RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HLF (Homo sapiens)

Ensembl gene IDs: ENSG00000108924

Ensembl transcript IDs: ENST00000226067.10, ENST00000430986.6, ENST00000570962.1, ENST00000572002.1, ENST00000572234.2, ENST00000573020.1, ENST00000573422.5, ENST00000573945.5, ENST00000575307.1, ENST00000575345.5, ENST00000575868.3

Found 591 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATaGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACC +
Preference number: 1 (lower is better)
Translates to: GDGRPARGLLSLVKT*HLSLLELKDDERAT
Trigger: GGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR CCA 90 bp CTCCATGAAGCAGATCTGCCTTGTTTGCTAGTTAACTGCCCTGGATaGAGAGGCAGCCAGTCCAGAGGGAGTGTTCGTGTGTGTGTATCG +
Preference number: 1 (lower is better)
Translates to: LHEADLPCLLVNCPG*RGSQSRGSVRVCVS
Trigger: CGATACACACACACGAACACTCCCTCTGGACTGGCTGCCTCTCCATCCAGGGCAGTTAACTAGCAAACAAGGCAGATCTGCTTCATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CCA 90 bp CCTCTGGGTGGTCTAGTACAGGTTTCCATTCCACCCACCCCACTGTaGAATCCCATCTGTACTCTCCTCAAAGGGTCCTTCTGCTTTGAG +
Preference number: 1 (lower is better)
Translates to: PLGGLVQVSIPPTPL*NPICTLLKGSFCFE
Trigger: CTCAAAGCAGAAGGACCCTTTGAGGAGAGTACAGATGGGATTCCACAGTGGGGTGGGTGGAATGGAAACCTGTACTAGACCACCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CCA 90 bp CTGCAAAAATGCCATCCTACAGGGGCCCGTGCCTGGCCTCATACTTaGCAAGTATGTTCTTGCATTTGCCCAGCTCCTTCCTCAAGTCAG +
Preference number: 1 (lower is better)
Translates to: LQKCHPTGARAWPHT*QVCSCICPAPSSSQ
Trigger: CTGACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTATGAGGCCAGGCACGGGCCCCTGTAGGATGGCATTTTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR GCA 90 bp ACCCCACTGTGGAATCCCATCTGTACTCTCCTCAAAGGGTCCTTCTaGTTTGAGGGATGGGTCAGTGGAGGCCTGTTGTATTTGAAGACA +
Preference number: 1 (lower is better)
Translates to: TPLWNPICTLLKGSF*FEGWVSGGLLYLKT
Trigger: TGTCTTCAAATACAACAGGCCTCCACTGACCCATCCCTCAAAGCAGAAGGACCCTTTGAGGAGAGTACAGATGGGATTCCACAGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR TCA 90 bp ACTGTGGAATCCCATCTGTACTCTCCTCAAAGGGTCCTTCTGCTTTaGGGGATGGGTCAGTGGAGGCCTGTTGTATTTGAAGACAAAAGG +
Preference number: 1 (lower is better)
Translates to: TVESHLYSPQRVLLL*GMGQWRPVVFEDKR
Trigger: CCTTTTGTCTTCAAATACAACAGGCCTCCACTGACCCATCCCTCAAAGCAGAAGGACCCTTTGAGGAGAGTACAGATGGGATTCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CCA 90 bp AATCCCATCTGTACTCTCCTCAAAGGGTCCTTCTGCTTTGAGGGATaGGTCAGTGGAGGCCTGTTGTATTTGAAGACAAAAGGCCTATCA +
Preference number: 1 (lower is better)
Translates to: NPICTLLKGSFCFEG*VSGGLLYLKTKGLS
Trigger: TGATAGGCCTTTTGTCTTCAAATACAACAGGCCTCCACTGACCCATCCCTCAAAGCAGAAGGACCCTTTGAGGAGAGTACAGATGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATaGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACA +
Preference number: 1 (lower is better)
Translates to: LSLLELKDDERATLK*QEQRNTHTHIPLTT
Trigger: TGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR TCA 90 bp ACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGACAGGAA +
Preference number: 1 (lower is better)
Translates to: TPKWESVVFMPLVKC*CQKGWFACGAIRQE
Trigger: TTCCTGTCTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR GCA 90 bp AAGACTTTATGTCGACTTATTCACACACATACACACACACACACATaGACGCACACACACACACACACACTCTTACACTTAGCCTCCTGC +
Preference number: 1 (lower is better)
Translates to: KTLCRLIHTHTHTHT*THTHTHTLLHLASC
Trigger: GCAGGAGGCTAAGTGTAAGAGTGTGTGTGTGTGTGTGTGCGTGCATGTGTGTGTGTGTGTATGTGTGTGAATAAGTCGACATAAAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CCA 90 bp TATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAACAAACTGTCCATCTATTCCAAAGCC +
Preference number: 1 (lower is better)
Translates to: YASGKVLMSERLVCV*CYQTGNKLSIYSKA
Trigger: GGCTTTGGAATAGATGGACAGTTTGTTTCCTGTCTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR TCA 90 bp TCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATaGGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACACGCACAC +
Preference number: 1 (lower is better)
Translates to: SSKDMAPFFVGTKRR*EGYLKMARAKEHAH
Trigger: GTGTGCGTGTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR TCA 90 bp GTCTTGCCTAATGTGGTATTTGAATGGTTCAAAGTGGCCACTTCCTaGAGAGAAAGAAGTAATGATCTACAGCCCTCCCCTCAACAAACT +
Preference number: 1 (lower is better)
Translates to: VLPNVVFEWFKVATS*RERSNDLQPSPQQT
Trigger: AGTTTGTTGAGGGGAGGGCTGTAGATCATTACTTCTTTCTCTTCAGGAAGTGGCCACTTTGAACCATTCAAATACCACATTAGGCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR TCA 90 bp GCCACTGATAATTCTTGCTTCTTCCGAAAACAGACCCTAGACATCTaGTTGTACATTTGGAATTACTGTGAGTTCCCCACCAAACCAGTG +
Preference number: 1 (lower is better)
Translates to: ATDNSCFFRKQTLDI*LYIWNYCEFPTKPV
Trigger: CACTGGTTTGGTGGGGAACTCACAGTAATTCCAAATGTACAATCAGATGTCTAGGGTCTGTTTTCGGAAGAAGCAAGAATTATCAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR TCA 90 bp CAATACACCCCCATCTCTTGCTGTTATCTACAGCTTGTGACAAAATaGACACCTTGTAGAAATATCCTACTGGTTGGGTTTCCCAAGTCT +
Preference number: 1 (lower is better)
Translates to: QYTPISCCYLQLVTK*TPCRNILLVGFPKS
Trigger: AGACTTGGGAAACCCAACCAGTAGGATATTTCTACAAGGTGTTCATTTTGTCACAAGCTGTAGATAACAGCAAGAGATGGGGGTGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
3UTR GCA 90 bp ACCTCCTTAAGGCAGCACCAGCAGAAAGATAGGCTGGTCAATTTTTaGCTTTCTTTGCCAAGTCTAGTTAAAAGAAACAACAATGTGACC +
Preference number: 1 (lower is better)
Translates to: TSLRQHQQKDRLVNF*LSLPSLVKRNNNVT
Trigger: GGTCACATTGTTGTTTCTTTTAACTAGACTTGGCAAAGAAAGGCAAAAATTGACCAGCCTATCTTTCTGCTGGTGCTGCCTTAAGGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR TCA 90 bp TGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTACAGCTTGTaGCAAAATGAACACCTTGTAGAAATATCCTACTGGTTGGGTTTC +
Preference number: 1 (lower is better)
Translates to: CNSNTPPSLAVIYSL*QNEHLVEISYWLGF
Trigger: GAAACCCAACCAGTAGGATATTTCTACAAGGTGTTCATTTTGTCACAAGCTGTAGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
3UTR CCA 90 bp CTGTTGTATTTGAAGACAAAAGGCCTATCACAGTCTTGCCTAATGTaGTATTTGAATGGTTCAAAGTGGCCACTTCCTGAAGAGAAAGAA +
Preference number: 1 (lower is better)
Translates to: LLYLKTKGLSQSCLM*YLNGSKWPLPEEKE
Trigger: TTCTTTCTCTTCAGGAAGTGGCCACTTTGAACCATTCAAATACCACATTAGGCAAGACTGTGATAGGCCTTTTGTCTTCAAATACAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 90 bp GAGTCAAGCCATGGCCTCCCGCTCCATGAAGCAGATCTGCCTTGTTaGCTAGTTAACTGCCCTGGATGGAGAGGCAGCCAGTCCAGAGGG +
Preference number: 2 (lower is better)
Translates to: ESSHGLPLHEADLPC*LVNCPGWRGSQSRG
Trigger: CCCTCTGGACTGGCTGCCTCTCCATCCAGGGCAGTTAACTAGCAAACAAGGCAGATCTGCTTCATGGAGCGGGAGGCCATGGCTTGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 90 bp CACCTGCAGGGTGCTGAGACCCCAGTGCTAAATCCAGATCTCCAATaGCCATCACACATAGGCAAGCAGGCCTGGTCCCATGCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: HLQGAETPVLNPDLQ*PSHIGKQAWSHALG
Trigger: TCCCAAGGCATGGGACCAGGCCTGCTTGCCTATGTGTGATGGCAATTGGAGATCTGGATTTAGCACTGGGGTCTCAGCACCCTGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR GCA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCCCTCCCATTTCCCTCTaGTTCCTTGTCCTAGGGAAT +
Preference number: 2 (lower is better)
Translates to: GPQGRKELSGALAATCHSPPISL*FLVLGN
Trigger: ATTCCCTAGGACAAGGAAGCAGAGGGAAATGGGAGG...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCAAGGGCTACCTTAAAATaGCAAGAGCAAAGGAACACG +
Preference number: 2 (lower is better)
Translates to: GRGWETRERAPQSSKDMARATLK*QEQRNT
Trigger: CGTGTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCT...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR CAA 90 bp CCTGCAAAAATGCCATCCTACAGGGGCCCGTGCCTGGCCTCATACTaGGCAAGTATGTTCTTGCATTTGCCCAGCTCCTTCCTCAAGTCA +
Preference number: 2 (lower is better)
Translates to: PAKMPSYRGPCLASY*ASMFLHLPSSFLKS
Trigger: TGACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTATGAGGCCAGGCACGGGCCCCTGTAGGATGGCATTTTTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR TCA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCGGAACTAAAAGACGATaGGAGGGCTACCTTAAAATG +
Preference number: 2 (lower is better)
Translates to: GPQGRKELSGALAATCHSGTKRR*EGYLKM
Trigger: CATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCC...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCTTGGTTTGCGTGTGGTaGTATCAGACAGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: GPQGRKELSGALAATCHSLVCVW*YQTGNK
Trigger: TTTGTTTCCTGTCTGATAGCACCACACGCAAACCAA...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAGGGTCAAACATTTCCTaGCCAGGGATGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTGSNIS*PGMLER
Trigger: CCTTTCCAGCATCCCTGGCCAGGAAATGTTTGACCC...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR CCA 90 bp TGTTGTTCTTTCTGCGCCTTGCCCAGTACTTGTCATCCTTCAGGTCATCAGGGATGGCTCATAACCCACTaGGACCTGGATGGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: CCSFCALPSTCHPSGHQGWLITH*DLDGVR
Trigger: CCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCA...TCCCTGATGACCTGAAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR TCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACACTTCCTCAGAGAACTTaGGTTTGCGAGGGTCAAACA +
Preference number: 2 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTLPQRT*VCEGQT
Trigger: TGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAG...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR CCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAAC +
Preference number: 2 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTRLVCV*CYQTGN
Trigger: GTTTCCTGTCTGATAGCACCACACGCAAACCAACCT...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGCGTCGCGGGAGCGCTTaGCTGCCATGTTGTTCTTTC +
Preference number: 2 (lower is better)
Translates to: CVYASGKVLMSERLVCVWRRGSA*LPCCSF
Trigger: GAAAGAACAACATGGCAGCCAAGCGCTCCCGCGACG...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR TCA 90 bp GTTGTTCTTTCTGCGCCTTGCCCAGTACTTGTCATCCTTCAGGTCATCAGGGATCTTTGCGAGCTTTCTTaGTCATGGGCTGTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: VVLSAPCPVLVILQVIRDLCELS*SWAVAS
Trigger: TGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAG...ATCCCTGATGACCTGAAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR GCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACTTGGTTTGCGTGTGGTaGTATCAGACAGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHLVCVW*YQTGNK
Trigger: TTTGTTTCCTGTCTGATAGCACCACACGCAAACCAA...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp GAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGGAACTCAGAATTTCGATCAGAAAGGTTGGTTTaGGTGTGGTGCTATCAGACA +
Preference number: 2 (lower is better)
Translates to: ELSGALAATCHSRNSEFRSERLV*VWCYQT
Trigger: TGTCTGATAGCACCACACGCAAACCAACCTTTCTGA...TCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCGGAACGAGGCCCGGATaGCGATCTGGTTCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCGTRPG*RSGSLS
Trigger: TGAAAGAGAACCAGATCGCCATCCGGGCCTCGTTCC...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR CAA 90 bp CTTGCCCAGTACTTGTCATCCTTCAGGTCATCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATGGGCTGTGGCTTCAGTTCTTCCTCA +
Preference number: 2 (lower is better)
Translates to: LAQYLSSFRSSGMKT*RAFLIMGCGFSSSS
Trigger: TGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAAGGATGACAAGTACTGGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR GCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR CAA 90 bp CCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTaGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAA +
Preference number: 2 (lower is better)
Translates to: PARGLLSLVKTWHLS*LELKDDERATLKWQ
Trigger: TTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR CAA 90 bp GGGTCCTTCTGCTTTGAGGGATGGGTCAGTGGAGGCCTGTTGTATTaGAAGACAAAAGGCCTATCACAGTCTTGCCTAATGTGGTATTTG +
Preference number: 2 (lower is better)
Translates to: GSFCFEGWVSGGLLY*KTKGLSQSCLMWYL
Trigger: CAAATACCACATTAGGCAAGACTGTGATAGGCCTTTTGTCTTCAAATACAACAGGCCTCCACTGACCCATCCCTCAAAGCAGAAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 90 bp TTGTCATCCTTCAGGTCATCAGGGATGAAGACTTTGCGAGCTTTCTaGATCATGGGCTGTGGCTTCAGTTCTTCCTCAGAGAACTTGCGT +
Preference number: 2 (lower is better)
Translates to: LSSFRSSGMKTLRAF*IMGCGFSSSSENLR
Trigger: ACGCAAGTTCTCTGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAAGGATGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR CCA 90 bp GTCATCCTTCAGGTCATCAGGGATGAAGACTTTGCGAGCTTTCTTGATCATGGGAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAAC +
Preference number: 2 (lower is better)
Translates to: VILQVIRDEDFASFLDHGRLVCV*CYQTGN
Trigger: GTTTCCTGTCTGATAGCACCACACGCAAACCAACCT...CCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAAGGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR CCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAGGGCTACCTTAAAATaGCAAGAGCAAAGGAACACG +
Preference number: 2 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTRATLK*QEQRNT
Trigger: CGTGTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCT...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR CAA 90 bp GCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: ARGLLSLVKTWHLSL*ELKDDERATLKWQE
Trigger: CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR TCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCTCAGGTCATCAGGGATaGAGACTTTGCGAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCSGHQG*RLCELS
Trigger: AGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGA...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR GCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTTTGGTTTGCGTGTGGTaGTATCAGACAGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTLVCVW*YQTGNK
Trigger: TTTGTTTCCTGTCTGATAGCACCACACGCAAACCAA...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: LRSTILPGPFLVNPSRESAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: CVYASGKVLMSERLVCVWAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCTGGCAAGTATGTTCTTaGATTTGCCCAGCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCWQVCS*ICPAPS
Trigger: GGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCA...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR CCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAAC +
Preference number: 2 (lower is better)
Translates to: LRSTILPGPFLVNPSRESRLVCV*CYQTGN
Trigger: GTTTCCTGTCTGATAGCACCACACGCAAACCAACCT...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 2 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMRCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR TCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: LRSTILPGPFLVNPSRESPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR TCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: CVYASGKVLMSERLVCVWPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 2 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTRCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATTGTTATGTTTGGTAAGGCCTTGGCCTTGCCAGTaGGGGTACCTAGGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: RSLWCCQKDNGLLLCLVRPWPCQ*GYLGAE
Trigger: TTCTGCTCCTAGGTACCCCCACTGGCAAGGCCAAGG...CCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR TCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCGGAACTAAAAGACGATaGGAGGGCTACCTTAAAATG +
Preference number: 2 (lower is better)
Translates to: LRSTILPGPFLVNPSRESGTKRR*EGYLKM
Trigger: CATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCC...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR TCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGGGAACTAAAAGACGATaGGAGGGCTACCTTAAAATG +
Preference number: 2 (lower is better)
Translates to: CVYASGKVLMSERLVCVWGTKRR*EGYLKM
Trigger: CATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCC...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTTGGTTTGCGTGTGGTaGTATCAGACAGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: CVYASGKVLMSERLVCVWLVCVW*YQTGNK
Trigger: TTTGTTTCCTGTCTGATAGCACCACACGCAAACCAA...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAAC +
Preference number: 2 (lower is better)
Translates to: LELKDDERATLKWQEQRNRLVCV*CYQTGN
Trigger: GTTTCCTGTCTGATAGCACCACACGCAAACCAACCT...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: LSLLELKDDERATLKWQEAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACCAGAGAACTTGCGTTTaGGAGGGTCAAACATTTCCT +
Preference number: 2 (lower is better)
Translates to: LELKDDERATLKWQEQRNQRTCV*EGQTFP
Trigger: AGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTG...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR TCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR TCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: LSLLELKDDERATLKWQEPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAAC +
Preference number: 2 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFRLVCV*CYQTGN
Trigger: GTTTCCTGTCTGATAGCACCACACGCAAACCAACCT...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATAGGGCTACCTTAAAATaGCAAGAGCAAAGGAACACG +
Preference number: 2 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDRATLK*QEQRNT
Trigger: CGTGTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCT...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR CAA 90 bp CACACACACACACACACTCTTACACTTAGCCTCCTGCAAAATGTATaGACTTTAGTTGCTATATCCGATTCGGATAAGGCTTTGCTCATT +
Preference number: 2 (lower is better)
Translates to: HTHTHTLTLSLLQNV*TLVAISDSDKALLI
Trigger: AATGAGCAAAGCCTTATCCGAATCGGATATAGCAACTAAAGTCAATACATTTTGCAGGAGGCTAAGTGTAAGAGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR GCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCAGGAATAGTCTGGCCATaGTCAAATGCATTACTTTAC +
Preference number: 2 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSGIVWP*SNALLY
Trigger: GTAAAGTAATGCATTTGAGCATGGCCAGACTATTCC...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR GCA 90 bp AAGGTGCTCAAAATTAAAGACTTTATGTCGACTTATTCACACACATACACACACCTCAAAGGGTCCTTCTaGTTTGAGGGATGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: KVLKIKDFMSTYSHTYTHLKGSF*FEGWVS
Trigger: ACTGACCCATCCCTCAAAGCAGAAGGACCCTTTGAG...GTGTGTGTATGTGTGTGAATAAGTCGACATAAAGTCTTTAATTTTGAGCACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR CCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 2 (lower is better)
Translates to: LELKDDERATLKWQEQRNRCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp TGTACATTTGGAATTACTGTGAGTTCCCCACCAAACCAGTGGGTTAGAAGGAACCAGTCTTGCCTAATGTaGTATTTGAATGGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: CTFGITVSSPPNQWVRRNQSCLM*YLNGSK
