RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HLCS (Homo sapiens)

Ensembl gene IDs: ENSG00000159267

Ensembl transcript IDs: ENST00000336648.8, ENST00000399120.5, ENST00000427746.1, ENST00000448340.5, ENST00000482273.1, ENST00000612277.4, ENST00000674895.2, ENST00000674895.3, ENST00000675057.1, ENST00000675307.1

Found 1152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCCGCGTCTCGGGGACGCCCGGCATTACCGCCGTTTGGGGAGGATaGGGTTTCTCAGCATGTCGAAGGAGTTGCCGTCCGGGTGCACAG +
Preference number: 1 (lower is better)
Translates to: SRVSGTPGITAVWGG*GFSACRRSCRPGAQ
Trigger: CTGTGCACCCGGACGGCAACTCCTTCGACATGCTGAGAAACCTCATCCTCCCCAAACGGCGGTAATGCCGGGCGTCCCCGAGACGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR TCA 90 bp GAGTTGCCGTCCGGGTGCACAGTCACAACCTCGCCGCCCTCCTGGTaGACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACC +
Preference number: 1 (lower is better)
Translates to: ELPSGCTVTTSPPSW*TWRKPESSRPTMDT
Trigger: GGTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACTGTGCACCCGGACGGCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR GCA 90 bp TGGAGAACGGAAGCCCACCCTGCCTCCCTTTTCCATCTGAAGCAGTaGGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAA +
Preference number: 1 (lower is better)
Translates to: WRTEAHPASLFHLKQ*GEAGSSLCSQTPGQ
Trigger: TTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGCTTCAGATGGAAAAGGGAGGCAGGGTGGGCTTCCGTTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR GCA 90 bp GAAGCCAGAATCGTCCAGGCCAACGATGGACACCTTTGGTCCCTCTaGGCTGCCCAGATGGACTTGCTGACCACTGTGGACCCAGTATCG +
Preference number: 1 (lower is better)
Translates to: EARIVQANDGHLWSL*AAQMDLLTTVDPVS
Trigger: CGATACTGGGTCCACAGTGGTCAGCAAGTCCATCTGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTTGGCCTGGACGATTCTGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR TCA 90 bp AACAGATCTGGAGAACGGAAGCCCACCCTGCCTCCCTTTTCCATCTaGAGCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTC +
Preference number: 1 (lower is better)
Translates to: NRSGERKPTLPPFSI*SSAGRLAPLFVPRL
Trigger: GAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGCTTCAGATGGAAAAGGGAGGCAGGGTGGGCTTCCGTTCTCCAGATCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR TCA 90 bp CTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTaGGGGAGGAGCGCCTGCTGGAAAGCACAGAGCACAGCAGTATGC +
Preference number: 1 (lower is better)
Translates to: LQGCFISLRTTESPA*GRSACWKAQSTAVC
Trigger: GCATACTGCTGTGCTCTGTGCTTTCCAGCAGGCGCTCCTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR TCA 90 bp AACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTaGGTCTCCTGCGTGAGGGAGGAGCGCCTGCTGGAAAGCACAGAG +
Preference number: 1 (lower is better)
Translates to: NAASASRLLHLSQDN*VSCVREERLLESTE
Trigger: CTCTGTGCTTTCCAGCAGGCGCTCCTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CCA 90 bp TCACAATTTGCAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTaGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCACTCAGCTA +
Preference number: 1 (lower is better)
Translates to: SQFANLGPWVMQRRG*MVGRDVPASPRTQL
Trigger: TAGCTGAGTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGCATGACCCACGGTCCTAAATTTGCAAATTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR GCA 90 bp CGCACCCCAGTCGGCCACTTGCTCTCACATCAGGCAACGTCAGCCTaGTGCAGTGAAACTCAACCACGATTTTCCTTTGCACACAAATCC +
Preference number: 1 (lower is better)
Translates to: RTPVGHLLSHQATSA*CSETQPRFSFAHKS
Trigger: GGATTTGTGTGCAAAGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR CCA 90 bp GAAAAGCCATTCCATTCATACCTTTGTAGAGCAGTGGGCTGGGTGTaGAGGGCAGCGCGGAGGGTATCTGCAAGAGCCTGTATTTTCCGC +
Preference number: 1 (lower is better)
Translates to: EKPFHSYLCRAVGWV*RAARRVSARACIFR
Trigger: GCGGAAAATACAGGCTCTTGCAGATACCCTCCGCGCTGCCCTCCACACCCAGCCCACTGCTCTACAAAGGTATGAATGGAATGGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR GCA 90 bp CCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTaGAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTGGATGGT +
Preference number: 1 (lower is better)
Translates to: PTGCLSVGLMVRVTI*KFRTVGHAAKGLDG
Trigger: ACCATCCAGCCCCTTCGCTGCATGACCCACGGTCCTAAATTTGCAAATTGTGACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR GCA 90 bp ACCCCAGTCGGCCACTTGCTCTCACATCAGGCAACGTCAGCCTGCTaGAGTGAAACTCAACCACGATTTTCCTTTGCACACAAATCCTTC +
Preference number: 1 (lower is better)
Translates to: TPVGHLLSHQATSAC*SETQPRFSFAHKSF
Trigger: GAAGGATTTGTGTGCAAAGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR CCA 90 bp TTTCTAGAAAAGCCATTCCATTCATACCTTTGTAGAGCAGTGGGCTaGGTGTGGAGGGCAGCGCGGAGGGTATCTGCAAGAGCCTGTATT +
Preference number: 1 (lower is better)
Translates to: FLEKPFHSYLCRAVG*VWRAARRVSARACI
Trigger: AATACAGGCTCTTGCAGATACCCTCCGCGCTGCCCTCCACACCCAGCCCACTGCTCTACAAAGGTATGAATGGAATGGCTTTTCTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR TCA 90 bp AGTCGGCCACTTGCTCTCACATCAGGCAACGTCAGCCTGCTGCAGTaGAACTCAACCACGATTTTCCTTTGCACACAAATCCTTCCTACT +
Preference number: 1 (lower is better)
Translates to: SRPLALTSGNVSLLQ*NSTTIFLCTQILPT
Trigger: AGTAGGAAGGATTTGTGTGCAAAGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAGCAAGTGGCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR TCA 90 bp TCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTAAGGATTCTGAACTTGATCCTGTCT +
Preference number: 1 (lower is better)
Translates to: SSPAVRAKSPTSSSK*CLIRHLRILNLILS
Trigger: AGACAGGATCAAGTTCAGAATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR GCA 90 bp TTGGTTCATGTGAGGCAAAATCAGGTTTATGGAAAACGCAGCATCTaGTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTG +
Preference number: 1 (lower is better)
Translates to: LVHVRQNQVYGKRSI*FKAASSLSGQLSLL
Trigger: CAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATTTTGCCTCACATGAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR GCA 90 bp ACAATTGAGCAGCTCAGCCTGTTGATGGCATCACACATTCCTCTCTaGCACATGGAAAAAGTTACAGTCTTGACTGTCAACTTCCTCCTT +
Preference number: 1 (lower is better)
Translates to: TIEQLSLLMASHIPL*HMEKVTVLTVNFLL
Trigger: AAGGAGGAAGTTGACAGTCAAGACTGTAACTTTTTCCATGTGGCAGAGAGGAATGTGTGATGCCATCAACAGGCTGAGCTGCTCAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR TCA 90 bp TGGCATCACACATTCCTCTCTGCCACATGGAAAAAGTTACAGTCTTaGCTGTCAACTTCCTCCTTCCTTGTCCTCATTTCAGATTTCGTG +
