCAGCACCTaGCGCAGGGTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWLLVST*RRVSRC
Trigger: GCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAG...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGCATCCTTGTGATTTCTaGAAATGGGACTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKHPCDF*KWDFWS
Trigger: AGACCAGAAGTCCCATTTCCAGAAATCACAAGGATG...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTTGGATTTGCGAAGCTaGCGGAGCTCTGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCLDLRS*RSSASR
Trigger: TCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGCCTCATTTGGCTTCCTaGGGTGATGGCCTTTCACTC +
Preference number: 4 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLPHLAS*GDGLSL
Trigger: GAGTGAAAGGCCATCACCCCAGGAAGCCAAATGAGG...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGGAGCCTTGCTGGGGCTaGGACTCCATGTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTREEPCWG*DSMSVQ
Trigger: CTGCACAGACATGGAGTCCCAGCCCCAGCAAGGCTC...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATGGATTGTTGGTGGATaGTGTGGCGCCACTACTGTA +
Preference number: 4 (lower is better)
Translates to: GWCSNMTGSSALCPDLWAWIVGG*CGATTV
Trigger: TACAGTAGTGGCGCCACATCATCCACCAACAATCCA...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCAGCAGGCAGTACCAGTaGGGAAGGAAAGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGSRQYQ*GRKEHS
Trigger: AGAATGCTCTTTCCTTCCTCACTGGTACTGCCTGCT...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGGGAAGACAAAGGACATaGGAATTCTTCCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKGRQRT*EFFLAF
Trigger: AAAAGCAAGGAAGAATTCTCATGTCCTTTGTCTTCC...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCAGTGCTTTTGCAGGGCTaGATTCCTCTCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: GWCSNMTGSSALCPDLWAVLLQG*IPLLKL
Trigger: GAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCAC...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGAGGGTCTCCAGGTGCTaGTGTAAGACTGTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLRVSRC*CKTVLR
Trigger: CCGCAACACAGTCTTACAGCAGCACCTGGAGACCCT...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGCGCAGGGTCTCCAGGTaGTGCTGTAAGACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWRRVSR*CCKTVL
Trigger: CAACACAGTCTTACAGCAGCACCTGGAGACCCTGCG...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTCTCATGATCATGAGTaGCCTGCCGGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCSHDHE*PAGLHL
Trigger: AAGATGCAGCCCGGCAGGCCACTCATGATCATGAGA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGTTGGATTTGCGAAGCTaGCGGAGCTCTGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWLDLRS*RSSASR
Trigger: TCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAA...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGCCTCAAACTCCATGTTaGATTTGCGAAGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLPQTPC*ICEAGG
Trigger: TCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGG...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGTCCACCTGCCTGCAGTaGTGTGGGGCCCAGACAACG +
Preference number: 4 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWSTCLQ*CGAQTT
Trigger: CGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGA...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCACTCCTTATCTCTGTCTaGTTCATCAAGGTAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GWCSNMTGSSALCPDLWALLISV*FIKVAL
Trigger: CAGCGCTACCTTGATGAAGCAGACAGAGATAAGGAG...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGGCTTCTCCACTGCTGTaGGCATGCTCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: HELGIVLACNFIYCLLTEASPLL*ACSPRA
Trigger: AGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGC...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGGCTGTAAGACTGTGTTaGGGCTCCGCTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTREAVRLC*GSAPGS
Trigger: TGATCCAGGAGCGGAGCCGCAACACAGTCTTACAGC...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCAACTGGGCCTGTCCAATaGAAGAAACTCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GWCSNMTGSSALCPDLWATGPVQ*KKLSFR
Trigger: TCTGAAGGAGAGTTTCTTGCATTGGACAGGCCCAGT...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGGCACTTCTATCCACCTaGCTGCAGTGGTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKALLST*LQWCGA
Trigger: GGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGC...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCACAAATTCTGGATTGTTaGTGGATGATGTGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GWCSNMTGSSALCPDLWAQILDC*WMMWRH
Trigger: GTGGCGCCACATCATCCACCAACAATCCAGAATTTG...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGCAGGCAAGGGCATGCTaGCAAAGCTGCTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HELGIVLACNFIYCLLTEQARAC*QSCWSA
Trigger: TGCTGACCAGCAGCTTTGCCAGCATGCCCTTGCCTG...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp GCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAGGGCAGGCAAGGGCATGCTaGCAAAGCTGCTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ATGILTKSPTCSSNVIPGQARAC*QSCWSA
Trigger: TGCTGACCAGCAGCTTTGCCAGCATGCCCTTGCCTG...CCCTGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR CCA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGACTTATGGAACATCTTaGAGTTCTAAGACCATTCCC +
Preference number: 4 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLTYGTS*SSKTIP
Trigger: GGGAATGGTCTTAGAACTCCAAGATGTTCCATAAGT...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCAGGTGAGTAGCTACTaGGAAAGACAGCATTTCAGA +
Preference number: 4 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLQVSSY*ERQHFR
Trigger: TCTGAAATGCTGTCTTTCCCAGTAGCTACTCACCTG...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCGAGGTGGCACAGACCTaGTCTATAGATACTGACAGT +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGEVAQT*SIDTDS
Trigger: ACTGTCAGTATCTATAGACCAGGTCTGTGCCACCTC...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp GGCAGTTTACTCCATTCATTGCCTAACATCCTTGTGATTTCTGGAAATGGGACTTTTCCATCTCTCTGCTaGCGACAGGGGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSLLHSLPNILVISGNGTFPSLC*RQGQEG
Trigger: CCCTTCCTGCCCCTGTCGTCAGCAGAGAGATGGAAA...AGTCCCATTTCCAGAAATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR TCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGTATGGAACCTCTGGGTaGTTTAACCCAGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWYGTSG*FNPVVA
Trigger: GGCTACCACTGGGTTAAATCACCCAGAGGTTCCATA...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACGTCACAGCAGGGCAATaGTGGGAGAAGACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDVTAGQ*WEKTGP
Trigger: AGGCCCAGTCTTCTCCCATCATTGCCCTGCTGTGAC...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACGCCACCAGAGGCAGGTaGGTAGCTACTGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDATRGR*VATGKD
Trigger: GTCTTTCCCAGTAGCTACTCACCTGCCTCTGGTGGC...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGCATGCCTCTGTTCATTaGCTTCTGCTGCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLHASVH*LLLHLK
Trigger: CTTCAAATGCAGCAGAAGGCAATGAACAGAGGCATG...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGCTTGCCTATGAGATTTaGCTTTCTGACGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWLAYEI*LSDGPG
Trigger: CCCAGGACCGTCAGAAAGGCAAATCTCATAGGCAAG...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCTGCTTCCCGAGCTTTaGTATGGTTCAAGAATTCCT +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGLLPEL*YGSRIP
Trigger: AGGAATTCTTGAACCATAGCAAAGCTCGGGAAGCAG...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAGGGCTCTCCACGTGCTTTTaGAGGGCTGCATTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ATGILTKSPTCSSNVIPGLSTCF*RAAFLS
Trigger: GGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAG...CCCTGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGCGCATGCTCTCCACGTaGTTTTGCAGGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: HELGIVLACNFIYCLLTERMLST*FCRAAF
Trigger: GAATGCAGCCCTGCAAAAGCACGTGGAGAGCATGCG...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGGCTTCTCCACTGCTGTaGGCATGCTCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKASPLL*ACSPRA
Trigger: AGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGC...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAGGGGCTGTAAGACTGTGTTaGGGCTCCGCTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: ATGILTKSPTCSSNVIPGAVRLC*GSAPGS
Trigger: TGATCCAGGAGCGGAGCCGCAACACAGTCTTACAGC...CCCTGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp GCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAGGGAGGGTCTCCAGGTGCTaGTGTAAGACTGTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: ATGILTKSPTCSSNVIPGRVSRC*CKTVLR
Trigger: CCGCAACACAGTCTTACAGCAGCACCTGGAGACCCT...CCCTGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp TTTAACAACCATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATCTGCTGGTCAGCACCTaGCGCAGGGTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FNNHATGILTKSPTCSSNLLVST*RRVSRC
Trigger: GCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAG...ATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATGGTTGTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR CCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCTGGAAATGGGACTTCTaGTCTCTTTGCTCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGWKWDF*SLCSKL
Trigger: CAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCA...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGCCTCAAACTCCATGTTaGATTTGCGAAGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWPQTPC*ICEAGG
Trigger: TCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGG...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGCAGGCAAGGGCATGCTaGCAAAGCTGCTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKQARAC*QSCWSA
Trigger: TGCTGACCAGCAGCTTTGCCAGCATGCCCTTGCCTG...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGACAGAAGAGCCTTGCTaGGGCTGGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: HELGIVLACNFIYCLLTETEEPC*GWDSMS