Trigger: CTTTGAACCATTCAAATACCACATTAGGCAAGACTG...GTTCCTTCTAACCCACTGGTTTGGTGGGGAACTCACAGTAATTCCAAATGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 90 bp TTAACTGACTTCTTTCTGAGGCCTAATAAGAAACAAGAAAGCTCCTaGTGTATTTTAGAGCAGGATTCGTCATCACAAGCCTCGATACTG +
Preference number: 2 (lower is better)
Translates to: LTDFFLRPNKKQESS*CILEQDSSSQASIL
Trigger: CAGTATCGAGGCTTGTGATGACGAATCCTGCTCTAAAATACACAAGGAGCTTTCTTGTTTCTTATTAGGCCTCAGAAAGAAGTCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 2 (lower is better)
Translates to: LSLLELKDDERATLKWQERCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CCA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTGTAGAAATATCCTACTaGTTGGGTTTCCCAAGTCTA +
Preference number: 2 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSVEISY*LGFPSL
Trigger: TAGACTTGGGAAACCCAACCAGTAGGATATTTCTAC...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
3UTR CAA 90 bp GTTTTTAATGACTATTGCCATCTAACAATTCTACAATTCGCCTCTTaGCCTGTAAAAAGGCCAACTCTACGTCCACCTGTGTCTCATATT +
Preference number: 2 (lower is better)
Translates to: VFNDYCHLTILQFAS*PVKRPTLRPPVSHI
Trigger: AATATGAGACACAGGTGGACGTAGAGTTGGCCTTTTTACAGGCAAAGAGGCGAATTGTAGAATTGTTAGATGGCAATAGTCATTAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
3UTR-3UTR GCA 90 bp AAGGTGCTCAAAATTAAAGACTTTATGTCGACTTATTCACACACATACACACACCTGGCCATGCTCAAATaGATTACTTTACTTTTTGTT +
Preference number: 2 (lower is better)
Translates to: KVLKIKDFMSTYSHTYTHLAMLK*ITLLFV
Trigger: AACAAAAAGTAAAGTAATGCATTTGAGCATGGCCAG...GTGTGTGTATGTGTGTGAATAAGTCGACATAAAGTCTTTAATTTTGAGCACCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR GCA 72 bp CTCTTTCAGCCTCCGGGCGTCGCGGGAGCGCTTGGCTaGCATGTTGTTCTTTCTGCGCCTTGCCCAGTACTT +
Preference number: 3 (lower is better)
Translates to: LFQPPGVAGALG*HVVLSAPCPVL
Trigger: AAGTACTGGGCAAGGCGCAGAAAGAACAACATGGCAGCCAAGCGCTCCCGCGACGCCCGGAGGCTGAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR TCA 72 bp ATAGCTGCAGCGTGCAGACATGCGTCTGACTCCGGTTaGCCCAAATCACTCAGAGTCAAGCCATGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: IAAACRHASDSG*PKSLRVKPWPP
Trigger: GGGAGGCCATGGCTTGACTCTGAGTGATTTGGGTCAACCGGAGTCAGACGCATGTCTGCACGCTGCAGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CCA 72 bp CGGGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTaGCAGCAACGTGCCATTCCAGGAACTCAGAATTTC +
Preference number: 3 (lower is better)
Translates to: RARRVEKNCLGH*QQRAIPGTQNF
Trigger: GAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR CCA 72 bp TGCCATCCTACAGGGGCCCGTGCCTGGCCTCATACTTaGCAAGTATGTTCTTGCATTTGCCCAGCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: CHPTGARAWPHT*QVCSCICPAPS
Trigger: GGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTATGAGGCCAGGCACGGGCCCCTGTAGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR CCA 72 bp CCCCACCAAACCAGTGGGTTAGAAGGAACCTCTGGGTaGTCTAGTACAGGTTTCCATTCCACCCACCCCACT +
Preference number: 3 (lower is better)
Translates to: PHQTSGLEGTSG*SSTGFHSTHPT
Trigger: AGTGGGGTGGGTGGAATGGAAACCTGTACTAGACCACCCAGAGGTTCCTTCTAACCCACTGGTTTGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR TCA 72 bp GACTCTCATAATAGCTGCAGCGTGCAGACATGCGTCTaGCTCCGGTTGACCCAAATCACTCAGAGTCAAGCC +
Preference number: 3 (lower is better)
Translates to: DSHNSCSVQTCV*LRLTQITQSQA
Trigger: GGCTTGACTCTGAGTGATTTGGGTCAACCGGAGTCAGACGCATGTCTGCACGCTGCAGCTATTATGAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR CAA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGGTCAGAAAGGTTGGTTaGCGTGTGGTGCTATCAGAC +
Preference number: 3 (lower is better)
Translates to: MARAKEHAHAHTADHTHEVRKVG*RVVLSD
Trigger: GTCTGATAGCACCACACGCAAACCAACCTTTCTGAC...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGGTCAGAAAGGTTGGTTaGCGTGTGGTGCTATCAGAC +
Preference number: 3 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMVRKVG*RVVLSD
Trigger: GTCTGATAGCACCACACGCAAACCAACCTTTCTGAC...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp GAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGGAACTCAGAATTTCGACTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 3 (lower is better)
Translates to: ELSGALAATCHSRNSEFRLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...TCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR GCA 72 bp TGGAATCCCATCTGTACTCTCCTCAAAGGGTCCTTCTaGTTTGAGGGATGGGTCAGTGGAGGCCTGTTGTAT +
Preference number: 3 (lower is better)
Translates to: WNPICTLLKGSF*FEGWVSGGLLY
Trigger: ATACAACAGGCCTCCACTGACCCATCCCTCAAAGCAGAAGGACCCTTTGAGGAGAGTACAGATGGGATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR TCA 72 bp TCCCATCTGTACTCTCCTCAAAGGGTCCTTCTGCTTTaGGGGATGGGTCAGTGGAGGCCTGTTGTATTTGAA +
Preference number: 3 (lower is better)
Translates to: SHLYSPQRVLLL*GMGQWRPVVFE
Trigger: TTCAAATACAACAGGCCTCCACTGACCCATCCCTCAAAGCAGAAGGACCCTTTGAGGAGAGTACAGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR CAA 90 bp AAGACTTTGCGAGCTTTCTTGATCATGGGCTGTGGCTTCAGTTCTTCCTCAGAGGTCAGAAAGGTTGGTTaGCGTGTGGTGCTATCAGAC +
Preference number: 3 (lower is better)
Translates to: KTLRAFLIMGCGFSSSSEVRKVG*RVVLSD
Trigger: GTCTGATAGCACCACACGCAAACCAACCTTTCTGAC...CTCTGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR CAA 90 bp GAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGGAACTCAGAATTTCGATGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAG +
Preference number: 3 (lower is better)
Translates to: ELSGALAATCHSRNSEFRWHLSL*ELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA...TCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp CCAAATCACTCAGAGTCAAGCCATGGCCTCCCGCTCCATGAAGCAGATCTGCCTTCCAAGACGCAGTTTTaGGCTCATGTACTGATAAAT +
Preference number: 3 (lower is better)
Translates to: PNHSESSHGLPLHEADLPSKTQF*AHVLIN
Trigger: ATTTATCAGTACATGAGCCAAAAACTGCGTCTTGGA...AGGCAGATCTGCTTCATGGAGCGGGAGGCCATGGCTTGACTCTGAGTGATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR CAA 90 bp TACTTGGCAAGTATGTTCTTGCATTTGCCCAGCTCCTTCCTCAAGTCAGCCACCTCAGAGAACTTGCGTTaGCGAGGGTCAAACATTTCC +
Preference number: 3 (lower is better)
Translates to: YLASMFLHLPSSFLKSATSENLR*RGSNIS
Trigger: GGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGA...GGTGGCTGACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR-3UTR CAA 90 bp GTCATCCTTCAGGTCATCAGGGATGAAGACTTTGCGAGCTTTCTTGATCATGGGTCTTCCTCAGAGAACTaGCGTTTGCGAGGGTCAAAC +
Preference number: 3 (lower is better)
Translates to: VILQVIRDEDFASFLDHGSSSEN*RLRGSN
Trigger: GTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGA...CCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAAGGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
3UTR GCA 72 bp GGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTaGCATTCCAGGAACTCAGAATTTCGAAGTGAACAT +
Preference number: 3 (lower is better)
Translates to: GRKELSGALAAT*HSRNSEFRSEH
Trigger: ATGTTCACTTCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR CCA 72 bp AGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATaGCACCTTTCTTTGTTGGAACTAAAAGACGATGAG +
Preference number: 3 (lower is better)
Translates to: RPARGLLSLVKT*HLSLLELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGTGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAG +
Preference number: 3 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMWHLSL*ELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGACATGGCACCTTTCTTaGTTGGAACTAAAAGACGAT +
Preference number: 3 (lower is better)
Translates to: MARAKEHAHAHTADHTHETWHLS*LELKDD
Trigger: ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGT...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp GAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGGAACTCAGAATTTCGAACATGGCACCTTTCTTaGTTGGAACTAAAAGACGAT +
Preference number: 3 (lower is better)
Translates to: ELSGALAATCHSRNSEFRTWHLS*LELKDD
Trigger: ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGT...TCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR TCA 72 bp TGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATC +
Preference number: 3 (lower is better)
Translates to: WESVVFMPLVKC*CQKGWFACGAI
Trigger: GATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACAACTGACTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 3 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp AAAAATGACAAAGGGACTCTCATAATAGCTGCAGCGTGCAGACATGCGTCTGACCACCTGAACAATGTATaGCAATTCCAATACACCCCC +
Preference number: 3 (lower is better)
Translates to: KNDKGTLIIAAACRHASDHLNNV*QFQYTP
Trigger: GGGGGTGTATTGGAATTGCAATACATTGTTCAGGTG...GTCAGACGCATGTCTGCACGCTGCAGCTATTATGAGAGTCCCTTTGTCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR CAA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAG +
Preference number: 3 (lower is better)
Translates to: CVYASGKVLMSERLVCVWWHLSL*ELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp CTTCCTGAAGAGAAAGAAGTAATGATCTACAGCCCTCCCCTCAACAAACTACCTCTACAATTCGCCTCTTaGCCTGTAAAAAGGCCAACT +
Preference number: 3 (lower is better)
Translates to: LPEEKEVMIYSPPLNKLPLQFAS*PVKRPT
Trigger: AGTTGGCCTTTTTACAGGCAAAGAGGCGAATTGTAG...AGGTAGTTTGTTGAGGGGAGGGCTGTAGATCATTACTTCTTTCTCTTCAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR CAA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACGTCAGAAAGGTTGGTTaGCGTGTGGTGCTATCAGAC +
Preference number: 3 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNVRKVG*RVVLSD
Trigger: GTCTGATAGCACCACACGCAAACCAACCTTTCTGAC...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTGTCAGAAAGGTTGGTTaGCGTGTGGTGCTATCAGAC +
Preference number: 3 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFVRKVG*RVVLSD
Trigger: GTCTGATAGCACCACACGCAAACCAACCTTTCTGAC...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTCTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 3 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
3UTR-3UTR CAA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATCTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 3 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGATGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAG +
Preference number: 3 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGWHLSL*ELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR TCA 72 bp GACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATaGGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAA +
Preference number: 3 (lower is better)
Translates to: DMAPFFVGTKRR*EGYLKMARAKE
Trigger: TTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR-3UTR CAA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTCTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 3 (lower is better)
Translates to: QELVLLKTEIHYFTRALFLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR TCA 72 bp AATTCTTGCTTCTTCCGAAAACAGACCCTAGACATCTaGTTGTACATTTGGAATTACTGTGAGTTCCCCACC +
Preference number: 3 (lower is better)
Translates to: NSCFFRKQTLDI*LYIWNYCEFPT
Trigger: GGTGGGGAACTCACAGTAATTCCAAATGTACAATCAGATGTCTAGGGTCTGTTTTCGGAAGAAGCAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CCA 72 bp TTGAAGACAAAAGGCCTATCACAGTCTTGCCTAATGTaGTATTTGAATGGTTCAAAGTGGCCACTTCCTGAA +
Preference number: 3 (lower is better)
Translates to: LKTKGLSQSCLM*YLNGSKWPLPE
Trigger: TTCAGGAAGTGGCCACTTTGAACCATTCAAATACCACATTAGGCAAGACTGTGATAGGCCTTTTGTCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR-3UTR CAA 90 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATTGTTATGTTTGGTAAGGATACACCCCCATCTCTaGCTGTTATCTACAGCTTGT +
Preference number: 3 (lower is better)
Translates to: RSLWCCQKDNGLLLCLVRIHPHL*LLSTAC
Trigger: ACAAGCTGTAGATAACAGCAAGAGATGGGGGTGTAT...CCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR TCA 72 bp CCCATCTCTTGCTGTTATCTACAGCTTGTGACAAAATaGACACCTTGTAGAAATATCCTACTGGTTGGGTTT +
Preference number: 3 (lower is better)
Translates to: PISCCYLQLVTK*TPCRNILLVGF
Trigger: AAACCCAACCAGTAGGATATTTCTACAAGGTGTTCATTTTGTCACAAGCTGTAGATAACAGCAAGAGATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
3UTR-3UTR CAA 90 bp AAGGTGCTCAAAATTAAAGACTTTATGTCGACTTATTCACACACATACACACACAATCCAGATCTCCAATaGCCATCACACATAGGCAAG +
Preference number: 3 (lower is better)
Translates to: KVLKIKDFMSTYSHTYTHNPDLQ*PSHIGK
Trigger: CTTGCCTATGTGTGATGGCAATTGGAGATCTGGATT...GTGTGTGTATGTGTGTGAATAAGTCGACATAAAGTCTTTAATTTTGAGCACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCGCCAGGGTGAAGGGGTaGAGAGGCCCGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GPQGRKELSGALAATCHSARVKG*RGPAAE
Trigger: CTCAGCAGCCGGGCCTCTGCACCCCTTCACCCTGGC...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCCAGGAATGCCGACTaGGGGACCGTCGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAPRNAD*GTVGLL
Trigger: TAACAGCCCGACGGTCCCCCAGTCGGCATTCCTGGG...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCATTTGCTGGCAACAGCTaGCCTGGTCTGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAFAGNS*PGLMGL
Trigger: GAGCCCCATCAGACCAGGTCAGCTGTTGCCAGCAAA...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGGCCAGGGTGAAGGGGTaGAGAGGCCCGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHEARVKG*RGPAAE
Trigger: CTCAGCAGCCGGGCCTCTGCACCCCTTCACCCTGGC...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCAGCCAGCCTGCAAAAATaGCATCCTACAGGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAASLQK*HPTGAR
Trigger: ACGGGCCCCTGTAGGATGGCATTTTTGCAGGCTGGC...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCAACAGCTGACCTGGTCTaGTGGGGCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMATADLV*WGSAYS
Trigger: ACTGTATGCAGAGCCCCATCAGACCAGGTCAGCTGT...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAHTVRR*DARVKG
Trigger: CCCCTTCACCCTGGCATCCCATCTCCGAACTGTATG...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCATGGCAACAGCTGACCTaGTCTGATGGGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAWQQLT*SDGALH
Trigger: ATGCAGAGCCCCATCAGACCAGGTCAGCTGTTGCCA...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCATGGCTCATAACCCACTaGGACCTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAWLITH*DLDGVR
Trigger: CCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCA...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAAGTCAGCCACCTCCTaGCGGAGGGCCGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHKSATS*RRAEFS
Trigger: GGAGAACTCGGCCCTCCGCCAGGAGGTGGCTGACTT...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAACTGTCTGGGGCACTaGCAGCAACGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: GPQGRKELSGALAATCHSNCLGH*QQRAIP
Trigger: TGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTT...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCATGGTGTATTGCGGTTTaGTGGCAACAGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAWCIAV*WQQLTW
Trigger: CCAGGTCAGCTGTTGCCAGCAAACCGCAATACACCA...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACATGCTGAGATGGGCTaGGGGGAATGCCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAHAEMG*GECHFL
Trigger: CAGAAAATGGCATTCCCCCCAGCCCATCTCAGCATG...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCCATGCTGAGATGGGCTaGGGGGAATGCCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: GPQGRKELSGALAATCHSHAEMG*GECHFL
Trigger: CAGAAAATGGCATTCCCCCCAGCCCATCTCAGCATG...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAAAGTCAGCCACCTCCTaGCGGAGGGCCGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTKSATS*RRAEFS
Trigger: GGAGAACTCGGCCCTCCGCCAGGAGGTGGCTGACTT...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCATTTGCTGGCAACAGCTaGTCTGATGGGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAFAGNS*SDGALH
Trigger: ATGCAGAGCCCCATCAGACCAGCTGTTGCCAGCAAA...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR GCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCGGCTCCCCGGCGACGTaGAGGATGCTCTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCGSPAT*RMLSPA
Trigger: GGCAGGTGAGAGCATCCTGCACGTCGCCGGGGAGCC...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCGCCAGGGTGAAGGGGTaGAGAGGCCCGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCARVKG*RGPAAE
Trigger: CTCAGCAGCCGGGCCTCTGCACCCCTTCACCCTGGC...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCCTCAAAGGGTCCTTCTaGTTTGAGGGATGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: GPQGRKELSGALAATCHSLKGSF*FEGWVS
Trigger: ACTGACCCATCCCTCAAAGCAGAAGGACCCTTTGAG...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 72 bp CATGGCCTCCCGCTCCATGAAGCAGATCTGCCTTGTTaGCTAGTTAACTGCCCTGGATGGAGAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HGLPLHEADLPC*LVNCPGWRGSQ
Trigger: CTGGCTGCCTCTCCATCCAGGGCAGTTAACTAGCAAACAAGGCAGATCTGCTTCATGGAGCGGGAGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACACAGCTGACCTGGTCTaGTGGGGCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHTADLV*WGSAYS
Trigger: ACTGTATGCAGAGCCCCATCAGACCAGGTCAGCTGT...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACATTTGCTGGCAACAGCTaGCCTGGTCTGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTFAGNS*PGLMGL
Trigger: GAGCCCCATCAGACCAGGTCAGCTGTTGCCAGCAAA...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAAGGGTCCTTCTGCTTTaGGGGATGGGTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTRVLLL*GMGQWR
Trigger: CCTCCACTGACCCATCCCTCAAAGCAGAAGGACCCT...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCCTGCGCGGTTACACGTaGGCCTGCTCCGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESLRGYT*ACSALP
Trigger: GGGGAGAGCGGAGCAGGCTCACGTGTAACCGCGCAG...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573945.5
CDS-3UTR GCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCGCCAGGGTGAAGGGGTaGAGAGGCCCGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESARVKG*RGPAAE
Trigger: CTCAGCAGCCGGGCCTCTGCACCCCTTCACCCTGGC...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCATGGCAAGTATGTTCTTaGATTTGCCCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAWQVCS*ICPAPS
Trigger: GGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCA...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGGAACTCAGAATTTCGAGCCAGCCTGCAAAAATaGCATCCTACAGGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ELSGALAATCHSRNSEFRASLQK*HPTGAR
Trigger: ACGGGCCCCTGTAGGATGGCATTTTTGCAGGCTGGC...TCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCAGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACCCACTGGGACCTGGATaGTGTCAGGATCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHPLGPG*CQDQWD
Trigger: GTCCCATTGATCCTGACACCATCCAGGTCCCAGTGG...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCAAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMARLVCV*CYQTGN
