RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HLTF (Homo sapiens)

Ensembl gene IDs: ENSG00000071794

Ensembl transcript IDs: ENST00000310053.10, ENST00000392912.6, ENST00000465259.5, ENST00000467858.1, ENST00000481663.1, ENST00000493881.1, ENST00000494055.5, ENST00000497427.1

Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAATATTCAAATCAAATTaGGTAGGACTGGTTTGCCTC +
Preference number: 2 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSIFKSN*VGLVCL
Trigger: GAGGCAAACCAGTCCTACCCAATTTGATTTGAATAT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
3UTR-3UTR GCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCAAGGACTACAAACACTaGATCACAAATCGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCKDYKH*ITNRRL
Trigger: AAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTT...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
3UTR CAA 90 bp TTGTTTACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTaGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTC +
Preference number: 2 (lower is better)
Translates to: LFTFRIKMSLRVETT*EIIQPNFHPDITPL
Trigger: GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGTAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
3UTR-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGTGCTAACCTGGACTTaGGTCTCATTTAAGATTTGG +
Preference number: 3 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSVLTWT*VSFKIW
Trigger: CCAAATCTTAAATGAGACCAAAGTCCAGGTTAGCAC...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
3UTR-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAATATTCAAATCAAATaGGGTAGGACTGGTTTGCCT +
Preference number: 3 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSNIQIK*GRTGLP
Trigger: AGGCAAACCAGTCCTACCCAATTTGATTTGAATATT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGCGCCTCGGCTCCCCTaGATCGTTTTCGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSAPRLP*IVFEPP
Trigger: AGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGC...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTCAGGAGCGCACGACTaGAAGGTAAGTCGCCGCGAG +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVSGAHD*KVSRRE
Trigger: CTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGA...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCCCTTCTGCAACAATCTaGGAGACCAGCGTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLPSATI*ETSVAL
Trigger: CAGAGCGACGCTGGTCTCCCAGATTGTTGCAGAAGG...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR TCA 90 bp ATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTTCAGGAGCGCACGACTaGAAGGTAAGTCGCCGCGAG +
Preference number: 4 (lower is better)
Translates to: IQPNFHPDITPLTYSSLTSGAHD*KVSRRE
Trigger: CTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGA...AGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAACTGGATCCCTCTTaGACATCCAGGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLKLDPS*TSRTWR
Trigger: GCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCGCGCCTCGGCTCCCCTaGATCGTTTTCGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPAPRLP*IVFEPP
Trigger: AGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGC...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCAGGCCCCGCAGCCCTaGAGCCGGGGACAAATTCCG +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQQAPQP*SRGQIP
Trigger: CGGAATTTGTCCCCGGCTTCAGGGCTGCGGGGCCTG...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAAACTGGATCCCTCTTaGACATCCAGGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSKLDPS*TSRTWR
Trigger: GCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATGGGTAGGACTGGTTTaGCTCTCACTCCCACAGACT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSWVGLV*LSLPQT
Trigger: AGTCTGTGGGAGTGAGAGGCAAACCAGTCCTACCCA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR GCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCGACGCCGTCTCCTTCTaGAACAATCTGGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVDAVSF*NNLGDQ
Trigger: CTGGTCTCCCAGATTGTTGCAGAAGGAGACGGCGTC...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAACATCAGTTTTCTTTaGCCCCTCCACTGCACAAGC +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLNISFL*PLHCTS
Trigger: GCTTGTGCAGTGGAGGGGTCAAAGAAAACTGATGTT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCCTTCATCTCCCATTGTaGCAGGACGCTGTATTGTTC +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLLHLPL*QDAVLF
Trigger: GAACAATACAGCGTCCTGTCACAATGGGAGATGAAG...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAGACCCAGGACATCTaGATAATGTGCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLKTQDI*IMCQDS
Trigger: ACTGTCCTGGCACATTATGCAGATGTCCTGGGTCTT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGGCGCCTCGGCTCCCCTaGATCGTTTTCGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQAPRLP*IVFEPP
Trigger: AGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGC...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCTACTGCAGCATGCACTaGCATACTATAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLYCSMH*HTIAWS
Trigger: GGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTA...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTCAGGAGCGCACGACTaGAAGGTAAGTCGCCGCGAG +
Preference number: 4 (lower is better)
Translates to: SLYILFTRTTNTASQIGGSGAHD*KVSRRE
Trigger: CTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGA...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTAAACTGGATCCCTCTTaGACATCCAGGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTKLDPS*TSRTWR
Trigger: GCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTT...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCCGTGGAAAATTTCCATaGACTCCATACTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLRGKFP*TPYWTV
Trigger: GACTGTCCAGTATGGAGTTCATGGAAATTTTCCACG...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCCCAATTTGTTGTCCATaGTATAGGCCAAAGCACCTG +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLPICCP*YRPKHL
Trigger: CAGGTGCTTTGGCCTATATCATGGACAACAAATTGG...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCGCTGCTCATTCTGAATaGCTTGGCAAATACAGGGTT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLAAHSE*LGKYRV
Trigger: AACCCTGTATTTGCCAAGTCATTCAGAATGAGCAGC...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATACTGCAGCATGCACTaGCATACTATAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSYCSMH*HTIAWS
Trigger: GGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCTTGATGTGGAAGCAGTaGTGTTTCAATAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLLMWKQ*CFNSLS
Trigger: GCTGAGGCTATTGAAACACCACTGCTTCCACATCAA...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCGAGTTGAAACGACTTTaGAGATCATCCAGCCCAACT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLELKRL*RSSSPT
Trigger: AGTTGGGCTGGATGATCTCCAAAGTCGTTTCAACTC...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGTCAGGAGCGCACGACTaGAAGGTAAGTCGCCGCGAG +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQSGAHD*KVSRRE
Trigger: CTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGA...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACGTGGAAAATTTCCATaGACTCCATACTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSRGKFP*TPYWTV
Trigger: GACTGTCCAGTATGGAGTTCATGGAAATTTTCCACG...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCGGAGCTAGACAATTCTaGCATGCGAAACTTACTCTT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLGARQF*HAKLTL
Trigger: AAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCC...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAAACATCAGTTTTCTTTaGCCCCTCCACTGCACAAGC +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVNISFL*PLHCTS
Trigger: GCTTGTGCAGTGGAGGGGTCAAAGAAAACTGATGTT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACAGCTTTTGTCTGCTaGGCATTTGGATTTCGTATG +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLTAFVC*AFGFRM
Trigger: CATACGAAATCCAAATGCTCAGCAGACAAAAGCTGT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGCTGCTCATTCTGAATaGCTTGGCAAATACAGGGTT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSAAHSE*LGKYRV
Trigger: AACCCTGTATTTGCCAAGTCATTCAGAATGAGCAGC...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAAAGACCCAGGACATCTaGATAATGTGCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVKTQDI*IMCQDS
Trigger: ACTGTCCTGGCACATTATGCAGATGTCCTGGGTCTT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCTCGCTGTTCCCAGAATaGTGGAAGTTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLSLFPE*WKFFAI
Trigger: AATAGCAAAGAACTTCCACCATTCTGGGAACAGCGA...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGCTAAAATTCCTCCATaGACATTTTCTGGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSAKIPP*TFSGRS
Trigger: GGACCGACCAGAAAATGTCCATGGAGGAATTTTAGC...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGAGGTCTGCCATCATaGAAGTTGGTAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLRGLPS*KLVRIT
Trigger: AGTAATCCTTACCAACTTCCATGATGGCAGACCTCT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCCATTTGGATTTCGTATaGCATGTCCTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLHLDFV*HVLHPG