Trigger: AGACATGGAGTCCCAGCCCCAGCAAGGCTCTTCTGT...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGCCTGTCTTCCTCACATaGATTCAGCAGTTAATGGCT +
Preference number: 4 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLPVFLT*IQQLMA
Trigger: AGCCATTAACTGCTGAATCCATGTGAGGAAGACAGG...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCAACAAAACTCCAGAATaGGCTCTGGATGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGNKTPE*ALDVLL
Trigger: CAGAAGGACATCCAGAGCCCATTCTGGAGTTTTGTT...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGCAGGTGAGTAGCTACTaGGAAAGACAGCATTTCAGA +
Preference number: 4 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLQVSSY*ERQHFR
Trigger: TCTGAAATGCTGTCTTTCCCAGTAGCTACTCACCTG...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCATACTGACAGTTTTGTaGCATCTGAATCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGILTVL*HLNPSH
Trigger: GTGGCTGGGATTCAGATGCCACAAAACTGTCAGTAT...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CAA 72 bp CATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTaGGCTTCCTGGGGTGATGGCCTTTCACTCACTGAT +
Preference number: 4 (lower is better)
Translates to: HRKLIYMLLLPH*ASWGDGLSLTD
Trigger: ATCAGTGAGTGAAAGGCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
3UTR CAA 72 bp GTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACATaGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VTFSSAKMLHKT*STDGNRRALLG
Trigger: CCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGTATGGAACCTCTGGGTaGTTTAACCCAGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTREYGTSG*FNPVVA
Trigger: GGCTACCACTGGGTTAAATCACCCAGAGGTTCCATA...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp AGCGCTGTTTTTCCTCAGGAGGCAGTTTACTCCATTCATTGCCTAACATCCTTGTATGGAACCTCTGGGTaGTTTAACCCAGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SAVFPQEAVYSIHCLTSLYGTSG*FNPVVA
Trigger: GGCTACCACTGGGTTAAATCACCCAGAGGTTCCATA...CAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAAACAGCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR TCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGCAGTCTGTTCATATATaGGTCAATGGTGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLQSVHI*VNGVHC
Trigger: ACAGTGGACACCATTGACTCATATATGAACAGACTG...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCGTGTACTGGGAAACATaGGTTAGGTATTGTGCTAGC +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCVYWET*VRYCAS
Trigger: GCTAGCACAATACCTAACTCATGTTTCCCAGTACAC...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGGACTTCTGGTCTCTTTaGTCGAAGTTGTTCTCGACG +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWDFWSL*SKLFST
Trigger: CGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTC...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGCTCTCCACGTGCTTTTaGAGGGCTGCATTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWLSTCF*RAAFLS
Trigger: GGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAG...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGGCATGCTGGCAAAGCTaGTGGTCAGCACCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQACWQS*WSAPAA
Trigger: TGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCATGC...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTCTGCACTCTTTCTCTaGCCCCACTCAGTTCAAATT +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCSALFL*PHSVQI
Trigger: AATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGACAAGCAAAGGGATCTaGACTCTTTCTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTRETSKGI*TLSLPP
Trigger: TGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTTGT...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCTCATATACATGTTGCTaGTCCCTCATTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGSYTCC*SLIWLP
Trigger: AGGAAGCCAAATGAGGGAGCAGCAACATGTATATGA...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGGGGCTCTGCTTGCTCTaGCTTTGGTTCCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTREGLCLL*LWFQRS
Trigger: AGATCTTTGGAACCAAAGGCAGAGCAAGCAGAGCCC...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATGTAACTTCATTTACTaGCTCCTCACTGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: GWCSNMTGSSALCPDLWACNFIY*LLTEHR
Trigger: TCTGTGCTCAGTGAGGAGGCAGTAAATGAAGTTACA...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGGATCATTACTCTCCTTaGAACCGTCTTCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLDHYSP*NRLHLQ
Trigger: TTGCAGATGAAGACGGTTCCAAGGAGAGTAATGATC...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCTCCCGAGCTTTGCTATaGTTCAAGAATTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: MTGSSALCPDLWAYYERGSRALL*FKNSSV
Trigger: TACAGAGGAATTCTTGAACCATAGCAAAGCTCGGGA...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp TTTAACAACCATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATTGCTGGCAAAGCTGCTaGTCAGCACCTGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: FNNHATGILTKSPTCSSNCWQSC*SAPAAG
Trigger: CCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCA...ATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATGGTTGTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR CCA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGCCACTGAGCACCGTGTaGGGTAGGAAACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWPLSTV*GRKHSL
Trigger: AAGGCTGTGTTTCCTACCCCACACGGTGCTCAGTGG...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGTGCTTGCTCTGCCTTTaGTTCCAAAGATCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWCLLCL*FQRSQL
Trigger: CAGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCA...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGCTATGCCCTGACTTATaGGCATACTATGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTRELCPDL*AYYERG
Trigger: GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CAACCAGTTAGTCCAGAGGTCAGAAAATGGAGATGTATAAATTGGTGGGGGCCACTCCAGAATGGGCTCTaGATGTCCTTCTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: QPVSPEVRKWRCINWWGPLQNGL*MSFCHR
Trigger: TCTATGGCAGAAGGACATCCAGAGCCCATTCTGGAG...TGGCCCCCACCAATTTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp AGGCCTCTGTTTTCTGATACTGTTCCAGTTCCTTCATGTAACGCTCCTTATCTCTGGATTGTTGGTGGATaGTGTGGCGCCACTACTGTA +
Preference number: 4 (lower is better)
Translates to: RPLFSDTVPVPSCNAPYLWIVGG*CGATTV
Trigger: TACAGTAGTGGCGCCACATCATCCACCAACAATCCA...GAGATAAGGAGCGTTACATGAAGGAACTGGAACAGTATCAGAAAACAGAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR GCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGGACTTCTGGTCTCTTTaGTCGAAGTTGTTCTCGACG +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTREDFWSL*SKLFST
Trigger: CGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTC...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCACGCATGCTCTCCACGTaGTTTTGCAGGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: HATGILTKSPTCSSNVIPRMLST*FCRAAF
Trigger: GAATGCAGCCCTGCAAAAGCACGTGGAGAGCATGCG...TGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp CATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCACGCAGGGTCTCCAGGTaGTGCTGTAAGACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: HATGILTKSPTCSSNVIPRRVSR*CCKTVL
Trigger: CAACACAGTCTTACAGCAGCACCTGGAGACCCTGCG...TGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp AATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAGGGTTTTAGTAGCATGCTGGCAAAGCTaGTGGTCAGCACCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: NLNQVSNLFIQCNPRVLVACWQS*WSAPAA
Trigger: TGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCATGC...TACTAAAACCCTGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGACAACGGGCTCTGCTTaGTCTGCCTTTGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HELGIVLACNFIYCLLTETTGSA*SAFGSK
Trigger: TTTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGT...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGATTCTGGATTGTTGGTaGATGATGTGGCGCCACTAC +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTREILDCW*MMWRHY
Trigger: GTAGTGGCGCCACATCATCCACCAACAATCCAGAAT...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CAACCAGTTAGTCCAGAGGTCAGAAAATGGAGATGTATAAATTGGTGGGGGCCAATTCTGGATTGTTGGTaGATGATGTGGCGCCACTAC +
Preference number: 4 (lower is better)
Translates to: QPVSPEVRKWRCINWWGPILDCW*MMWRHY
Trigger: GTAGTGGCGCCACATCATCCACCAACAATCCAGAAT...TGGCCCCCACCAATTTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CAAGGTAGCGCTGTTTTTCCTCAGGAGGCAGTTTACTCCATTCATTGCCTAACACAAATTCTGGATTGTTaGTGGATGATGTGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: QGSAVFPQEAVYSIHCLTQILDC*WMMWRH
Trigger: GTGGCGCCACATCATCCACCAACAATCCAGAATTTG...TGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAAACAGCGCTACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGTCCTCTTTCTTCCTTTaGACCAACCTCCTCGTTTAC +
Preference number: 4 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLSSFFL*TNLLVY
Trigger: GTAAACGAGGAGGTTGGTCCAAAGGAAGAAAGAGGA...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGTGGAAATGGGACTTCTaGTCTCTTTGCTCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLWKWDF*SLCSKL
Trigger: CAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCA...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCATTGGATTTGCGAAGCTaGCGGAGCTCTGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: HATGILTKSPTCSSNVIPLDLRS*RSSASR
Trigger: TCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAA...TGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR CCA 90 bp AATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAGGGTTTTAGTATTGCGGCTCCGCTCCTaGATCACATCCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLNQVSNLFIQCNPRVLVLRLRS*ITSTSS
Trigger: GCTGGAGGTGGATGTGATCCAGGAGCGGAGCCGCAA...TACTAAAACCCTGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR CCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTTGCTGGCAAAGCTGCTaGTCAGCACCTGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCCWQSC*SAPAAG