Trigger: GTTTCCTGTCTGATAGCACCACACGCAAACCAACCT...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR CAA 72 bp ATGCCATCCTACAGGGGCCCGTGCCTGGCCTCATACTaGGCAAGTATGTTCTTGCATTTGCCCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: MPSYRGPCLASY*ASMFLHLPSSF
Trigger: GAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTATGAGGCCAGGCACGGGCCCCTGTAGGATGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR TCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGACAGCTGACCTGGTCTaGTGGGGCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHETADLV*WGSAYS
Trigger: ACTGTATGCAGAGCCCCATCAGACCAGGTCAGCTGT...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAACAGCTGACCTGGTCTaGTGGGGCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTTADLV*WGSAYS
Trigger: ACTGTATGCAGAGCCCCATCAGACCAGGTCAGCTGT...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGTTTGCTGGCAACAGCTaGCCTGGTCTGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMFAGNS*PGLMGL
Trigger: GAGCCCCATCAGACCAGGTCAGCTGTTGCCAGCAAA...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGGCCAGGGTGAAGGGGTaGAGAGGCCCGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVARVKG*RGPAAE
Trigger: CTCAGCAGCCGGGCCTCTGCACCCCTTCACCCTGGC...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGGGTCTGATGGGGCTCTaGATACAGTTCGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHEGLMGL*IQFGDG
Trigger: CCCATCTCCGAACTGTATGCAGAGCCCCATCAGACC...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACATGGCAACAGCTGACCTaGTCTGATGGGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTWQQLT*SDGALH
Trigger: ATGCAGAGCCCCATCAGACCAGGTCAGCTGTTGCCA...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACACCACTGGGACCTGGATaGTGTCAGGATCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTPLGPG*CQDQWD
Trigger: GTCCCATTGATCCTGACACCATCCAGGTCCCAGTGG...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGTGGCTCATAACCCACTaGGACCTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHEWLITH*DLDGVR
Trigger: CCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCA...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACATGGCTCATAACCCACTaGGACCTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTWLITH*DLDGVR
Trigger: CCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCA...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAGGAACGAGGCCCGGATaGCGATCTGGTTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTGTRPG*RSGSLS
Trigger: TGAAAGAGAACCAGATCGCCATCCGGGCCTCGTTCC...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR CAA 72 bp GGTGCTGAGACCCCAGTGCTAAATCCAGATCTCCAATaGCCATCACACATAGGCAAGCAGGCCTGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GAETPVLNPDLQ*PSHIGKQAWSH
Trigger: ATGGGACCAGGCCTGCTTGCCTATGTGTGATGGCAATTGGAGATCTGGATTTAGCACTGGGGTCTCAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACCTTTGCGAGCTTTCTTaGTCATGGGCTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHLCELS*SWAVAS
Trigger: TGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAG...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGTACATTTGGAATTACTGTGAGTTCCCCACCAAACCAGTGGGTTAGAAGGAACATCCGGCCGCCCATGTaGCGCGGCCCTGACAAGAGT +
Preference number: 4 (lower is better)
Translates to: CTFGITVSSPPNQWVRRNIRPPM*RGPDKS
Trigger: ACTCTTGTCAGGGCCGCGGCACATGGGCGGCCGGAT...GTTCCTTCTAACCCACTGGTTTGGTGGGGAACTCACAGTAATTCCAAATGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGCTTTCGGGTTTCCAGTaGAGACGGTCCCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQLSGFQ*RRSQES
Trigger: GCTCTCCTGGGACCGTCTGCACTGGAAACCCGAAAG...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGGGTCTGATGGGGCTCTaGATACAGTTCGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMGLMGL*IQFGDG
Trigger: CCCATCTCCGAACTGTATGCAGAGCCCCATCAGACC...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TACTTGGCAAGTATGTTCTTGCATTTGCCCAGCTCCTTCCTCAAGTCAGCCACCGCCAGCCTGCAAAAATaGCATCCTACAGGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: YLASMFLHLPSSFLKSATASLQK*HPTGAR
Trigger: ACGGGCCCCTGTAGGATGGCATTTTTGCAGGCTGGC...GGTGGCTGACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR GCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGGCCAGCCTGCAAAAATaGCATCCTACAGGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQASLQK*HPTGAR
Trigger: ACGGGCCCCTGTAGGATGGCATTTTTGCAGGCTGGC...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCGCCAGAGGAGGCTCCTaGGCGGTTACACGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESARGGS*AVTREP
Trigger: AGGCTCACGTGTAACCGCGCAGGAGCCTCCTCTGGC...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573945.5
CDS-3UTR CCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCCCCAGGAATGCCGACTaGGGGACCGTCGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESPRNAD*GTVGLL
Trigger: TAACAGCCCGACGGTCCCCCAGTCGGCATTCCTGGG...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGCCACTGGGACCTGGATaGTGTCAGGATCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMPLGPG*CQDQWD
Trigger: GTCCCATTGATCCTGACACCATCCAGGTCCCAGTGG...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGCGTCGCGGGAGCGCTTaGCTGCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQRRGSA*LPCCSF
Trigger: GAAAGAACAACATGGCAGCCAAGCGCTCCCGCGACG...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GCTTCAGTTCTTCCTCAGAGAACTTGCGTTTGCGAGGGTCAAACATTTCCTGGCCGTCGCGGGAGCGCTTaGCTGCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ASVLPQRTCVCEGQTFPGRRGSA*LPCCSF
Trigger: GAAAGAACAACATGGCAGCCAAGCGCTCCCGCGACG...GCCAGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGAACTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR TCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGACAGCTGACCTGGTCTaGTGGGGCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQTADLV*WGSAYS
Trigger: ACTGTATGCAGAGCCCCATCAGACCAGGTCAGCTGT...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACACTTTGCGAGCTTTCTTaGTCATGGGCTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTLCELS*SWAVAS
Trigger: TGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAG...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACTCAGAATTTCGAAGTaGACATTTTTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMALRISK*TFLWQM
Trigger: CATCTGCCACAAAAATGTTCACTTCGAAATTCTGAG...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp TGTTGTTCTTTCTGCGCCTTGCCCAGTACTTGTCATCCTTCAGGTCATCAGGGATGGCAACAGCTGGTCTaGTGGGGCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: CCSFCALPSTCHPSGHQGWQQLV*WGSAYS
Trigger: ACTGTATGCAGAGCCCCATCAGACCAGCTGTTGCCA...TCCCTGATGACCTGAAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR GCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGGCCAGGGTGAAGGGGTaGAGAGGCCCGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQEARVKG*RGPAAE
Trigger: CTCAGCAGCCGGGCCTCTGCACCCCTTCACCCTGGC...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACATGGGACTTGGTGTATTaGGGTTTGCTGGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTWDLVY*GLLATA
Trigger: AGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCA...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGTGGGACTTGGTGTATTaGGGTTTGCTGGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHEWDLVY*GLLATA
Trigger: AGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCA...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACGTTCTTTCTGCGCCTTaGCCAGTACTTGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHVLSAP*PVLVIL
Trigger: AAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAAC...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGGAACTCAGAATTTCGACCTCCCATTTCCCTCTaGTTCCTTGTCCTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: ELSGALAATCHSRNSEFRPPISL*FLVLGN
Trigger: ATTCCCTAGGACAAGGAAGCAGAGGGAAATGGGAGG...TCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAGACTCTCATAATAGCTaGAGCGTGCAGACATGCGTC +
Preference number: 4 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTDSHNS*SVQTCV
Trigger: GACGCATGTCTGCACGCTGCAGCTATTATGAGAGTC...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGCATGCTGAGATGGGCTaGGGGGAATGCCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMHAEMG*GECHFL
Trigger: CAGAAAATGGCATTCCCCCCAGCCCATCTCAGCATG...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGCATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQHTVRR*DARVKG
Trigger: CCCCTTCACCCTGGCATCCCATCTCCGAACTGTATG...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACATGTATTGCGGTTTGCTaGCAACAGCTGACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTCIAVC*QQLTWS
Trigger: AGACCAGGTCAGCTGTTGCCAGCAAACCGCAATACA...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACATGTATTGCGGTTTGCTaGCAACAGCTGACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTCIAVC*QQLTWS
Trigger: AGACCAGGTCAGCTGTTGCCAGCAAACCGCAATACA...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGTGTATTGCGGTTTGCTaGCAACAGCTGACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHECIAVC*QQLTWS
Trigger: AGACCAGGTCAGCTGTTGCCAGCAAACCGCAATACA...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGAAGTCAGCCACCTCCTaGCGGAGGGCCGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVKSATS*RRAEFS
Trigger: GGAGAACTCGGCCCTCCGCCAGGAGGTGGCTGACTT...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp AAGACTTTGCGAGCTTTCTTGATCATGGGCTGTGGCTTCAGTTCTTCCTCAGAGACAGGGGCCCGTGCCTaGCCTCATACTTGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: KTLRAFLIMGCGFSSSSETGARA*PHTWQV
Trigger: TACTTGCCAAGTATGAGGCCAGGCACGGGCCCCTGT...CTCTGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CCA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: GPQGRKELSGALAATCHSRCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCAGTAGAAATATCCTACTaGTTGGGTTTCCCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: GRGWETRERAPQSSKDMAVEISY*LGFPSL
Trigger: TAGACTTGGGAAACCCAACCAGTAGGATATTTCTAC...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCCCTTGGCCTTGCCAGTaGGGGTACCTAGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCPWPCQ*GYLGAE
Trigger: TTCTGCTCCTAGGTACCCCCACTGGCAAGGCCAAGG...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCACGTGGAGGAGACCTTaGCCTTGCCAGTGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCTWRRP*PCQWGY
Trigger: GTACCCCCACTGGCAAGGCCAAGGTCTCCTCCACGT...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCCAGATGCGATCTTTGTaGTGTTGCCAAAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: GPQGRKELSGALAATCHSQMRSL*CCQKDN
Trigger: ATTATCCTTTTGGCAACACCACAAAGATCGCATCTG...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp GAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGGAACTCAGAATTTCGAGGCAGGGTCCTTCTCTaGCTGCTGTCTTTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: ELSGALAATCHSRNSEFRGRVLL*LLSFVD
Trigger: ATCTACAAAAGACAGCAGCCAGAGAAGGACCCTGCC...TCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575345.5
CDS-3UTR TCA 90 bp TGTACATTTGGAATTACTGTGAGTTCCCCACCAAACCAGTGGGTTAGAAGGAACAATGCGTCTTCGTGGTaGAGGGGGAGCTTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: CTFGITVSSPPNQWVRRNNASSW*RGSFSG
Trigger: CCCGCTGAAGCTCCCCCTTCACCACGAAGACGCATT...GTTCCTTCTAACCCACTGGTTTGGTGGGGAACTCACAGTAATTCCAAATGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCTTTGCTGGCAACAGCTaGCCTGGTCTGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESFAGNS*PGLMGL
Trigger: GAGCCCCATCAGACCAGGTCAGCTGTTGCCAGCAAA...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACATCAGGTCATCAGGGATaGAGACTTTGCGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTSGHQG*RLCELS
Trigger: AGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGA...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACATTAACCACAGTTTGTaGCAACACCATCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHINHSL*QHHPLL
Trigger: CAGAAGGGGATGGTGTTGTCACAAACTGTGGTTAAT...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAAGCAGAAAACATGCTaGTGTGTCAGTGATAGGGCT +
Preference number: 4 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHKQKTC*CVSDRA
Trigger: AGCCCTATCACTGACACATCAGCATGTTTTCTGCTT...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGGACGAGGTAGGTTTCTaGAACCTCTCCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQDEVGF*NLSWHT
Trigger: TGTGTGCCAGGAGAGGTTTCAGAAACCTACCTCGTC...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCTTCCTCAGAGAACTTaGGTTTGCGAGGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHELPQRT*VCEGQT
Trigger: TGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAG...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGGCCAGCCTGCAAAAATaGCATCCTACAGGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWASLQK*HPTGAR
Trigger: ACGGGCCCCTGTAGGATGGCATTTTTGCAGGCTGGC...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCAGGAGACCTTGGCCTTaGCAGTGGGGGTACCTAGGA +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCRRPWP*QWGYLG
Trigger: TCCTAGGTACCCCCACTGGCAAGGCCAAGGTCTCCT...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCCCAGGAATGCCGACTaGGGGACCGTCGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: WHLSLLELKDDERATLKWPRNAD*GTVGLL
Trigger: TAACAGCCCGACGGTCCCCCAGTCGGCATTCCTGGG...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCCATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCHTVRR*DARVKG
Trigger: CCCCTTCACCCTGGCATCCCATCTCCGAACTGTATG...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACATGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGT +
Preference number: 4 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTWCQDQ*DLVYCG
Trigger: ACCGCAATACACCAAGTCCCATTGATCCTGACACCA...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCCCACTGGGACCTGGATaGTGTCAGGATCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCPLGPG*CQDQWD
Trigger: GTCCCATTGATCCTGACACCATCCAGGTCCCAGTGG...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGGGGTCAAACATTTCCTaGCCAGGGATGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQGSNIS*PGMLER
Trigger: CCTTTCCAGCATCCCTGGCCAGGAAATGTTTGACCC...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTGGGTCAAACATTTCCTaGCCAGGGATGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTGSNIS*PGMLER
Trigger: CCTTTCCAGCATCCCTGGCCAGGAAATGTTTGACCC...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCCGTCGCGGGAGCGCTTaGCTGCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCRRGSA*LPCCSF
Trigger: GAAAGAACAACATGGCAGCCAAGCGCTCCCGCGACG...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCGGAACGAGGCCCGGATaGCGATCTGGTTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCGTRPG*RSGSLS
Trigger: TGAAAGAGAACCAGATCGCCATCCGGGCCTCGTTCC...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGAAGTCAGCCACCTCCTaGCGGAGGGCCGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WHLSLLELKDDERATLKWKSATS*RRAEFS
Trigger: GGAGAACTCGGCCCTCCGCCAGGAGGTGGCTGACTT...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTCTTTGCGAGCTTTCTTaGTCATGGGCTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTLCELS*SWAVAS
Trigger: TGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAG...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCGCATTGCTGATGGATTaGCGAGGAGACCACCAGATC +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCALLMD*RGDHQI
Trigger: GATCTGGTGGTCTCCTCGTCAATCCATCAGCAATGC...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR TCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCGCGTCTGACTCCGGTTaGCCCAAATCACTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCASDSG*PKSLRV
Trigger: GACTCTGAGTGATTTGGGTCAACCGGAGTCAGACGC...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp CTTCCTGAAGAGAAAGAAGTAATGATCTACAGCCCTCCCCTCAACAAACTACCTACACCTGCAGGGTGCTaGGACCCCAGTGCTAAATCC +
Preference number: 4 (lower is better)
Translates to: LPEEKEVMIYSPPLNKLPTPAGC*DPSAKS
Trigger: GGATTTAGCACTGGGGTCTCAGCACCCTGCAGGTGT...AGGTAGTTTGTTGAGGGGAGGGCTGTAGATCATTACTTCTTTCTCTTCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCGGTCTGATGGGGCTCTaGATACAGTTCGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESGLMGL*IQFGDG
Trigger: CCCATCTCCGAACTGTATGCAGAGCCCCATCAGACC...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGGTTCTTTCTGCGCCTTaGCCAGTACTTGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMVLSAP*PVLVIL
Trigger: AAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAAC...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGGAACTCAGAATTTCGAGTATGTTCTTGCATTTaGCCAGCTCCTTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: ELSGALAATCHSRNSEFRVCSCI*PAPSSS
Trigger: ACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATAC...TCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAGTATGTTCTTGCATTTaGCCAGCTCCTTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTVCSCI*PAPSSS
Trigger: ACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATAC...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACATCAGAAAGGTTGGTTTaGGTGTGGTGCTATCAGACA +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTSERLV*VWCYQT
Trigger: TGTCTGATAGCACCACACGCAAACCAACCTTTCTGA...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCCATGCTGAGATGGGCTaGGGGGAATGCCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCHAEMG*GECHFL
Trigger: CAGAAAATGGCATTCCCCCCAGCCCATCTCAGCATG...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGCATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWHTVRR*DARVKG
Trigger: CCCCTTCACCCTGGCATCCCATCTCCGAACTGTATG...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGGCAACAGCTGACCTaGTCTGATGGGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWWQQLT*SDGALH
Trigger: ATGCAGAGCCCCATCAGACCAGGTCAGCTGTTGCCA...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTTGTATTGCGGTTTGCTaGCAACAGCTGACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTCIAVC*QQLTWS
Trigger: AGACCAGGTCAGCTGTTGCCAGCAAACCGCAATACA...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCTGGCTCATAACCCACTaGGACCTGGATGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCWLITH*DLDGVR
Trigger: CCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCA...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGAGGGCTACCTTAAAATaGCAAGAGCAAAGGAACACG +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHERATLK*QEQRNT
Trigger: CGTGTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCT...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCGTTAACTGCCCTGGATaGAGAGGCAGCCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESVNCPG*RGSQSR