Trigger: TCCTGGATGAAGGACATGCCATACGAAATCCAAATG...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGAGTTGAAACGACTTTaGAGATCATCCAGCCCAACT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSELKRL*RSSSPT
Trigger: AGTTGGGCTGGATGATCTCCAAAGTCGTTTCAACTC...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTACGTGGAAAATTTCCATaGACTCCATACTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVRGKFP*TPYWTV
Trigger: GACTGTCCAGTATGGAGTTCATGGAAATTTTCCACG...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCCGTAGTCCAACCACATaGCCTCTCAAACTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVRSPTT*PLKLPN
Trigger: ATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACG...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCGCTAGAGCTTGTTTTTaGTGTGGAAGCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVARACF*CGSSGV
Trigger: AACACCACTGCTTCCACATCAAAAACAAGCTCTAGC...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGCTGCTCATTCTGAATaGCTTGGCAAATACAGGGTT +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVAAHSE*LGKYRV
Trigger: AACCCTGTATTTGCCAAGTCATTCAGAATGAGCAGC...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTGTGGCTGCTCATTCTaGATGACTTGGCAAATACAG +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVCGCSF*MTWQIQ
Trigger: CTGTATTTGCCAAGTCATTCAGAATGAGCAGCCACA...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAATAACTTCTTGCTTCTaGCCAAGTCTATGGCATCTG +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSITSCF*PSLWHL
Trigger: CAGATGCCATAGACTTGGTCAGAAGCAAGAAGTTAT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCAGTTGTCATCTGTACTaGAGCATGCACTGGCATACT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVSCHLY*SMHWHT
Trigger: AGTATGCCAGTGCATGCTGCAGTACAGATGACAACT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCGTATGGCAACAAATTTaGCGCAGTCTAAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLVWQQI*RSLSKR
Trigger: TCTTTTGCTTAGACTGCGGCAAATTTGTTGCCATAC...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCGCCATTGGAAGACACTaGATTTGTAAGAAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLAIGRH*ICKKVS
Trigger: ACTTACCTTCTTACAAATGCAGTGTCTTCCAATGGC...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTATTGATGTGGAAGCAGTaGTGTTTCAATAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVLMWKQ*CFNSLS
Trigger: GCTGAGGCTATTGAAACACCACTGCTTCCACATCAA...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATCGCTGTTCCCAGAATaGTGGAAGTTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSSLFPE*WKFFAI
Trigger: AATAGCAAAGAACTTCCACCATTCTGGGAACAGCGA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAGAGGTCTGCCATCATaGAAGTTGGTAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSRGLPS*KLVRIT
Trigger: AGTAATCCTTACCAACTTCCATGATGGCAGACCTCT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATTTGGATTTCGTATaGCATGTCCTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSHLDFV*HVLHPG
Trigger: TCCTGGATGAAGGACATGCCATACGAAATCCAAATG...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCTCAACTCTTTTCTTTTaGGCCATGGAACCATCCAAA +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLSTLFF*AMEPSK
Trigger: TTTGGATGGTTCCATGGCCCAAAAGAAAAGAGTTGA...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCGAGTTGAAACGACTTTaGAGATCATCCAGCCCAACT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVELKRL*RSSSPT
Trigger: AGTTGGGCTGGATGATCTCCAAAGTCGTTTCAACTC...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACAAACTGGATCCCTCTTaGACATCCAGGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNKLDPS*TSRTWR
Trigger: GCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTT...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAAAGAAAGTTGGATATaGGAGGCGTGGAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSKESWI*EAWKIS
Trigger: GGAAATTTTCCACGCCTCTCATATCCAACTTTCTTT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACTTACTCTTCTCCTTaGTATCTGAAATACTGGGTT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLTYSSP*YLKYWV
Trigger: AACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCGGAGCTAGACAATTCTaGCATGCGAAACTTACTCTT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVGARQF*HAKLTL
Trigger: AAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCC...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCACAGCTTTTGTCTGCTaGGCATTTGGATTTCGTATG +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVTAFVC*AFGFRM
Trigger: CATACGAAATCCAAATGCTCAGCAGACAAAAGCTGT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCCTTCATCTCCCATTGTaGCAGGACGCTGTATTGTTC +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCLHLPL*QDAVLF
Trigger: GAACAATACAGCGTCCTGTCACAATGGGAGATGAAG...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR TCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGAAATACGAAAAAGCTaGGTACTTGGAAGATACGTG +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSEIRKS*VLGRYV
Trigger: CACGTATCTTCCAAGTACTCAGCTTTTTCGTATTTC...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGGTCTGACCTTATTTaGAATACGAAAAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLRSDLI*NTKKLS
Trigger: ACTCAGCTTTTTCGTATTTCAAATAAGGTCAGACCT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCGATGTCTTTAAGAGTTaGAACGACTTTGGAGATCAT +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLDVFKS*NDFGDH
Trigger: ATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATC...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGTTGGTAAGGATTACTaGAATGGCCGTAAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSVGKDY*NGRKSF
Trigger: AAAACTCTTACGGCCATTGCAGTAATCCTTACCAAC...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATTTCCTCTGAATCACTaGTTTCTATGTACTGGACAG +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSFPLNH*FLCTGQ
Trigger: CTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCCGCTGTATTGTTCTATaGCACCATTCTCTATCAATA +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLRCIVL*HHSLSI
Trigger: TATTGATAGAGAATGGTGGCATAGAACAATACAGCG...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGTATGGCAACAAATTTaGCGCAGTCTAAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSVWQQI*RSLSKR
Trigger: TCTTTTGCTTAGACTGCGGCAAATTTGTTGCCATAC...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCAAGGACTACAAACACTaGATCACAAATCGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVKDYKH*ITNRRL
Trigger: AAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR GCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACTGGGTAGGACTGGTTTaGCTCTCACTCCCACAGACT +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNWVGLV*LSLPQT
Trigger: AGTCTGTGGGAGTGAGAGGCAAACCAGTCCTACCCA...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR GCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCCACTATCATCCCTaGAGAAAGGTCTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVFHYHP*RKVLVL
Trigger: CAAAACCAAGACCTTTCTGCAGGGATGATAGTGGAA...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR GCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATCTCACTGAAGTATTaGTATATGGAGAACCCATAC +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLISLKY*YMENPY
Trigger: GTATGGGTTCTCCATATAGCAATACTTCAGTGAGAT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATTCAATAGCCTCAGCTaGTTCCATTTCATGGGTTTT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSFNSLS*FHFMGF
Trigger: AAAACCCATGAAATGGAACCAGCTGAGGCTATTGAA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp ATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTTTGATGTGGAAGCAGTaGTGTTTCAATAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IQPNFHPDITPLTYSSLTLMWKQ*CFNSLS
Trigger: GCTGAGGCTATTGAAACACCACTGCTTCCACATCAA...AGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR CCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTCCATGGACATTTTCTaGTCGGTCCTTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVSMDIF*SVLLRK
Trigger: TTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGA...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTGCTAAAATTCCTCCATaGACATTTTCTGGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTAKIPP*TFSGRS
Trigger: GGACCGACCAGAAAATGTCCATGGAGGAATTTTAGC...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR CCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAAGAGGTCTGCCATCATaGAAGTTGGTAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVRGLPS*KLVRIT
Trigger: AGTAATCCTTACCAACTTCCATGATGGCAGACCTCT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCGATCAGTGTTGTTCTTaGTCTCTCCTCAACATCAGT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVDQCCS*SLLNIS
Trigger: ACTGATGTTGAGGAGAGACCAAGAACAACACTGATC...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATCAACTCTTTTCTTTTaGGCCATGGAACCATCCAAA +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSSTLFF*AMEPSK
Trigger: TTTGGATGGTTCCATGGCCCAAAAGAAAAGAGTTGA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATATTCAAATCAAATTaGGTAGGACTGGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLIFKSN*VGLVCL