Trigger: CCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCA...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGGAGCCTTGCTGGGGCTaGGACTCCATGTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LEISCIPEYANVSSHCQVEPCWG*DSMSVQ
Trigger: CTGCACAGACATGGAGTCCCAGCCCCAGCAAGGCTC...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGCCTGTCTTCCTCACATaGATTCAGCAGTTAATGGCT +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWPVFLT*IQQLMA
Trigger: AGCCATTAACTGCTGAATCCATGTGAGGAAGACAGG...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGTGCTTGCTCTGCCTTTaGTTCCAAAGATCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTRECLLCL*FQRSQL
Trigger: CAGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCA...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGCCAAGTGATGGTATGTaGGTTTCAGCGCATGGATAT +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWPSDGM*VSAHGY
Trigger: ATATCCATGCGCTGAAACCCACATACCATCACTTGG...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGAACAAAACTCCAGAATaGGCTCTGGATGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWNKTPE*ALDVLL
Trigger: CAGAAGGACATCCAGAGCCCATTCTGGAGTTTTGTT...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGGTCACAGCAGGGCAATaGTGGGAGAAGACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LEISCIPEYANVSSHCQVVTAGQ*WEKTGP
Trigger: AGGCCCAGTCTTCTCCCATCATTGCCCTGCTGTGAC...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTCCTCTGTTTACAAGTaGCCTTTTCCTCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCSSVYK*PFPQQK
Trigger: TTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACCTTATGGGCATACTATaGGAGGGGCCGCACTTCTAT +
Preference number: 4 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDLMGIL*EGPHFY
Trigger: ATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAG...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGGTGTACTGGGAAACATaGGTTAGGTATTGTGCTAGC +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTREVYWET*VRYCAS
Trigger: GCTAGCACAATACCTAACTCATGTTTCCCAGTACAC...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp CCTTCATGTAACGCTCCTTATCTCTGTCTGCTTCATCAAGGTAGCGCTGTTTTTCTCGACGCTCATTCATaGACCGAACATATCCTCATC +
Preference number: 4 (lower is better)
Translates to: PSCNAPYLCLLHQGSAVFLDAHS*TEHILI
Trigger: GATGAGGATATGTTCGGTTCATGAATGAGCGTCGAG...AAAAACAGCGCTACCTTGATGAAGCAGACAGAGATAAGGAGCGTTACATGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR GCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGGGGATTTGGGTGCATTaGTGTCTCGAAGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: HELGIVLACNFIYCLLTEGIWVH*CLEEVS
Trigger: AGAAACCTCTTCGAGACAGCAATGCACCCAAATCCC...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp AGGCCTCTGTTTTCTGATACTGTTCCAGTTCCTTCATGTAACGCTCCTTATCTCCTCCTTATCTCTGTCTaGTTCATCAAGGTAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RPLFSDTVPVPSCNAPYLLLISV*FIKVAL
Trigger: CAGCGCTACCTTGATGAAGCAGACAGAGATAAGGAG...GAGATAAGGAGCGTTACATGAAGGAACTGGAACAGTATCAGAAAACAGAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR GCA 90 bp AATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAGGGTTTTAGTAGCTTCTCCACTGCTGTaGGCATGCTCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: NLNQVSNLFIQCNPRVLVASPLL*ACSPRA
Trigger: AGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGC...TACTAAAACCCTGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACACAAGCAAAGGGATCTaGACTCTTTCTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDTSKGI*TLSLPP
Trigger: TGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTTGT...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGTTTAGCCTTGTGCTCTaGAGTGTCAAAACAAAAACA +
Preference number: 4 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLFSLVL*SVKTKT
Trigger: TGTTTTTGTTTTGACACTGCAGAGCACAAGGCTAAA...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CCTTGTGATTTCTGGAAATGGGACTTCTGGTCTCTTTGCTCGAAGTTGTTCTCGTGGAAATGGGACTTCTaGTCTCTTTGCTCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PCDFWKWDFWSLCSKLFSWKWDF*SLCSKL
Trigger: CAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCA...CGAGAACAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGAAATCACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGTCCCGAGCTTTGCTATaGTTCAAGAATTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLSRALL*FKNSSV
Trigger: TACAGAGGAATTCTTGAACCATAGCAAAGCTCGGGA...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCAGATGTATAAATTGGTaGGGGCCAAGGAAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCRCINW*GPRKAK
Trigger: TTTTGCTTTCCTTGGCCCCCACCAATTTATACATCT...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGCTCCAGAATGGGCTCTaGATGTCCTTCTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWLQNGL*MSFCHR
Trigger: TCTATGGCAGAAGGACATCCAGAGCCCATTCTGGAG...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGCCTGGGTTTTCCTACTaGAGACCTTGTAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQPGFSY*RPCRPL
Trigger: CAGAGGCCTACAAGGTCTTCAGTAGGAAAACCCAGG...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGGGAAGACAAAGGACATaGGAATTCTTCCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLGRQRT*EFFLAF
Trigger: AAAAGCAAGGAAGAATTCTCATGTCCTTTGTCTTCC...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACTTCTGCCATAGACAGTaGGTTCTAGCTTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDFCHRQ*VLAWAL
Trigger: CAAAGCCCAAGCTAGAACTCACTGTCTATGGCAGAA...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGTTCTGCCATAGACAGTaGGTTCTAGCTTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKFCHRQ*VLAWAL
Trigger: CAAAGCCCAAGCTAGAACTCACTGTCTATGGCAGAA...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGAAGCTGGCGGAGCTCTaGTTCCCGAGCTTTGCTATG +
Preference number: 4 (lower is better)
Translates to: LEISCIPEYANVSSHCQVKLAEL*FPSFAM
Trigger: CATAGCAAAGCTCGGGAAGCAGAGCTCCGCCAGCTT...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGCCACTGCTGTGCGCATaGTCTCCACGTGCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LEISCIPEYANVSSHCQVPLLCA*SPRAFA
Trigger: TGCAAAAGCACGTGGAGAGCATGCGCACAGCAGTGG...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp TTTAACAACCATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATCCACTGCTGTGCGCATaGTCTCCACGTGCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: FNNHATGILTKSPTCSSNPLLCA*SPRAFA
Trigger: TGCAAAAGCACGTGGAGAGCATGCGCACAGCAGTGG...ATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATGGTTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGTCATATACATGTTGCTaGTCCCTCATTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTRESYTCC*SLIWLP
Trigger: AGGAAGCCAAATGAGGGAGCAGCAACATGTATATGA...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CAACCAGTTAGTCCAGAGGTCAGAAAATGGAGATGTATAAATTGGTGGGGGCCAAGCTCATATACATGTTaGTGCTCCCTCATTTGGCTT +
Preference number: 4 (lower is better)
Translates to: QPVSPEVRKWRCINWWGPSSYTC*CSLIWL
Trigger: AAGCCAAATGAGGGAGCAGCAACATGTATATGAGCT...TGGCCCCCACCAATTTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTTTCCTCAGCAAAAATaGTCCACAAGACATTGTCAA +
Preference number: 4 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCFPQQK*STRHCQ
Trigger: TTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGTGTTGGTGGATGATGTaGCGCCACTACTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWCWWMM*RHYCME
Trigger: TTCCATACAGTAGTGGCGCCACATCATCCACCAACA...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGTGTTGGTGGATGATGTaGCGCCACTACTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKCWWMM*RHYCME
Trigger: TTCCATACAGTAGTGGCGCCACATCATCCACCAACA...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGTGGAGATGTATAAATTaGTGGGGGCCAAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: HELGIVLACNFIYCLLTEWRCIN*WGPRKA
Trigger: TGCTTTCCTTGGCCCCCACCAATTTATACATCTCCA...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGGAGGTGGCACAGACCTaGTCTATAGATACTGACAGT +
Preference number: 4 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKEVAQT*SIDTDS
Trigger: ACTGTCAGTATCTATAGACCAGGTCTGTGCCACCTC...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CAACCAGTTAGTCCAGAGGTCAGAAAATGGAGATGTATAAATTGGTGGGGGCCAAACCAAGATGGTGTATaGTGTCAAGTGATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: QPVSPEVRKWRCINWWGPNQDGV*CQVMCS
Trigger: GCTACACATCACTTGACACCATACACCATCTTGGTT...TGGCCCCCACCAATTTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381714.7
3UTR CAA 72 bp CGCTGTTTTTCCTCAGGAGGCAGTTTACTCCATTCATaGCCTAACATCCTTGTGATTTCTGGAAATGGGACT +
Preference number: 4 (lower is better)
Translates to: RCFSSGGSLLHS*PNILVISGNGT
Trigger: AGTCCCATTTCCAGAAATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAAACAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR TCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGCAGTCTGTTCATATATaGGTCAATGGTGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: HELGIVLACNFIYCLLTEQSVHI*VNGVHC
Trigger: ACAGTGGACACCATTGACTCATATATGAACAGACTG...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGGGTCACCTAGTAAGCTaGAGATATGCAGATCCACTT +
Preference number: 4 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKGHLVS*RYADPL
Trigger: AAGTGGATCTGCATATCTTCAGCTTACTAGGTGACC...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGGTGTATGGTGTCAAGTaGTGTGTAGCTTTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: MQIHFNRNGNGRNLKTREVYGVK*CVALLY
Trigger: ATAAAGCAAAGCTACACATCACTTGACACCATACAC...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381714.7
CDS-3UTR GCA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGCATGCCTCTGTTCATTaGCTTCTGCTGCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWHASVH*LLLHLK