Trigger: TCTGGACTGGCTGCCTCTCCATCCAGGGCAGTTAAC...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp CTTGGCAAGTATGTTCTTGCATTTGCCCAGCTCCTTCCTCAAGTCAGCCACCTCACTATTTCTCACGAATaGCAGGGTCCTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LGKYVLAFAQLLPQVSHLTISHE*QGPSLA
Trigger: AGCCAGAGAAGGACCCTGCCATTCGTGAGAAATAGT...GAGGTGGCTGACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR TCA 90 bp AAGGTGCTCAAAATTAAAGACTTTATGTCGACTTATTCACACACATACACACACTCTCCAGCAGGGACCTaGGCACGCCGTAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KVLKIKDFMSTYSHTYTHSPAGT*ARRREA
Trigger: CGCCTCCCTACGGCGTGCTCAGGTCCCTGCTGGAGA...GTGTGTGTATGTGTGTGAATAAGTCGACATAAAGTCTTTAATTTTGAGCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAGGAACTAAAAGACGATaGGAGGGCTACCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTGTKRR*EGYLKM
Trigger: CATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCC...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAACACCATCCCCTTCTaGGATACACCAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMNTIPF*DTPVSF
Trigger: AAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTT...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp TGTACATTTGGAATTACTGTGAGTTCCCCACCAAACCAGTGGGTTAGAAGGAACGTGCAGACATGCGTCTaGCTCCGGTTGACCCAAATC +
Preference number: 4 (lower is better)
Translates to: CTFGITVSSPPNQWVRRNVQTCV*LRLTQI
Trigger: GATTTGGGTCAACCGGAGTCAGACGCATGTCTGCAC...GTTCCTTCTAACCCACTGGTTTGGTGGGGAACTCACAGTAATTCCAAATGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCTGGTGTATTGCGGTTTaGTGGCAACAGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCWCIAV*WQQLTW
Trigger: CCAGGTCAGCTGTTGCCAGCAAACCGCAATACACCA...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGCAGAGAACTTGCGTTTaGGAGGGTCAAACATTTCCT +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMQRTCV*EGQTFP
Trigger: AGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTG...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTGTTCTTTCTGCGCCTTaGCCAGTACTTGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTVLSAP*PVLVIL
Trigger: AAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAAC...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGCCATGTTGTTCTTTCTaGGCCTTGCCCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQPCCSF*ALPSTC
Trigger: ACAAGTACTGGGCAAGGCGCAGAAAGAACAACATGG...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTTGGCAAGTATGTTCTTaGATTTGCCCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTWQVCS*ICPAPS
Trigger: GGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCA...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGTGGCAAGTATGTTCTTaGATTTGCCCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQWQVCS*ICPAPS
Trigger: GGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCA...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGTTGGTTTGCGTGTGGTaGTATCAGACAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHELVCVW*YQTGNK
Trigger: TTTGTTTCCTGTCTGATAGCACCACACGCAAACCAA...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACATTGGTTTGCGTGTGGTaGTATCAGACAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTLVCVW*YQTGNK
Trigger: TTTGTTTCCTGTCTGATAGCACCACACGCAAACCAA...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGTCAGAAAGGTTGGTTTaGGTGTGGTGCTATCAGACA +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMSERLV*VWCYQT
Trigger: TGTCTGATAGCACCACACGCAAACCAACCTTTCTGA...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCGCACTGGCAGCAACGTaGCATTCCAGGAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESALAAT*HSRNSE
Trigger: TTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGC...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGGCCACTGATAATTCTTaGTTCTTCCGAAAACAGACC +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHEATDNS*FFRKQT
Trigger: GGTCTGTTTTCGGAAGAAGCAAGAATTATCAGTGGC...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACCCCAGGAATGCCGACTaGGGGACCGTCGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNPRNAD*GTVGLL
Trigger: TAACAGCCCGACGGTCCCCCAGTCGGCATTCCTGGG...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTCCCAGGAATGCCGACTaGGGGACCGTCGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFPRNAD*GTVGLL
Trigger: TAACAGCCCGACGGTCCCCCAGTCGGCATTCCTGGG...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGCATGCTGAGATGGGCTaGGGGGAATGCCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWHAEMG*GECHFL
Trigger: CAGAAAATGGCATTCCCCCCAGCCCATCTCAGCATG...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGAGGATCAATGGGACTTaGTGTATTGCGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQRINGT*CIAVCW
Trigger: CCAGCAAACCGCAATACACCAAGTCCCATTGATCCT...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GCTTCAGTTCTTCCTCAGAGAACTTGCGTTTGCGAGGGTCAAACATTTCCTGGCAGGATCAATGGGACTTaGTGTATTGCGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASVLPQRTCVCEGQTFPGRINGT*CIAVCW
Trigger: CCAGCAAACCGCAATACACCAAGTCCCATTGATCCT...GCCAGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGAACTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CCA 90 bp GCTTCAGTTCTTCCTCAGAGAACTTGCGTTTGCGAGGGTCAAACATTTCCTGGCTGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGT +
Preference number: 4 (lower is better)
Translates to: ASVLPQRTCVCEGQTFPGWCQDQ*DLVYCG
Trigger: ACCGCAATACACCAAGTCCCATTGATCCTGACACCA...GCCAGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGAACTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCACGTCGCGGGAGCGCTTaGCTGCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSRRGSA*LPCCSF
Trigger: GAAAGAACAACATGGCAGCCAAGCGCTCCCGCGACG...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGGGAACGAGGCCCGGATaGCGATCTGGTTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVGTRPG*RSGSLS
Trigger: TGAAAGAGAACCAGATCGCCATCCGGGCCTCGTTCC...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTAAGTCAGCCACCTCCTaGCGGAGGGCCGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFKSATS*RRAEFS
Trigger: GGAGAACTCGGCCCTCCGCCAGGAGGTGGCTGACTT...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACACAGGGGCCCGTGCCTaGCCTCATACTTGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LELKDDERATLKWQEQRNTGARA*PHTWQV
Trigger: TACTTGCCAAGTATGAGGCCAGGCACGGGCCCCTGT...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGGGCTACCTTAAAATaGCAAGAGCAAAGGAACACG +
Preference number: 4 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMRATLK*QEQRNT
Trigger: CGTGTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCT...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CCAAATCACTCAGAGTCAAGCCATGGCCTCCCGCTCCATGAAGCAGATCTGCCTAAATATCCTACTGGTTaGGTTTCCCAAGTCTATGAC +
Preference number: 4 (lower is better)
Translates to: PNHSESSHGLPLHEADLPKYPTG*VSQVYD
Trigger: GTCATAGACTTGGGAAACCCAACCAGTAGGATATTT...AGGCAGATCTGCTTCATGGAGCGGGAGGCCATGGCTTGACTCTGAGTGATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTCCCCACCAAACCAGTaGGTTAGAAGGAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWSPPNQ*VRRNLW
Trigger: CCAGAGGTTCCTTCTAACCCACTGGTTTGGTGGGGA...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 72 bp TTCAGGTCATCAGGGATGAAGACTTTGCGAGCTTTCTaGATCATGGGCTGTGGCTTCAGTTCTTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FRSSGMKTLRAF*IMGCGFSSSSE
Trigger: CTCTGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR TCA 90 bp GAAGACTTTGCGAGCTTTCTTGATCATGGGCTGTGGCTTCAGTTCTTCCTCAGATCAGGTCATCAGGGATaGAGACTTTGCGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: EDFASFLDHGLWLQFFLRSGHQG*RLCELS
Trigger: AGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGA...TCTGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR TCA 90 bp GCTTCAGTTCTTCCTCAGAGAACTTGCGTTTGCGAGGGTCAAACATTTCCTGGCCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ASVLPQRTCVCEGQTFPGPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...GCCAGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGAACTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR TCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTATTAACCACAGTTTGTaGCAACACCATCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTINHSL*QHHPLL
Trigger: CAGAAGGGGATGGTGTTGTCACAAACTGTGGTTAAT...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCTCAGAATTTCGAAGTaGACATTTTTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHELRISK*TFLWQM
Trigger: CATCTGCCACAAAAATGTTCACTTCGAAATTCTGAG...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACCAGCTTGTGACAAAATaGACACCTTGTAGAAATATC +
Preference number: 4 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHQLVTK*TPCRNI
Trigger: GATATTTCTACAAGGTGTTCATTTTGTCACAAGCTG...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR TCA 90 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATTGTTATGTTTGGTAAGGCCTAGGAGCAGAAGGTaGTCGCCACCTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSLWCCQKDNGLLLCLVRPRSRR*SPPGGQ
Trigger: CTGCCCTCCAGGTGGCGATCACCTTCTGCTCCTAGG...CCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAGGATGCTCTCACCTaGCTCGAACCCCTCGTTTTG +
Preference number: 4 (lower is better)
Translates to: WHLSLLELKDDERATLKWQDALT*LEPLVL
Trigger: CAAAACGAGGGGTTCGAGGCAGGTGAGAGCATCCTG...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGGGTCTGATGGGGCTCTaGATACAGTTCGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: WHLSLLELKDDERATLKWGLMGL*IQFGDG
Trigger: CCCATCTCCGAACTGTATGCAGAGCCCCATCAGACC...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGATGGTGTATTGCGGTTTaGTGGCAACAGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGWCIAV*WQQLTW
Trigger: CCAGGTCAGCTGTTGCCAGCAAACCGCAATACACCA...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTCAGAGAACTTGCGTTTaGGAGGGTCAAACATTTCCT +
Preference number: 4 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTQRTCV*EGQTFP
Trigger: AGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTG...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCCTTCCTCAGAGAACTTaGGTTTGCGAGGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCLPQRT*VCEGQT
Trigger: TGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAG...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTGGCAAGTATGTTCTTaGATTTGCCCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCWQVCS*ICPAPS
Trigger: GGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCA...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTGCCAGCCTGCAAAAATaGCATCCTACAGGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSASLQK*HPTGAR
Trigger: ACGGGCCCCTGTAGGATGGCATTTTTGCAGGCTGGC...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR GCA 90 bp CTTGGCAAGTATGTTCTTGCATTTGCCCAGCTCCTTCCTCAAGTCAGCCACCTCTTGGTTTGCGTGTGGTaGTATCAGACAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: LGKYVLAFAQLLPQVSHLLVCVW*YQTGNK
Trigger: TTTGTTTCCTGTCTGATAGCACCACACGCAAACCAA...GAGGTGGCTGACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR GCA 90 bp TGCCATGTTGTTCTTTCTGCGCCTTGCCCAGTACTTGTCATCCTTCAGGTCATCTCAGAAAGGTTGGTTTaGGTGTGGTGCTATCAGACA +
Preference number: 4 (lower is better)
Translates to: CHVVLSAPCPVLVILQVISERLV*VWCYQT
Trigger: TGTCTGATAGCACCACACGCAAACCAACCTTTCTGA...GATGACCTGAAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACAACATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR GCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCATAATAGCTGCAGCGTaGAGACATGCGTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESIIAAA*RHASDS
Trigger: GGAGTCAGACGCATGTCTGCACGCTGCAGCTATTAT...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WHLSLLELKDDERATLKWHTVRR*DARVKG
Trigger: CCCCTTCACCCTGGCATCCCATCTCCGAACTGTATG...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACTGGCAACAGCTGACCTaGTCTGATGGGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LELKDDERATLKWQEQRNWQQLT*SDGALH
Trigger: ATGCAGAGCCCCATCAGACCAGGTCAGCTGTTGCCA...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCAGGAACGAGGCCCGGATaGCGATCTGGTTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSGTRPG*RSGSLS
Trigger: TGAAAGAGAACCAGATCGCCATCCGGGCCTCGTTCC...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGACAGGGGCCCGTGCCTaGCCTCATACTTGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQETGARA*PHTWQV
Trigger: TACTTGCCAAGTATGAGGCCAGGCACGGGCCCCTGT...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHERCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTRCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAGGTCATCAGGGATGAAGACTTTGCGAGCTTTCTTGATCATGGGCTGTGGCTTAGGGCTACCTTAAAATaGCAAGAGCAAAGGAACACG +
Preference number: 4 (lower is better)
Translates to: QVIRDEDFASFLDHGLWLRATLK*QEQRNT
Trigger: CGTGTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCT...AAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CCA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGAACTGTCTGGGGCACTaGCAGCAACGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: WHLSLLELKDDERATLKWNCLGH*QQRAIP
Trigger: TGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTT...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGAAAGGTGATCGCCACCTaGAGGGCAGATCACTTAGTC +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGKVIAT*RADHLV
Trigger: GACTAAGTGATCTGCCCTCCAGGTGGCGATCACCTT...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGGGGAATGCCATTTTCTaGCAAAAACTCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWGNAIF*QKLLQV
Trigger: GACCTGGAGGAGTTTTTGTCAGAAAATGGCATTCCC...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTTTTGCTGGCAACAGCTaGCCTGGTCTGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFFAGNS*PGLMGL
Trigger: GAGCCCCATCAGACCAGGTCAGCTGTTGCCAGCAAA...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAGTTATCTACAGCTTGTaGCAAAATGAACACCTTGTA +
Preference number: 4 (lower is better)
Translates to: QRNTHTHIPLTTHMSTSTVIYSL*QNEHLV
Trigger: TACAAGGTGTTCATTTTGTCACAAGCTGTAGATAAC...TGTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR GCA 90 bp AAGGTGCTCAAAATTAAAGACTTTATGTCGACTTATTCACACACATACACACACCGGCGACGTGCAGGATaGTCTCACCTGCCTCGAACC +
Preference number: 4 (lower is better)
Translates to: KVLKIKDFMSTYSHTYTHRRRAG*SHLPRT
Trigger: GGTTCGAGGCAGGTGAGAGCATCCTGCACGTCGCCG...GTGTGTGTATGTGTGTGAATAAGTCGACATAAAGTCTTTAATTTTGAGCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATGGTCTGATGGGGCTCTaGATACAGTTCGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDGLMGL*IQFGDG
Trigger: CCCATCTCCGAACTGTATGCAGAGCCCCATCAGACC...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGATGGGACTTGGTGTATTaGGGTTTGCTGGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGWDLVY*GLLATA
Trigger: AGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCA...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCCTTCCTCAGAGAACTTaGGTTTGCGAGGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESLPQRT*VCEGQT
Trigger: TGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAG...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTACACCCCCATCTCTTaGTGTTATCTACAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCYTPIS*CYLQLV
Trigger: CACAAGCTGTAGATAACAGCAAGAGATGGGGGTGTA...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR GCA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTGCAGGCCTGGTCCCATaGCTTGGGATCGCTCTAATT +
Preference number: 4 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSAGLVP*LGIALI
Trigger: AATTAGAGCGATCCCAAGGCATGGGACCAGGCCTGC...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATTGGCAACAGCTGACCTaGTCTGATGGGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDWQQLT*SDGALH
Trigger: ATGCAGAGCCCCATCAGACCAGGTCAGCTGTTGCCA...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCTGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGT +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCWCQDQ*DLVYCG
Trigger: ACCGCAATACACCAAGTCCCATTGATCCTGACACCA...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCAGGGTCAAACATTTCCTaGCCAGGGATGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSGSNIS*PGMLER
Trigger: CCTTTCCAGCATCCCTGGCCAGGAAATGTTTGACCC...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACCGTCGCGGGAGCGCTTaGCTGCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNRRGSA*LPCCSF
Trigger: GAAAGAACAACATGGCAGCCAAGCGCTCCCGCGACG...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATGGAACGAGGCCCGGATaGCGATCTGGTTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDGTRPG*RSGSLS
Trigger: TGAAAGAGAACCAGATCGCCATCCGGGCCTCGTTCC...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CACACTCTGTGTTCTATTAATAGTACTCTTACTTATCTGGGGTTGGTAGAATTAAAGTCAGCCACCTCCTaGCGGAGGGCCGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: HTLCSINSTLTYLGLVELKSATS*RRAEFS
Trigger: GGAGAACTCGGCCCTCCGCCAGGAGGTGGCTGACTT...TAATTCTACCAACCCCAGATAAGTAAGAGTACTATTAATAGAACACAGAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTACAGGGGCCCGTGCCTaGCCTCATACTTGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFTGARA*PHTWQV
Trigger: TACTTGCCAAGTATGAGGCCAGGCACGGGCCCCTGT...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACACAGGGGCCCGTGCCTaGCCTCATACTTGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNTGARA*PHTWQV
Trigger: TACTTGCCAAGTATGAGGCCAGGCACGGGCCCCTGT...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAAC +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWRLVCV*CYQTGN
Trigger: GTTTCCTGTCTGATAGCACCACACGCAAACCAACCT...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATCCACCCACCCCACTGTaGAATCCCATCTGTACTCTC +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDPPTPL*NPICTL
Trigger: GAGAGTACAGATGGGATTCCACAGTGGGGTGGGTGG...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 72 bp TGCTTTGAGGGATGGGTCAGTGGAGGCCTGTTGTATTaGAAGACAAAAGGCCTATCACAGTCTTGCCTAATG +
Preference number: 4 (lower is better)
Translates to: CFEGWVSGGLLY*KTKGLSQSCLM
Trigger: CATTAGGCAAGACTGTGATAGGCCTTTTGTCTTCAAATACAACAGGCCTCCACTGACCCATCCCTCAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 72 bp TACTTGTCATCCTTCAGGTCATCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATGGGCTGTGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: YLSSFRSSGMKT*RAFLIMGCGFS
Trigger: ACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAAGGATGACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR TCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGAGGGAATGCCATTTTCTaGCAAAAACTCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGGNAIF*QKLLQV
Trigger: GACCTGGAGGAGTTTTTGTCAGAAAATGGCATTCCC...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTGCATTGCTGATGGATTaGCGAGGAGACCACCAGATC +