Preference number: 1 (lower is better)
Translates to: WHHTFLSATWKKLQS*LSTSSFLVLISDFV
Trigger: CACGAAATCTGAAATGAGGACAAGGAAGGAGGAAGTTGACAGTCAAGACTGTAACTTTTTCCATGTGGCAGAGAGGAATGTGTGATGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR TCA 90 bp ACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACAATTaGGCAGCTCAGCCTGTTGATGGCATCACACATTCCTCTCTGCCA +
Preference number: 1 (lower is better)
Translates to: TVSHIKSTAWTKTNN*AAQPVDGITHSSLP
Trigger: TGGCAGAGAGGAATGTGTGATGCCATCAACAGGCTGAGCTGCTCAATTGTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR TCA 90 bp TCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTaGACCGCCGTCCTTCAATTTTCTTCACACTATCAACACTGCAGC +
Preference number: 1 (lower is better)
Translates to: STWKNPVMALNCTMH*TAVLQFSSHYQHCS
Trigger: GCTGCAGTGTTGATAGTGTGAAGAAAATTGAAGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR GCA 90 bp ATGCCATGTCTTCTATATTCCGTGAGCTGCACAGTCTTGCAGGAATaGTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCA +
Preference number: 1 (lower is better)
Translates to: MPCLLYSVSCTVLQE*STFQSKSETGLKAP
Trigger: TGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATATAGAAGACATGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR TCA 90 bp AAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTaGCAAGGCCACACTTCATTAGTTTTAATTTGCAGAAAGGAAATT +
Preference number: 1 (lower is better)
Translates to: KAQSTAVCPEHLHSL*QGHTSLVLICRKEI
Trigger: AATTTCCTTTCTGCAAATTAAAACTAATGAAGTGTGGCCTTGTCAAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CCA 90 bp ATGATTCATAAGTTCAACAGAGATAGGAGGGACATGGAAAAGGCATaGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATT +
Preference number: 1 (lower is better)
Translates to: MIHKFNRDRRDMEKA*RTSGNSECISKGFI
Trigger: AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTCTGTTGAACTTATGAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CCA 90 bp GTGCTAATAAAGTTAAATTGCACGTGCAATACGGAACACTGTCAATaGACTGCACCTTGTGAAGGAAAAACATGCTTAAGGGGGTGTAAT +
Preference number: 1 (lower is better)
Translates to: VLIKLNCTCNTEHCQ*TAPCEGKTCLRGCN
Trigger: ATTACACCCCCTTAAGCATGTTTTTCCTTCACAAGGTGCAGTCCATTGACAGTGTTCCGTATTGCACGTGCAATTTAACTTTATTAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR CAA 90 bp ACGGACAGGCAGCCGCGTCTCGGGGACGCCCGGCATTACCGCCGTTaGGGGAGGATGAGGTTTCTCAGCATGTCGAAGGAGTTGCCGTCC +
Preference number: 2 (lower is better)
Translates to: TDRQPRLGDARHYRR*GRMRFLSMSKELPS
Trigger: GGACGGCAACTCCTTCGACATGCTGAGAAACCTCATCCTCCCCAAACGGCGGTAATGCCGGGCGTCCCCGAGACGCGGCTGCCTGTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR CCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGRFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp CCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGACACCTTTGGTCCCTCTaGGCTGCCCAGATGGACTTG +
Preference number: 2 (lower is better)
Translates to: PRRPPGEPGGSQNRPGQRHLWSL*AAQMDL
Trigger: CAAGTCCATCTGGGCAGCGCAGAGGGACCAAAGGTG...TCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR TCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCCTCTCTCAGGACAACTaGGTCTCCTGCGTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTLSQDN*VSCVRE
Trigger: CTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAG...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCCATAGGGCTGTCCTGTaGCTGGCTAAAGGTAGACAG +
Preference number: 2 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGHRAVL*LAKGRQ
Trigger: CTGTCTACCTTTAGCCAGGCACAGGACAGCCCTATG...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp CCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGACCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 2 (lower is better)
Translates to: PRRPPGEPGGSQNRPGQRPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...TCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR CCA 90 bp GCCCAATTCAAGGCTGGCTCAGCCCTCCACGGGGCCTCCCAGGGAAAGGAATTCACCTTTGTAGAGCAGTaGGCTGGGTGTGGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: AQFKAGSALHGASQGKEFTFVEQ*AGCGGQ
Trigger: CTGCCCTCCACACCCAGCCCACTGCTCTACAAAGGT...GAATTCCTTTCCCTGGGAGGCCCCGTGGAGGGCTGAGCCAGCCTTGAATTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR GCA 90 bp GCTGGGTGTGGAGGGCAGCGCGGAGGGTATCTGCAAGAGCCTGTATTTTCCGCCATGCTGTATATGCTGTaGCTTGGGGGACCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: AGCGGQRGGYLQEPVFSAMLYML*LGGPPE
Trigger: CTCTGGGGGTCCCCCAAGGCACAGCATATACAGCAT...GGCGGAAAATACAGGCTCTTGCAGATACCCTCCGCGCTGCCCTCCACACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCAACTCACCACTGGCCTaGGCGCAAGAGCATATTTTG +
Preference number: 2 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGNSPLA*AQEHIL
Trigger: CAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTT...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCTCTTTTAAAGCTATGTaGGCACACACGCACGCACAC +
Preference number: 2 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGSFKAM*AHTHAH
Trigger: GTGTGCGTGCGTGTGTGCGCACATAGCTTTAAAAGA...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp GCTGGGTGTGGAGGGCAGCGCGGAGGGTATCTGCAAGAGCCTGTATTTTCCGCCAACGGAAGCCCACCCTaGCTCCCTTTTCCATCTGAA +
Preference number: 2 (lower is better)
Translates to: AGCGGQRGGYLQEPVFSANGSPP*LPFPSE
Trigger: TTCAGATGGAAAAGGGAGGCAGGGTGGGCTTCCGTT...GGCGGAAAATACAGGCTCTTGCAGATACCCTCCGCGCTGCCCTCCACACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCAACCCGTTACCAGCCTaGAAGGGAGGATATCTTGCC +
Preference number: 2 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTNPLPA*KGGYLA
Trigger: GGCAAGATATCCTCCCTTCCAGGCTGGTAACGGGTT...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCGTCTTCTATATTCCGTaGGCTGCACAGTCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTVFYIP*AAQSCR
Trigger: CCTGCAAGACTGTGCAGCTCACGGAATATAGAAGAC...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp TTCAAGGCTGGCTCAGCCCTCCACGGGGCCTCCCAGGGAAAGGAATTCCTTTATAAGTCCTATCAGCCCTaGCTTCGTCCCTTCCGCCCT +
Preference number: 2 (lower is better)
Translates to: FKAGSALHGASQGKEFLYKSYQP*LRPFRP