Trigger: CTTCAAATGCAGCAGAAGGCAATGAACAGAGGCATG...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTGTTTTCTGATACTGTTCCAGTTCCTTCATGTAACGCTCCTTATCTCTGTCTGCATGCCTCTGTTCATTaGCTTCTGCTGCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: LFSDTVPVPSCNAPYLCLHASVH*LLLHLK
Trigger: CTTCAAATGCAGCAGAAGGCAATGAACAGAGGCATG...CAGACAGAGATAAGGAGCGTTACATGAAGGAACTGGAACAGTATCAGAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR GCA 90 bp TCAGGAGGCAGTTTACTCCATTCATTGCCTAACATCCTTGTGATTTCTGGAAATGACTTCTGGTCTCTTTaGTCGAAGTTGTTCTCGACG +
Preference number: 4 (lower is better)
Translates to: SGGSLLHSLPNILVISGNDFWSL*SKLFST
Trigger: CGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTC...ATTTCCAGAAATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR GCA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGCTTGCCTATGAGATTTaGCTTTCTGACGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQLAYEI*LSDGPG
Trigger: CCCAGGACCGTCAGAAAGGCAAATCTCATAGGCAAG...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGCTGCTTCCCGAGCTTTaGTATGGTTCAAGAATTCCT +
Preference number: 4 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKLLPEL*YGSRIP
Trigger: AGGAATTCTTGAACCATAGCAAAGCTCGGGAAGCAG...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ACTACATTTAACAACCATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCAACTCCATGTTGGATTTaGGAAGCTGGCGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TTFNNHATGILTKSPTCSTPCWI*EAGGAL
Trigger: CAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGT...TGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATGGTTGTTAAATGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTCGCATGCTCTCCACGTaGTTTTGCAGGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCRMLST*FCRAAF
Trigger: GAATGCAGCCCTGCAAAAGCACGTGGAGAGCATGCG...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTCGCAGGGTCTCCAGGTaGTGCTGTAAGACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCRRVSR*CCKTVL
Trigger: CAACACAGTCTTACAGCAGCACCTGGAGACCCTGCG...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACTCTGCACTCTTTCTCTaGCCCCACTCAGTTCAAATT +
Preference number: 4 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDSALFL*PHSVQI
Trigger: AATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGA...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTCCAGACAACGGGCTCTaGTTGCTCTGCCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCPDNGL*LLCLWF
Trigger: GAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGG...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGGGTAGTTCTGCCCTATaGCCTGACTTATGGGCATAC +
Preference number: 4 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQGSSAL*PDLWAY
Trigger: GTATGCCCATAAGTCAGGGCATAGGGCAGAACTACC...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CCTTCATGTAACGCTCCTTATCTCTGTCTGCTTCATCAAGGTAGCGCTGTTTTTGATCATTACTCTCCTTaGAACCGTCTTCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: PSCNAPYLCLLHQGSAVFDHYSP*NRLHLQ
Trigger: TTGCAGATGAAGACGGTTCCAAGGAGAGTAATGATC...AAAAACAGCGCTACCTTGATGAAGCAGACAGAGATAAGGAGCGTTACATGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CCA 90 bp TGTTTTTCCTCAGGAGGCAGTTTACTCCATTCATTGCCTAACATCCTTGTGATTATTCTGGATTGTTGGTaGATGATGTGGCGCCACTAC +
Preference number: 4 (lower is better)
Translates to: CFSSGGSLLHSLPNILVIILDCW*MMWRHY
Trigger: GTAGTGGCGCCACATCATCCACCAACAATCCAGAAT...AATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CCA 90 bp CAACCAGTTAGTCCAGAGGTCAGAAAATGGAGATGTATAAATTGGTGGGGGCCAACTTATGGAACATCTTaGAGTTCTAAGACCATTCCC +
Preference number: 4 (lower is better)
Translates to: QPVSPEVRKWRCINWWGPTYGTS*SSKTIP
Trigger: GGGAATGGTCTTAGAACTCCAAGATGTTCCATAAGT...TGGCCCCCACCAATTTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTACAGAAGAGCCTTGCTaGGGCTGGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCTEEPC*GWDSMS
Trigger: AGACATGGAGTCCCAGCCCCAGCAAGGCTCTTCTGT...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAAGCCTCCCAAGTAGCTaGGACTACAGTGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: HATGILTKSPTCSSNVIPSLPSS*DYSDSL
Trigger: AAGAGAATCACTGTAGTCCCAGCTACTTGGGAGGCT...TGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR TCA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGTCCTCTGTTTACAAGTaGCCTTTTCCTCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: HELGIVLACNFIYCLLTESSVYK*PFPQQK
Trigger: TTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGA...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGGGGATTTGGGTGCATTaGTGTCTCGAAGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQGIWVH*CLEEVS
Trigger: AGAAACCTCTTCGAGACAGCAATGCACCCAAATCCC...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGGTGCTTTTGCAGGGCTaGATTCCTCTCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LEISCIPEYANVSSHCQVVLLQG*IPLLKL
Trigger: GAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCAC...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp TTTAACAACCATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTGCTTTTGCAGGGCTaGATTCCTCTCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: FNNHATGILTKSPTCSSNVLLQG*IPLLKL
Trigger: GAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCAC...ATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATGGTTGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGAGCTCATATACATGTTaGTGCTCCCTCATTTGGCTT +
Preference number: 4 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWSSYTC*CSLIWL
Trigger: AAGCCAAATGAGGGAGCAGCAACATGTATATGAGCT...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACGATCATTACTCTCCTTaGAACCGTCTTCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDDHYSP*NRLHLQ
Trigger: TTGCAGATGAAGACGGTTCCAAGGAGAGTAATGATC...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGCAAATTCTGGATTGTTaGTGGATGATGTGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQQILDC*WMMWRH
Trigger: GTGGCGCCACATCATCCACCAACAATCCAGAATTTG...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp AATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAGGGTTTTAGTACCTCAAACTCCATGTTaGATTTGCGAAGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: NLNQVSNLFIQCNPRVLVPQTPC*ICEAGG
Trigger: TCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGG...TACTAAAACCCTGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR TCA 90 bp CATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCACAGTCTGTTCATATATaGGTCAATGGTGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: HATGILTKSPTCSSNVIPQSVHI*VNGVHC
Trigger: ACAGTGGACACCATTGACTCATATATGAACAGACTG...TGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR GCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTGGGCTCTGCTTGCTCTaGCTTTGGTTCCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCGLCLL*LWFQRS
Trigger: AGATCTTTGGAACCAAAGGCAGAGCAAGCAGAGCCC...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGATTATTTTGCCCCAATaGGGCGAAGGACTACGTGGT +
Preference number: 4 (lower is better)
Translates to: LEISCIPEYANVSSHCQVIILPQ*GEGLRG
Trigger: ACCACGTAGTCCTTCGCCGCATTGGGGCAAAATAAT...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381714.7
CDS-3UTR CCA 90 bp TTTTCCTCAGGAGGCAGTTTACTCCATTCATTGCCTAACATCCTTGTGATTTCTCATCCTTGTGATTTCTaGAAATGGGACTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: FSSGGSLLHSLPNILVISHPCDF*KWDFWS
Trigger: AGACCAGAAGTCCCATTTCCAGAAATCACAAGGATG...AGAAATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTCTATGCCCTGACTTATaGGCATACTATGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCLCPDL*AYYERG
Trigger: GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGCCAAGTGATGGTATGTaGGTTTCAGCGCATGGATAT +
Preference number: 4 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQPSDGM*VSAHGY
Trigger: ATATCCATGCGCTGAAACCCACATACCATCACTTGG...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGTTTCCTCAGCAAAAATaGTCCACAAGACATTGTCAA +
Preference number: 4 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKFPQQK*STRHCQ
Trigger: TTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAA...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTATGATGGGAGAAGACTaGGCCTGTCCAATGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCMMGED*ACPMQE
Trigger: TTCTTGCATTGGACAGGCCCAGTCTTCTCCCATCAT...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGATACTGACAGTTTTGTaGCATCTGAATCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LEISCIPEYANVSSHCQVILTVL*HLNPSH
Trigger: GTGGCTGGGATTCAGATGCCACAAAACTGTCAGTAT...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR TCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTGGTCACCTAGTAAGCTaGAGATATGCAGATCCACTT +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCGHLVS*RYADPL
Trigger: AAGTGGATCTGCATATCTTCAGCTTACTAGGTGACC...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTGTAACTTCATTTACTaGCTCCTCACTGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LEISCIPEYANVSSHCQVCNFIY*LLTEHR
Trigger: TCTGTGCTCAGTGAGGAGGCAGTAAATGAAGTTACA...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTCATCCTTGTGATTTCTaGAAATGGGACTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCHPCDF*KWDFWS
Trigger: AGACCAGAAGTCCCATTTCCAGAAATCACAAGGATG...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CCA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTCAAATTTCCATGGATaGCTTCTCATTCCTCACAAG +
Preference number: 4 (lower is better)
Translates to: LEISCIPEYANVSSHCQVSNFHG*LLIPHK
Trigger: CTTGTGAGGAATGAGAAGCCATCCATGGAAATTTGA...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR GCA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTTTTAGCCTTGTGCTCTaGAGTGTCAAAACAAAAACA +
Preference number: 4 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCFSLVL*SVKTKT
Trigger: TGTTTTTGTTTTGACACTGCAGAGCACAAGGCTAAA...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS GCA 90 bp CTGGCAAAGCTGCTGGTCAGCACCTGCCGCAGGGTCTCCAGGTGCTaGTGTAAGACTGTGTTGCGGCTCCGCTCCTGGATCACATCCACC +