Preference number: 4 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSALLMD*RGDHQI
Trigger: GATCTGGTGGTCTCCTCGTCAATCCATCAGCAATGC...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR GCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTTTTCCTCCGTCCTTTaGCAAAAGTACTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWFSSVL*QKYSLS
Trigger: TGAGAGCGAGTACTTTTGGCAAAGGACGGAGGAAAA...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCCAGAGAACTTGCGTTTaGGAGGGTCAAACATTTCCT +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCQRTCV*EGQTFP
Trigger: AGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTG...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGAGTTCTTTCTGCGCCTTaGCCAGTACTTGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGVLSAP*PVLVIL
Trigger: AAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAAC...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGGTATGTTCTTGCATTTaGCCAGCTCCTTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWVCSCI*PAPSSS
Trigger: ACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATAC...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCTCAGAAAGGTTGGTTTaGGTGTGGTGCTATCAGACA +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESSERLV*VWCYQT
Trigger: TGTCTGATAGCACCACACGCAAACCAACCTTTCTGA...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGGCACTGGCAGCAACGTaGCATTCCAGGAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQEALAAT*HSRNSE
Trigger: TTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGC...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCTACAAATGGTCTCTTTaGTACCGAGGTGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESYKWSL*YRGGNR
Trigger: TCTGTTCCCACCTCGGTAGCAAAGAGACCATTTGTA...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGTTTATCTTTACTAAATaGTGTCAAGTTACACCTCCC +
Preference number: 4 (lower is better)
Translates to: MARAKEHAHAHTADHTHEFIFTK*CQVTPP
Trigger: GGGAGGTGTAACTTGACAGCATTTAGTAAAGATAAA...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430986.6
CDS-3UTR GCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACAGTACTTGTCATCCTaGTTCAGGTCATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGQYLSS*FRSSGM
Trigger: CATCCCTGATGACCTGAAGCAGGATGACAAGTACTG...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572002.1
CDS-3UTR GCA 90 bp TACTTGGCAAGTATGTTCTTGCATTTGCCCAGCTCCTTCCTCAAGTCAGCCACCATCTTTACTAAATGCTaGAGAAGAAGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: YLASMFLHLPSSFLKSATIFTKC*RRRESW
Trigger: CCAGCTTTCCCTTCTTCTGCAGCATTTAGTAAAGAT...GGTGGCTGACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTCATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFHTVRR*DARVKG
Trigger: CCCCTTCACCCTGGCATCCCATCTCCGAACTGTATG...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTTCCTGAAGAGAAAGAAGTAATGATCTACAGCCCTCCCCTCAACAAACTACCTAGGATCAATGGGACTTaGTGTATTGCGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPEEKEVMIYSPPLNKLPRINGT*CIAVCW
Trigger: CCAGCAAACCGCAATACACCAAGTCCCATTGATCCT...AGGTAGTTTGTTGAGGGGAGGGCTGTAGATCATTACTTCTTTCTCTTCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGATGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGT +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGWCQDQ*DLVYCG
Trigger: ACCGCAATACACCAAGTCCCATTGATCCTGACACCA...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACCCACTGGGACCTGGATaGTGTCAGGATCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNPLGPG*CQDQWD
Trigger: GTCCCATTGATCCTGACACCATCCAGGTCCCAGTGG...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTCCACTGGGACCTGGATaGTGTCAGGATCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFPLGPG*CQDQWD
Trigger: GTCCCATTGATCCTGACACCATCCAGGTCCCAGTGG...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGGGGTCAAACATTTCCTaGCCAGGGATGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQEGSNIS*PGMLER
Trigger: CCTTTCCAGCATCCCTGGCCAGGAAATGTTTGACCC...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATTGTTATGTTTGGTAAGGCGTCGCGGGAGCGCTTaGCTGCCATGTTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RSLWCCQKDNGLLLCLVRRRGSA*LPCCSF
Trigger: GAAAGAACAACATGGCAGCCAAGCGCTCCCGCGACG...CCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCGCCTGGCCTCATACTTaGCAAGTATGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCAWPHT*QVCSCI
Trigger: AATGCAAGAACATACTTGCCAAGTATGAGGCCAGGC...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAATATCCTACTGGTTaGGTTTCCCAAGTCTATGAC +
Preference number: 4 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTKYPTG*VSQVYD
Trigger: GTCATAGACTTGGGAAACCCAACCAGTAGGATATTT...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CCA 90 bp AAAAATGACAAAGGGACTCTCATAATAGCTGCAGCGTGCAGACATGCGTCTGACTCTTTGCTACCGAGGTaGGAACAGAATACCATTGCT +
Preference number: 4 (lower is better)
Translates to: KNDKGTLIIAAACRHASDSLLPR*EQNTIA
Trigger: AGCAATGGTATTCTGTTCCCACCTCGGTAGCAAAGA...GTCAGACGCATGTCTGCACGCTGCAGCTATTATGAGAGTCCCTTTGTCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 72 bp GGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTaGTTGGAACTAAAAGACGATGAGAGGGCTACCTTA +
Preference number: 4 (lower is better)
Translates to: GLLSLVKTWHLS*LELKDDERATL
Trigger: TAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATCTTTGCGAGCTTTCTTaGTCATGGGCTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDLCELS*SWAVAS
Trigger: TGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAG...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCCTCAGAATTTCGAAGTaGACATTTTTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCLRISK*TFLWQM
Trigger: CATCTGCCACAAAAATGTTCACTTCGAAATTCTGAG...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATTGTTATGTTTGGTAAGGTGGCCTCCCGCTCCATaGAGCAGATCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RSLWCCQKDNGLLLCLVRWPPAP*SRSALF
Trigger: AAACAAGGCAGATCTGCTTCATGGAGCGGGAGGCCA...CCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATTGTTATGTTTGGTAAGGGGTCTGATGGGGCTCTaGATACAGTTCGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: RSLWCCQKDNGLLLCLVRGLMGL*IQFGDG
Trigger: CCCATCTCCGAACTGTATGCAGAGCCCCATCAGACC...CCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTTGGTGTATTGCGGTTTaGTGGCAACAGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFWCIAV*WQQLTW
Trigger: CCAGGTCAGCTGTTGCCAGCAAACCGCAATACACCA...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTTGGTGTATTGCGGTTTaGTGGCAACAGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFWCIAV*WQQLTW
Trigger: CCAGGTCAGCTGTTGCCAGCAAACCGCAATACACCA...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTTGGGACTTGGTGTATTaGGGTTTGCTGGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSWDLVY*GLLATA
Trigger: AGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCA...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR GCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATTGGGACTTGGTGTATTaGGGTTTGCTGGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDWDLVY*GLLATA
Trigger: AGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCA...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACAGAGAACTTGCGTTTaGGAGGGTCAAACATTTCCT +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGQRTCV*EGQTFP
Trigger: AGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTG...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACCCATGTTGTTCTTTCTaGGCCTTGCCCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: LELKDDERATLKWQEQRNPCCSF*ALPSTC
Trigger: ACAAGTACTGGGCAAGGCGCAGAAAGAACAACATGG...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGTGGCAAGTATGTTCTTaGATTTGCCCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WHLSLLELKDDERATLKWWQVCS*ICPAPS
Trigger: GGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCA...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACTGGCAAGTATGTTCTTaGATTTGCCCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LELKDDERATLKWQEQRNWQVCS*ICPAPS
Trigger: GGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCA...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGTACATTTGGAATTACTGTGAGTTCCCCACCAAACCAGTGGGTTAGAAGGAACTCAGAAAGGTTGGTTTaGGTGTGGTGCTATCAGACA +
Preference number: 4 (lower is better)
Translates to: CTFGITVSSPPNQWVRRNSERLV*VWCYQT
Trigger: TGTCTGATAGCACCACACGCAAACCAACCTTTCTGA...GTTCCTTCTAACCCACTGGTTTGGTGGGGAACTCACAGTAATTCCAAATGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGATCAGAAAGGTTGGTTTaGGTGTGGTGCTATCAGACA +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGSERLV*VWCYQT
Trigger: TGTCTGATAGCACCACACGCAAACCAACCTTTCTGA...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTGCACTGGCAGCAACGTaGCATTCCAGGAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFALAAT*HSRNSE
Trigger: TTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGC...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGTGTATTGCGGTTTGCTaGCAACAGCTGACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQECIAVC*QQLTWS
Trigger: AGACCAGGTCAGCTGTTGCCAGCAAACCGCAATACA...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACGGGTCAAACATTTCCTaGCCAGGGATGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNGSNIS*PGMLER
Trigger: CCTTTCCAGCATCCCTGGCCAGGAAATGTTTGACCC...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCRCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCAGAAGGAACCTCTGGGTaGTCTAGTACAGGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSEGTSG*SSTGFH
Trigger: ATGGAAACCTGTACTAGACCACCCAGAGGTTCCTTC...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 72 bp GACTATTGCCATCTAACAATTCTACAATTCGCCTCTTaGCCTGTAAAAAGGCCAACTCTACGTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: DYCHLTILQFAS*PVKRPTLRPPV
Trigger: CACAGGTGGACGTAGAGTTGGCCTTTTTACAGGCAAAGAGGCGAATTGTAGAATTGTTAGATGGCAATAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR TCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTCTTTGCGAGCTTTCTTaGTCATGGGCTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFLCELS*SWAVAS
Trigger: TGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAG...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTCTTTGCGAGCTTTCTTaGTCATGGGCTGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFLCELS*SWAVAS
Trigger: TGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAG...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGTCAGGTCATCAGGGATaGAGACTTTGCGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQESGHQG*RLCELS
Trigger: AGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGA...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LELKDDERATLKWQEQRNPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCAAACACCATCCCCTTCTaGGATACACCAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSNTIPF*DTPVSF
Trigger: AAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTT...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCAATTAACCACAGTTTGTaGCAACACCATCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSINHSL*QHHPLL
Trigger: CAGAAGGGGATGGTGTTGTCACAAACTGTGGTTAAT...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCAAAGCAGAAAACATGCTaGTGTGTCAGTGATAGGGCT +
Preference number: 4 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSKQKTC*CVSDRA
Trigger: AGCCCTATCACTGACACATCAGCATGTTTTCTGCTT...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGAAAGAAACAACAATGTaGCCTCATCAGGAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVKETTM*PHQEVL
Trigger: TAGGACCTCCTGATGAGGTCACATTGTTGTTTCTTT...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACCATTTGGAATTACTGTaGGTTCCCCACCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: LELKDDERATLKWQEQRNHLELL*VPHQTS
Trigger: ACTGGTTTGGTGGGGAACTCACAGTAATTCCAAATG...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCCAGACCCTAGACATCTaGTTGTACATTTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: LRSTILPGPFLVNPSRESQTLDI*LYIWNY
Trigger: GTAATTCCAAATGTACAATCAGATGTCTAGGGTCTG...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATGTTCTTTCTGCGCCTTaGCCAGTACTTGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDVLSAP*PVLVIL
Trigger: AAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAAC...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCCATGTTGTTCTTTCTaGGCCTTGCCCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQEPCCSF*ALPSTC
Trigger: ACAAGTACTGGGCAAGGCGCAGAAAGAACAACATGG...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATCCATGTTGTTCTTTCTaGGCCTTGCCCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDPCCSF*ALPSTC
Trigger: ACAAGTACTGGGCAAGGCGCAGAAAGAACAACATGG...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACGTATGTTCTTGCATTTaGCCAGCTCCTTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: LELKDDERATLKWQEQRNVCSCI*PAPSSS
Trigger: ACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATAC...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGTTGGTTTGCGTGTGGTaGTATCAGACAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVLVCVW*YQTGNK
Trigger: TTTGTTTCCTGTCTGATAGCACCACACGCAAACCAA...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGGGAATAGTCTGGCCATaGTCAAATGCATTACTTTAC +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWGIVWP*SNALLY
Trigger: GTAAAGTAATGCATTTGAGCATGGCCAGACTATTCC...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTCCTCCCATTTCCCTCTaGTTCCTTGTCCTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFPPISL*FLVLGN
Trigger: ATTCCCTAGGACAAGGAAGCAGAGGGAAATGGGAGG...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACCCTCCCATTTCCCTCTaGTTCCTTGTCCTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNPPISL*FLVLGN
Trigger: ATTCCCTAGGACAAGGAAGCAGAGGGAAATGGGAGG...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACGTTCTTTCTGCGCCTTaGCCAGTACTTGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNVLSAP*PVLVIL
Trigger: CAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAAC...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572002.1
CDS-3UTR GCA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGTTTATCTTTACTAAATaGTGCAGAAGAAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQFIFTK*CRRRES
Trigger: GCTTTCCCTTCTTCTGCAGCATTTAGTAAAGATAAA...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570962.1
ENST00000575345.5
CDS-3UTR CCA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTAGGATCAATGGGACTTaGTGTATTGCGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSRINGT*CIAVCW
Trigger: CCAGCAAACCGCAATACACCAAGTCCCATTGATCCT...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATTGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGT +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDWCQDQ*DLVYCG
Trigger: ACCGCAATACACCAAGTCCCATTGATCCTGACACCA...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACGCCTGGCCTCATACTTaGCAAGTATGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LELKDDERATLKWQEQRNAWPHT*QVCSCI
Trigger: AATGCAAGAACATACTTGCCAAGTATGAGGCCAGGC...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQERLVCV*CYQTGN
Trigger: GTTTCCTGTCTGATAGCACCACACGCAAACCAACCT...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTCCATTTTGTGCTTTTaGGTGACGTTAACTGACTTC +
Preference number: 4 (lower is better)
Translates to: CVYASGKVLMSERLVCVWSILCF*VTLTDF
Trigger: GAAGTCAGTTAACGTCACCCAAAAGCACAAAATGGA...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp AAGGTGCTCAAAATTAAAGACTTTATGTCGACTTATTCACACACATACACACACAACTGTCTGGGGCACTaGCAGCAACGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: KVLKIKDFMSTYSHTYTHNCLGH*QQRAIP
Trigger: TGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTT...GTGTGTGTATGTGTGTGAATAAGTCGACATAAAGTCTTTAATTTTGAGCACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGACTATTTCTCACGAATaGCAGGGTCCTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQETISHE*QGPSLA
Trigger: AGCCAGAGAAGGACCCTGCCATTCGTGAGAAATAGT...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570962.1
ENST00000575345.5
CDS-3UTR TCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACGGGAATGCCATTTTCTaGCAAAAACTCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNGNAIF*QKLLQV
Trigger: GACCTGGAGGAGTTTTTGTCAGAAAATGGCATTCCC...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACTCAGGTCATCAGGGATaGAGACTTTGCGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNSGHQG*RLCELS
Trigger: AGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGA...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTTCAGGTCATCAGGGATaGAGACTTTGCGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFSGHQG*RLCELS
Trigger: AGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGA...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGAACACCATCCCCTTCTaGGATACACCAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQENTIPF*DTPVSF
Trigger: AAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTT...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATCAGAGAACTTGCGTTTaGGAGGGTCAAACATTTCCT +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDQRTCV*EGQTFP
Trigger: AGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTG...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTCTTCCTCAGAGAACTTaGGTTTGCGAGGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFLPQRT*VCEGQT
Trigger: TGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAG...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTCCATGTTGTTCTTTCTaGGCCTTGCCCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFPCCSF*ALPSTC
Trigger: ACAAGTACTGGGCAAGGCGCAGAAAGAACAACATGG...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGGTATGTTCTTGCATTTaGCCAGCTCCTTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQEVCSCI*PAPSSS
Trigger: ACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATAC...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTGCACACACACACAGATaGACACCAAAATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFAHTHR*TPKWES
Trigger: TGACTCCCATTTTGGTGTGCATCTGTGTGTGTGTGC...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGTACACCCCCATCTCTTaGTGTTATCTACAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQEYTPIS*CYLQLV
Trigger: CACAAGCTGTAGATAACAGCAAGAGATGGGGGTGTA...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR GCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATACCTGTTTAACAGATaGGATCTTTGTGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSYLFNR*DLCGVA
Trigger: GGCAACACCACAAAGATCGCATCTGTTAAACAGGTA...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTTTATCTTTACTAAATaGTGCAGAAGAAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VYASGKVLMSERLVCVWCFIFTK*CRRRES