Trigger: AGGGCGGAAGGGACGAAGGCAGGGCTGATAGGACTT...ATAAAGGAATTCCTTTCCCTGGGAGGCCCCGTGGAGGGCTGAGCCAGCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR TCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCGGAGAGCTCACTGAATaGTGTCAAAGTAATGAACTG +
Preference number: 2 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGGELTE*CQSNEL
Trigger: CAGTTCATTACTTTGACATCATTCAGTGAGCTCTCC...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGCTCTCTCAGGACAACTaGGTCTCCTGCGTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVLSQDN*VSCVRE
Trigger: CTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAG...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCGGAAAACGCAGCATCTaGTTCAAGGCTGCTTCATCT +
Preference number: 2 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTGKRSI*FKAASS
Trigger: AGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCC...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp GCTGGGTGTGGAGGGCAGCGCGGAGGGTATCTGCAAGAGCCTGTATTTTCCGCCGACATGGAAAAGGCATaGCGTACATCTGGGAATAGC +
Preference number: 2 (lower is better)
Translates to: AGCGGQRGGYLQEPVFSADMEKA*RTSGNS
Trigger: GCTATTCCCAGATGTACGCCATGCCTTTTCCATGTC...GGCGGAAAATACAGGCTCTTGCAGATACCCTCCGCGCTGCCCTCCACACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCAATTTCAGCTGGGACTaGAAGAGAGAAAACTGGACA +
Preference number: 2 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGNFSWD*KRENWT
Trigger: TGTCCAGTTTTCTCTCTTCCAGTCCCAGCTGAAATT...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATTGGTCCCTCTGCGCTaGCCAGATGGACTTGCTGAC +
Preference number: 2 (lower is better)
Translates to: CFKAASSLSGQLSLLREGLVPLR*PDGLAD
Trigger: GTCAGCAAGTCCATCTGGGCAGCGCAGAGGGACCAA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR CCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCGGGAGGAGCGCCTGCTaGAAAGCACAGAGCACAGCA +
Preference number: 2 (lower is better)
Translates to: LSHQATSACCSETQPRFSGRSAC*KAQSTA
Trigger: TGCTGTGCTCTGTGCTTTCCAGCAGGCGCTCCTCCC...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp GCTGGGTGTGGAGGGCAGCGCGGAGGGTATCTGCAAGAGCCTGTATTTTCCGCCACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTA +
Preference number: 2 (lower is better)
Translates to: AGCGGQRGGYLQEPVFSATSSSK*CLIRHL
Trigger: TAAATGTCTGATTAGGCATCACTTGGATGAGGAGGT...GGCGGAAAATACAGGCTCTTGCAGATACCCTCCGCGCTGCCCTCCACACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTACTGAGTCTCCTGCGTaGGGGAGGAGCGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCTESPA*GRSACW
Trigger: CCAGCAGGCGCTCCTCCCTCACGCAGGAGACTCAGT...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTRFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGGCCACACCACCGGGTaGACAGTAACTCTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: MWYECAFISSCQSQIAHLGHTTG*TVTLGS
Trigger: ACTTCCAAGAGTTACTGTCCACCCGGTGGTGTGGCC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp TTCAAGGCTGGCTCAGCCCTCCACGGGGCCTCCCAGGGAAAGGAATTCCTTTATAAGAGCAAACAGATCTaGAGAACGGAAGCCCACCCT +
Preference number: 2 (lower is better)
Translates to: FKAGSALHGASQGKEFLYKSKQI*RTEAHP
Trigger: AGGGTGGGCTTCCGTTCTCCAGATCTGTTTGCTCTT...ATAAAGGAATTCCTTTCCCTGGGAGGCCCCGTGGAGGGCTGAGCCAGCCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGGGGAAGGACGCTGTTaGGCCCTTTGTCCTGAAACT +
Preference number: 2 (lower is better)
Translates to: MWYECAFISSCQSQIAHLGEGRC*ALCPET
Trigger: AGTTTCAGGACAAAGGGCCCAACAGCGTCCTTCCCC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGACAGAGCACAGCAGTATaGCCGGAACATCTCCATAGC +
Preference number: 2 (lower is better)
Translates to: CFKAASSLSGQLSLLREGQSTAV*PEHLHS
Trigger: GCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTG...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGTCCCAGGTTGCGGGGTaGATAAATGGCCCAAATCGG +
Preference number: 2 (lower is better)
Translates to: FLKSPLETRYQPGREDILSQVAG*INGPNR
Trigger: CCGATTTGGGCCATTTATGCACCCCGCAACCTGGGA...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCATCCCAGGTTGCGGGGTaGATAAATGGCCCAAATCGG +
Preference number: 2 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPSQVAG*INGPNR
Trigger: CCGATTTGGGCCATTTATGCACCCCGCAACCTGGGA...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp GCTGGGTGTGGAGGGCAGCGCGGAGGGTATCTGCAAGAGCCTGTATTTTCCGCCGTCCATTTTGTAATTTaGGGATGGTGTGGACTTGTA +
Preference number: 2 (lower is better)
Translates to: AGCGGQRGGYLQEPVFSAVHFVI*GWCGLV
Trigger: TACAAGTCCACACCATCCCCAAATTACAAAATGGAC...GGCGGAAAATACAGGCTCTTGCAGATACCCTCCGCGCTGCCCTCCACACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCGCAAAATCAGGTTTATaGAAAACGCAGCATCTGCTT +
Preference number: 2 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTAKSGL*KTQHLL
Trigger: AAGCAGATGCTGCGTTTTCCATAAACCTGATTTTGC...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCGACTTTAAAGCTCCTTaGGATCCCAGGTTGCGGGGT +
Preference number: 2 (lower is better)
Translates to: LSHQATSACCSETQPRFSDFKAP*DPRLRG
Trigger: ACCCCGCAACCTGGGATCTCAAGGAGCTTTAAAGTC...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp AGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGTGTCTCTAACCACTTaGAGAGTGACATGTATTTCT +
Preference number: 2 (lower is better)
Translates to: SHNLAALLVNLEEARIVQVSLTT*RVTCIS
Trigger: AGAAATACATGTCACTCTTCAAGTGGTTAGAGACAC...CTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR GCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGCAGAGCACAGCAGTATaGCCGGAACATCTCCATAGC +
Preference number: 2 (lower is better)
Translates to: FLKSPLETRYQPGREDILQSTAV*PEHLHS
Trigger: GCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTG...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIRFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGAACTCACCACTGGCCTaGGCGCAAGAGCATATTTTG +
Preference number: 2 (lower is better)
Translates to: INVSPSHRGESNFPPVGGNSPLA*AQEHIL
Trigger: CAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCTCTCTCAGGACAACTaGGTCTCCTGCGTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVLSQDN*VSCVRE
Trigger: CTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAG...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCCTATATTCCGTGAGCTaGACAGTCTTGCAGGAATGC +
Preference number: 2 (lower is better)
Translates to: MWYECAFISSCQSQIAHLLYSVS*TVLQEC