Trigger: GAGGCAAACCAGTCCTACCCAATTTGATTTGAATAT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTACTTCTCCTTGATATCTaGAATACTGGGTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVLLLDI*NTGLFT
Trigger: AGTGAACAACCCAGTATTTCAGATATCAAGGAGAAG...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCCAGAAAGCGGACAGATaGTCAGTGTTGTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPQKADR*SVLFLV
Trigger: GACCAAGAACAACACTGATCATCTGTCCGCTTTCTG...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTACAGCTTTTGTCTGCTaGGCATTTGGATTTCGTATG +
Preference number: 4 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTTAFVC*AFGFRM
Trigger: CATACGAAATCCAAATGCTCAGCAGACAAAAGCTGT...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCCTTCATCTCCCATTGTaGCAGGACGCTGTATTGTTC +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPLHLPL*QDAVLF
Trigger: GAACAATACAGCGTCCTGTCACAATGGGAGATGAAG...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTATGGTGGAAGTTCTTTaGTATTTTCCCGTGACACCA +
Preference number: 4 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTMVEVL*YFPVTP
Trigger: TGGTGTCACGGGAAAATAGCAAAGAACTTCCACCAT...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR GCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTATTTCCTCTGAATCACTaGTTTCTATGTACTGGACAG +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVFPLNH*FLCTGQ
Trigger: CTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAA...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTACTCTTAGCCACCTTATaGTATGTAATGGACTATCTC +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVLLATL*YVMDYL
Trigger: GAGATAGTCCATTACATAGCATAAGGTGGCTAAGAG...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCCTCTTAGCCACCTTATaGTATGTAATGGACTATCTC +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVLLATL*YVMDYL
Trigger: GAGATAGTCCATTACATAGCATAAGGTGGCTAAGAG...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACGCTGTATTGTTCTATaGCACCATTCTCTATCAATA +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSRCIVL*HHSLSI
Trigger: TATTGATAGAGAATGGTGGCATAGAACAATACAGCG...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAAGTCAGTCAATGCGTaGATTAGCGCATTAATCTTT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSKSVNA*ISALIF
Trigger: AAAGATTAATGCGCTAATGCACGCATTGACTGACTT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCTACTGCAGCATGCACTaGCATACTATAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPYCSMH*HTIAWS
Trigger: GGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTA...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCTTGATGTGGAAGCAGTaGTGTTTCAATAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCLMWKQ*CFNSLS
Trigger: GCTGAGGCTATTGAAACACCACTGCTTCCACATCAA...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CCA 90 bp ATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTTCGCTGTTCCCAGAATaGTGGAAGTTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: IQPNFHPDITPLTYSSLTSLFPE*WKFFAI
Trigger: AATAGCAAAGAACTTCCACCATTCTGGGAACAGCGA...AGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR CCA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTTCCATGGACATTTTCTaGTCGGTCCTTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTSMDIF*SVLLRK
Trigger: TTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGA...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR CCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACTGCTTTCTATGTACTaGACAGCAGTTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSLLSMY*TAVFLL
Trigger: AAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAG...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCTCCTTTAAAGAATTCTaGATTGGAGTACCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLSFKEF*IGVPVK
Trigger: TTTGACAGGTACTCCAATCCAGAATTCTTTAAAGGA...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCCGTGGAAAATTTCCATaGACTCCATACTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPRGKFP*TPYWTV
Trigger: GACTGTCCAGTATGGAGTTCATGGAAATTTTCCACG...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCCCAATTTGTTGTCCATaGTATAGGCCAAAGCACCTG +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPPICCP*YRPKHL
Trigger: CAGGTGCTTTGGCCTATATCATGGACAACAAATTGG...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCGCTAGAGCTTGTTTTTaGTGTGGAAGCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPARACF*CGSSGV
Trigger: AACACCACTGCTTCCACATCAAAAACAAGCTCTAGC...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAACTTACTCTTCTCCTTaGTATCTGAAATACTGGGTT +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVTYSSP*YLKYWV
Trigger: AACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCGGAGCTAGACAATTCTaGCATGCGAAACTTACTCTT +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCGARQF*HAKLTL
Trigger: AAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCC...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR TCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAACAGAAAGCGGACAGATaGTCAGTGTTGTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQQKADR*SVLFLV
Trigger: GACCAAGAACAACACTGATCATCTGTCCGCTTTCTG...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCTGTGGCTGCTCATTCTaGATGACTTGGCAAATACAG +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPCGCSF*MTWQIQ
Trigger: CTGTATTTGCCAAGTCATTCAGAATGAGCAGCCACA...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCATAACTTCTTGCTTCTaGCCAAGTCTATGGCATCTG +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCITSCF*PSLWHL
Trigger: CAGATGCCATAGACTTGGTCAGAAGCAAGAAGTTAT...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR TCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCGATGTCTTTAAGAGTTaGAACGACTTTGGAGATCAT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVDVFKS*NDFGDH
Trigger: ATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATC...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTACCCCTTCAATTTGTaGCAATTTGTTGTCCATGAT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVYPFNL*QFVVHD
Trigger: ATCATGGACAACAAATTGGCACAAATTGAAGGGGTA...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCATGGTGGAAGTTCTTTaGTATTTTCCCGTGACACCA +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCMVEVL*YFPVTP
Trigger: TGGTGTCACGGGAAAATAGCAAAGAACTTCCACCAT...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR GCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACAAGACCCAGGACATCTaGATAATGTGCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNKTQDI*IMCQDS
Trigger: ACTGTCCTGGCACATTATGCAGATGTCCTGGGTCTT...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR GCA 90 bp ATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTGTATGGCAACAAATTTaGCGCAGTCTAAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: IQPNFHPDITPLTYSSLTVWQQI*RSLSKR
Trigger: TCTTTTGCTTAGACTGCGGCAAATTTGTTGCCATAC...AGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR GCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCAAGTCAGTCAATGCGTaGATTAGCGCATTAATCTTT +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVKSVNA*ISALIF
Trigger: AAAGATTAATGCGCTAATGCACGCATTGACTGACTT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATATAGTTGGAGATCCTaGTTCAGTGTTTTGAAAACA +
Preference number: 4 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSYSWRS*FSVLKT
Trigger: TGTTTTCAAAACACTGAAGCAGGATCTCCAACTATA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCTTCCACTATCATCCCTaGAGAAAGGTCTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCFHYHP*RKVLVL
Trigger: CAAAACCAAGACCTTTCTGCAGGGATGATAGTGGAA...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACTACTGCAGCATGCACTaGCATACTATAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNYCSMH*HTIAWS
Trigger: GGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTA...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAAGCTTGTTTTTGATGTaGAAGCAGTGGTGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVSLFLM*KQWCFN
Trigger: ATTGAAACACCACTGCTTCCACATCAAAAACAAGCT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCTCGCTGTTCCCAGAATaGTGGAAGTTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCSLFPE*WKFFAI
Trigger: AATAGCAAAGAACTTCCACCATTCTGGGAACAGCGA...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTACTGCTTTCTATGTACTaGACAGCAGTTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVLLSMY*TAVFLL
Trigger: AAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAG...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAATATGTTGTCCAAACTaGTCAATCCAGTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVICCPN*SIQLLN
Trigger: GTTAAGCAACTGGATTGACCAGTTTGGACAACATAT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCCATTTGGATTTCGTATaGCATGTCCTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCHLDFV*HVLHPG
Trigger: TCCTGGATGAAGGACATGCCATACGAAATCCAAATG...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CCA 90 bp ATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTTCAACTCTTTTCTTTTaGGCCATGGAACCATCCAAA +
Preference number: 4 (lower is better)
Translates to: IQPNFHPDITPLTYSSLTSTLFF*AMEPSK
