Pregenerated sensors for HLCS-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000237646

Ensembl transcript IDs: ENST00000434195.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCCACCAATCCGCTTCCCCGGCCTGCATCCAGCTCTTCCCGTAGCTaGGGCTCAAATGATCTTCCACGGGGTCCATTAGTTCCTCTTGGC	+
Preference number: 5 (lower is better) Translates to: STNPLPRPASSSSRS*GSNDLPRGPLVPLG Trigger: GCCAAGAGGAACTAATGGACCCCGTGGAAGATCATTTGAGCCTCAGCTACGGGAAGAGCTGGATGCAGGCCGGGGAAGCGGATTGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434195.1
CDS TCA 90 bp	AAAATTCACAGTCACCTTTACAATGCTAAGCATTTCAACCTTAAATaGATGTGCAGTCCACCAATCCGCTTCCCCGGCCTGCATCCAGCT	+
Preference number: 5 (lower is better) Translates to: KIHSHLYNAKHFNLK*MCSPPIRFPGLHPA Trigger: AGCTGGATGCAGGCCGGGGAAGCGGATTGGTGGACTGCACATTCATTTAAGGTTGAAATGCTTAGCATTGTAAAGGTGACTGTGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434195.1
CDS TCA 72 bp	CCGCTTCCCCGGCCTGCATCCAGCTCTTCCCGTAGCTaGGGCTCAAATGATCTTCCACGGGGTCCATTAGTT	+
Preference number: 6 (lower is better) Translates to: PLPRPASSSSRS*GSNDLPRGPLV Trigger: AACTAATGGACCCCGTGGAAGATCATTTGAGCCTCAGCTACGGGAAGAGCTGGATGCAGGCCGGGGAAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434195.1
CDS CCA 72 bp	AATGATCTTCCACGGGGTCCATTAGTTCCTCTTGGCTaGTCCCTGGGTTCAATGCAACGCTCCCAGCAGGTA	+
Preference number: 6 (lower is better) Translates to: NDLPRGPLVPLG*SLGSMQRSQQV Trigger: TACCTGCTGGGAGCGTTGCATTGAACCCAGGGACCAGCCAAGAGGAACTAATGGACCCCGTGGAAGATCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434195.1
CDS CAA 72 bp	GTACTGACATGCTGCTCGAGTCCAGAGGTATCGCCATaGAGTTCAGCACAGTCAGGACCAGAGCCTTTTCCA	+
Preference number: 6 (lower is better) Translates to: VLTCCSSPEVSP*SSAQSGPEPFP Trigger: TGGAAAAGGCTCTGGTCCTGACTGTGCTGAACTCAATGGCGATACCTCTGGACTCGAGCAGCATGTCAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434195.1
CDS CAA 72 bp	CGGCCGTCATTGTCCAGGCCTCCCACATACAGAAACTaGGTAGACAGACATGTTCTGGGTCACATGGCTAAG	+
Preference number: 6 (lower is better) Translates to: RPSLSRPPTYRN*VDRHVLGHMAK Trigger: CTTAGCCATGTGACCCAGAACATGTCTGTCTACCAAGTTTCTGTATGTGGGAGGCCTGGACAATGACGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434195.1
CDS CAA 72 bp	AAGCTCTATTTAAGGAGAGGGAAATTGCGGCCGTCATaGTCCAGGCCTCCCACATACAGAAACTTGGTAGAC	+
Preference number: 6 (lower is better) Translates to: KLYLRRGKLRPS*SRPPTYRNLVD Trigger: GTCTACCAAGTTTCTGTATGTGGGAGGCCTGGACAATGACGGCCGCAATTTCCCTCTCCTTAAATAGAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434195.1
CDS CAA 90 bp	AAAAGAGGGATTCTTTCCCTGAAGCTCTATTTAAGGAGAGGGAAATaGCGGCCGTCATTGTCCAGGCCTCCCACATACAGAAACTTGGTA	+
Preference number: 6 (lower is better) Translates to: KRGILSLKLYLRRGK*RPSLSRPPTYRNLV Trigger: TACCAAGTTTCTGTATGTGGGAGGCCTGGACAATGACGGCCGCAATTTCCCTCTCCTTAAATAGAGCTTCAGGGAAAGAATCCCTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434195.1

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