Trigger: GCATTCCTGCAAGACTGTGCAGCTCACGGAATATAG...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCTATATTCCGTGAGCTaGACAGTCTTGCAGGAATGC +
Preference number: 2 (lower is better)
Translates to: PAGKHRAQQYARNISIAFLYSVS*TVLQEC
Trigger: GCATTCCTGCAAGACTGTGCAGCTCACGGAATATAG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDRFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGGCCACACCACCGGGTaGACAGTAACTCTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFGHTTG*TVTLGS
Trigger: ACTTCCAAGAGTTACTGTCCACCCGGTGGTGTGGCC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGATCCTCCCTTGTATGTaGTATGAGTGTGCCTTCATC +
Preference number: 2 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVILPCM*YECAFI
Trigger: GATGAAGGCACACTCATACCACATACAAGGGAGGAT...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCAATTTGGGGATGGTGTaGACTTGTATTTTACTTAAG +
Preference number: 2 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTNLGMV*TCILLK
Trigger: CTTAAGTAAAATACAAGTCCACACCATCCCCAAATT...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR CAA 90 bp AGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTaGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTC +
Preference number: 2 (lower is better)
Translates to: RQRQPAAVKLNHDFP*HTNPSYFHHSLAEF
Trigger: GAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGATTTCTGGAATTAGCCTaGCTGGGTAAGACCTGGATA +
Preference number: 2 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARFLELA*LGKTWI
Trigger: TATCCAGGTCTTACCCAGTCAGGCTAATTCCAGAAA...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp CATTCACAGCTCCTTGTGAGTGTGTGCACAGGAAATAAGCCGAGGGTATTATTTCCTCAAGAGTCCCCTTaGAACCCGTTACCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: HSQLLVSVCTGNKPRVLFPQESP*NPLPAW
Trigger: CCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGG...AAATAATACCCTCGGCTTATTTCCTGTGCACACACTCACAAGGAGCTGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR TCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGTGTCCTGAAACTCTTTaGTCAGTTTCTCCAGCACAG +
Preference number: 2 (lower is better)
Translates to: INVSPSHRGESNFPPVGGCPETL*SVSPAQ
Trigger: CTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACA...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR GCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCAGTACCTCCCCAGATaGTTACAAACAGTGATAGCA +
Preference number: 2 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQQYLPR*LQTVIA
Trigger: TGCTATCACTGTTTGTAAGCATCTGGGGAGGTACTG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGTCTTTTAAAGCTATGTaGGCACACACGCACGCACAC +
Preference number: 2 (lower is better)
Translates to: FLKSPLETRYQPGREDILSFKAM*AHTHAH
Trigger: GTGTGCGTGCGTGTGTGCGCACATAGCTTTAAAAGA...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCGGAAAACGCAGCATCTaGTTCAAGGCTGCTTCATCT +
Preference number: 2 (lower is better)
Translates to: LSHQATSACCSETQPRFSGKRSI*FKAASS
Trigger: AGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCC...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSRFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 2 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 2 (lower is better)
Translates to: SCTVLQECSTFQSKSETGPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 2 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAATCCTCCCTTGTATGTaGTATGAGTGTGCCTTCATC +
Preference number: 2 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARILPCM*YECAFI
Trigger: GATGAAGGCACACTCATACCACATACAAGGGAGGAT...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAGAGATAGGAGGGACATaGAAAAGGCATGGCGTACAT +
Preference number: 2 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTEIGGT*KRHGVH
Trigger: ATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTC...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAGATAGGAGGGACATaGAAAAGGCATGGCGTACAT +
Preference number: 2 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPEIGGT*KRHGVH
Trigger: ATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTC...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCACGTCCAGGCCAACGATaGACACCTTTGGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: NQVYGKRSICFKAASSLSRPGQR*TPLVPL
Trigger: CAGAGGGACCAAAGGTGTCCATCGTTGGCCTGGACG...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR TCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCCATCTCCATAGCCTTTaGCAAGGCCACACTTCATTA +
Preference number: 2 (lower is better)
Translates to: LSHQATSACCSETQPRFSHLHSL*QGHTSL
Trigger: TAATGAAGTGTGGCCTTGTCAAAGGCTATGGAGATG...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCAGCAGCTCAGCCTGTTaGTGGCATCACACATTCCTC +
Preference number: 2 (lower is better)
Translates to: SCTVLQECSTFQSKSETGSSSAC*WHHTFL
Trigger: GAGGAATGTGTGATGCCATCAACAGGCTGAGCTGCT...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR TCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTCACGACTCTGGCGATaGGATAATCGGCTCTTAAGG +
Preference number: 2 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFSRLWR*DNRLLR
Trigger: CCTTAAGAGCCGATTATCTCATCGCCAGAGTCGTGA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCACCCAGATGGACTTGCTaGCCACTGTGGACCCAGTAT +
Preference number: 2 (lower is better)
Translates to: NQVYGKRSICFKAASSLSPRWTC*PLWTQY
Trigger: ATACTGGGTCCACAGTGGTCAGCAAGTCCATCTGGG...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR CCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCACCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 2 (lower is better)
Translates to: NQVYGKRSICFKAASSLSPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTGTGGACAGTAACTCTTaGAAGTCTGTCTTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: PAGKHRAQQYARNISIAFVDSNS*KSVFPF
Trigger: AAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCAC...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGGTGGACAGTAACTCTTaGAAGTCTGTCTTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: INVSPSHRGESNFPPVGGVDSNS*KSVFPF
Trigger: AAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCAC...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTAATTTCAGCTGGGACTaGAAGAGAGAAAACTGGACA +
Preference number: 2 (lower is better)