Trigger: TTTGGATGGTTCCATGGCCCAAAAGAAAAGAGTTGA...AGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR TCA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCCGTAGTCCAACCACATaGCCTCTCAAACTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SLYILFTRTTNTASQIGGRSPTT*PLKLPN
Trigger: ATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACG...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAACGTAGTCCAACCACATaGCCTCTCAAACTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQRSPTT*PLKLPN
Trigger: ATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACG...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR TCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACGCTAGAGCTTGTTTTTaGTGTGGAAGCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNARACF*CGSSGV
Trigger: AACACCACTGCTTCCACATCAAAAACAAGCTCTAGC...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAAGCTAGAGCTTGTTTTTaGTGTGGAAGCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQARACF*CGSSGV
Trigger: AACACCACTGCTTCCACATCAAAAACAAGCTCTAGC...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR TCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGAACATCAGTTTTCTTTaGCCCCTCCACTGCACAAGC +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQNISFL*PLHCTS
Trigger: GCTTGTGCAGTGGAGGGGTCAAAGAAAACTGATGTT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCACAGCTTTTGTCTGCTaGGCATTTGGATTTCGTATG +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPTAFVC*AFGFRM
Trigger: CATACGAAATCCAAATGCTCAGCAGACAAAAGCTGT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp CATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTAAAATCCCACAAAGTTGTCATCTGTACTaGAGCATGCACTGGCATACT +
Preference number: 4 (lower is better)
Translates to: HPDITPLTYSSLLTKIPQSCHLY*SMHWHT
Trigger: AGTATGCCAGTGCATGCTGCAGTACAGATGACAACT...TTGTGGGATTTTAGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR GCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCATGGTGGAAGTTCTTTaGTATTTTCCCGTGACACCA +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPMVEVL*YFPVTP
Trigger: TGGTGTCACGGGAAAATAGCAAAGAACTTCCACCAT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCTTTCCTCTGAATCACTaGTTTCTATGTACTGGACAG +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCFPLNH*FLCTGQ
Trigger: CTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAA...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR GCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGAAGACCCAGGACATCTaGATAATGTGCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQKTQDI*IMCQDS
Trigger: ACTGTCCTGGCACATTATGCAGATGTCCTGGGTCTT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCGCCATTGGAAGACACTaGATTTGTAAGAAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCAIGRH*ICKKVS
Trigger: ACTTACCTTCTTACAAATGCAGTGTCTTCCAATGGC...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR GCA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTATAGTTGGAGATCCTaGTTCAGTGTTTTGAAAACA +
Preference number: 4 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVYSWRS*FSVLKT
Trigger: TGTTTTCAAAACACTGAAGCAGGATCTCCAACTATA...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCGGAGGGATAACATCTTaGAATTCAAAACGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCGGITS*NSKRGK
Trigger: CTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCC...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCTCCATGGACATTTTCTaGTCGGTCCTTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPSMDIF*SVLLRK
Trigger: TTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGA...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCGCTAAAATTCCTCCATaGACATTTTCTGGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SLYILFTRTTNTASQIGGAKIPP*TFSGRS
Trigger: GGACCGACCAGAAAATGTCCATGGAGGAATTTTAGC...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAAGCTAAAATTCCTCCATaGACATTTTCTGGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQAKIPP*TFSGRS
Trigger: GGACCGACCAGAAAATGTCCATGGAGGAATTTTAGC...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCGATCAGTGTTGTTCTTaGTCTCTCCTCAACATCAGT +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPDQCCS*SLLNIS
Trigger: ACTGATGTTGAGGAGAGACCAAGAACAACACTGATC...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCTCAACTCTTTTCTTTTaGGCCATGGAACCATCCAAA +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCSTLFF*AMEPSK
Trigger: TTTGGATGGTTCCATGGCCCAAAAGAAAAGAGTTGA...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCAAAGAAAGTTGGATATaGGAGGCGTGGAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPKESWI*EAWKIS
Trigger: GGAAATTTTCCACGCCTCTCATATCCAACTTTCTTT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCGTAGTCCAACCACATaGCCTCTCAAACTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQRSPTT*PLKLPN
Trigger: ATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACG...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCCTTCTCCTTGATATCTaGAATACTGGGTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPLLLDI*NTGLFT
Trigger: AGTGAACAACCCAGTATTTCAGATATCAAGGAGAAG...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGTGTGGCTGCTCATTCTaGATGACTTGGCAAATACAG +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQCGCSF*MTWQIQ
Trigger: CTGTATTTGCCAAGTCATTCAGAATGAGCAGCCACA...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACATAACTTCTTGCTTCTaGCCAAGTCTATGGCATCTG +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNITSCF*PSLWHL
Trigger: CAGATGCCATAGACTTGGTCAGAAGCAAGAAGTTAT...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAAATAACTTCTTGCTTCTaGCCAAGTCTATGGCATCTG +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQITSCF*PSLWHL
Trigger: CAGATGCCATAGACTTGGTCAGAAGCAAGAAGTTAT...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR GCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCTACCCCTTCAATTTGTaGCAATTTGTTGTCCATGAT +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCYPFNL*QFVVHD
Trigger: ATCATGGACAACAAATTGGCACAAATTGAAGGGGTA...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR GCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCAAGTCAGTCAATGCGTaGATTAGCGCATTAATCTTT +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCKSVNA*ISALIF
Trigger: AAAGATTAATGCGCTAATGCACGCATTGACTGACTT...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR GCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACTTCCACTATCATCCCTaGAGAAAGGTCTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNFHYHP*RKVLVL
Trigger: CAAAACCAAGACCTTTCTGCAGGGATGATAGTGGAA...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCGGAGGGATAACATCTTaGAATTCAAAACGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPGGITS*NSKRGK
Trigger: CTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCC...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCTTCAATAGCCTCAGCTaGTTCCATTTCATGGGTTTT +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPFNSLS*FHFMGF
Trigger: AAAACCCATGAAATGGAACCAGCTGAGGCTATTGAA...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTCCATGGACATTTTCTaGTCGGTCCTTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLYILFTRTTNTASQIGGSMDIF*SVLLRK
Trigger: TTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGA...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCATATGTTGTCCAAACTaGTCAATCCAGTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCICCPN*SIQLLN
Trigger: GTTAAGCAACTGGATTGACCAGTTTGGACAACATAT...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAACATTTGGATTTCGTATaGCATGTCCTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQHLDFV*HVLHPG
Trigger: TCCTGGATGAAGGACATGCCATACGAAATCCAAATG...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCCAGAAGCATTATAGTTaGAGATCCTGCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPQKHYS*RSCFSV
Trigger: AACACTGAAGCAGGATCTCCAACTATAATGCTTCTG...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
3UTR CAA 72 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTaGGAGATCATCCAGCCCAACTTCCATCCAGATATC +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETT*EIIQPNFHPDI
Trigger: GATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACCTTCTCCTTGATATCTaGAATACTGGGTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNLLLDI*NTGLFT
Trigger: AGTGAACAACCCAGTATTTCAGATATCAAGGAGAAG...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCACTTACTCTTCTCCTTaGTATCTGAAATACTGGGTT +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPTYSSP*YLKYWV
Trigger: AACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCGAAATACGAAAAAGCTaGGTACTTGGAAGATACGTG +
Preference number: 4 (lower is better)
Translates to: SLYILFTRTTNTASQIGGEIRKS*VLGRYV
Trigger: CACGTATCTTCCAAGTACTCAGCTTTTTCGTATTTC...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCGATGTCTTTAAGAGTTaGAACGACTTTGGAGATCAT +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPDVFKS*NDFGDH
Trigger: ATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATC...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGATGGTGGAAGTTCTTTaGTATTTTCCCGTGACACCA +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQMVEVL*YFPVTP