Preference number: 5 (lower is better)
Translates to: LAKLLVSTCRRVSRC*CKTVLRLRSWITST
Trigger: GGTGGATGTGATCCAGGAGCGGAGCCGCAACACAGTCTTACAGCAGCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS GCA 90 bp CCACTTCCAGGCAAGGGCATGCTGGCAAAGCTGCTGGTCAGCACCTaGCGCAGGGTCTCCAGGTGCTGCTGTAAGACTGTGTTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: PLPGKGMLAKLLVST*RRVSRCCCKTVLRL
Trigger: GAGCCGCAACACAGTCTTACAGCAGCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCATGCCCTTGCCTGGAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS GCA 90 bp ATGCTGGCAAAGCTGCTGGTCAGCACCTGCCGCAGGGTCTCCAGGTaGTGCTGTAAGACTGTGTTGCGGCTCCGCTCCTGGATCACATCC +
Preference number: 5 (lower is better)
Translates to: MLAKLLVSTCRRVSR*CCKTVLRLRSWITS
Trigger: GGATGTGATCCAGGAGCGGAGCCGCAACACAGTCTTACAGCAGCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS CCA 90 bp AGGGTCTCCAGGTGCTGCTGTAAGACTGTGTTGCGGCTCCGCTCCTaGATCACATCCACCTCCAGCTTCTCCACTGCTGTGCGCATGCTC +
Preference number: 5 (lower is better)
Translates to: RVSRCCCKTVLRLRS*ITSTSSFSTAVRML
Trigger: GAGCATGCGCACAGCAGTGGAGAAGCTGGAGGTGGATGTGATCCAGGAGCGGAGCCGCAACACAGTCTTACAGCAGCACCTGGAGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS-3UTR CAA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGTTGCTGCTCCCTCATTaGGCTTCCTGGGGTGATGGC +
Preference number: 5 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKLLLPH*ASWGDG
Trigger: GCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAA...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGGTAGGAAACACAGCCTaGCTCCACAGGGCACTGTCA +
Preference number: 5 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKVGNTA*LHRALS
Trigger: TGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTAC...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS CCA 90 bp CCACGTGCTTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTTaGATTTGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTGAGGACA +
Preference number: 5 (lower is better)
Translates to: PRAFAGLHSSPQTPC*ICEAGGALLPELRT
Trigger: TGTCCTCAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS-3UTR CAA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGGACAACGGGCTCTGCTaGCTCTGCCTTTGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLDNGLC*LCLWFQ
Trigger: TTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTC...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS GCA 90 bp CTTCTCCACTGCTGTGCGCATGCTCTCCACGTGCTTTTGCAGGGCTaGATTCCTCTCCTCAAACTCCATGTTGGATTTGCGAAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: LLHCCAHALHVLLQG*IPLLKLHVGFAKLA
Trigger: CGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS-3UTR CAA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGGCTCTCCACGTGCTTTaGCAGGGCTGCATTCCTCTC +
Preference number: 5 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLALHVL*QGCIPL
Trigger: GAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAGC...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGTGCTGTAAGACTGTGTaGCGGCTCCGCTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLCCKTV*RLRSWI
Trigger: GATCCAGGAGCGGAGCCGCAACACAGTCTTACAGCA...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS TCA 90 bp CTCCATGTTGGATTTGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTaGGGACATACATCCCACAGAACACATGCAGCACTAGAAGGAGTC +
Preference number: 5 (lower is better)
Translates to: LHVGFAKLAELCFPS*GHTSHRTHAALEGV
Trigger: GACTCCTTCTAGTGCTGCATGTGTTCTGTGGGATGTATGTCCTCAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS GCA 90 bp ACCTCCAGCTTCTCCACTGCTGTGCGCATGCTCTCCACGTGCTTTTaGAGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTTGCGA +
Preference number: 5 (lower is better)
Translates to: TSSFSTAVRMLSTCF*RAAFLSSNSMLDLR
Trigger: TCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGCTGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS GCA 90 bp ACATCCACCTCCAGCTTCTCCACTGCTGTGCGCATGCTCTCCACGTaGTTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGAT +
Preference number: 5 (lower is better)
Translates to: TSTSSFSTAVRMLST*FCRAAFLSSNSMLD
Trigger: ATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGCTGGAGGTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS GCA 90 bp GCTTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTTaGGAAGCTGGCGGAGCTCTGCTTCCCGAGCTGAGGACATACATC +
Preference number: 5 (lower is better)
Translates to: AFAGLHSSPQTPCWI*EAGGALLPELRTYI
Trigger: GATGTATGTCCTCAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS CCA 90 bp CCACGTGCTTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTTaGATTTGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTTTGCTAT +
Preference number: 5 (lower is better)
Translates to: PRAFAGLHSSPQTPC*ICEAGGALLPELCY
Trigger: ATAGCAAAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS CCA 90 bp AGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTTGCGAAGCTaGCGGAGCTCTGCTTCCCGAGCTGAGGACATACATCCCACAGAA +
Preference number: 5 (lower is better)
Translates to: RAAFLSSNSMLDLRS*RSSASRAEDIHPTE
Trigger: TTCTGTGGGATGTATGTCCTCAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS-3UTR CAA 90 bp AGCACCGTGTGGGGTAGGAAACACAGCCTTGCTCCACAGGGCACTGTCAGCAAGTGCCTTCTGCTGCATTaGAAGACTCACTCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: STVWGRKHSLAPQGTVSKCLLLH*KTHSEA
Trigger: TGCTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCA...CTTGCTGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTACCCCACACGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCTGCTTGCTCTGCCTTaGGTTCCAAAGATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLLLALP*VPKISA
Trigger: AGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCAG...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS GCA 90 bp GCTTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTTaGGAAGCTGGCGGAGCTCTGCTTCCCGAGCTTTGCTATGGTTCA +
Preference number: 5 (lower is better)
Translates to: AFAGLHSSPQTPCWI*EAGGALLPELCYGS
Trigger: TGAACCATAGCAAAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS CCA 90 bp AGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTTGCGAAGCTaGCGGAGCTCTGCTTCCCGAGCTTTGCTATGGTTCAAGAATTCC +
Preference number: 5 (lower is better)
Translates to: RAAFLSSNSMLDLRS*RSSASRALLWFKNS
Trigger: GGAATTCTTGAACCATAGCAAAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCAGGGGATTTGGGTGCATaGCTGTCTCGAAGAGGTTTC +
Preference number: 5 (lower is better)
Translates to: GWCSNMTGSSALCPDLWAGDLGA*LSRRGF
Trigger: GAAACCTCTTCGAGACAGCAATGCACCCAAATCCCC...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp GCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGTCTCTTTGCTCGAAGTaGTTCTCGACGCTCATTCAT +
Preference number: 5 (lower is better)
Translates to: ALTYGHTMRGAALLSTCLSLCSK*FSTLIH
Trigger: ATGAATGAGCGTCGAGAACAACTTCGAGCAAAGAGA...CAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGGGACTTCTGGTCTCTTaGCTCGAAGTTGTTCTCGAC +
Preference number: 5 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLGLLVS*LEVVLD
Trigger: GTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCC...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGGCTCTCCACGTGCTTTaGCAGGGCTGCATTCCTCTC +
Preference number: 5 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWALHVL*QGCIPL
Trigger: GAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAGC...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCGTAGGAAACACAGCCTaGCTCCACAGGGCACTGTCA +
Preference number: 5 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCVGNTA*LHRALS
Trigger: TGACAGTGCCCTGTGGAGCAAGGCTGTGTTTCCTAC...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCTGCTTGCTCTGCCTTaGGTTCCAAAGATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LCPDLWAYYERGRTSIHLLLALP*VPKISA
Trigger: AGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCAG...CAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCGGGGATTTGGGTGCATaGCTGTCTCGAAGAGGTTTC +
Preference number: 5 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCGDLGA*LSRRGF
Trigger: GAAACCTCTTCGAGACAGCAATGCACCCAAATCCCC...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGGACAACGGGCTCTGCTaGCTCTGCCTTTGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWDNGLC*LCLWFQ
Trigger: TTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTC...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCAACAGTGAGTTCTAGCTaGGGCTTTGCAGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: GWCSNMTGSSALCPDLWATVSSS*GFADKE
Trigger: CTCCTTGTCTGCAAAGCCCAAGCTAGAACTCACTGT...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS TCA 90 bp AGGACATACATCCCACAGAACACATGCAGCACTAGAAGGAGTCTCTaGGGAGTCCCAATGACTCTTACAGGGAAGTTCTGCTTAGCTGCC +
Preference number: 5 (lower is better)
Translates to: RTYIPQNTCSTRRSL*GVPMTLTGKFCLAA
Trigger: GGCAGCTAAGCAGAACTTCCCTGTAAGAGTCATTGGGACTCCTCAGAGACTCCTTCTAGTGCTGCATGTGTTCTGTGGGATGTATGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS-3UTR CAA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCACAAATTCTGGATTGTaGGTGGATGATGTGGCGCCA +
Preference number: 5 (lower is better)
Translates to: MTGSSALCPDLWAYYERGTNSGL*VDDVAP
Trigger: TGGCGCCACATCATCCACCAACAATCCAGAATTTGT...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCTGCCTTCTGCTGCATTaGAAGACTCACTCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: MTGSSALCPDLWAYYERGCLLLH*KTHSEA
Trigger: TGCTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCA...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCTCCTCGTTTACTTCGTaGCTCATCTTCATGCCTCTG +
Preference number: 5 (lower is better)
Translates to: MTGSSALCPDLWAYYERGSSFTS*LIFMPL
Trigger: CAGAGGCATGAAGATGAGCAACGAAGTAAACGAGGA...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGTCTGCTTCCCGAGCTTaGCTATGGTTCAAGAATTCC +