Translates to: PAGKHRAQQYARNISIAFNFSWD*KRENWT
Trigger: TGTCCAGTTTTCTCTCTTCCAGTCCCAGCTGAAATT...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCTCCACTAATTTCAGCTaGGACTGGAAGAGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: MWYECAFISSCQSQIAHLSTNFS*DWKREN
Trigger: GTTTTCTCTCTTCCAGTCCCAGCTGAAATTAGTGGA...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATCCACTAATTTCAGCTaGGACTGGAAGAGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: CFKAASSLSGQLSLLREGSTNFS*DWKREN
Trigger: GTTTTCTCTCTTCCAGTCCCAGCTGAAATTAGTGGA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGGTCCATTTTGTAATTTaGGGATGGTGTGGACTTGTA +
Preference number: 2 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVVHFVI*GWCGLV
Trigger: TACAAGTCCACACCATCCCCAAATTACAAAATGGAC...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR CAA 90 bp GCCCTAACATGTACCATGTTGACAAAAATGCCAGATCAAATGGATTaGAGAAATAAGCCCAATTCAAGGCTGGCTCAGCCCTCCACGGGG +
Preference number: 2 (lower is better)
Translates to: ALTCTMLTKMPDQMD*RNKPNSRLAQPSTG
Trigger: CCCCGTGGAGGGCTGAGCCAGCCTTGAATTGGGCTTATTTCTCAAATCCATTTGATCTGGCATTTTTGTCAACATGGTACATGTTAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGGTCAAAGTAATGAACTaGTTTCCTCTACAAGGTCAC +
Preference number: 2 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQVKVMN*FPLQGH
Trigger: GTGACCTTGTAGAGGAAATCAGTTCATTACTTTGAC...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTA +
Preference number: 2 (lower is better)
Translates to: LSHQATSACCSETQPRFSTSSSK*CLIRHL
Trigger: TAAATGTCTGATTAGGCATCACTTGGATGAGGAGGT...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAAGTCTTTGGTTCATGTaGGGCAAAATCAGGTTTATG +
Preference number: 2 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARSLWFM*GKIRFM
Trigger: CATAAACCTGATTTTGCCTCACATGAACCAAAGACT...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTATGATATTCTGCAGATaGCCTCTCAAGGGTAAGTCC +
Preference number: 2 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPMIFCR*PLKGKS
Trigger: GGACTTACCCTTGAGAGGGCATCTGCAGAATATCAT...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTAACTCACCACTGGCCTaGGCGCAAGAGCATATTTTG +
Preference number: 2 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVNSPLA*AQEHIL
Trigger: CAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTT...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTGGCCACACCACCGGGTaGACAGTAACTCTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: EKAWRTSGNSECISKGFIGHTTG*TVTLGS
Trigger: ACTTCCAAGAGTTACTGTCCACCCGGTGGTGTGGCC...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGTCCATTTTGTAATTTaGGGATGGTGTGGACTTGTA +
Preference number: 2 (lower is better)
Translates to: CFKAASSLSGQLSLLREGVHFVI*GWCGLV
Trigger: TACAAGTCCACACCATCCCCAAATTACAAAATGGAC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAGCAAAATCAGGTTTATaGAAAACGCAGCATCTGCTT +
Preference number: 2 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARAKSGL*KTQHLL
Trigger: AAGCAGATGCTGCGTTTTCCATAAACCTGATTTTGC...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAAAAAACACAGAACAATaGCTAAGTGTCCAAGCATGT +
Preference number: 2 (lower is better)
Translates to: CFKAASSLSGQLSLLREGKNTEQ*LSVQAC
Trigger: ACATGCTTGGACACTTAGTCATTGTTCTGTGTTTTT...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCAAAAACACAGAACAATaGCTAAGTGTCCAAGCATGT +
Preference number: 2 (lower is better)
Translates to: MWYECAFISSCQSQIAHLKNTEQ*LSVQAC
Trigger: ACATGCTTGGACACTTAGTCATTGTTCTGTGTTTTT...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCCCTTGTATGTGGTATaGGTGTGCCTTCATCTCCAG +
Preference number: 2 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFPLYVV*VCLHLQ
Trigger: CTGGAGATGAAGGCACACTCATACCACATACAAGGG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAGTCTTCTATATTCCGTaGGCTGCACAGTCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: NQVYGKRSICFKAASSLSVFYIP*AAQSCR
Trigger: CCTGCAAGACTGTGCAGCTCACGGAATATAGAAGAC...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTGATTTTGTTCAAAGCTaGAAGCTCCATCAAACTTTC +
Preference number: 2 (lower is better)
Translates to: PAGKHRAQQYARNISIAFDFVQS*KLHQTF
Trigger: GAAAGTTTGATGGAGCTTTCAGCTTTGAACAAAATC...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTAGGGGTAAAGGTCTaGACTACTAAGAAAATATCT +
Preference number: 2 (lower is better)
Translates to: INVSPSHRGESNFPPVGGLGVKV*TTKKIS
Trigger: AGATATTTTCTTAGTAGTGCAGACCTTTACCCCTAG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATCTGGGAATAGCGAATaGATATCAAAAGGCTTCATT +
Preference number: 2 (lower is better)
Translates to: CFKAASSLSGQLSLLREGSGNSE*ISKGFI
Trigger: AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGGAAAACGCAGCATCTaGTTCAAGGCTGCTTCATCT +
Preference number: 2 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCGKRSI*FKAASS
Trigger: AGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAAGATCATCAGGAAAATaGCAAGTTCCCATTAAGACT +
Preference number: 2 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARRSSGK*QVPIKT
Trigger: AGTCTTAATGGGAACTTGGCATTTTCCTGATGATCT...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTGTGGACAGTAACTCTTaGAAGTCTGTCTTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPVDSNS*KSVFPF
Trigger: AAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCAC...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGACATGGAAAAGGCATaGCGTACATCTGGGAATAGC +
Preference number: 2 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCDMEKA*RTSGNS
Trigger: GCTATTCCCAGATGTACGCCATGCCTTTTCCATGTC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTGACATGGAAAAGGCATaGCGTACATCTGGGAATAGC +
Preference number: 2 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVDMEKA*RTSGNS
Trigger: GCTATTCCCAGATGTACGCCATGCCTTTTCCATGTC...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGGGCTGTCCTGTGCCTaGCTAAAGGTAGACAGACTA +
Preference number: 2 (lower is better)
Translates to: NETYIVSLEIFVPDDILQGLSCA*LKVDRL
Trigger: TAGTCTGTCTACCTTTAGCCAGGCACAGGACAGCCC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTCCCTTGTATGTGGTATaGGTGTGCCTTCATCTCCAG +
Preference number: 2 (lower is better)
Translates to: EKAWRTSGNSECISKGFIPLYVV*VCLHLQ