Trigger: TGGTGTCACGGGAAAATAGCAAAGAACTTCCACCAT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp CATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTAAAATCCCACAAGTTGGTAAGGATTACTaGAATGGCCGTAAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: HPDITPLTYSSLLTKIPQVGKDY*NGRKSF
Trigger: AAAACTCTTACGGCCATTGCAGTAATCCTTACCAAC...TTGTGGGATTTTAGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR GCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAAGTTGGTAAGGATTACTaGAATGGCCGTAAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQVGKDY*NGRKSF
Trigger: AAAACTCTTACGGCCATTGCAGTAATCCTTACCAAC...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR GCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACCTCTTAGCCACCTTATaGTATGTAATGGACTATCTC +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNLLATL*YVMDYL
Trigger: GAGATAGTCCATTACATAGCATAAGGTGGCTAAGAG...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR GCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACGTATGGCAACAAATTTaGCGCAGTCTAAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNVWQQI*RSLSKR
Trigger: TCTTTTGCTTAGACTGCGGCAAATTTGTTGCCATAC...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR GCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACGCCATTGGAAGACACTaGATTTGTAAGAAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNAIGRH*ICKKVS
Trigger: ACTTACCTTCTTACAAATGCAGTGTCTTCCAATGGC...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACTTCAATAGCCTCAGCTaGTTCCATTTCATGGGTTTT +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNFNSLS*FHFMGF
Trigger: AAAACCCATGAAATGGAACCAGCTGAGGCTATTGAA...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCCTGCTTTCTATGTACTaGACAGCAGTTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPLLSMY*TAVFLL
Trigger: AAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAG...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGGATCAGTGTTGTTCTTaGTCTCTCCTCAACATCAGT +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQDQCCS*SLLNIS
Trigger: ACTGATGTTGAGGAGAGACCAAGAACAACACTGATC...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCATATGTTGTCCAAACTaGTCAATCCAGTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPICCPN*SIQLLN
Trigger: GTTAAGCAACTGGATTGACCAGTTTGGACAACATAT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACCAGAAGCATTATAGTTaGAGATCCTGCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNQKHYS*RSCFSV
Trigger: AACACTGAAGCAGGATCTCCAACTATAATGCTTCTG...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCCAGAAGCATTATAGTTaGAGATCCTGCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SLYILFTRTTNTASQIGGQKHYS*RSCFSV
Trigger: AACACTGAAGCAGGATCTCCAACTATAATGCTTCTG...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAACAGAAGCATTATAGTTaGAGATCCTGCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQQKHYS*RSCFSV
Trigger: AACACTGAAGCAGGATCTCCAACTATAATGCTTCTG...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCATATTCAAATCAAATTaGGTAGGACTGGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPIFKSN*VGLVCL
Trigger: GAGGCAAACCAGTCCTACCCAATTTGATTTGAATAT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR TCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGAAAGAAAGTTGGATATaGGAGGCGTGGAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQKESWI*EAWKIS
Trigger: GGAAATTTTCCACGCCTCTCATATCCAACTTTCTTT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR TCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAAACTTACTCTTCTCCTTaGTATCTGAAATACTGGGTT +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQTYSSP*YLKYWV
Trigger: AACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGT...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR TCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACAGGTCTGACCTTATTTaGAATACGAAAAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNRSDLI*NTKKLS
Trigger: ACTCAGCTTTTTCGTATTTCAAATAAGGTCAGACCT...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR GCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAATACCCCTTCAATTTGTaGCAATTTGTTGTCCATGAT +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQYPFNL*QFVVHD
Trigger: ATCATGGACAACAAATTGGCACAAATTGAAGGGGTA...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR GCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGGTTGGTAAGGATTACTaGAATGGCCGTAAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQVGKDY*NGRKSF
Trigger: AAAACTCTTACGGCCATTGCAGTAATCCTTACCAAC...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCCGCTGTATTGTTCTATaGCACCATTCTCTATCAATA +
Preference number: 4 (lower is better)
Translates to: SLYILFTRTTNTASQIGGRCIVL*HHSLSI
Trigger: TATTGATAGAGAATGGTGGCATAGAACAATACAGCG...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR GCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAACGCTGTATTGTTCTATaGCACCATTCTCTATCAATA +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQRCIVL*HHSLSI
Trigger: TATTGATAGAGAATGGTGGCATAGAACAATACAGCG...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR GCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCTATAGTTGGAGATCCTaGTTCAGTGTTTTGAAAACA +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPYSWRS*FSVLKT
Trigger: TGTTTTCAAAACACTGAAGCAGGATCTCCAACTATA...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACATCTCACTGAAGTATTaGTATATGGAGAACCCATAC +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNISLKY*YMENPY
Trigger: GTATGGGTTCTCCATATAGCAATACTTCAGTGAGAT...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGTTCAATAGCCTCAGCTaGTTCCATTTCATGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQFNSLS*FHFMGF
Trigger: AAAACCCATGAAATGGAACCAGCTGAGGCTATTGAA...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCAGCTTGTTTTTGATGTaGAAGCAGTGGTGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: SLYILFTRTTNTASQIGGSLFLM*KQWCFN
Trigger: ATTGAAACACCACTGCTTCCACATCAAAAACAAGCT...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACAGCTTGTTTTTGATGTaGAAGCAGTGGTGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNSLFLM*KQWCFN
Trigger: ATTGAAACACCACTGCTTCCACATCAAAAACAAGCT...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCTCCTTTAAAGAATTCTaGATTGGAGTACCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPSFKEF*IGVPVK
Trigger: TTTGACAGGTACTCCAATCCAGAATTCTTTAAAGGA...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR GCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGAAGTCAGTCAATGCGTaGATTAGCGCATTAATCTTT +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQKSVNA*ISALIF
Trigger: AAAGATTAATGCGCTAATGCACGCATTGACTGACTT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCTGCTTTCTATGTACTaGACAGCAGTTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQLLSMY*TAVFLL
Trigger: AAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAG...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGATATGTTGTCCAAACTaGTCAATCCAGTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQICCPN*SIQLLN
Trigger: GTTAAGCAACTGGATTGACCAGTTTGGACAACATAT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CCA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTCCTTTAAAGAATTCTaGATTGGAGTACCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: SLYILFTRTTNTASQIGGSFKEF*IGVPVK
Trigger: TTTGACAGGTACTCCAATCCAGAATTCTTTAAAGGA...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CCA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAATCCTTTAAAGAATTCTaGATTGGAGTACCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQSFKEF*IGVPVK
Trigger: TTTGACAGGTACTCCAATCCAGAATTCTTTAAAGGA...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS CCA 90 bp CTTCCAAACTGGATCCCTCTTGAACATCCAGGACATGGCGCTGAGTaGGATGACAAGAGGAGCGCCTCGGCTCCCCTGGATCGTTTTCGA +
Preference number: 5 (lower is better)
Translates to: LPNWIPLEHPGHGAE*DDKRSASAPLDRFR
Trigger: TCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCATCCCACTCAGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000481663.1
ENST00000494055.5
CDS-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATTGGGTAGGACTGGTTaGCCTCTCACTCCCACAGAC +
Preference number: 5 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSLGRTG*PLTPTD
Trigger: GTCTGTGGGAGTGAGAGGCAAACCAGTCCTACCCAA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTACAAACTGGATCCCTCTaGAACATCCAGGACATGGCG +
Preference number: 5 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVQTGSL*NIQDMA
Trigger: CGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTG...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS CCA 90 bp TTCTGTTTTAAGCTGTTCAGTTGTCATCTGTACTGCAGCATGCACTaGCATACTATAGCTTGGTCCAGCTCTTCCAGAGCCCCAACCACT +
Preference number: 5 (lower is better)
Translates to: FCFKLFSCHLYCSMH*HTIAWSSSSRAPTT
Trigger: AGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGACAACTGAACAGCTTAAAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAATGGTGGAAGTTCTTaGCTATTTTCCCGTGACACC +