Preference number: 5 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLSASRA*LWFKNS
Trigger: GGAATTCTTGAACCATAGCAAAGCTCGGGAAGCAGA...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGGTTCTAGCTTGGGCTTaGCAGACAAGGAGTCTAAGA +
Preference number: 5 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLVLAWA*QTRSLR
Trigger: TCTTAGACTCCTTGTCTGCAAAGCCCAAGCTAGAAC...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS CCA 90 bp CTTGAGAGAGATCCTCCACAAATTCTGGATTGTTGGTGGATGATGTaGCGCCACTACTGTATGGAACCTCTGGGTGATTTAACCCAGTGG +
Preference number: 5 (lower is better)
Translates to: LERDPPQILDCWWMM*RHYCMEPLGDLTQW
Trigger: CCACTGGGTTAAATCACCCAGAGGTTCCATACAGTAGTGGCGCCACATCATCCACCAACAATCCAGAATTTGTGGAGGATCTCTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558651.5
ENST00000559035.5
ENST00000559099.5
ENST00000560498.5
ENST00000560867.1
ENST00000560986.1
CDS CCA 90 bp GAAGCAACTGACCTTGAGAGAGATCCTCCACAAATTCTGGATTGTTaGTGGATGATGTGGCGCCACTACTGTATGGAACCTCTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: EATDLERDPPQILDC*WMMWRHYCMEPLGD
Trigger: ATCACCCAGAGGTTCCATACAGTAGTGGCGCCACATCATCCACCAACAATCCAGAATTTGTGGAGGATCTCTCTCAAGGTCAGTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558176.1
ENST00000558651.5
ENST00000559035.5
ENST00000559099.5
ENST00000560498.5
ENST00000560867.1
ENST00000560986.1
CDS-3UTR CAA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCTCTCTTTGCTCGAAGTaGTTCTCGACGCTCATTCAT +
Preference number: 5 (lower is better)
Translates to: MTGSSALCPDLWAYYERGSLCSK*FSTLIH
Trigger: ATGAATGAGCGTCGAGAACAACTTCGAGCAAAGAGA...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACTGCTGTAAGACTGTGTaGCGGCTCCGCTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDCCKTV*RLRSWI
Trigger: GATCCAGGAGCGGAGCCGCAACACAGTCTTACAGCA...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACTTGCTGCTCCCTCATTaGGCTTCCTGGGGTGATGGC +
Preference number: 5 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDLLLPH*ASWGDG
Trigger: GCCATCACCCCAGGAAGCCAAATGAGGGAGCAGCAA...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGAAGCTCATATACATGTaGCTGCTCCCTCATTTGGCT +
Preference number: 5 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLKLIYM*LLPHLA
Trigger: AGCCAAATGAGGGAGCAGCAACATGTATATGAGCTT...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGATGCTCCACAAGACATaGTCAACAGATGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLMLHKT*STDGNR
Trigger: TCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGACAGTGAGTTCTAGCTaGGGCTTTGCAGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWTVSSS*GFADKE
Trigger: CTCCTTGTCTGCAAAGCCCAAGCTAGAACTCACTGT...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS CCA 90 bp GCAACTGACCTTGAGAGAGATCCTCCACAAATTCTGGATTGTTGGTaGATGATGTGGCGCCACTACTGTATGGAACCTCTGGGTGATTTA +
Preference number: 5 (lower is better)
Translates to: ATDLERDPPQILDCW*MMWRHYCMEPLGDL
Trigger: TAAATCACCCAGAGGTTCCATACAGTAGTGGCGCCACATCATCCACCAACAATCCAGAATTTGTGGAGGATCTCTCTCAAGGTCAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558176.1
ENST00000558651.5
ENST00000559035.5
ENST00000559099.5
ENST00000560498.5
ENST00000560867.1
ENST00000560986.1
CDS-3UTR CAA 90 bp GCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAGCCTTGTGCTCTGCTCATGCCTCTGTTCATaGCCTTCTGCTGCATTTGAA +
Preference number: 5 (lower is better)
Translates to: ALPLVPKISAVTFSLVLCSCLCS*PSAAFE
Trigger: TTCAAATGCAGCAGAAGGCAATGAACAGAGGCATGA...GCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGGGACTTCTGGTCTCTTaGCTCGAAGTTGTTCTCGAC +
Preference number: 5 (lower is better)
Translates to: MQIHFNRNGNGRNLKTREGLLVS*LEVVLD
Trigger: GTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCC...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGCTCTCCTTCAGAACCTaGCTGAGCAACCAGTTAGTC +
Preference number: 5 (lower is better)
Translates to: MQIHFNRNGNGRNLKTRELSFRT*LSNQLV
Trigger: GACTAACTGGTTGCTCAGCAAGGTTCTGAAGGAGAG...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGAGATCATTACTCTCCTaGGAACCGTCTTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLRSLLS*EPSSSA
Trigger: TGCAGATGAAGACGGTTCCAAGGAGAGTAATGATCT...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CAACCAGTTAGTCCAGAGGTCAGAAAATGGAGATGTATAAATTGGTGGGGGCCAACAAATTCTGGATTGTaGGTGGATGATGTGGCGCCA +
Preference number: 5 (lower is better)
Translates to: QPVSPEVRKWRCINWWGPTNSGL*VDDVAP
Trigger: TGGCGCCACATCATCCACCAACAATCCAGAATTTGT...TGGCCCCCACCAATTTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CCTTGTGATTTCTGGAAATGGGACTTCTGGTCTCTTTGCTCGAAGTTGTTCTCGCTGAAGCAACTGACCTaGAGAGAGATCCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: PCDFWKWDFWSLCSKLFSLKQLT*REILHK
Trigger: TTTGTGGAGGATCTCTCTCAAGGTCAGTTGCTTCAG...CGAGAACAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGAAATCACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CAA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGTCATGCCTCTGTTCATaGCCTTCTGCTGCATTTGAA +
Preference number: 5 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLSCLCS*PSAAFE
Trigger: TTCAAATGCAGCAGAAGGCAATGAACAGAGGCATGA...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGCAGATCCACTTTAACAGAAATGGAAATGGTAGGAACCTGAAGACCCGGGAGTCCTCGTTTACTTCGTaGCTCATCTTCATGCCTCTG +
Preference number: 5 (lower is better)
Translates to: MQIHFNRNGNGRNLKTRESSFTS*LIFMPL
Trigger: CAGAGGCATGAAGATGAGCAACGAAGTAAACGAGGA...CTCCCGGGTCTTCAGGTTCCTACCATTTCCATTTCTGTTAAAGTGGATCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGCTGCCGGGCTGCATCTaGCCTATGAGATTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWLPGCI*PMRFAF
Trigger: AAAGGCAAATCTCATAGGCAAGATGCAGCCCGGCAG...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAACTCCATGTTGGATTaGCGAAGCTGGCGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKNSMLD*RSWRSS
Trigger: AGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTT...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACTCCTCAAACTCCATGTaGGATTTGCGAAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDSSNSM*DLRSWR
Trigger: CCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGA...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGTCCTCAAACTCCATGTaGGATTTGCGAAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWSSNSM*DLRSWR
Trigger: CCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGA...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CAACCAGTTAGTCCAGAGGTCAGAAAATGGAGATGTATAAATTGGTGGGGGCCAATGGAGATGTATAAATaGGTGGGGGCCAAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: QPVSPEVRKWRCINWWGPMEMYK*VGAKES
Trigger: GCTTTCCTTGGCCCCCACCAATTTATACATCTCCAT...TGGCCCCCACCAATTTATACATCTCCATTTTCTGACCTCTGGACTAACTGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp AAGCAAAGGGATCTGCACTCTTTCTCTGCCCCCACTCAGTTCAAATTTCCATGGATGCTCCACAAGACATaGTCAACAGATGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: KQRDLHSFSAPTQFKFPWMLHKT*STDGNR
Trigger: TCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT...CCATGGAAATTTGAACTGAGTGGGGGCAGAGAAAGAGTGCAGATCCCTTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAGCCTTGCTGGGGCTGAATAAACTTAGGGCTTaGTACTCTTTCCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: MLHKTLSTDGNRRALLGLNKLRA*YSFPFS
Trigger: GGAGAAAGGGAAAGAGTACAAAGCCCTAAGTTTATT...CAGCCCCAGCAAGGCTCTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCAACCTCTCTTTCCTTTaGCTGTTAAAGGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: MTGSSALCPDLWAYYERGNLSFL*LLKEPE
Trigger: TTCTGGTTCCTTTAACAGCAAAAGGAAAGAGAGGTT...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS GCA 90 bp AACCTCCTCGTTTACTTCGTTGCTCATCTTCATGCCTCTGTTCATTaGCTTCTGCTGCATTTGAAGACTCACTCTGAAGCAACTGACCTT +
Preference number: 5 (lower is better)
Translates to: NLLVYFVAHLHASVH*LLLHLKTHSEATDL
Trigger: AAGGTCAGTTGCTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCAATGAACAGAGGCATGAAGATGAGCAACGAAGTAAACGAGGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558651.5
ENST00000559099.5
ENST00000560498.5
ENST00000560867.1
CDS CCA 90 bp CTTGAGAGAGATCCTCCACAAATTCTGGATTGTTGGTGGATGATGTaGCGCCACTACTGTATGGAACCTCTGGGTGATTTAACTTTGCTA +
Preference number: 5 (lower is better)
Translates to: LERDPPQILDCWWMM*RHYCMEPLGDLTLL
Trigger: TAGCAAAGTTAAATCACCCAGAGGTTCCATACAGTAGTGGCGCCACATCATCCACCAACAATCCAGAATTTGTGGAGGATCTCTCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558176.1
CDS-3UTR CAA 90 bp ATTTCTGGAAATGGGACTTCTGGTCTCTTTGCTCGAAGTTGTTCTCGACGCTCAAGATCATTACTCTCCTaGGAACCGTCTTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: ISGNGTSGLFARSCSRRSRSLLS*EPSSSA
Trigger: TGCAGATGAAGACGGTTCCAAGGAGAGTAATGATCT...TGAGCGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CAA 90 bp CATGAGTTAGGTATTGTGCTAGCCTGTAACTTCATTTACTGCCTCCTCACTGAGCTGAAGCAACTGACCTaGAGAGAGATCCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: HELGIVLACNFIYCLLTELKQLT*REILHK
Trigger: TTTGTGGAGGATCTCTCTCAAGGTCAGTTGCTTCAG...CTCAGTGAGGAGGCAGTAAATGAAGTTACAGGCTAGCACAATACCTAACTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp AGCGCTGTTTTTCCTCAGGAGGCAGTTTACTCCATTCATTGCCTAACATCCTTGTCATGCCTCTGTTCATaGCCTTCTGCTGCATTTGAA +
Preference number: 5 (lower is better)
Translates to: SAVFPQEAVYSIHCLTSLSCLCS*PSAAFE
Trigger: TTCAAATGCAGCAGAAGGCAATGAACAGAGGCATGA...CAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAAACAGCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CAA 90 bp ATTTCTGGAAATGGGACTTCTGGTCTCTTTGCTCGAAGTTGTTCTCGACGCTCATCTCTTTGCTCGAAGTaGTTCTCGACGCTCATTCAT +
Preference number: 5 (lower is better)
Translates to: ISGNGTSGLFARSCSRRSSLCSK*FSTLIH
Trigger: ATGAATGAGCGTCGAGAACAACTTCGAGCAAAGAGA...TGAGCGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CAA 90 bp GGATGGTGTAGCAACATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCAAGTTTACTCCATTCATaGCCTAACATCCTTGTGATT +
Preference number: 5 (lower is better)