Trigger: CTGGAGATGAAGGCACACTCATACCACATACAAGGG...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACACTAGGGGTAAAGGTCTaGACTACTAAGAAAATATCT +
Preference number: 2 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTLGVKV*TTKKIS
Trigger: AGATATTTTCTTAGTAGTGCAGACCTTTACCCCTAG...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCACTATATTCCGTGAGCTaGACAGTCTTGCAGGAATGC +
Preference number: 2 (lower is better)
Translates to: NQVYGKRSICFKAASSLSLYSVS*TVLQEC
Trigger: GCATTCCTGCAAGACTGTGCAGCTCACGGAATATAG...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp CATTCACAGCTCCTTGTGAGTGTGTGCACAGGAAATAAGCCGAGGGTATTATTTCTATATTCCGTGAGCTaGACAGTCTTGCAGGAATGC +
Preference number: 2 (lower is better)
Translates to: HSQLLVSVCTGNKPRVLFLYSVS*TVLQEC
Trigger: GCATTCCTGCAAGACTGTGCAGCTCACGGAATATAG...AAATAATACCCTCGGCTTATTTCCTGTGCACACACTCACAAGGAGCTGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR GCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTTCTTTTAAAGCTATGTaGGCACACACGCACGCACAC +
Preference number: 2 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSSFKAM*AHTHAH
Trigger: GTGTGCGTGCGTGTGTGCGCACATAGCTTTAAAAGA...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATCTGGGAATAGCGAATaGATATCAAAAGGCTTCATT +
Preference number: 2 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTSGNSE*ISKGFI
Trigger: AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGA...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTATGATATTCTGCAGATaGCCTCTCAAGGGTAAGTCC +
Preference number: 2 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCMIFCR*PLKGKS
Trigger: GGACTTACCCTTGAGAGGGCATCTGCAGAATATCAT...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTATCCTCCCTTGTATGTaGTATGAGTGTGCCTTCATC +
Preference number: 2 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCILPCM*YECAFI
Trigger: GATGAAGGCACACTCATACCACATACAAGGGAGGAT...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp AATAAAGTTAAATTGCACGTGCAATACGGAACACTGTCAATGGACTGCACCTTGGGGCTGTCCTGTGCCTaGCTAAAGGTAGACAGACTA +
Preference number: 2 (lower is better)
Translates to: NKVKLHVQYGTLSMDCTLGLSCA*LKVDRL
Trigger: TAGTCTGTCTACCTTTAGCCAGGCACAGGACAGCCC...CAAGGTGCAGTCCATTGACAGTGTTCCGTATTGCACGTGCAATTTAACTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTAATTTGGGGATGGTGTaGACTTGTATTTTACTTAAG +
Preference number: 2 (lower is better)
Translates to: PAGKHRAQQYARNISIAFNLGMV*TCILLK
Trigger: CTTAAGTAAAATACAAGTCCACACCATCCCCAAATT...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CAA 90 bp AATCCACAGCCTGGACAAAAACAAACAATTGAGCAGCTCAGCCTGTaGATGGCATCACACATTCCTCTCTGCCACATGGAAAAAGTTACA +
Preference number: 2 (lower is better)
Translates to: NPQPGQKQTIEQLSL*MASHIPLCHMEKVT
Trigger: TGTAACTTTTTCCATGTGGCAGAGAGGAATGTGTGATGCCATCAACAGGCTGAGCTGCTCAATTGTTTGTTTTTGTCCAGGCTGTGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR CAA 90 bp CTCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATaGAACCGCCGTCCTTCAATTTTCTTCACACTATCAACACTGCAG +
Preference number: 2 (lower is better)
Translates to: LNMEKSCHGSELHNA*NRRPSIFFTLSTLQ
Trigger: CTGCAGTGTTGATAGTGTGAAGAAAATTGAAGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR TCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGGAGAGCTCACTGAATaGTGTCAAAGTAATGAACTG +
Preference number: 2 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDGELTE*CQSNEL
Trigger: CAGTTCATTACTTTGACATCATTCAGTGAGCTCTCC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGGAGAGCTCACTGAATaGTGTCAAAGTAATGAACTG +
Preference number: 2 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCGELTE*CQSNEL
Trigger: CAGTTCATTACTTTGACATCATTCAGTGAGCTCTCC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTATCCTCCCTCTGAACTaGTGGTGTTTAGTATCGATA +
Preference number: 2 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVILPLN*WCLVSI
Trigger: TATCGATACTAAACACCATCAGTTCAGAGGGAGGAT...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTGATTTTGTTCAAAGCTaGAAGCTCCATCAAACTTTC +
Preference number: 2 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPDFVQS*KLHQTF
Trigger: GAAAGTTTGATGGAGCTTTCAGCTTTGAACAAAATC...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGGAAAACGCAGCATCTaGTTCAAGGCTGCTTCATCT +
Preference number: 2 (lower is better)
Translates to: NETYIVSLEIFVPDDILQGKRSI*FKAASS
Trigger: AGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTTCACACATTCCTCTCTaGCACATGGAAAAAGTTACA +
Preference number: 2 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFISHIPL*HMEKVT
Trigger: TGTAACTTTTTCCATGTGGCAGAGAGGAATGTGTGA...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR CCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGAGATAGGAGGGACATaGAAAAGGCATGGCGTACAT +
Preference number: 2 (lower is better)
Translates to: NETYIVSLEIFVPDDILQEIGGT*KRHGVH
Trigger: ATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CAA 90 bp ATGGCATCACACATTCCTCTCTGCCACATGGAAAAAGTTACAGTCTaGACTGTCAACTTCCTCCTTCCTTGTCCTCATTTCAGATTTCGT +
Preference number: 2 (lower is better)
Translates to: MASHIPLCHMEKVTV*TVNFLLPCPHFRFR
Trigger: ACGAAATCTGAAATGAGGACAAGGAAGGAGGAAGTTGACAGTCAAGACTGTAACTTTTTCCATGTGGCAGAGAGGAATGTGTGATGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTA +
Preference number: 2 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSTSSSK*CLIRHL
Trigger: TAAATGTCTGATTAGGCATCACTTGGATGAGGAGGT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGTCTTCTATATTCCGTaGGCTGCACAGTCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKVFYIP*AAQSCR
Trigger: CCTGCAAGACTGTGCAGCTCACGGAATATAGAAGAC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTATCCTCCCTCTGAACTaGTGGTGTTTAGTATCGATA +
Preference number: 2 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSILPLN*WCLVSI
Trigger: TATCGATACTAAACACCATCAGTTCAGAGGGAGGAT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAATCCTCCCTCTGAACTaGTGGTGTTTAGTATCGATA +
Preference number: 2 (lower is better)
Translates to: NQVYGKRSICFKAASSLSILPLN*WCLVSI
Trigger: TATCGATACTAAACACCATCAGTTCAGAGGGAGGAT...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTAGTCTTTGGTTCATGTaGGGCAAAATCAGGTTTATG +
Preference number: 2 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVSLWFM*GKIRFM