Preference number: 5 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLNGGSS*LFSRDT
Trigger: GGTGTCACGGGAAAATAGCAAAGAACTTCCACCATT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGCAGTTTTTCTTCTTTaGGGGCGGGAGCTAGACAAT +
Preference number: 5 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSAVFLL*GRELDN
Trigger: ATTGTCTAGCTCCCGCCCCAAAAGAAGAAAAACTGC...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATCTAGATGCGTCTTaGCTTAGTCCATCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSHLDAS*LSPSAF
Trigger: AAAGGCAGATGGACTAAGCAAAGACGCATCTAGATG...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGCAGTTTTTCTTCTTTaGGGGCGGGAGCTAGACAAT +
Preference number: 5 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVAVFLL*GRELDN
Trigger: ATTGTCTAGCTCCCGCCCCAAAAGAAGAAAAACTGC...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAGTATGGCAACAAATTaGCCGCAGTCTAAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLSMATN*PQSKQK
Trigger: CTTTTGCTTAGACTGCGGCAAATTTGTTGCCATACT...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCGTGCTAACCTGGACTTaGGTCTCATTTAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLVLTWT*VSFKIW
Trigger: CCAAATCTTAAATGAGACCAAAGTCCAGGTTAGCAC...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCCCCTATAACACAACATaGTCTCCGATCTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLPYNTT*SPISSF
Trigger: GAAAGATGAGATCGGAGACAATGTTGTGTTATAGGG...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCAATGGTGGAAGTTCTTaGCTATTTTCCCGTGACACC +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVNGGSS*LFSRDT
Trigger: GGTGTCACGGGAAAATAGCAAAGAACTTCCACCATT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCCTGCCATCATGGAAGTaGGTAAGGATTACTGCAATG +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVLPSWK*VRITAM
Trigger: CATTGCAGTAATCCTTACCAACTTCCATGATGGCAG...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCCATCTAGATGCGTCTTaGCTTAGTCCATCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVHLDAS*LSPSAF
Trigger: AAAGGCAGATGGACTAAGCAAAGACGCATCTAGATG...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAGTCAAGTACAGCTTTaGTCTGCTGAGCATTTGGAT +
Preference number: 5 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSSQVQL*SAEHLD
Trigger: ATCCAAATGCTCAGCAGACAAAAGCTGTACTTGACT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp GAAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCTTAAAGAATTCTGGATaGGAGTACCTGTCAAAACCC +
Preference number: 5 (lower is better)
Translates to: ETTLEIIQPNFHPDITPLLKNSG*EYLSKP
Trigger: GGGTTTTGACAGGTACTCCAATCCAGAATTCTTTAA...GAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACCAAACTGGATCCCTCTaGAACATCCAGGACATGGCG +
Preference number: 5 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNQTGSL*NIQDMA
Trigger: CGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTG...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCCAAACTGGATCCCTCTaGAACATCCAGGACATGGCG +
Preference number: 5 (lower is better)
Translates to: SLYILFTRTTNTASQIGGQTGSL*NIQDMA
Trigger: CGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTG...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATGGAGGGATAACATCTaGGAATTCAAAACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSWRDNI*EFKTWK
Trigger: TTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTAATGGTGGAAGTTCTTaGCTATTTTCCCGTGACACC +
Preference number: 5 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTNGGSS*LFSRDT
Trigger: GGTGTCACGGGAAAATAGCAAAGAACTTCCACCATT...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR CAA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCGCAGTTTTTCTTCTTTaGGGGCGGGAGCTAGACAAT +
Preference number: 5 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCAVFLL*GRELDN
Trigger: ATTGTCTAGCTCCCGCCCCAAAAGAAGAAAAACTGC...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATCTGCGGCAATTCACTaGTTTCAATTTCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSSAAIH*FQFPLN
Trigger: ATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCAGTCAAGTACAGCTTTaGTCTGCTGAGCATTTGGAT +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVSQVQL*SAEHLD
Trigger: ATCCAAATGCTCAGCAGACAAAAGCTGTACTTGACT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCATTAAAGAATTCTGGATaGGAGTACCTGTCAAAACCC +
Preference number: 5 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSLKNSG*EYLSKP
Trigger: GGGTTTTGACAGGTACTCCAATCCAGAATTCTTTAA...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCAGTATGGCAACAAATTaGCCGCAGTCTAAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVSMATN*PQSKQK
Trigger: CTTTTGCTTAGACTGCGGCAAATTTGTTGCCATACT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAAAGAATCCAGGCAAATaGCACATTCCTCATCTGAAC +
Preference number: 5 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVKNPGK*HIPHLN
Trigger: GTTCAGATGAGGAATGTGCAATTTGCCTGGATTCTT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCAACTCTTTTCTTTaGGGCCATGGAACCATCCAA +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVFNSFL*GHGTIQ
Trigger: TTGGATGGTTCCATGGCCCAAAAGAAAAGAGTTGAA...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTATTCAACTCTTTTCTTTaGGGCCATGGAACCATCCAA +
Preference number: 5 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVFNSFL*GHGTIQ
Trigger: TTGGATGGTTCCATGGCCCAAAAGAAAAGAGTTGAA...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCGTGCTAACCTGGACTTaGGTCTCATTTAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVVLTWT*VSFKIW
Trigger: CCAAATCTTAAATGAGACCAAAGTCCAGGTTAGCAC...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGTTGGGTAGGACTGGTTaGCCTCTCACTCCCACAGAC +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQLGRTG*PLTPTD
Trigger: GTCTGTGGGAGTGAGAGGCAAACCAGTCCTACCCAA...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCCCCTATAACACAACATaGTCTCCGATCTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVPYNTT*SPISSF
Trigger: GAAAGATGAGATCGGAGACAATGTTGTGTTATAGGG...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS TCA 90 bp AAACGTGGAAAGAAAGTTGGATATGAGAGGCGTGGAAAATTTCCATaGACTCCATACTGGACAGTCTGCAAGTACTTCCAAACTGGATCC +
Preference number: 5 (lower is better)
Translates to: KRGKKVGYERRGKFP*TPYWTVCKYFQTGS
Trigger: GGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTCCACGCCTCTCATATCCAACTTTCTTTCCACGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000481663.1
ENST00000494055.5
CDS GCA 90 bp ATGGCAACAAATTTGCCGCAGTCTAAGCAAAAGACCCAGGACATCTaGATAATGTGCCAGGACAGTCCCTTCATTAAAATACCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: MATNLPQSKQKTQDI*IMCQDSPFIKIPSN
Trigger: ATTGGAAGGTATTTTAATGAAGGGACTGTCCTGGCACATTATGCAGATGTCCTGGGTCTTTTGCTTAGACTGCGGCAAATTTGTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000467858.1
ENST00000494055.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCAAACTGGATCCCTCTaGAACATCCAGGACATGGCG +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQQTGSL*NIQDMA
Trigger: CGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTG...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTGGAGGGATAACATCTaGGAATTCAAAACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVWRDNI*EFKTWK
Trigger: TTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCA...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAAACTACCCCTTCAATTaGTGCCAATTTGTTGTCCAT +
Preference number: 5 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVNYPFN*CQFVVH
Trigger: ATGGACAACAAATTGGCACAAATTGAAGGGGTAGTT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCCATCTAGATGCGTCTTaGCTTAGTCCATCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCHLDAS*LSPSAF
Trigger: AAAGGCAGATGGACTAAGCAAAGACGCATCTAGATG...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAACTTACTCTTCTCCTaGATATCTGAAATACTGGGT +
Preference number: 5 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSNLLFS*ISEILG
Trigger: ACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTATCTGCGGCAATTCACTaGTTTCAATTTCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVSAAIH*FQFPLN
Trigger: ATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGA...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCAAACAATATCCTGTTTaGAAAGTAAGGCCGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVKQYPV*KVRPVL
Trigger: GAGAACCGGCCTTACTTTCAAAACAGGATATTGTTT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCCTCATTCTGAATGACTaGGCAAATACAGGGTTTACA +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVLILND*ANTGFT
Trigger: TGTAAACCCTGTATTTGCCAAGTCATTCAGAATGAG...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTTTCAACTCTTTTCTTTaGGGCCATGGAACCATCCAA +
Preference number: 5 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTFNSFL*GHGTIQ
Trigger: TTGGATGGTTCCATGGCCCAAAAGAAAAGAGTTGAA...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR CAA 90 bp AAACGACTTTGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCAAATCTCACTGAAGTATaGCTATATGGAGAACCCATA +
Preference number: 5 (lower is better)
Translates to: KRLWRSSSPTSIQISRLSNLTEV*LYGEPI