Trigger: GCTTTCCCTTCTTCTGCAGCATTTAGTAAAGATAAA...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570962.1
ENST00000575345.5
CDS-3UTR CCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACAGGATCAATGGGACTTaGTGTATTGCGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNRINGT*CIAVCW
Trigger: CCAGCAAACCGCAATACACCAAGTCCCATTGATCCT...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTTGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGT +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFWCQDQ*DLVYCG
Trigger: ACCGCAATACACCAAGTCCCATTGATCCTGACACCA...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTGCCTGGCCTCATACTTaGCAAGTATGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSAWPHT*QVCSCI
Trigger: AATGCAAGAACATACTTGCCAAGTATGAGGCCAGGC...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGGCCTGGCCTCATACTTaGCAAGTATGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQEAWPHT*QVCSCI
Trigger: AATGCAAGAACATACTTGCCAAGTATGAGGCCAGGC...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVRCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGATCCATTTTGTGCTTTTaGGTGACGTTAACTGACTTC +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGSILCF*VTLTDF
Trigger: GAAGTCAGTTAACGTCACCCAAAAGCACAAAATGGA...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGAAATGTGGTATTTGAATaGTTCAAAGTGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGNVVFE*FKVATS
Trigger: GGAAGTGGCCACTTTGAACCATTCAAATACCACATT...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 72 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAGAGGGCTACCTTAAAA +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSL*ELKDDERATLK
Trigger: TTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
3UTR CAA 72 bp CCTGTTGTATTTGAAGACAAAAGGCCTATCACAGTCTaGCCTAATGTGGTATTTGAATGGTTCAAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PVVFEDKRPITV*PNVVFEWFKVA
Trigger: GGCCACTTTGAACCATTCAAATACCACATTAGGCAAGACTGTGATAGGCCTTTTGTCTTCAAATACAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR TCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTCCTCTGGTAAAGTGCTaGTGTCAGAAAGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFPLVKC*CQKGWF
Trigger: AAACCAACCTTTCTGACATCAGCACTTTACCAGAGG...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATGGAACTAAAAGACGATaGGAGGGCTACCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDGTKRR*EGYLKM
Trigger: CATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCC...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACAAGCAGAAAACATGCTaGTGTGTCAGTGATAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNKQKTC*CVSDRA
Trigger: AGCCCTATCACTGACACATCAGCATGTTTTCTGCTT...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTGTATGTTCTTGCATTTaGCCAGCTCCTTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFVCSCI*PAPSSS
Trigger: ACTTGAGGAAGGAGCTGGGCAAATGCAAGAACATAC...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp AAGGTGCTCAAAATTAAAGACTTTATGTCGACTTATTCACACACATACACACACTGTTTGCTAGTTAACTaGCCTGGATGGAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KVLKIKDFMSTYSHTYTHCLLVN*PGWRGS
Trigger: GCTGCCTCTCCATCCAGGGCAGTTAACTAGCAAACA...GTGTGTGTATGTGTGTGAATAAGTCGACATAAAGTCTTTAATTTTGAGCACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTGCCTGGCCTCATACTTaGCAAGTATGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFAWPHT*QVCSCI
Trigger: AATGCAAGAACATACTTGCCAAGTATGAGGCCAGGC...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACGCCTGGCCTCATACTTaGCAAGTATGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNAWPHT*QVCSCI
Trigger: AATGCAAGAACATACTTGCCAAGTATGAGGCCAGGC...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR TCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACGGAACTAAAAGACGATaGGAGGGCTACCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNGTKRR*EGYLKM
Trigger: CATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCC...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CACACTCTGTGTTCTATTAATAGTACTCTTACTTATCTGGGGTTGGTAGAATTACTTCCTCAGAGAACTTaGGTTTGCGAGGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: HTLCSINSTLTYLGLVELLPQRT*VCEGQT
Trigger: TGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAG...TAATTCTACCAACCCCAGATAAGTAAGAGTACTATTAATAGAACACAGAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACTTGGTTTGCGTGTGGTaGTATCAGACAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNLVCVW*YQTGNK
Trigger: TTTGTTTCCTGTCTGATAGCACCACACGCAAACCAA...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTGGCCATGCTCAAATaGATTACTTTACTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGLAMLK*ITLLFV
Trigger: AACAAAAAGTAAAGTAATGCATTTGAGCATGGCCAG...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATGGAATAGTCTGGCCATaGTCAAATGCATTACTTTAC +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDGIVWP*SNALLY
Trigger: GTAAAGTAATGCATTTGAGCATGGCCAGACTATTCC...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGAGGCTGGTCAATTTTTaGCTTTCTTTGCCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: LSLLELKDDERATLKWQERLVNF*LSLPSL
Trigger: TAGACTTGGCAAAGAAAGGCAAAAATTGACCAGCCT...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATATCTTTACTAAATGCTaGAGAAGAAGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDIFTKC*RRRESW
Trigger: CCAGCTTTCCCTTCTTCTGCAGCATTTAGTAAAGAT...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570962.1
ENST00000575345.5
CDS-3UTR CCA 90 bp CACACTCTGTGTTCTATTAATAGTACTCTTACTTATCTGGGGTTGGTAGAATTAAGGTTGGTTTGCGTGTaGTGCTATCAGACAGGAAAC +
Preference number: 4 (lower is better)
Translates to: HTLCSINSTLTYLGLVELRLVCV*CYQTGN
Trigger: GTTTCCTGTCTGATAGCACCACACGCAAACCAACCT...TAATTCTACCAACCCCAGATAAGTAAGAGTACTATTAATAGAACACAGAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATAGATGCACACCAAAATaGGAGTCAGTTGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDRCTPK*ESVVFM
Trigger: CATAAACACAACTGACTCCCATTTTGGTGTGCATCT...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CCA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATGTAGAAATATCCTACTaGTTGGGTTTCCCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDVEISY*LGFPSL
Trigger: TAGACTTGGGAAACCCAACCAGTAGGATATTTCTAC...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CCA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAGTCTTGCCTAATGTaGTATTTGAATGGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: WHLSLLELKDDERATLKWQSCLM*YLNGSK
Trigger: CTTTGAACCATTCAAATACCACATTAGGCAAGACTG...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
3UTR CAA 72 bp ACACACACTCTTACACTTAGCCTCCTGCAAAATGTATaGACTTTAGTTGCTATATCCGATTCGGATAAGGCT +
Preference number: 4 (lower is better)
Translates to: THTLTLSLLQNV*TLVAISDSDKA
Trigger: AGCCTTATCCGAATCGGATATAGCAACTAAAGTCAATACATTTTGCAGGAGGCTAAGTGTAAGAGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCACTGGCCATGCTCAAATaGATTACTTTACTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSLAMLK*ITLLFV
Trigger: AACAAAAAGTAAAGTAATGCATTTGAGCATGGCCAG...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTGGAATAGTCTGGCCATaGTCAAATGCATTACTTTAC +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFGIVWP*SNALLY
Trigger: GTAAAGTAATGCATTTGAGCATGGCCAGACTATTCC...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR GCA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACTTTATCTTTACTAAATaGAAGAAAGGGCTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LELKDDERATLKWQEQRNFIFTK*KKGLKP
Trigger: TGGCTTGAGCCCTTTCTTGCATTTAGTAAAGATAAA...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573945.5
CDS-3UTR TCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACCAGCTTGTGACAAAATaGACACCTTGTAGAAATATC +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNQLVTK*TPCRNI
Trigger: GATATTTCTACAAGGTGTTCATTTTGTCACAAGCTG...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR TCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTGTTATCTACAGCTTGTaGCAAAATGAACACCTTGTA +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFVIYSL*QNEHLV
Trigger: TACAAGGTGTTCATTTTGTCACAAGCTGTAGATAAC...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR TCA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACTTTTCAGCTACCATTTaGTACGGCCATAAATTTGGA +
Preference number: 4 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNFSATI*YGHKFG
Trigger: TCCAAATTTATGGCCGTATCAAATGGTAGCTGAAAA...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR TCA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTTTTTCAGCTACCATTTaGTACGGCCATAAATTTGGA +
Preference number: 4 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFFSATI*YGHKFG
Trigger: TCCAAATTTATGGCCGTATCAAATGGTAGCTGAAAA...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR GCA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTCGATCTTTGTGGTGTTaGCAAAAGGATAATGGATTA +
Preference number: 4 (lower is better)
Translates to: QELVLLKTEIHYFTRALFRSLWC*QKDNGL
Trigger: TAATCCATTATCCTTTTGGCAACACCACAAAGATCG...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CCA 90 bp CACACTCTGTGTTCTATTAATAGTACTCTTACTTATCTGGGGTTGGTAGAATTATCCATTTTGTGCTTTTaGGTGACGTTAACTGACTTC +
Preference number: 4 (lower is better)
Translates to: HTLCSINSTLTYLGLVELSILCF*VTLTDF
Trigger: GAAGTCAGTTAACGTCACCCAAAAGCACAAAATGGA...TAATTCTACCAACCCCAGATAAGTAAGAGTACTATTAATAGAACACAGAGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
3UTR CAA 72 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATaGTTATGTTTGGTAAGGTGCTCAAAATTAAAGACT +
Preference number: 4 (lower is better)
Translates to: RSLWCCQKDNGL*LCLVRCSKLKT
Trigger: AGTCTTTAATTTTGAGCACCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR GCA 90 bp CACACTCTGTGTTCTATTAATAGTACTCTTACTTATCTGGGGTTGGTAGAATTACTGGCCATGCTCAAATaGATTACTTTACTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: HTLCSINSTLTYLGLVELLAMLK*ITLLFV
Trigger: AACAAAAAGTAAAGTAATGCATTTGAGCATGGCCAG...TAATTCTACCAACCCCAGATAAGTAAGAGTACTATTAATAGAACACAGAGTGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS GCA 90 bp ACTTTCGGGTTTCCAGTGCAGACGGTCCCAGGAGAGCGCGCCAAGTaGCCGCGGGCTCCCCGGCGACGTGCAGGATGCTCTCACCTGCCT +
Preference number: 5 (lower is better)
Translates to: TFGFPVQTVPGERAK*PRAPRRRAGCSHLP
Trigger: AGGCAGGTGAGAGCATCCTGCACGTCGCCGGGGAGCCCGCGGGCACTTGGCGCGCTCTCCTGGGACCGTCTGCACTGGAAACCCGAAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS TCA 90 bp GGTCTGATGGGGCTCTGCATACAGTTCGGAGATGGGATGCCAGGGTaGAGGGGTGCAGAGGCCCGGCTGCTGAGGTCCATGACCGAGGGG +
Preference number: 5 (lower is better)
Translates to: GLMGLCIQFGDGMPG*RGAEARLLRSMTEG
Trigger: CCCCTCGGTCATGGACCTCAGCAGCCGGGCCTCTGCACCCCTTCACCCTGGCATCCCATCTCCGAACTGTATGCAGAGCCCCATCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS TCA 90 bp GCAAGAAAGGGCTCAAGCCAGAGGAGGCTCCTGCGCGGTTACACGTaGGCCTGCTCCGCTCTCCCCTCCCACCAGAAAAAGTGCACCGGG +
Preference number: 5 (lower is better)
Translates to: ARKGSSQRRLLRGYT*ACSALPSHQKKCTG
Trigger: CCCGGTGCACTTTTTCTGGTGGGAGGGGAGAGCGGAGCAGGCTCACGTGTAACCGCGCAGGAGCCTCCTCTGGCTTGAGCCCTTTCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573945.5
CDS CCA 90 bp GCTGGCAACAGCTGGTCTGATGGGGCTCTGCATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGGTGCAGAGGCCCGGCTGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: AGNSWSDGALHTVRR*DARVKGCRGPAAEV
Trigger: GACCTCAGCAGCCGGGCCTCTGCACCCCTTCACCCTGGCATCCCATCTCCGAACTGTATGCAGAGCCCCATCAGACCAGCTGTTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS CCA 90 bp CAACAGCTGACCTGGTCTGATGGGGCTCTGCATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGGTGCAGAGGCCCGGCTGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: QQLTWSDGALHTVRR*DARVKGCRGPAAEV
Trigger: GACCTCAGCAGCCGGGCCTCTGCACCCCTTCACCCTGGCATCCCATCTCCGAACTGTATGCAGAGCCCCATCAGACCAGGTCAGCTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACGCGTCGCGGGAGCGCTaGGCTGCCATGTTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHASRER*AAMLFF
Trigger: AAAGAACAACATGGCAGCCAAGCGCTCCCGCGACGC...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS CCA 90 bp GGTCTGGCTCATAACCCACTGGGACCTGGATGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGTTTGCTGGCAACAGCTGACCAGGGC +
Preference number: 5 (lower is better)
Translates to: GLAHNPLGPGWCQDQ*DLVYCGLLATADQG
Trigger: GCCCTGGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573422.5
CDS-3UTR CAA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCTCTTCCTCAGAGAACTaGCGTTTGCGAGGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: GPQGRKELSGALAATCHSSSSEN*RLRGSN
Trigger: GTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGA...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS CCA 90 bp GGTCTGGCTCATAACCCACTGGGACCTGGATGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGTTTGCTGGCAACAGCTGACCTGGTC +
Preference number: 5 (lower is better)
Translates to: GLAHNPLGPGWCQDQ*DLVYCGLLATADLV
Trigger: GACCAGGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS CCA 90 bp GGGCAAGATCTGCTGGGTCTGGCTCATAACCCACTGGGACCTGGATaGTGTCAGGATCAATGGGACTTGGTGTATTGCGGTTTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GQDLLGLAHNPLGPG*CQDQWDLVYCGLLA
Trigger: TGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCAGACCCAGCAGATCTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573020.1
ENST00000573422.5
ENST00000573945.5
ENST00000575345.5
ENST00000575868.3
CDS-3UTR CAA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCGCTTGGCTGCCATGTaGTTCTTTCTGCGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: MARAKEHAHAHTADHTHERLAAM*FFLRLA
Trigger: GGCAAGGCGCAGAAAGAACAACATGGCAGCCAAGCG...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACACGCTTGGCTGCCATGTaGTTCTTTCTGCGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTRLAAM*FFLRLA
Trigger: GGCAAGGCGCAGAAAGAACAACATGGCAGCCAAGCG...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCAAGTATGTTCTTGCATTaGCCCAGCTCCTTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: GRGWETRERAPQSSKDMASMFLH*PSSFLK
Trigger: CTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACT...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGTATGTTCTTGCATTaGCCCAGCTCCTTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: GPQGRKELSGALAATCHSSMFLH*PSSFLK
Trigger: CTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACT...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCCTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: GPQGRKELSGALAATCHSLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS CCA 90 bp GGTCTGGCTCATAACCCACTGGGACCTGGATGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGTTTGCTGGCAACAGCTGACCCAGTT +
Preference number: 5 (lower is better)
Translates to: GLAHNPLGPGWCQDQ*DLVYCGLLATADPV
Trigger: AACTGGGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS CCA 90 bp GGTCTGGCTCATAACCCACTGGGACCTGGATGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGTTTGCTGGCAACAGCTGGTCTGATG +
Preference number: 5 (lower is better)
Translates to: GLAHNPLGPGWCQDQ*DLVYCGLLATAGLM
Trigger: CATCAGACCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS CCA 90 bp GGTCTGGCTCATAACCCACTGGGACCTGGATGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGTTTGCTGGCAACAGCTGACGTGTTG +
Preference number: 5 (lower is better)
Translates to: GLAHNPLGPGWCQDQ*DLVYCGLLATADVL
Trigger: CAACACGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573020.1
CDS-3UTR CAA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACATGGGACTTGGTGTATaGCGGTTTGCTGGCAACAGC +
Preference number: 5 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHMGLGV*RFAGNS
Trigger: GCTGTTGCCAGCAAACCGCAATACACCAAGTCCCAT...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCATCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATG +
Preference number: 5 (lower is better)
Translates to: GRGWETRERAPQSSKDMASGMKT*RAFLIM
Trigger: CATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGA...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACCGCCTTGCCCAGTACTaGTCATCCTTCAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHRLAQY*SSFRSS
Trigger: TGATGACCTGAAGGATGACAAGTACTGGGCAAGGCG...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTGCGTCGCGGGAGCGCTaGGCTGCCATGTTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTASRER*AAMLFF
Trigger: AAAGAACAACATGGCAGCCAAGCGCTCCCGCGACGC...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGGCGTCGCGGGAGCGCTaGGCTGCCATGTTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQASRER*AAMLFF
Trigger: AAAGAACAACATGGCAGCCAAGCGCTCCCGCGACGC...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCCTACAATTCGCCTCTTaGCCTGTAAAAAGGCCAACT +
Preference number: 5 (lower is better)
Translates to: GPQGRKELSGALAATCHSLQFAS*PVKRPT
Trigger: AGTTGGCCTTTTTACAGGCAAAGAGGCGAATTGTAG...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACACGCCTTGCCCAGTACTaGTCATCCTGCTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTRLAQY*SSCFRS
Trigger: TGACCTGAAGCAGGATGACAAGTACTGGGCAAGGCG...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572002.1
CDS-3UTR CAA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGTTGGTGTATTGCGGTTaGCTGGCAACAGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: MARAKEHAHAHTADHTHELVYCG*LATADL
Trigger: CAGGTCAGCTGTTGCCAGCAAACCGCAATACACCAA...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACACGCCTTGCCCAGTACTaGTCATCCTTCAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTRLAQY*SSFRSS
Trigger: TGATGACCTGAAGGATGACAAGTACTGGGCAAGGCG...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGTCTTCCTCAGAGAACTaGCGTTTGCGAGGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: MARAKEHAHAHTADHTHESSSEN*RLRGSN
Trigger: GTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGA...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAACTTTGCGAGCTTTCTaGATCATGGGCTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTTLRAF*IMGCGF
Trigger: GAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGT...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCGCGTCGCGGGAGCGCTaGGCTGCCATGTTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LRSTILPGPFLVNPSRESASRER*AAMLFF
Trigger: AAAGAACAACATGGCAGCCAAGCGCTCCCGCGACGC...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCAGGAACTCAGAATTTCGAGTCAGAAAGGTTGGTTaGCGTGTGGTGCTATCAGAC +
Preference number: 5 (lower is better)
Translates to: ELSGALAATCHSRNSEFRVRKVG*RVVLSD