Translates to: GWCSNMTGSSALCPDLWASLLHS*PNILVI
Trigger: AATCACAAGGATGTTAGGCAATGAATGGAGTAAACT...TGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCAGTTTACTCCATTCATaGCCTAACATCCTTGTGATT +
Preference number: 5 (lower is better)
Translates to: MTGSSALCPDLWAYYERGSLLHS*PNILVI
Trigger: AATCACAAGGATGTTAGGCAATGAATGGAGTAAACT...GCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCATCCTCAAACTCCATGTaGGATTTGCGAAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: HATGILTKSPTCSSNVIPSSNSM*DLRSWR
Trigger: CCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGA...TGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR CAA 90 bp ACTACATTTAACAACCATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCAGCTCTCCACGTGCTTTaGCAGGGCTGCATTCCTCTC +
Preference number: 5 (lower is better)
Translates to: TTFNNHATGILTKSPTCSALHVL*QGCIPL
Trigger: GAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAGC...TGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATGGTTGTTAAATGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR CAA 90 bp AATCTTAACCAAGTCTCCAACTTGTTCATCCAATGTAATCCCAGGGTTTTAGTATGCTGTAAGACTGTGTaGCGGCTCCGCTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: NLNQVSNLFIQCNPRVLVCCKTV*RLRSWI
Trigger: GATCCAGGAGCGGAGCCGCAACACAGTCTTACAGCA...TACTAAAACCCTGGGATTACATTGGATGAACAAGTTGGAGACTTGGTTAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR CAA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGCTCTCCTTCAGAACCTaGCTGAGCAACCAGTTAGTC +
Preference number: 5 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKLSFRT*LSNQLV
Trigger: GACTAACTGGTTGCTCAGCAAGGTTCTGAAGGAGAG...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CATAAGGACAATTCCATAGGAAGCTCATATACATGTTGCTGCTCCCTCATTTGGCTGAAGCAACTGACCTaGAGAGAGATCCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: HKDNSIGSSYTCCCSLIWLKQLT*REILHK
Trigger: TTTGTGGAGGATCTCTCTCAAGGTCAGTTGCTTCAG...CCAAATGAGGGAGCAGCAACATGTATATGAGCTTCCTATGGAATTGTCCTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp GGCAGTTTACTCCATTCATTGCCTAACATCCTTGTGATTTCTGGAAATGGGACTTGCCTTCTGCTGCATTaGAAGACTCACTCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: GSLLHSLPNILVISGNGTCLLLH*KTHSEA
Trigger: TGCTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCA...AGTCCCATTTCCAGAAATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CAA 90 bp TGTTTTTCCTCAGGAGGCAGTTTACTCCATTCATTGCCTAACATCCTTGTGATTGGACTTCTGGTCTCTTaGCTCGAAGTTGTTCTCGAC +
Preference number: 5 (lower is better)
Translates to: CFSSGGSLLHSLPNILVIGLLVS*LEVVLD
Trigger: GTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCC...AATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CAA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGTCTGCTTCCCGAGCTTaGCTATGGTTCAAGAATTCC +
Preference number: 5 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKSASRA*LWFKNS
Trigger: GGAATTCTTGAACCATAGCAAAGCTCGGGAAGCAGA...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACATGGAGATGTATAAATaGGTGGGGGCCAAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDMEMYK*VGAKES
Trigger: GCTTTCCTTGGCCCCCACCAATTTATACATCTCCAT...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGCTGCCGGGCTGCATCTaGCCTATGAGATTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: LEISCIPEYANVSSHCQVLPGCI*PMRFAF
Trigger: AAAGGCAAATCTCATAGGCAAGATGCAGCCCGGCAG...CACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ACTACATTTAACAACCATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCAAACTCCATGTTGGATTaGCGAAGCTGGCGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TTFNNHATGILTKSPTCSNSMLD*RSWRSS
Trigger: AGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTT...TGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATGGTTGTTAAATGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS-3UTR CAA 90 bp TCCTGGACCATGTTATGGCCTTTTCTGGTCACAAAAGCAGTGCTAGCAATGCTGGCTATGAAGTTTTCATaGTCTTGGGGATTAGCTAAA +
Preference number: 5 (lower is better)
Translates to: SWTMLWPFLVTKAVLAMLAMKFS*SWGLAK
Trigger: TTTAGCTAATCCCCAAGACAATGAAAACTTCATAGC...CAGCATTGCTAGCACTGCTTTTGTGACCAGAAAAGGCCATAACATGGTCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTAACTCCATGTTGGATTaGCGAAGCTGGCGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCNSMLD*RSWRSS
Trigger: AGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTT...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGCCGCAGCACTTTATTTaGGTGTCCTTTCCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKPQHFI*VSFPFL
Trigger: AAGAAAAGGAAAGGACACCAAAATAAAGTGCTGCGG...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381714.7
CDS-3UTR CAA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGAAGCTCATATACATGTaGCTGCTCCCTCATTTGGCT +
Preference number: 5 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQKLIYM*LLPHLA
Trigger: AGCCAAATGAGGGAGCAGCAACATGTATATGAGCTT...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp CTTTTCCTCAGCAAAAATGCTCCACAAGACATTGTCAACAGATGGGAACAGAAGAACCTCTCTTTCCTTTaGCTGTTAAAGGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: LFLSKNAPQDIVNRWEQKNLSFL*LLKEPE
Trigger: TTCTGGTTCCTTTAACAGCAAAAGGAAAGAGAGGTT...CTTCTGTTCCCATCTGTTGACAATGTCTTGTGGAGCATTTTTGCTGAGGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp GGCAGTTTACTCCATTCATTGCCTAACATCCTTGTGATTTCTGGAAATGGGACTAGTTTACTCCATTCATaGCCTAACATCCTTGTGATT +
Preference number: 5 (lower is better)
Translates to: GSLLHSLPNILVISGNGTSLLHS*PNILVI
Trigger: AATCACAAGGATGTTAGGCAATGAATGGAGTAAACT...AGTCCCATTTCCAGAAATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559035.5
CDS-3UTR CAA 90 bp CTTTCTCCTCTGTTTACAAGTGACCTTTTCCTCAGCAAAAATGCTCCACAAGACGCTATGAAGTTTTCATaGTCTTGGGGATTAGCTAAA +
Preference number: 5 (lower is better)
Translates to: LSPLFTSDLFLSKNAPQDAMKFS*SWGLAK
Trigger: TTTAGCTAATCCCCAAGACAATGAAAACTTCATAGC...GTCTTGTGGAGCATTTTTGCTGAGGAAAAGGTCACTTGTAAACAGAGGAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp TTGAAATCTCATGCATTCCTGAATATGCAAATGTTTCAAGTCACTGTCAAGTGTAGATCATTACTCTCCTaGGAACCGTCTTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: LKSHAFLNMQMFQVTVKCRSLLS*EPSSSA
Trigger: TGCAGATGAAGACGGTTCCAAGGAGAGTAATGATCT...ACACTTGACAGTGACTTGAAACATTTGCATATTCAGGAATGCATGAGATTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp ATAAAAGGGTCTAAGCGAAATTACAATGAAAAGTCTTCCTTTCTGCAGCAGCAGAATAAACTTAGGGCTTaGTACTCTTTCCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: IKGSKRNYNEKSSFLQQQNKLRA*YSFPFS
Trigger: GGAGAAAGGGAAAGAGTACAAAGCCCTAAGTTTATT...CTGCTGCTGCAGAAAGGAAGACTTTTCATTGTAATTTCGCTTAGACCCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS-3UTR CAA 90 bp TTTAACAACCATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATAACCAAGTCTCCAACTaGTTCATCCAATGTAATCCC +
Preference number: 5 (lower is better)
Translates to: FNNHATGILTKSPTCSSNNQVSN*FIQCNP
Trigger: GGGATTACATTGGATGAACAAGTTGGAGACTTGGTT...ATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATGGTTGTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS TCA 90 bp TCCATCTCTCTTCATTATGTAACCAAGATGGTGTATGGTGTCAAGTaGTGTGTAGCTTTGCTTTATAGAATTTTACAGTCCGTTATCTTC +
Preference number: 5 (lower is better)
Translates to: SISLHYVTKMVYGVK*CVALLYRILQSVIF
Trigger: GAAGATAACGGACTGTAAAATTCTATAAAGCAAAGCTACACATCACTTGACACCATACACCATCTTGGTTACATAATGAAGAGAGATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381714.7
CDS-3UTR CAA 90 bp TTTAACAACCATGCAACAGGAATCTTAACCAAGTCTCCAACTTGTTCATCCAATGCTATGAAGTTTTCATaGTCTTGGGGATTAGCTAAA +
Preference number: 5 (lower is better)
Translates to: FNNHATGILTKSPTCSSNAMKFS*SWGLAK
Trigger: TTTAGCTAATCCCCAAGACAATGAAAACTTCATAGC...ATTGGATGAACAAGTTGGAGACTTGGTTAAGATTCCTGTTGCATGGTTGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558845.1
CDS CCA 72 bp CTCCACTTCCAGGCAAGGGCATGCTGGCAAAGCTGCTaGTCAGCACCTGCCGCAGGGTCTCCAGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LHFQARACWQSC*SAPAAGSPGAA
Trigger: AGCAGCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCATGCCCTTGCCTGGAAGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS GCA 72 bp GCCGCAGGGTCTCCAGGTGCTGCTGTAAGACTGTGTTaGGGCTCCGCTCCTGGATCACATCCACCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: AAGSPGAAVRLC*GSAPGSHPPPA
Trigger: AGCTGGAGGTGGATGTGATCCAGGAGCGGAGCCGCAACACAGTCTTACAGCAGCACCTGGAGACCCTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS GCA 72 bp GGCAAGGGCATGCTGGCAAAGCTGCTGGTCAGCACCTaGCGCAGGGTCTCCAGGTGCTGCTGTAAGACTGTG +
Preference number: 6 (lower is better)
Translates to: GKGMLAKLLVST*RRVSRCCCKTV
Trigger: CACAGTCTTACAGCAGCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCATGCCCTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS GCA 72 bp TCTCTCCACTTCCAGGCAAGGGCATGCTGGCAAAGCTaGTGGTCAGCACCTGCCGCAGGGTCTCCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: SLHFQARACWQS*WSAPAAGSPGA
Trigger: AGCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCATGCCCTTGCCTGGAAGTGGAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS CAA 72 bp TGCCGCAGGGTCTCCAGGTGCTGCTGTAAGACTGTGTaGCGGCTCCGCTCCTGGATCACATCCACCTCCAGC +
Preference number: 6 (lower is better)
Translates to: CRRVSRCCCKTV*RLRSWITSTSS
Trigger: GCTGGAGGTGGATGTGATCCAGGAGCGGAGCCGCAACACAGTCTTACAGCAGCACCTGGAGACCCTGCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS TCA 72 bp GCGTCCTCGAAAACATATTCTGTATTCGATGACGGCTaGCCTAGCGGGCCCCGACGCCCAAATGGGCCCAGA +
Preference number: 6 (lower is better)
Translates to: ASSKTYSVFDDG*PSGPRRPNGPR
Trigger: TCTGGGCCCATTTGGGCGTCGGGGCCCGCTAGGTCAGCCGTCATCGAATACAGAATATGTTTTCGAGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560498.5
CDS CAA 90 bp TCCACGTGCTTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTaGGATTTGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: STCFCRAAFLSSNSM*DLRSWRSSASRAED