Trigger: TATGGGTTCTCCATATAGCAATACTTCAGTGAGATT...TGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCAAAGTCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS TCA 90 bp CACCAAAAGGAACTACCCCTTCAATTTGTGCCAATTTGTTGTCCATaGTATAGGCCAAAGCACCTGCAAGCTCTTTCTTTAAATGGCCAA +
Preference number: 5 (lower is better)
Translates to: HQKELPLQFVPICCP*YRPKHLQALSLNGQ
Trigger: TTGGCCATTTAAAGAAAGAGCTTGCAGGTGCTTTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCAACGTGGAAAGAAAGTaGGATATGAGAGGCGTGGAA +
Preference number: 5 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPNVERK*DMRGVE
Trigger: TTCCACGCCTCTCATATCCAACTTTCTTTCCACGTT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTAACTACCCCTTCAATTaGTGCCAATTTGTTGTCCAT +
Preference number: 5 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTNYPFN*CQFVVH
Trigger: ATGGACAACAAATTGGCACAAATTGAAGGGGTAGTT...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR CAA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCCTGCCATCATGGAAGTaGGTAAGGATTACTGCAATG +
Preference number: 5 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPLPSWK*VRITAM
Trigger: CATTGCAGTAATCCTTACCAACTTCCATGATGGCAG...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCAACTTACTCTTCTCCTaGATATCTGAAATACTGGGT +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVNLLFS*ISEILG
Trigger: ACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAAACTTACTCTTCTCCTaGATATCTGAAATACTGGGT +
Preference number: 5 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVNLLFS*ISEILG
Trigger: ACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp ATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTTCTGCGGCAATTCACTaGTTTCAATTTCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: IQPNFHPDITPLTYSSLTSAAIH*FQFPLN
Trigger: ATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGA...AGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR CAA 90 bp AGGGAGAAAAGGACTTATCTGGTGAGAGATTTGGCATATACCTTCAATGTGTGCTTCAACTCTTTTCTTTaGGGCCATGGAACCATCCAA +
Preference number: 5 (lower is better)
Translates to: REKRTYLVRDLAYTFNVCFNSFL*GHGTIQ
Trigger: TTGGATGGTTCCATGGCCCAAAAGAAAAGAGTTGAA...GCACACATTGAAGGTATATGCCAAATCTCTCACCAGATAAGTCCTTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS-3UTR CAA 90 bp AGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCAATATTCAAATCAAATaGGGTAGGACTGGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: RSSSPTSIQISRLSHIVVNIQIK*GRTGLP
Trigger: AGGCAAACCAGTCCTACCCAATTTGATTTGAATATT...GACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp TGGAGATCATCCAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAAATATTCAAATCAAATaGGGTAGGACTGGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: WRSSSPTSIQISRLSHIVNIQIK*GRTGLP
Trigger: AGGCAAACCAGTCCTACCCAATTTGATTTGAATATT...TACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTGGATGATCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTTATCTGGTGAGAGATTaGGCATATACCTTCAATGTG +
Preference number: 5 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTYLVRD*AYTFNV
Trigger: CACATTGAAGGTATATGCCAAATCTCTCACCAGATA...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR CAA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACCTGCCATCATGGAAGTaGGTAAGGATTACTGCAATG +
Preference number: 5 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNLPSWK*VRITAM
Trigger: CATTGCAGTAATCCTTACCAACTTCCATGATGGCAG...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp AGTCTGTATATATTGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCCATCTAGATGCGTCTTaGCTTAGTCCATCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: SLYILFTRTTNTASQIGGHLDAS*LSPSAF
Trigger: AAAGGCAGATGGACTAAGCAAAGACGCATCTAGATG...GCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACAATATATACAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp CAGCCCAACTTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTAACTTACTCTTCTCCTaGATATCTGAAATACTGGGT +
Preference number: 5 (lower is better)
Translates to: QPNFHPDITPLTYSSLLTNLLFS*ISEILG
Trigger: ACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTT...AGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAAGTTGGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR CAA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCAGTATGGCAACAAATTaGCCGCAGTCTAAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPSMATN*PQSKQK
Trigger: CTTTTGCTTAGACTGCGGCAAATTTGTTGCCATACT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCAAGAATCCAGGCAAATaGCACATTCCTCATCTGAAC +
Preference number: 5 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPKNPGK*HIPHLN
Trigger: GTTCAGATGAGGAATGTGCAATTTGCCTGGATTCTT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCCCCTATAACACAACATaGTCTCCGATCTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPPYNTT*SPISSF
Trigger: GAAAGATGAGATCGGAGACAATGTTGTGTTATAGGG...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS GCA 90 bp TATAGTATAAGTCATTTCGCTGTTCCCAGAATGGTGGAAGTTCTTTaGTATTTTCCCGTGACACCATCCAAGCTAGAGCTTGTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: YSISHFAVPRMVEVL*YFPVTPSKLELVFD
Trigger: ATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAACAGCGAAATGACTTATACTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS CCA 90 bp ACTTCTTCATCACTAGTTAGAAAGTCATCTGGAGGGATAACATCTTaGAATTCAAAACGTGGAAAGAAAGTTGGATATGAGAGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: TSSSLVRKSSGGITS*NSKRGKKVGYERRG
Trigger: TCCACGCCTCTCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000481663.1
ENST00000494055.5
CDS-3UTR CAA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCAACTACCCCTTCAATTaGTGCCAATTTGTTGTCCAT +
Preference number: 5 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPNYPFN*CQFVVH
Trigger: ATGGACAACAAATTGGCACAAATTGAAGGGGTAGTT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCTGCCATCATGGAAGTaGGTAAGGATTACTGCAATG +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQLPSWK*VRITAM
Trigger: CATTGCAGTAATCCTTACCAACTTCCATGATGGCAG...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCAAACAATATCCTGTTTaGAAAGTAAGGCCGGTTCTC +
Preference number: 5 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPKQYPV*KVRPVL
Trigger: GAGAACCGGCCTTACTTTCAAAACAGGATATTGTTT...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCTTAAAGAATTCTGGATaGGAGTACCTGTCAAAACCC +
Preference number: 5 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPLKNSG*EYLSKP
Trigger: GGGTTTTGACAGGTACTCCAATCCAGAATTCTTTAA...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACAAGAATCCAGGCAAATaGCACATTCCTCATCTGAAC +
Preference number: 5 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNKNPGK*HIPHLN
Trigger: GTTCAGATGAGGAATGTGCAATTTGCCTGGATTCTT...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp TTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGCCCTGTGATGATAACTTCTaGCTTCTGACCAAGTCTATG +
Preference number: 5 (lower is better)
Translates to: FRIKMSLRVETTLEIIQPCDDNF*LLTKSM
Trigger: CATAGACTTGGTCAGAAGCAAGAAGTTATCATCACA...GGGCTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAAAACTACCCCTTCAATTaGTGCCAATTTGTTGTCCAT +
Preference number: 5 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQNYPFN*CQFVVH
Trigger: ATGGACAACAAATTGGCACAAATTGAAGGGGTAGTT...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGAGTCAAGTACAGCTTTaGTCTGCTGAGCATTTGGAT +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQSQVQL*SAEHLD
Trigger: ATCCAAATGCTCAGCAGACAAAAGCTGTACTTGACT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGAGTATGGCAACAAATTaGCCGCAGTCTAAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQSMATN*PQSKQK
Trigger: CTTTTGCTTAGACTGCGGCAAATTTGTTGCCATACT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACCTCATTCTGAATGACTaGGCAAATACAGGGTTTACA +
Preference number: 5 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNLILND*ANTGFT
Trigger: TGTAAACCCTGTATTTGCCAAGTCATTCAGAATGAG...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp TTCCATCCAGATATCACGCCTCTCACATATAGTAGTCTTACTAAAATCCCACAACTCATTCTGAATGACTaGGCAAATACAGGGTTTACA +
Preference number: 5 (lower is better)
Translates to: FHPDITPLTYSSLTKIPQLILND*ANTGFT
Trigger: TGTAAACCCTGTATTTGCCAAGTCATTCAGAATGAG...TTGTGGGATTTTAGTAAGACTACTATATGTGAGAGGCGTGATATCTGGATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494055.5
CDS-3UTR CAA 90 bp CATCCAGATATCACGCCTCTCACATATAGTAGTCTTCTTACTAAAATCCCACAATGTGATGATAACTTCTaGCTTCTGACCAAGTCTATG +
Preference number: 5 (lower is better)
Translates to: HPDITPLTYSSLLTKIPQCDDNF*LLTKSM
Trigger: CATAGACTTGGTCAGAAGCAAGAAGTTATCATCACA...TTGTGGGATTTTAGTAAGAAGACTACTATATGTGAGAGGCGTGATATCTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392912.6
CDS-3UTR CAA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACTGTGATGATAACTTCTaGCTTCTGACCAAGTCTATG +
Preference number: 5 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNCDDNF*LLTKSM
Trigger: CATAGACTTGGTCAGAAGCAAGAAGTTATCATCACA...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp TGTTTACAAGGACTACAAACACTGCATCACAAATCGGAGGCTTTGGTAAATAACTATCTGGTGAGAGATTaGGCATATACCTTCAATGTG +