Trigger: GTCTGATAGCACCACACGCAAACCAACCTTTCTGAC...TCGAAATTCTGAGTTCCTGGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCAACATGGCACCTTTCTTaGTTGGAACTAAAAGACGAT +
Preference number: 5 (lower is better)
Translates to: GRGWETRERAPQSSKDMATWHLS*LELKDD
Trigger: ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGT...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GGCCCGCAGGGTAGAAAAGAACTGTCTGGGGCACTGGCAGCAACGTGCCATTCCTCCAAGACGCAGTTTTaGGCTCATGTACTGATAAAT +
Preference number: 5 (lower is better)
Translates to: GPQGRKELSGALAATCHSSKTQF*AHVLIN
Trigger: ATTTATCAGTACATGAGCCAAAAACTGCGTCTTGGA...GGAATGGCACGTTGCTGCCAGTGCCCCAGACAGTTCTTTTCTACCCTGCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTTTGGTGTATTGCGGTTaGCTGGCAACAGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTLVYCG*LATADL
Trigger: CAGGTCAGCTGTTGCCAGCAAACCGCAATACACCAA...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGATGGGACTTGGTGTATaGCGGTTTGCTGGCAACAGC +
Preference number: 5 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQMGLGV*RFAGNS
Trigger: GCTGTTGCCAGCAAACCGCAATACACCAAGTCCCAT...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGTCTTCCTCAGAGAACTaGCGTTTGCGAGGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMSSSEN*RLRGSN
Trigger: GTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGA...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTCGCCTTGCCCAGTACTaGTCATCCTTCAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTRLAQY*SSFRSS
Trigger: TGATGACCTGAAGGATGACAAGTACTGGGCAAGGCG...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGTGTTCTTTCTGCGCCTaGCCCAGTACTTGTCATCCT +
Preference number: 5 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMCSFCA*PSTCHP
Trigger: AGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACA...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCCGCTTGGCTGCCATGTaGTTCTTTCTGCGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCRLAAM*FFLRLA
Trigger: GGCAAGGCGCAGAAAGAACAACATGGCAGCCAAGCG...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGTATGTTCTTGCATTaGCCCAGCTCCTTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTSMFLH*PSSFLK
Trigger: CTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACT...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp ATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: MARAKEHAHAHTADHTHELMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...CTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GGGAGGGGATGGGAGACCCGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACTTACTTATCTGGGGTaGGTAGAATTAAAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: GRGWETRERAPQSSKDMALTYLG*VELKGN
Trigger: GTTTCCTTTTAATTCTACCAACCCCAGATAAGTAAG...TGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCGGGTCTCCCATCCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACGGAGGCCTGTTGTATTaGAAGACAAAAGGCCTATCA +
Preference number: 5 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHGGLLY*KTKGLS
Trigger: TGATAGGCCTTTTGTCTTCAAATACAACAGGCCTCC...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp AAGACTTTGCGAGCTTTCTTGATCATGGGCTGTGGCTTCAGTTCTTCCTCAGAGATGGGACTTGGTGTATaGCGGTTTGCTGGCAACAGC +
Preference number: 5 (lower is better)
Translates to: KTLRAFLIMGCGFSSSSEMGLGV*RFAGNS
Trigger: GCTGTTGCCAGCAAACCGCAATACACCAAGTCCCAT...CTCTGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTCAGGATCAATGGGACTaGGTGTATTGCGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTQDQWD*VYCGLL
Trigger: CAGCAAACCGCAATACACCAAGTCCCATTGATCCTG...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTATCAGCAGGATCAATGGGACTaGGTGTATTGCGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: ASGKVLMSERLVCVWCYQQDQWD*VYCGLL
Trigger: CAGCAAACCGCAATACACCAAGTCCCATTGATCCTG...CTGATAGCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GCTTCAGTTCTTCCTCAGAGAACTTGCGTTTGCGAGGGTCAAACATTTCCTGGCTCTTCCTCAGAGAACTaGCGTTTGCGAGGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: ASVLPQRTCVCEGQTFPGSSSEN*RLRGSN
Trigger: GTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGA...GCCAGGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGAACTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CAA 90 bp CAGGTCATCAGGGATGAAGACTTTGCGAGCTTTCTTGATCATGGGCTGTGGCTTACTTTGCGAGCTTTCTaGATCATGGGCTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: QVIRDEDFASFLDHGLWLTLRAF*IMGCGF
Trigger: GAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGT...AAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTTGTTCTTTCTGCGCCTaGCCCAGTACTTGTCATCCT +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTCSFCA*PSTCHP
Trigger: AGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACA...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGGCGTCGCGGGAGCGCTaGGCTGCCATGTTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: WHLSLLELKDDERATLKWASRER*AAMLFF
Trigger: AAAGAACAACATGGCAGCCAAGCGCTCCCGCGACGC...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGTGCCTGGCCTCATACTaGGCAAGTATGTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMCLASY*ASMFLH
Trigger: ATGCAAGAACATACTTGCCAAGTATGAGGCCAGGCA...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTGTCAGAAAGGTTGGTTaGCGTGTGGTGCTATCAGAC +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTVRKVG*RVVLSD
Trigger: GTCTGATAGCACCACACGCAAACCAACCTTTCTGAC...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCTTGGTGTATTGCGGTTaGCTGGCAACAGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCLVYCG*LATADL
Trigger: CAGGTCAGCTGTTGCCAGCAAACCGCAATACACCAA...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTTCAGAGAACTTGCGTTaGCGAGGGTCAAACATTTCC +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTSENLR*RGSNIS
Trigger: GGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGA...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp AAATGGCAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGTCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATG +
Preference number: 5 (lower is better)
Translates to: KWQEQRNTHTHIPLTTHMSGMKT*RAFLIM
Trigger: CATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGA...CATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GTCATCCTTCAGGTCATCAGGGATGAAGACTTTGCGAGCTTTCTTGATCATGGGTGTTCTTTCTGCGCCTaGCCCAGTACTTGTCATCCT +
Preference number: 5 (lower is better)
Translates to: VILQVIRDEDFASFLDHGCSFCA*PSTCHP
Trigger: AGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACA...CCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAAGGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CAA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCACGCTTGGCTGCCATGTaGTTCTTTCTGCGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSRLAAM*FFLRLA
Trigger: GGCAAGGCGCAGAAAGAACAACATGGCAGCCAAGCG...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACCGCTTGGCTGCCATGTaGTTCTTTCTGCGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: LELKDDERATLKWQEQRNRLAAM*FFLRLA
Trigger: GGCAAGGCGCAGAAAGAACAACATGGCAGCCAAGCG...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCGTCAGAAAGGTTGGTTaGCGTGTGGTGCTATCAGAC +
Preference number: 5 (lower is better)
Translates to: VYASGKVLMSERLVCVWCVRKVG*RVVLSD
Trigger: GTCTGATAGCACCACACGCAAACCAACCTTTCTGAC...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTCTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCGCAGATCTGCCTTGTTaGCTAGTTAACTGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: VYASGKVLMSERLVCVWCADLPC*LVNCPG
Trigger: TCCAGGGCAGTTAACTAGCAAACAAGGCAGATCTGC...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACATTCACAGAATGTCTATaGTTTTACACTGGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTFTECL*FYTGGS
Trigger: ACTGCCCCCAGTGTAAAACAATAGACATTCTGTGAA...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGATGGGACTTGGTGTATaGCGGTTTGCTGGCAACAGC +
Preference number: 5 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVMGLGV*RFAGNS
Trigger: GCTGTTGCCAGCAAACCGCAATACACCAAGTCCCAT...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGCAGGATCAATGGGACTaGGTGTATTGCGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: CVYASGKVLMSERLVCVWQDQWD*VYCGLL
Trigger: CAGCAAACCGCAATACACCAAGTCCCATTGATCCTG...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp AAAAATGACAAAGGGACTCTCATAATAGCTGCAGCGTGCAGACATGCGTCTGACTCTTCCTCAGAGAACTaGCGTTTGCGAGGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: KNDKGTLIIAAACRHASDSSSEN*RLRGSN
Trigger: GTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGA...GTCAGACGCATGTCTGCACGCTGCAGCTATTATGAGAGTCCCTTTGTCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGACTTTGCGAGCTTTCTaGATCATGGGCTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: CVYASGKVLMSERLVCVWTLRAF*IMGCGF
Trigger: GAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGT...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GTTGTTCTTTCTGCGCCTTGCCCAGTACTTGTCATCCTTCAGGTCATCAGGGATTCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATG +
Preference number: 5 (lower is better)
Translates to: VVLSAPCPVLVILQVIRDSGMKT*RAFLIM
Trigger: CATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGA...ATCCCTGATGACCTGAAGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CAA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTGCGTCGCGGGAGCGCTaGGCTGCCATGTTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: QELVLLKTEIHYFTRALFASRER*AAMLFF
Trigger: AAAGAACAACATGGCAGCCAAGCGCTCCCGCGACGC...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCAGTATGTTCTTGCATTaGCCCAGCTCCTTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: VYASGKVLMSERLVCVWCSMFLH*PSSFLK
Trigger: CTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACT...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CAAGAGCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACATCCAAGACGCAGTTTTaGGCTCATGTACTGATAAAT +
Preference number: 5 (lower is better)
Translates to: QEQRNTHTHIPLTTHMSTSKTQF*AHVLIN
Trigger: ATTTATCAGTACATGAGCCAAAAACTGCGTCTTGGA...TGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GCAAAGGAACACGCACACGCACATACCGCTGACCACACACATGAGCACAAGCACAAACAAGAAAGCTCCTaGTGTATTTTAGAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: AKEHAHAHTADHTHEHKHKQESS*CILEQD
Trigger: ATCCTGCTCTAAAATACACAAGGAGCTTTCTTGTTT...GTGCTTGTGCTCATGTGTGTGGTCAGCGGTATGTGCGTGTGCGTGTTCCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAATCCAGATCTCCAATaGCCATCACACATAGGCAAG +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTNPDLQ*PSHIGK
Trigger: CTTGCCTATGTGTGATGGCAATTGGAGATCTGGATT...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGTTGGTGTATTGCGGTTaGCTGGCAACAGCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVLVYCG*LATAGL
Trigger: CAGACCAGCTGTTGCCAGCAAACCGCAATACACCAA...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS TCA 90 bp ATTTTGATTTCAAATATCAAGAATCGCAAGTATGGAGTGTACGGCTaGCTGCCTACCGAGGACGCAGTTTCCCTGGAATCTGCAGCCATG +
Preference number: 5 (lower is better)
Translates to: ILISNIKNRKYGVYG*LPTEDAVSLESAAM
Trigger: CATGGCTGCAGATTCCAGGGAAACTGCGTCCTCGGTAGGCAGTCAGCCGTACACTCCATACTTGCGATTCTTGATATTTGAAATCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS CCA 90 bp TGGCTGCACTTTGATTTTGATTTCAAATATCAAGAATCGCAAGTATaGAGTGTACGGCTGACTGCCTACCGAGGACGCAGTTTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: WLHFDFDFKYQESQV*SVRLTAYRGRSFPG
Trigger: TCCAGGGAAACTGCGTCCTCGGTAGGCAGTCAGCCGTACACTCCATACTTGCGATTCTTGATATTTGAAATCAAAATCAAAGTGCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS-3UTR CAA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTCAGAGAACTTGCGTTaGCGAGGGTCAAACATTTCC +
Preference number: 5 (lower is better)
Translates to: CVYASGKVLMSERLVCVWSENLR*RGSNIS
Trigger: GGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGA...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACCGCCTTGCCCAGTACTaGTCATCCTTCAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: LELKDDERATLKWQEQRNRLAQY*SSFRSS
Trigger: TGATGACCTGAAGGATGACAAGTACTGGGCAAGGCG...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGATGTTCTTTCTGCGCCTaGCCCAGTACTTGTCATCCT +
Preference number: 5 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGCSFCA*PSTCHP
Trigger: AGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACA...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCCTGGCCTCATACTaGGCAAGTATGTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: CVYASGKVLMSERLVCVWCLASY*ASMFLH
Trigger: ATGCAAGAACATACTTGCCAAGTATGAGGCCAGGCA...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGCCTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: HRCTPKWESVVFMPLVKCLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...GCACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTTCCTGAAGAGAAAGAAGTAATGATCTACAGCCCTCCCCTCAACAAACTACCTAGCATTGCTGATGGATaGACGAGGAGACCACCAGAT +
Preference number: 5 (lower is better)
Translates to: LPEEKEVMIYSPPLNKLPSIADG*TRRPPD
Trigger: ATCTGGTGGTCTCCTCGTCAATCCATCAGCAATGCT...AGGTAGTTTGTTGAGGGGAGGGCTGTAGATCATTACTTCTTTCTCTTCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCACTTTTCCTCCGTCCTTaGCCAAAAGTACTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSLFLRP*PKVLAL
Trigger: GAGAGCGAGTACTTTTGGCAAAGGACGGAGGAAAAG...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGTTGGTGTATTGCGGTTaGCTGGCAACAGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: LSLLELKDDERATLKWQELVYCG*LATADL
Trigger: CAGGTCAGCTGTTGCCAGCAAACCGCAATACACCAA...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTATGGGACTTGGTGTATaGCGGTTTGCTGGCAACAGC +
Preference number: 5 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSMGLGV*RFAGNS
Trigger: GCTGTTGCCAGCAAACCGCAATACACCAAGTCCCAT...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGTCTTCCTCAGAGAACTaGCGTTTGCGAGGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: WHLSLLELKDDERATLKWSSSEN*RLRGSN
Trigger: GTTTGACCCTCGCAAACGCAAGTTCTCTGAGGAAGA...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCTCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATG +
Preference number: 5 (lower is better)
Translates to: LRSTILPGPFLVNPSRESSGMKT*RAFLIM
Trigger: CATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGA...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCTGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAG +
Preference number: 5 (lower is better)
Translates to: VYASGKVLMSERLVCVWCWHLSL*ELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp AAGACTTTGCGAGCTTTCTTGATCATGGGCTGTGGCTTCAGTTCTTCCTCAGAGTGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAG +
Preference number: 5 (lower is better)
Translates to: KTLRAFLIMGCGFSSSSEWHLSL*ELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA...CTCTGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS-3UTR CAA 90 bp CTTCCTGAAGAGAAAGAAGTAATGATCTACAGCCCTCCCCTCAACAAACTACCTGTCAGTGGAGGCCTGTaGTATTTGAAGACAAAAGGC +
Preference number: 5 (lower is better)
Translates to: LPEEKEVMIYSPPLNKLPVSGGL*YLKTKG
Trigger: GCCTTTTGTCTTCAAATACAACAGGCCTCCACTGAC...AGGTAGTTTGTTGAGGGGAGGGCTGTAGATCATTACTTCTTTCTCTTCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACCTACAAATGGTCTCTTaGCTACCGAGGTGGGAACAG +
Preference number: 5 (lower is better)
Translates to: LELKDDERATLKWQEQRNLQMVS*LPRWEQ
Trigger: CTGTTCCCACCTCGGTAGCAAAGAGACCATTTGTAG...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAGGATCAATGGGACTaGGTGTATTGCGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LSLLELKDDERATLKWQEQDQWD*VYCGLL
Trigger: CAGCAAACCGCAATACACCAAGTCCCATTGATCCTG...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTCAGGATCAATGGGACTaGGTGTATTGCGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSQDQWD*VYCGLL
Trigger: CAGCAAACCGCAATACACCAAGTCCCATTGATCCTG...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGATCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATG +
Preference number: 5 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGSGMKT*RAFLIM
Trigger: CATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGA...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATTGTTCTTTCTGCGCCTaGCCCAGTACTTGTCATCCT +
Preference number: 5 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDCSFCA*PSTCHP
Trigger: AGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACA...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGAGTATGTTCTTGCATTaGCCCAGCTCCTTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: WHLSLLELKDDERATLKWSMFLH*PSSFLK
Trigger: CTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACT...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATGCCTGGCCTCATACTaGGCAAGTATGTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSCLASY*ASMFLH
Trigger: ATGCAAGAACATACTTGCCAAGTATGAGGCCAGGCA...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp GTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGTGCACATGGCACCTTTCTTaGTTGGAACTAAAAGACGAT +
Preference number: 5 (lower is better)
Translates to: VYASGKVLMSERLVCVWCTWHLS*LELKDD
Trigger: ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGT...GCACCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGCGAGAGGGCTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTCTTACTTATCTGGGGTaGGTAGAATTAAAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: RERAPQSSKDMAPFFVGTLTYLG*VELKGN
Trigger: GTTTCCTTTTAATTCTACCAACCCCAGATAAGTAAG...AGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAGCCCTCTCGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATAGCATTGCTGATGGATaGACGAGGAGACCACCAGAT +
Preference number: 5 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDSIADG*TRRPPD
Trigger: ATCTGGTGGTCTCCTCGTCAATCCATCAGCAATGCT...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp TGTACATTTGGAATTACTGTGAGTTCCCCACCAAACCAGTGGGTTAGAAGGAACCACCTGAACAATGTATaGCAATTCCAATACACCCCC +
Preference number: 5 (lower is better)
Translates to: CTFGITVSSPPNQWVRRNHLNNV*QFQYTP
Trigger: GGGGGTGTATTGGAATTGCAATACATTGTTCAGGTG...GTTCCTTCTAACCCACTGGTTTGGTGGGGAACTCACAGTAATTCCAAATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATTGTTATGTTTGGTAAGGAAGGGTCCTTCTGCTTaGAGGGATGGGTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: RSLWCCQKDNGLLLCLVRKGPSA*RDGSVE
Trigger: CTCCACTGACCCATCCCTCAAAGCAGAAGGACCCTT...CCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTCAGGATCAATGGGACTaGGTGTATTGCGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFQDQWD*VYCGLL
Trigger: CAGCAAACCGCAATACACCAAGTCCCATTGATCCTG...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATTCAGAGAACTTGCGTTaGCGAGGGTCAAACATTTCC +