Trigger: GTCCTCAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS CAA 72 bp AGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTaGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: RAAFLSSNSMLD*RSWRSSASRAE
Trigger: CTCAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS CAA 90 bp CACCTCCAGCTTCTCCACTGCTGTGCGCATGCTCTCCACGTGCTTTaGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTTGCG +
Preference number: 6 (lower is better)
Translates to: HLQLLHCCAHALHVL*QGCIPLLKLHVGFA
Trigger: CGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGCTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS TCA 72 bp GGATTTGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTaGGGACATACATCCCACAGAACACATGCAGCACTA +
Preference number: 6 (lower is better)
Translates to: GFAKLAELCFPS*GHTSHRTHAAL
Trigger: TAGTGCTGCATGTGTTCTGTGGGATGTATGTCCTCAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS CCA 72 bp TTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTTaGATTTGCGAAGCTGGCGGAGCTCTGCTTCCCGAG +
Preference number: 6 (lower is better)
Translates to: FAGLHSSPQTPC*ICEAGGALLPE
Trigger: CTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS CAA 72 bp AGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTaGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTTTG +
Preference number: 6 (lower is better)
Translates to: RAAFLSSNSMLD*RSWRSSASRAL
Trigger: CAAAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS CAA 90 bp TCCACGTGCTTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTaGGATTTGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTTTGCTA +
Preference number: 6 (lower is better)
Translates to: STCFCRAAFLSSNSM*DLRSWRSSASRALL
Trigger: TAGCAAAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS GCA 72 bp TTCTCCACTGCTGTGCGCATGCTCTCCACGTGCTTTTaGAGGGCTGCATTCCTCTCCTCAAACTCCATGTTG +
Preference number: 6 (lower is better)
Translates to: FSTAVRMLSTCF*RAAFLSSNSML
Trigger: CAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAGCATGCGCACAGCAGTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS CAA 72 bp TTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTaGGATTTGCGAAGCTGGCGGAGCTCTGCTTCCCGA +
Preference number: 6 (lower is better)
Translates to: FCRAAFLSSNSM*DLRSWRSSASR
Trigger: TCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558845.1
ENST00000559728.1
CDS CAA 90 bp TGCTTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTaGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTTTGCTATGGTTC +
Preference number: 6 (lower is better)
Translates to: CFCRAAFLSSNSMLD*RSWRSSASRALLWF
Trigger: GAACCATAGCAAAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS CAA 90 bp TGCTTTTGCAGGGCTGCATTCCTCTCCTCAAACTCCATGTTGGATTaGCGAAGCTGGCGGAGCTCTGCTTCCCGAGCTGAGGACATACAT +
Preference number: 6 (lower is better)
Translates to: CFCRAAFLSSNSMLD*RSWRSSASRAEDIH
Trigger: ATGTATGTCCTCAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS TCA 72 bp CCCCAATGCGGCGAAGGACTACGTGGTTACGCAAGGTaGGCCTTATTTTCGTGGAGGTTTCTGGGAGATGTA +
Preference number: 6 (lower is better)
Translates to: PQCGEGLRGYAR*ALFSWRFLGDV
Trigger: TACATCTCCCAGAAACCTCCACGAAAATAAGGCTCACCTTGCGTAACCACGTAGTCCTTCGCCGCATTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560498.5
CDS CCA 72 bp TTCCTCTCCTCAAACTCCATGTTGGATTTGCGAAGCTaGCGGAGCTCTGCTTCCCGAGCTTTGCTATGGTTC +
Preference number: 6 (lower is better)
Translates to: FLSSNSMLDLRS*RSSASRALLWF
Trigger: GAACCATAGCAAAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS CCA 72 bp TTCCTCTCCTCAAACTCCATGTTGGATTTGCGAAGCTaGCGGAGCTCTGCTTCCCGAGCTGAGGACATACAT +
Preference number: 6 (lower is better)
Translates to: FLSSNSMLDLRS*RSSASRAEDIH
Trigger: ATGTATGTCCTCAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS CAA 72 bp GCTGCTTACCCAGTGGTAGCCAGATCATTACTCTCCTaGGAACCGTCTTCATCTGCAAAAAGGGGCGGTAGG +
Preference number: 6 (lower is better)
Translates to: AAYPVVARSLLS*EPSSSAKRGGR
Trigger: CCTACCGCCCCTTTTTGCAGATGAAGACGGTTCCAAGGAGAGTAATGATCTGGCTACCACTGGGTAAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558176.1
CDS CAA 90 bp CCTAAAGCAGCTGCTTACCCAGTGGTAGCCAGATCATTACTCTCCTaGGAACCGTCTTCATCTGCAAAAAGGGGCGGTAGGGTGGAGCTA +
Preference number: 6 (lower is better)
Translates to: PKAAAYPVVARSLLS*EPSSSAKRGGRVEL
Trigger: TAGCTCCACCCTACCGCCCCTTTTTGCAGATGAAGACGGTTCCAAGGAGAGTAATGATCTGGCTACCACTGGGTAAGCAGCTGCTTTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558176.1
CDS TCA 72 bp ATCCCACAGAACACATGCAGCACTAGAAGGAGTCTCTaGGGAGTCCCAATGACTCTTACAGGGAAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: IPQNTCSTRRSL*GVPMTLTGKFC
Trigger: GCAGAACTTCCCTGTAAGAGTCATTGGGACTCCTCAGAGACTCCTTCTAGTGCTGCATGTGTTCTGTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559728.1
CDS CCA 72 bp CTTGAGAGAGATCCTCCACAAATTCTGGATTGTTGGTaGATGATGTGGCGCCACTACTGTATGGAACCTCTG +
Preference number: 6 (lower is better)
Translates to: LERDPPQILDCW*MMWRHYCMEPL
Trigger: CAGAGGTTCCATACAGTAGTGGCGCCACATCATCCACCAACAATCCAGAATTTGTGGAGGATCTCTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558176.1
ENST00000558651.5
ENST00000559035.5
ENST00000559099.5
ENST00000560498.5
ENST00000560867.1
ENST00000560986.1
CDS CCA 72 bp GACCTTGAGAGAGATCCTCCACAAATTCTGGATTGTTaGTGGATGATGTGGCGCCACTACTGTATGGAACCT +
Preference number: 6 (lower is better)
Translates to: DLERDPPQILDC*WMMWRHYCMEP
Trigger: AGGTTCCATACAGTAGTGGCGCCACATCATCCACCAACAATCCAGAATTTGTGGAGGATCTCTCTCAAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558176.1
ENST00000558651.5
ENST00000559035.5
ENST00000559099.5
ENST00000560498.5
ENST00000560867.1
ENST00000560986.1
CDS CCA 72 bp GTTCCTTTACCTCTGTTTCTTTCTCATGATCATGAGTaGCCTGCCGGGCTGCATCTTGCCTATGAGATTTGC +
Preference number: 6 (lower is better)
Translates to: VPLPLFLSHDHE*PAGLHLAYEIC
Trigger: GCAAATCTCATAGGCAAGATGCAGCCCGGCAGGCCACTCATGATCATGAGAAAGAAACAGAGGTAAAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS CAA 90 bp CCTTGTGATTTCTGGAAATGGGACTTCTGGTCTCTTTGCTCGAAGTaGTTCTCGACGCTCATTCATGAACCGAACATATCCTGTAAGGGG +
Preference number: 6 (lower is better)
Translates to: PCDFWKWDFWSLCSK*FSTLIHEPNISCKG
Trigger: CCCCTTACAGGATATGTTCGGTTCATGAATGAGCGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGAAATCACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558651.5
ENST00000559099.5
ENST00000560867.1
CDS CCA 72 bp GATCCTCCACAAATTCTGGATTGTTGGTGGATGATGTaGCGCCACTACTGTATGGAACCTCTGGGTGATTTA +
Preference number: 6 (lower is better)
Translates to: DPPQILDCWWMM*RHYCMEPLGDL
Trigger: TAAATCACCCAGAGGTTCCATACAGTAGTGGCGCCACATCATCCACCAACAATCCAGAATTTGTGGAGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558176.1
ENST00000558651.5
ENST00000559035.5
ENST00000559099.5
ENST00000560498.5
ENST00000560867.1
ENST00000560986.1
CDS CCA 72 bp AATCGCCTTCACTTCACGCACTCGTCGTCTCACAGCTaGACAAAAATTCTTCCGCAGCACTTTATTTTGGTG +
Preference number: 6 (lower is better)
Translates to: NRLHFTHSSSHS*TKILPQHFILV
Trigger: CACCAAAATAAAGTGCTGCGGAAGAATTTTTGTCCAGCTGTGAGACGACGAGTGCGTGAAGTGAAGGCGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381714.7
CDS CAA 72 bp TTTCCACGGTACCTTCACAAAAATGAAGGGATTATTTaGCCCCAATGCGGCGAAGGACTACGTGGTTACGCA +
Preference number: 6 (lower is better)
Translates to: FPRYLHKNEGII*PQCGEGLRGYA
Trigger: TGCGTAACCACGTAGTCCTTCGCCGCATTGGGGCAAAATAATCCCTTCATTTTTGTGAAGGTACCGTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381714.7
CDS TCA 72 bp GAGATTTGCCTTTCTGACGGTCCTGGGTTTTCCTACTaGAGACCTTGTAGGCCTCTGTTTTCTGATACTGTT +
Preference number: 6 (lower is better)
Translates to: EICLSDGPGFSY*RPCRPLFSDTV
Trigger: AACAGTATCAGAAAACAGAGGCCTACAAGGTCTTCAGTAGGAAAACCCAGGACCGTCAGAAAGGCAAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336216.9
ENST00000381714.7
CDS TCA 72 bp GTCTCTTTGCTCGAAGTTGTTCTCGACGCTCATTCATaGACCGAACATATCCTCATCTTCATGCCTCTGTTC +
Preference number: 6 (lower is better)
Translates to: VSLLEVVLDAHS*TEHILIFMPLF
Trigger: GAACAGAGGCATGAAGATGAGGATATGTTCGGTTCATGAATGAGCGTCGAGAACAACTTCGAGCAAAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558176.1
ENST00000559035.5
CDS CAA 72 bp TTCTGGAAATGGGACTTCTGGTCTCTTTGCTCGAAGTaGTTCTCGACGCTCATTCATGAACCGAACATATCC +
Preference number: 6 (lower is better)
Translates to: FWKWDFWSLCSK*FSTLIHEPNIS
Trigger: GGATATGTTCGGTTCATGAATGAGCGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336216.9
ENST00000381714.7
ENST00000558176.1
ENST00000558651.5
ENST00000559035.5
ENST00000559099.5
ENST00000560867.1
CDS CAA 90 bp CCTTGTGATTTCTGGAAATGGGACTTCTGGTCTCTTTGCTCGAAGTaGTTCTCGACGCTCATTCATGAACCGAACATATCCTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: PCDFWKWDFWSLCSK*FSTLIHEPNISSSS
Trigger: TGAAGATGAGGATATGTTCGGTTCATGAATGAGCGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGAAATCACAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558176.1
ENST00000559035.5
CDS TCA 72 bp CACTTGTCTCTAGGTACTACTCAGCTACAAGAAAGGTaGCAGACAGGTAGGGTAATTCTTCCACTGTATATT +
Preference number: 6 (lower is better)
Translates to: HLSLGTTQLQER*QTGRVILPLYI
Trigger: AATATACAGTGGAAGAATTACCCTACCTGTCTGTCACCTTTCTTGTAGCTGAGTAGTACCTAGAGACAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558288.1
CDS TCA 72 bp AAAGCAACTATCAGGGACAAACCTGAGGAGGGAAAATaGGTACCCTACTTTAGTCTGAAGAATGTATGGTCA +
Preference number: 6 (lower is better)
Translates to: KATIRDKPEEGK*VPYFSLKNVWS
Trigger: TGACCATACATTCTTCAGACTAAAGTAGGGTACTCATTTTCCCTCCTCAGGTTTGTCCCTGATAGTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558288.1
CDS TCA 72 bp CTTCATTATGTAACCAAGATGGTGTATGGTGTCAAGTaGTGTGTAGCTTTGCTTTATAGAATTTTACAGTCC +
Preference number: 6 (lower is better)
Translates to: LHYVTKMVYGVK*CVALLYRILQS
Trigger: GGACTGTAAAATTCTATAAAGCAAAGCTACACATCACTTGACACCATACACCATCTTGGTTACATAATGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381714.7