Preference number: 5 (lower is better)
Translates to: CLQGLQTLHHKSEALVNNYLVRD*AYTFNV
Trigger: CACATTGAAGGTATATGCCAAATCTCTCACCAGATA...GTTATTTACCAAAGCCTCCGATTTGTGATGCAGTGTTTGTAGTCCTTGTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGTGGAGGGATAACATCTaGGAATTCAAAACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQWRDNI*EFKTWK
Trigger: TTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCA...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGTCTGCGGCAATTCACTaGTTTCAATTTCCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQSAAIH*FQFPLN
Trigger: ATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGA...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGAAACAATATCCTGTTTaGAAAGTAAGGCCGGTTCTC +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQKQYPV*KVRPVL
Trigger: GAGAACCGGCCTTACTTTCAAAACAGGATATTGTTT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGTGTGATGATAACTTCTaGCTTCTGACCAAGTCTATG +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQCDDNF*LLTKSM
Trigger: CATAGACTTGGTCAGAAGCAAGAAGTTATCATCACA...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGTATCTGGTGAGAGATTaGGCATATACCTTCAATGTG +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQYLVRD*AYTFNV
Trigger: CACATTGAAGGTATATGCCAAATCTCTCACCAGATA...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
CDS TCA 90 bp TTTGCCTTTCATTTTCTGCGGCAATTCACTTGTTTCAATTTCCTCTaGATCACTGCTTTCTATGTACTGGACAGCAGTTTTTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: FAFHFLRQFTCFNFL*ITAFYVLDSSFSSF
Trigger: AAAAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS-3UTR CAA 90 bp ACATTCAGGATTAAGATGTCTTTAAGAGTTGAAACGACTTTGGAGATCATCCAGAATCTCACTGAAGTATaGCTATATGGAGAACCCATA +
Preference number: 5 (lower is better)
Translates to: TFRIKMSLRVETTLEIIQNLTEV*LYGEPI
Trigger: TATGGGTTCTCCATATAGCAATACTTCAGTGAGATT...CTGGATGATCTCCAAAGTCGTTTCAACTCTTAAAGACATCTTAATCCTGAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310053.10
ENST00000465259.5
CDS CCA 72 bp CTGAGTGGGATGACAAGAGGAGCGCCTCGGCTCCCCTaGATCGTTTTCGAGCCGCCTCGATACGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LSGMTRGAPRLP*IVFEPPRYASF
Trigger: GAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCATCCCACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000481663.1
ENST00000494055.5
CDS TCA 72 bp GGACAAATTCCGAGCGCCGGATCAGGAGCGCACGACTaGAAGGTAAGTCGCCGCGAGTCCAGTCAGACGTCG +
Preference number: 6 (lower is better)
Translates to: GQIPSAGSGAHD*KVSRRESSQTS
Trigger: CGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310053.10
ENST00000465259.5
ENST00000494055.5
CDS TCA 72 bp CCCAGCACTTGGAGAGGCCAAGGCGGACGGATCACTTaGGCCCAGGAGTTCCAGATCAGCCTGGACAACATG +
Preference number: 6 (lower is better)
Translates to: PSTWRGQGGRIT*AQEFQISLDNM
Trigger: CATGTTGTCCAGGCTGATCTGGAACTCCTGGGCTCAAGTGATCCGTCCGCCTTGGCCTCTCCAAGTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481663.1
CDS CCA 72 bp GACGGATCACTTGAGCCCAGGAGTTCCAGATCAGCCTaGACAACATGCCAAAACTACTCCCGTGTAATAGCG +
Preference number: 6 (lower is better)
Translates to: DGSLEPRSSRSA*TTCQNYSRVIA
Trigger: CGCTATTACACGGGAGTAGTTTTGGCATGTTGTCCAGGCTGATCTGGAACTCCTGGGCTCAAGTGATCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481663.1
CDS CCA 72 bp AAGCTGTTCAGTTGTCATCTGTACTGCAGCATGCACTaGCATACTATAGCTTGGTCCAGCTCTTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: KLFSCHLYCSMH*HTIAWSSSSRA
Trigger: GGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGACAACTGAACAGCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS TCA 72 bp GGTCAATCCAGTTGCTTAACACAGAAAGCGGACAGATaGTCAGTGTTGTTCTTGGTCTCTCCTCAACATCAG +
Preference number: 6 (lower is better)
Translates to: GQSSCLTQKADR*SVLFLVSPQHQ
Trigger: CTGATGTTGAGGAGAGACCAAGAACAACACTGATCATCTGTCCGCTTTCTGTGTTAAGCAACTGGATTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS GCA 72 bp AGTCATTTCGCTGTTCCCAGAATGGTGGAAGTTCTTTaGTATTTTCCCGTGACACCATCCAAGCTAGAGCTT +
Preference number: 6 (lower is better)
Translates to: SHFAVPRMVEVL*YFPVTPSKLEL
Trigger: AAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAACAGCGAAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS CAA 72 bp AAGTCATTTCGCTGTTCCCAGAATGGTGGAAGTTCTTaGCTATTTTCCCGTGACACCATCCAAGCTAGAGCT +
Preference number: 6 (lower is better)
Translates to: KSFRCSQNGGSS*LFSRDTIQARA
Trigger: AGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAACAGCGAAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS CAA 90 bp GGGCGGGAGCTAGACAATTCTGACATGCGAAACTTACTCTTCTCCTaGATATCTGAAATACTGGGTTGTTCACTACATCTAGATGCGTCT +
Preference number: 6 (lower is better)
Translates to: GRELDNSDMRNLLFS*ISEILGCSLHLDAS
Trigger: AGACGCATCTAGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS GCA 72 bp AAGAGGTCTGCCATCATGGAAGTTGGTAAGGATTACTaGAATGGCCGTAAGAGTTTTACCCAAACCCATATC +
Preference number: 6 (lower is better)
Translates to: KRSAIMEVGKDY*NGRKSFTQTHI
Trigger: GATATGGGTTTGGGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS TCA 72 bp AAGAAATCCAGTTGCTTAACACAGAAAGCGGACAGATaGTCAGTGTTGTTCTTGGTCTCTCCTCAACATCAG +
Preference number: 6 (lower is better)
Translates to: KKSSCLTQKADR*SVLFLVSPQHQ
Trigger: CTGATGTTGAGGAGAGACCAAGAACAACACTGATCATCTGTCCGCTTTCTGTGTTAAGCAACTGGATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493881.1
CDS GCA 72 bp AATTTGCCGCAGTCTAAGCAAAAGACCCAGGACATCTaGATAATGTGCCAGGACAGTCCCTTCATTAAAATA +
Preference number: 6 (lower is better)
Translates to: NLPQSKQKTQDI*IMCQDSPFIKI
Trigger: TATTTTAATGAAGGGACTGTCCTGGCACATTATGCAGATGTCCTGGGTCTTTTGCTTAGACTGCGGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000467858.1
ENST00000494055.5
CDS TCA 72 bp AAGAAAGTTGGATATGAGAGGCGTGGAAAATTTCCATaGACTCCATACTGGACAGTCTGCAAGTACTTCCAA +
Preference number: 6 (lower is better)
Translates to: KKVGYERRGKFP*TPYWTVCKYFQ
Trigger: TTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTCCACGCCTCTCATATCCAACTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000481663.1
ENST00000494055.5
CDS TCA 72 bp GAACTACCCCTTCAATTTGTGCCAATTTGTTGTCCATaGTATAGGCCAAAGCACCTGCAAGCTCTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: ELPLQFVPICCP*YRPKHLQALSL
Trigger: TAAAGAAAGAGCTTGCAGGTGCTTTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS CAA 72 bp ACTCTTTCAATAGGAAGAGGTCTGCCATCATGGAAGTaGGTAAGGATTACTGCAATGGCCGTAAGAGTTTTA +
Preference number: 6 (lower is better)
Translates to: TLSIGRGLPSWK*VRITAMAVRVL
Trigger: TAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS CAA 90 bp TTCTTTTTAACTCTTTCAATAGGAAGAGGTCTGCCATCATGGAAGTaGGTAAGGATTACTGCAATGGCCGTAAGAGTTTTACCCAAACCC +
Preference number: 6 (lower is better)
Translates to: FFLTLSIGRGLPSWK*VRITAMAVRVLPKP
Trigger: GGGTTTGGGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS CAA 90 bp GTGCACAATGTGTTATCACAGGAACTGTTAAAGAATCCAGGCAAATaGCACATTCCTCATCTGAACCTGAGCTCAGAATTAACTTCATCT +
Preference number: 6 (lower is better)
Translates to: VHNVLSQELLKNPGK*HIPHLNLSSELTSS
Trigger: AGATGAAGTTAATTCTGAGCTCAGGTTCAGATGAGGAATGTGCAATTTGCCTGGATTCTTTAACAGTTCCTGTGATAACACATTGTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000467858.1
ENST00000494055.5
ENST00000497427.1
CDS CCA 72 bp TTTTTAACTCTTTCAATAGGAAGAGGTCTGCCATCATaGAAGTTGGTAAGGATTACTGCAATGGCCGTAAGA +
Preference number: 6 (lower is better)
Translates to: FLTLSIGRGLPS*KLVRITAMAVR
Trigger: TCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS CAA 90 bp CATCTAGATGCGTCTTTGCTTAGTCCATCTGCCTTTTCACTGGTATaGTTTCCTCCAAGTTTCATAGAGTCATCGTTAACATTATATTCC +
Preference number: 6 (lower is better)
Translates to: HLDASLLSPSAFSLV*FPPSFIESSLTLYS
Trigger: GGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAGACGCATCTAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS GCA 72 bp GCGGCAATTCACTTGTTTCAATTTCCTCTGAATCACTaGTTTCTATGTACTGGACAGCAGTTTTTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: AAIHLFQFPLNH*FLCTGQQFFFF
Trigger: AAAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS CAA 90 bp ACTGTACATTTTTCAGTTTGCCTTTCATTTTCTGCGGCAATTCACTaGTTTCAATTTCCTCTGAATCACTGCTTTCTATGTACTGGACAG +
Preference number: 6 (lower is better)
Translates to: TVHFSVCLSFSAAIH*FQFPLNHCFLCTGQ
Trigger: CTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAACTGAAAAATGTACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5
CDS GCA 72 bp TCATCTCCCATTGTGACAGGACGCTGTATTGTTCTATaGCACCATTCTCTATCAATAAATGGTTTAAGTTTT +
Preference number: 6 (lower is better)
Translates to: SSPIVTGRCIVL*HHSLSINGLSF
Trigger: AAAACTTAAACCATTTATTGATAGAGAATGGTGGCATAGAACAATACAGCGTCCTGTCACAATGGGAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000467858.1
ENST00000494055.5
CDS CAA 72 bp CTAGACAATTCTGACATGCGAAACTTACTCTTCTCCTaGATATCTGAAATACTGGGTTGTTCACTACATCTA +
Preference number: 6 (lower is better)
Translates to: LDNSDMRNLLFS*ISEILGCSLHL
Trigger: TAGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310053.10
ENST00000392912.6
ENST00000465259.5
ENST00000494055.5