Preference number: 5 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDSENLR*RGSNIS
Trigger: GGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGA...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGTCAGAGAACTTGCGTTaGCGAGGGTCAAACATTTCC +
Preference number: 5 (lower is better)
Translates to: LSLLELKDDERATLKWQESENLR*RGSNIS
Trigger: GGAAATGTTTGACCCTCGCAAACGCAAGTTCTCTGA...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTACTTTGCGAGCTTTCTaGATCATGGGCTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFTLRAF*IMGCGF
Trigger: GAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGT...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTACTTTGCGAGCTTTCTaGATCATGGGCTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: QELVLLKTEIHYFTRALFTLRAF*IMGCGF
Trigger: GAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGT...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGTCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATG +
Preference number: 5 (lower is better)
Translates to: WHLSLLELKDDERATLKWSGMKT*RAFLIM
Trigger: CATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGA...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTTGTTCTTTCTGCGCCTaGCCCAGTACTTGTCATCCT +
Preference number: 5 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFCSFCA*PSTCHP
Trigger: AGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACA...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TCACCTGAACAATGTATTGCAATTCCAATACACCCCCATCTCTTGCTGTTATCTAGTATGTTCTTGCATTaGCCCAGCTCCTTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: SPEQCIAIPIHPHLLLLSSMFLH*PSSFLK
Trigger: CTTGAGGAAGGAGCTGGGCAAATGCAAGAACATACT...AGATAACAGCAAGAGATGGGGGTGTATTGGAATTGCAATACATTGTTCAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATTGCCTGGCCTCATACTaGGCAAGTATGTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDCLASY*ASMFLH
Trigger: ATGCAAGAACATACTTGCCAAGTATGAGGCCAGGCA...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGTGCCTGGCCTCATACTaGGCAAGTATGTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: LSLLELKDDERATLKWQECLASY*ASMFLH
Trigger: ATGCAAGAACATACTTGCCAAGTATGAGGCCAGGCA...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGTGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAG +
Preference number: 5 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVWHLSL*ELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCAAAGGAACATACACCCCCATCTCTaGCTGTTATCTACAGCTTGT +
Preference number: 5 (lower is better)
Translates to: LELKDDERATLKWQEQRNIHPHL*LLSTAC
Trigger: ACAAGCTGTAGATAACAGCAAGAGATGGGGGTGTAT...GTTCCTTTGCTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCGATACGGCCATAAATTaGGATGGTCCATGTTACAAT +
Preference number: 5 (lower is better)
Translates to: LRSTILPGPFLVNPSRESDTAIN*DGPCYN
Trigger: ATTGTAACATGGACCATCCAAATTTATGGCCGTATC...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp CACACTCTGTGTTCTATTAATAGTACTCTTACTTATCTGGGGTTGGTAGAATTACGCCTTGCCCAGTACTaGTCATCCTTCAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: HTLCSINSTLTYLGLVELRLAQY*SSFRSS
Trigger: TGATGACCTGAAGGATGACAAGTACTGGGCAAGGCG...TAATTCTACCAACCCCAGATAAGTAAGAGTACTATTAATAGAACACAGAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGTGTTTATGCCTCTGGTAAAGTGCTGATGTCAGAAAGGTTGGTTTGCGTGTGGAAACAAGAAAGCTCCTaGTGTATTTTAGAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: CVYASGKVLMSERLVCVWKQESS*CILEQD
Trigger: ATCCTGCTCTAAAATACACAAGGAGCTTTCTTGTTT...CCACACGCAAACCAACCTTTCTGACATCAGCACTTTACCAGAGGCATAAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGCAAGAGCACCTGAACAATGTATaGCAATTCCAATACACCCCC +
Preference number: 5 (lower is better)
Translates to: LSLLELKDDERATLKWQEHLNNV*QFQYTP
Trigger: GGGGGTGTATTGGAATTGCAATACATTGTTCAGGTG...CTCTTGCCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp ACACAGATGCACACCAAAATGGGAGTCAGTTGTGTTTATGCCTCTGGTAAAGTGGATACGGCCATAAATTaGGATGGTCCATGTTACAAT +
Preference number: 5 (lower is better)
Translates to: TQMHTKMGVSCVYASGKVDTAIN*DGPCYN
Trigger: ATTGTAACATGGACCATCCAAATTTATGGCCGTATC...CACTTTACCAGAGGCATAAACACAACTGACTCCCATTTTGGTGTGCATCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp CTGAGATCCACTATTTTACCAGGGCCCTTTTTAGTGAATCCAAGCAGAGAGTCCCTCCTGCAAAATGTATaGACTTTAGTTGCTATATCC +
Preference number: 5 (lower is better)
Translates to: LRSTILPGPFLVNPSRESLLQNV*TLVAIS
Trigger: GGATATAGCAACTAAAGTCAATACATTTTGCAGGAG...GGACTCTCTGCTTGGATTCACTAAAAAGGGCCCTGGTAAAATAGTGGATCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATTGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAG +
Preference number: 5 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDWHLSL*ELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGGCACCTTTCTTTGTTGGAACTAAAAGACGATGAGAGGGCTACCTTAAAATGGACATGGCACCTTTCTTaGTTGGAACTAAAAGACGAT +
Preference number: 5 (lower is better)
Translates to: WHLSLLELKDDERATLKWTWHLS*LELKDD
Trigger: ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGT...CCATTTTAAGGTAGCCCTCTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CAGTTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATCCAAGACGCAGTTTTaGGCTCATGTACTGATAAAT +
Preference number: 5 (lower is better)
Translates to: QFVTTPSPSEIHQCLLHSSKTQF*AHVLIN
Trigger: ATTTATCAGTACATGAGCCAAAAACTGCGTCTTGGA...TGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TGCGGAGTAGTGCTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGAAAACAAGAAAGCTCCTaGTGTATTTTAGAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: CGVVLSYCVHLISMVTYGKQESS*CILEQD
Trigger: ATCCTGCTCTAAAATACACAAGGAGCTTTCTTGTTT...TCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAGCACTACTCCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp TTTGTGACAACACCATCCCCTTCTGAGATACACCAGTGTCTTTTACATTCATTTATACACCCCCATCTCTaGCTGTTATCTACAGCTTGT +
Preference number: 5 (lower is better)
Translates to: FVTTPSPSEIHQCLLHSFIHPHL*LLSTAC
Trigger: ACAAGCTGTAGATAACAGCAAGAGATGGGGGTGTAT...AAATGAATGTAAAAGACACTGGTGTATCTCAGAAGGGGATGGTGTTGTCACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226067.10
ENST00000575345.5
CDS-3UTR CAA 90 bp CACACTCTGTGTTCTATTAATAGTACTCTTACTTATCTGGGGTTGGTAGAATTACTGATGTCAGAAAGGTaGGTTTGCGTGTGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: HTLCSINSTLTYLGLVELLMSER*VCVWCY
Trigger: ATAGCACCACACGCAAACCAACCTTTCTGACATCAG...TAATTCTACCAACCCCAGATAAGTAAGAGTACTATTAATAGAACACAGAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTAAGTTATTGTGTGCACCTCATTAGCATGGTAACTTACGGACTAAACAGAAACTGGCACCTTTCTTTGTaGGAACTAAAAGACGATGAG +
Preference number: 5 (lower is better)
Translates to: LSYCVHLISMVTYGLNRNWHLSL*ELKDDE
Trigger: CTCATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCA...GTTTCTGTTTAGTCCGTAAGTTACCATGCTAATGAGGTGCACACAATAACTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CTCCTCAGTCTAGTAAAGACATGGCACCTTTCTTTGTTGGAACTAAAAGACGATACATGGCACCTTTCTTaGTTGGAACTAAAAGACGAT +
Preference number: 5 (lower is better)
Translates to: LLSLVKTWHLSLLELKDDTWHLS*LELKDD
Trigger: ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGT...ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGTCTTTACTAGACTGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATTGTTATGTTTGGTAAGGCTACAATTCGCCTCTTaGCCTGTAAAAAGGCCAACT +
Preference number: 5 (lower is better)
Translates to: RSLWCCQKDNGLLLCLVRLQFAS*PVKRPT
Trigger: AGTTGGCCTTTTTACAGGCAAAGAGGCGAATTGTAG...CCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTACATGGCACCTTTCTTaGTTGGAACTAAAAGACGAT +
Preference number: 5 (lower is better)
Translates to: QELVLLKTEIHYFTRALFTWHLS*LELKDD
Trigger: ATCGTCTTTTAGTTCCAACAAAGAAAGGTGCCATGT...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS-3UTR CAA 90 bp CGATCTTTGTGGTGTTGCCAAAAGGATAATGGATTATTGTTATGTTTGGTAAGGAGGCCTATCACAGTCTaGCCTAATGTGGTATTTGAA +
Preference number: 5 (lower is better)
Translates to: RSLWCCQKDNGLLLCLVRRPITV*PNVVFE
Trigger: TTCAAATACCACATTAGGCAAGACTGTGATAGGCCT...CCTTACCAAACATAACAATAATCCATTATCCTTTTGGCAACACCACAAAGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS-3UTR CAA 90 bp CAAGAGCTTGTACTCTTAAAAACTGAGATCCACTATTTTACCAGGGCCCTTTTTCTTACTTATCTGGGGTaGGTAGAATTAAAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: QELVLLKTEIHYFTRALFLTYLG*VELKGN
Trigger: GTTTCCTTTTAATTCTACCAACCCCAGATAAGTAAG...AAAAAGGGCCCTGGTAAAATAGTGGATCTCAGTTTTTAAGAGTACAAGCTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000226067.10
ENST00000573945.5
ENST00000575345.5
CDS GCA 72 bp AGAGCGCGCCAAGTGCCCGCGGGCTCCCCGGCGACGTaGAGGATGCTCTCACCTGCCTCGAACCCCTCGTTT +
Preference number: 6 (lower is better)
Translates to: RARQVPAGSPAT*RMLSPASNPSF
Trigger: AAACGAGGGGTTCGAGGCAGGTGAGAGCATCCTGCACGTCGCCGGGGAGCCCGCGGGCACTTGGCGCGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS GCA 72 bp TTTCCAGTGCAGACGGTCCCAGGAGAGCGCGCCAAGTaGCCGCGGGCTCCCCGGCGACGTGCAGGATGCTCT +
Preference number: 6 (lower is better)
Translates to: FPVQTVPGERAK*PRAPRRRAGCS
Trigger: AGAGCATCCTGCACGTCGCCGGGGAGCCCGCGGGCACTTGGCGCGCTCTCCTGGGACCGTCTGCACTGGAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226067.10
CDS TCA 72 bp GGCTCAAGCCAGAGGAGGCTCCTGCGCGGTTACACGTaGGCCTGCTCCGCTCTCCCCTCCCACCAGAAAAAG +
Preference number: 6 (lower is better)
Translates to: GSSQRRLLRGYT*ACSALPSHQKK
Trigger: CTTTTTCTGGTGGGAGGGGAGAGCGGAGCAGGCTCACGTGTAACCGCGCAGGAGCCTCCTCTGGCTTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573945.5
CDS CCA 72 bp ACCTGGTCTGATGGGGCTCTGCATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGGTGCAGAGGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: TWSDGALHTVRR*DARVKGCRGPA
Trigger: AGCCGGGCCTCTGCACCCCTTCACCCTGGCATCCCATCTCCGAACTGTATGCAGAGCCCCATCAGACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS CCA 72 bp AGCTGGTCTGATGGGGCTCTGCATACAGTTCGGAGATaGGATGCCAGGGTGAAGGGGTGCAGAGGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: SWSDGALHTVRR*DARVKGCRGPA
Trigger: AGCCGGGCCTCTGCACCCCTTCACCCTGGCATCCCATCTCCGAACTGTATGCAGAGCCCCATCAGACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS GCA 72 bp GCCACAGGCAGCTTACCAGGGCCTGTGGTTTGTGGCTaGCTCTGCTGGATCAGTGGCACCTATGCCTGTGCT +
Preference number: 6 (lower is better)
Translates to: ATGSLPGPVVCG*LCWISGTYACA
Trigger: AGCACAGGCATAGGTGCCACTGATCCAGCAGAGGCAGCCACAAACCACAGGCCCTGGTAAGCTGCCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS CCA 72 bp CATGACCTCTGGCCACAGGCAGCTTACCAGGGCCTGTaGTTTGTGGCTGCCTCTGCTGGATCAGTGGCACCT +
Preference number: 6 (lower is better)
Translates to: HDLWPQAAYQGL*FVAASAGSVAP
Trigger: AGGTGCCACTGATCCAGCAGAGGCAGCCACAAACCACAGGCCCTGGTAAGCTGCCTGTGGCCAGAGGTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS GCA 72 bp CCTGGATGGTGTCAGGATCAATGGGACTTGGTGTATTaGGGTTTGCTGGCAACAGCTGACCAGGGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: PGWCQDQWDLVY*GLLATADQGLW
Trigger: CCACAGGCCCTGGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573422.5
CDS GCA 72 bp GGTGTCAGGATCAATGGGACTTGGTGTATTGCGGTTTaGTGGCAACAGCTGACCTGGTCTGATGGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: GVRINGTWCIAV*WQQLTWSDGAL
Trigger: CAGAGCCCCATCAGACCAGGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000572002.1
ENST00000573945.5
ENST00000575345.5
CDS GCA 72 bp CCTGGATGGTGTCAGGATCAATGGGACTTGGTGTATTaGGGTTTGCTGGCAACAGCTGGTCTGATGGGGCTC +
Preference number: 6 (lower is better)
Translates to: PGWCQDQWDLVY*GLLATAGLMGL
Trigger: GAGCCCCATCAGACCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS CCA 72 bp CTGCTGGGTCTGGCTCATAACCCACTGGGACCTGGATaGTGTCAGGATCAATGGGACTTGGTGTATTGCGGT +
Preference number: 6 (lower is better)
Translates to: LLGLAHNPLGPG*CQDQWDLVYCG
Trigger: ACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGGTCCCAGTGGGTTATGAGCCAGACCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573020.1
ENST00000573422.5
ENST00000573945.5
ENST00000575345.5
ENST00000575868.3
CDS CAA 90 bp GAGCGCTTGGCTGCCATGTTGTTCTTTCTGCGCCTTGCCCAGTACTaGTCATCCAGAATTCTTCTGGGTAGGAGGGAGGAGGCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: ERLAAMLFFLRLAQY*SSRILLGRREEAAL
Trigger: AAGAGCAGCCTCCTCCCTCCTACCCAGAAGAATTCTGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACAACATGGCAGCCAAGCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575307.1
CDS CAA 72 bp ACCTGGATGGTGTCAGGATCAATGGGACTTGGTGTATaGCGGTTTGCTGGCAACAGCTGGTCTGATGGGGCT +
Preference number: 6 (lower is better)
Translates to: TWMVSGSMGLGV*RFAGNSWSDGA
Trigger: AGCCCCATCAGACCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS CCA 72 bp CATAACCCACTGGGACCTGGATGGTGTCAGGATCAATaGGACTTGGTGTATTGCGGTTTGCTGGCAACAGCT +
Preference number: 6 (lower is better)
Translates to: HNPLGPGWCQDQ*DLVYCGLLATA
Trigger: AGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGGTCCCAGTGGGTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000226067.10
ENST00000430986.6
ENST00000570962.1
ENST00000572002.1
ENST00000573020.1
ENST00000573422.5
ENST00000573945.5
ENST00000575345.5
ENST00000575868.3
CDS CAA 72 bp TGGTGTCAGGATCAATGGGACTTGGTGTATTGCGGTTaGCTGGCAACAGCTGGTCTGATGGGGCTCTGCATA +
Preference number: 6 (lower is better)
Translates to: WCQDQWDLVYCG*LATAGLMGLCI
Trigger: TATGCAGAGCCCCATCAGACCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570962.1
CDS CAA 72 bp GCTGCCATGTTGTTCTTTCTGCGCCTTGCCCAGTACTaGTCATCCAGAATTCTTCTGGGTAGGAGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: AAMLFFLRLAQY*SSRILLGRREE
Trigger: CTCCTCCCTCCTACCCAGAAGAATTCTGGATGACAAGTACTGGGCAAGGCGCAGAAAGAACAACATGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575307.1
CDS GCA 72 bp ATATCAAGAATCGCAAGTATGGAGTGTACGGCTGACTaGCTACCGAGGACGCAGTTTCCCTGGAATCTGCAG +
Preference number: 6 (lower is better)
Translates to: ISRIASMECTAD*LPRTQFPWNLQ
Trigger: CTGCAGATTCCAGGGAAACTGCGTCCTCGGTAGGCAGTCAGCCGTACACTCCATACTTGCGATTCTTGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS CAA 90 bp GCCCAGTACTTGTCATCCTGCTTCAGGTCATCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATGGGCTGTGGCTTCAGTTCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: AQYLSSCFRSSGMKT*RAFLIMGCGFSSSS
Trigger: TGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAAGCAGGATGACAAGTACTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572002.1
CDS GCA 72 bp GGTGTCAGGATCAATGGGACTTGGTGTATTGCGGTTTaGTGGCAACAGCTGACGTGTTGGAATTACAGCTTC +
Preference number: 6 (lower is better)
Translates to: GVRINGTWCIAV*WQQLTCWNYSF
Trigger: GAAGCTGTAATTCCAACACGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573020.1
CDS GCA 72 bp CCTGGATGGTGTCAGGATCAATGGGACTTGGTGTATTaGGGTTTGCTGGCAACAGCTGACGTGTTGGAATTA +
Preference number: 6 (lower is better)
Translates to: PGWCQDQWDLVY*GLLATADVLEL
Trigger: TAATTCCAACACGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573020.1
CDS CAA 90 bp TCATCCTGCTTCAGGTCATCAGGGATGAAGACTTTGCGAGCTTTCTaGATCATGGGCTGTGGCTTCAGTTCTTCCTCAGAGAACTTGCGT +
Preference number: 6 (lower is better)
Translates to: SSCFRSSGMKTLRAF*IMGCGFSSSSENLR
Trigger: ACGCAAGTTCTCTGAGGAAGAACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAAGCAGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572002.1
CDS CAA 90 bp GCAAAGCACGTTCCACAGGTGTTGGAATTACAGCTTCCCTCCACCTaGCAATTCCTGTCTCGTGACCAAGGAGCTGAATCAATAGACTTC +
Preference number: 6 (lower is better)
Translates to: AKHVPQVLELQLPST*QFLSRDQGAESIDF
Trigger: GAAGTCTATTGATTCAGCTCCTTGGTCACGAGACAGGAATTGCAAGGTGGAGGGAAGCTGTAATTCCAACACCTGTGGAACGTGCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572234.2
CDS CAA 90 bp TTGCTGGCAACAGCTGACGTGTTGGAATTACAGCTTCCCTCCACCTaGCAATTCCTGTCTCGTGACCAAGGAGCTGAATCAATAGACTTC +
Preference number: 6 (lower is better)
Translates to: LLATADVLELQLPST*QFLSRDQGAESIDF
Trigger: GAAGTCTATTGATTCAGCTCCTTGGTCACGAGACAGGAATTGCAAGGTGGAGGGAAGCTGTAATTCCAACACGTCAGCTGTTGCCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573020.1
CDS TCA 72 bp TCAAATATCAAGAATCGCAAGTATGGAGTGTACGGCTaGCTGCCTACCGAGGACGCAGTTTCCCTGGAATCT +
Preference number: 6 (lower is better)
Translates to: SNIKNRKYGVYG*LPTEDAVSLES
Trigger: AGATTCCAGGGAAACTGCGTCCTCGGTAGGCAGTCAGCCGTACACTCCATACTTGCGATTCTTGATATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS TCA 72 bp AGAACCTGTGGGATGAGTTTTAAGAACTCTTACAGGTaGTCTGGGAACATGCAGGCTGGAGCTGCTGACTTC +
Preference number: 6 (lower is better)
Translates to: RTCGMSFKNSYR*SGNMQAGAADF
Trigger: GAAGTCAGCAGCTCCAGCCTGCATGTTCCCAGATCACCTGTAAGAGTTCTTAAAACTCATCCCACAGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS GCA 72 bp CCTGGATGGTGTCAGGATCAATGGGACTTGGTGTATTaGGGTTTGCTGGCAACAGCTGACCCAGTTAAAAAT +
Preference number: 6 (lower is better)
Translates to: PGWCQDQWDLVY*GLLATADPVKN
Trigger: ATTTTTAACTGGGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCATCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS CAA 72 bp TTGTCATCCTGCTTCAGGTCATCAGGGATGAAGACTTaGCGAGCTTTCTTGATCATGGGCTGTGGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LSSCFRSSGMKT*RAFLIMGCGFS
Trigger: ACTGAAGCCACAGCCCATGATCAAGAAAGCTCGCAAAGTCTTCATCCCTGATGACCTGAAGCAGGATGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572002.1
CDS CAA 72 bp TGGTGTCAGGATCAATGGGACTTGGTGTATTGCGGTTaGCTGGCAACAGCTGACGTGTTGGAATTACAGCTT +
Preference number: 6 (lower is better)
Translates to: WCQDQWDLVYCG*LATADVLELQL
Trigger: AAGCTGTAATTCCAACACGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573020.1
CDS GCA 72 bp GGTGTCAGGATCAATGGGACTTGGTGTATTGCGGTTTaGTGGCAACAGCTGACCCAGTTAAAAATCCCAATT +
Preference number: 6 (lower is better)
Translates to: GVRINGTWCIAV*WQQLTQLKIPI
Trigger: AATTGGGATTTTTAACTGGGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS CAA 72 bp TGGTGTCAGGATCAATGGGACTTGGTGTATTGCGGTTaGCTGGCAACAGCTGACCCAGTTAAAAATCCCAAT +
Preference number: 6 (lower is better)
Translates to: WCQDQWDLVYCG*LATADPVKNPN
Trigger: ATTGGGATTTTTAACTGGGTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575868.3
CDS CCA 72 bp ATAAGACTATTTCTCACGAATGGCAGGGTCCTTCTCTaGCTGCTGTCTTTTGTAGATCTAGAGTTAAAAGTT +
Preference number: 6 (lower is better)
Translates to: IRLFLTNGRVLL*LLSFVDLELKV
Trigger: AACTTTTAACTCTAGATCTACAAAAGACAGCAGCCAGAGAAGGACCCTGCCATTCGTGAGAAATAGTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575345.5
CDS CAA 72 bp CAAAGCTTCCTTAAAGAAAGTGGCTGCACTTTGATTTaGATTTCAAATATCAAGAATCGCAAGTATGGAGTG +
Preference number: 6 (lower is better)
Translates to: QSFLKESGCTLI*ISNIKNRKYGV
Trigger: CACTCCATACTTGCGATTCTTGATATTTGAAATCAAAATCAAAGTGCAGCCACTTTCTTTAAGGAAGCTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575868.3