Trigger: CATAAACCTGATTTTGCCTCACATGAACCAAAGACT...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTCTAGGGGTAAAGGTCTaGACTACTAAGAAAATATCT +
Preference number: 2 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFILGVKV*TTKKIS
Trigger: AGATATTTTCTTAGTAGTGCAGACCTTTACCCCTAG...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGATCCTCCCTTGTATGTaGTATGAGTGTGCCTTCATC +
Preference number: 2 (lower is better)
Translates to: NETYIVSLEIFVPDDILQILPCM*YECAFI
Trigger: GATGAAGGCACACTCATACCACATACAAGGGAGGAT...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTAATTTCAGCTGGGACTaGAAGAGAGAAAACTGGACA +
Preference number: 2 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSNFSWD*KRENWT
Trigger: TGTCCAGTTTTCTCTCTTCCAGTCCCAGCTGAAATT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTTCCACTAATTTCAGCTaGGACTGGAAGAGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSSTNFS*DWKREN
Trigger: GTTTTCTCTCTTCCAGTCCCAGCTGAAATTAGTGGA...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGTCCATTTTGTAATTTaGGGATGGTGTGGACTTGTA +
Preference number: 2 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCVHFVI*GWCGLV
Trigger: TACAAGTCCACACCATCCCCAAATTACAAAATGGAC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CAA 90 bp CTGAGTAAAATGCCATGTCTTCTATATTCCGTGAGCTGCACAGTCTaGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTA +
Preference number: 2 (lower is better)
Translates to: LSKMPCLLYSVSCTV*QECSTFQSKSETGL
Trigger: TAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATATAGAAGACATGGCATTTTACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTA +
Preference number: 2 (lower is better)
Translates to: EKAWRTSGNSECISKGFITSSSK*CLIRHL
Trigger: TAAATGTCTGATTAGGCATCACTTGGATGAGGAGGT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGATCCTCCCTCTGAACTaGTGGTGTTTAGTATCGATA +
Preference number: 2 (lower is better)
Translates to: NETYIVSLEIFVPDDILQILPLN*WCLVSI
Trigger: TATCGATACTAAACACCATCAGTTCAGAGGGAGGAT...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCTAGGGGTAAAGGTCTaGACTACTAAGAAAATATCT +
Preference number: 2 (lower is better)
Translates to: SCTVLQECSTFQSKSETGLGVKV*TTKKIS
Trigger: AGATATTTTCTTAGTAGTGCAGACCTTTACCCCTAG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR GCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAATCCCTGATGATATTCTaGAGATGCCCTCTCAAGGGT +
Preference number: 2 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKSLMIF*RCPLKG
Trigger: ACCCTTGAGAGGGCATCTGCAGAATATCATCAGGGA...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAACATCTGCTTCAAGGCTaGTTCATCTCTCTCAGGACA +
Preference number: 2 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKHLLQG*FISLRT
Trigger: TGTCCTGAGAGAGATGAAGCAGCCTTGAAGCAGATG...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR GCA 90 bp AGACTAGTGGGGACTGCTACAGATAAAATGAGATACAAAGAACATTTGCAAATACAGGCAACGTCAGCCTaGTGCAGTGAAACTCAACCA +
Preference number: 2 (lower is better)
Translates to: RLVGTATDKMRYKEHLQIQATSA*CSETQP
Trigger: TGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTG...TATTTGCAAATGTTCTTTGTATCTCATTTTATCTGTAGCAGTCCCCACTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGTGGACAGTAACTCTTaGAAGTCTGTCTTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: NETYIVSLEIFVPDDILQVDSNS*KSVFPF
Trigger: AAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCAC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGACATGGAAAAGGCATaGCGTACATCTGGGAATAGC +
Preference number: 2 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKDMEKA*RTSGNS
Trigger: GCTATTCCCAGATGTACGCCATGCCTTTTCCATGTC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp AGACTAGTGGGGACTGCTACAGATAAAATGAGATACAAAGAACATTTGCAAATATGCGGGGTGCATAAATaGCCCAAATCGGAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: RLVGTATDKMRYKEHLQICGVHK*PKSESV
Trigger: CACACTCTCCGATTTGGGCCATTTATGCACCCCGCA...TATTTGCAAATGTTCTTTGTATCTCATTTTATCTGTAGCAGTCCCCACTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR CAA 90 bp AAATCCCTCTGGCCCACACAGATCTGTAATTCACTAGGCTCGTGTTaGCTACAAATAGTGCTAATAAAGTTAAATTGCACGTGCAATACG +
Preference number: 2 (lower is better)
Translates to: KSLWPTQICNSLGSC*LQIVLIKLNCTCNT
Trigger: CGTATTGCACGTGCAATTTAACTTTATTAGCACTATTTGTAGCAAACACGAGCCTAGTGAATTACAGATCTGTGTGGGCCAGAGGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAAAAAACACAGAACAATaGCTAAGTGTCCAAGCATGT +
Preference number: 2 (lower is better)
Translates to: NQVYGKRSICFKAASSLSKNTEQ*LSVQAC
Trigger: ACATGCTTGGACACTTAGTCATTGTTCTGTGTTTTT...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTAAAAAGTTACAGTCTTaGCTGTCAACTTCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: EKAWRTSGNSECISKGFIKKLQS*LSTSSF
Trigger: GAAGGAGGAAGTTGACAGTCAAGACTGTAACTTTTT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR CAA 90 bp TTCAGTTCTGCCTTGTGTTGTTTATTGTATTCTGTGATGAGGTCGTaGATGCAGATGGTAGGGTTACTGTTAGTCACATTAAATCCACAG +
Preference number: 2 (lower is better)
Translates to: FSSALCCLLYSVMRS*MQMVGLLLVTLNPQ
Trigger: CTGTGGATTTAATGTGACTAACAGTAACCCTACCATCTGCATCAACGACCTCATCACAGAATACAATAAACAACACAAGGCAGAACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTAAAAACACAGAACAATaGCTAAGTGTCCAAGCATGT +
Preference number: 2 (lower is better)
Translates to: EKAWRTSGNSECISKGFIKNTEQ*LSVQAC
Trigger: ACATGCTTGGACACTTAGTCATTGTTCTGTGTTTTT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR TCA 90 bp AATAAAGTTAAATTGCACGTGCAATACGGAACACTGTCAATGGACTGCACCTTGAGTCTTTGGTTCATGTaGGGCAAAATCAGGTTTATG +
Preference number: 2 (lower is better)
Translates to: NKVKLHVQYGTLSMDCTLSLWFM*GKIRFM
Trigger: CATAAACCTGATTTTGCCTCACATGAACCAAAGACT...CAAGGTGCAGTCCATTGACAGTGTTCCGTATTGCACGTGCAATTTAACTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR GCA 90 bp AGACTAGTGGGGACTGCTACAGATAAAATGAGATACAAAGAACATTTGCAAATATCTTTTAAAGCTATGTaGGCACACACGCACGCACAC +
Preference number: 2 (lower is better)
Translates to: RLVGTATDKMRYKEHLQISFKAM*AHTHAH
Trigger: GTGTGCGTGCGTGTGTGCGCACATAGCTTTAAAAGA...TATTTGCAAATGTTCTTTGTATCTCATTTTATCTGTAGCAGTCCCCACTAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR GCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGTCTGGGAATAGCGAATaGATATCAAAAGGCTTCATT +
Preference number: 2 (lower is better)
Translates to: NETYIVSLEIFVPDDILQSGNSE*ISKGFI
Trigger: AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGA...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAAATTTCAGCTGGGACTaGAAGAGAGAAAACTGGACA +
Preference number: 2 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKNFSWD*KRENWT
Trigger: TGTCCAGTTTTCTCTCTTCCAGTCCCAGCTGAAATT...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGAATTTGGGGATGGTGTaGACTTGTATTTTACTTAAG +
Preference number: 2 (lower is better)
Translates to: NETYIVSLEIFVPDDILQNLGMV*TCILLK
Trigger: CTTAAGTAAAATACAAGTCCACACCATCCCCAAATT...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGTCCATTTTGTAATTTaGGGATGGTGTGGACTTGTA +
Preference number: 2 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKVHFVI*GWCGLV
Trigger: TACAAGTCCACACCATCCCCAAATTACAAAATGGAC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR TCA 90 bp AGACTAGTGGGGACTGCTACAGATAAAATGAGATACAAAGAACATTTGCAAATAATAGAAGCGGAGTTTTaGGAGTCTTTGGTTCATGTG +
Preference number: 2 (lower is better)
Translates to: RLVGTATDKMRYKEHLQIIEAEF*ESLVHV
Trigger: CACATGAACCAAAGACTCTCAAAACTCCGCTTCTAT...TATTTGCAAATGTTCTTTGTATCTCATTTTATCTGTAGCAGTCCCCACTAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR GCA 90 bp AATAAAGTTAAATTGCACGTGCAATACGGAACACTGTCAATGGACTGCACCTTGAACACTGCAGCATTTTaGTGCTTTATCAAAATGGTT +
Preference number: 2 (lower is better)
Translates to: NKVKLHVQYGTLSMDCTLNTAAF*CFIKMV
Trigger: AACCATTTTGATAAAGCAGCAAAATGCTGCAGTGTT...CAAGGTGCAGTCCATTGACAGTGTTCCGTATTGCACGTGCAATTTAACTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR GCA 72 bp CCCCCGACCTGTGCACCCGCACCCCAGTCGGCCACTTaGTCTCACATCAGGCAACGTCAGCCTGCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: PPTCAPAPQSAT*SHIRQRQPAAV
Trigger: CACTGCAGCAGGCTGACGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGGTGCGGGTGCACAGGTCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR TCA 72 bp TCCGGGTGCACAGTCACAACCTCGCCGCCCTCCTGGTaGACCTGGAGGAAGCCAGAATCGTCCAGGCCAACG +
Preference number: 3 (lower is better)
Translates to: SGCTVTTSPPSW*TWRKPESSRPT
Trigger: CGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACTGTGCACCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR-3UTR CAA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCACCCCAGTCGGCCACTaGCTCTCACATCAGGCAACG +
Preference number: 3 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTTPVGH*LSHQAT
Trigger: CGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGGT...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR TCA 72 bp TCGGGGACGCCCGGCATTACCGCCGTTTGGGGAGGATaGGGTTTCTCAGCATGTCGAAGGAGTTGCCGTCCG +
Preference number: 3 (lower is better)
Translates to: SGTPGITAVWGG*GFSACRRSCRP
Trigger: CGGACGGCAACTCCTTCGACATGCTGAGAAACCTCATCCTCCCCAAACGGCGGTAATGCCGGGCGTCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR CCA 72 bp GCAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTaGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGC +
Preference number: 3 (lower is better)
Translates to: ANLGPWVMQRRG*MVGRDVPASPR
Trigger: GCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGCATGACCCACGGTCCTAAATTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR TCA 72 bp GGAGAACGGAAGCCCACCCTGCCTCCCTTTTCCATCTaGAGCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTT +
Preference number: 3 (lower is better)
Translates to: GERKPTLPPFSI*SSAGRLAPLFV
Trigger: AACAAAGAGAGGAGCCAGCCTCCCCGCACTGCTTCAGATGGAAAAGGGAGGCAGGGTGGGCTTCCGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR GCA 72 bp ATCGTCCAGGCCAACGATGGACACCTTTGGTCCCTCTaGGCTGCCCAGATGGACTTGCTGACCACTGTGGAC +
Preference number: 3 (lower is better)
Translates to: IVQANDGHLWSL*AAQMDLLTTVD
Trigger: GTCCACAGTGGTCAGCAAGTCCATCTGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTTGGCCTGGACGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR CCA 72 bp TGCCTCCCTTTTCCATCTGAAGCAGTGCGGGGAGGCTaGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGG +
Preference number: 3 (lower is better)
Translates to: CLPFPSEAVRGG*LLSLFPDSRAR
Trigger: CCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGCTTCAGATGGAAAAGGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR CCA 72 bp GAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATaGACACCTTTGGTCCCTCTGCGCTGCCCAGATGGA +
Preference number: 3 (lower is better)
Translates to: EPGGSQNRPGQR*TPLVPLRCPDG
Trigger: TCCATCTGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR TCA 72 bp TGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTaGGGGAGGAGCGCCTGCTGGAAAGCACAGAGCACA +
Preference number: 3 (lower is better)
Translates to: CFISLRTTESPA*GRSACWKAQST
Trigger: TGTGCTCTGTGCTTTCCAGCAGGCGCTCCTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CCA 72 bp TTCCATTCATACCTTTGTAGAGCAGTGGGCTGGGTGTaGAGGGCAGCGCGGAGGGTATCTGCAAGAGCCTGT +
Preference number: 3 (lower is better)
Translates to: FHSYLCRAVGWV*RAARRVSARAC
Trigger: ACAGGCTCTTGCAGATACCCTCCGCGCTGCCCTCCACACCCAGCCCACTGCTCTACAAAGGTATGAATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CAA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCAGTCCATTTTGTAATTaGGGGATGGTGTGGACTTGT +
Preference number: 3 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTSPFCN*GMVWTC
Trigger: ACAAGTCCACACCATCCCCAAATTACAAAATGGACT...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CAA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGATCCTCAAGAGTCCCCTaGAAACCCGTTACCAGCCTG +
Preference number: 3 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARSSRVP*KPVTSL
Trigger: CAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGA...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CAA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCATCCTCAAGAGTCCCCTaGAAACCCGTTACCAGCCTG +
Preference number: 3 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPSSRVP*KPVTSL
Trigger: CAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGA...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CAA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGGAGCAGCTCAGCCTGTaGATGGCATCACACATTCCT +
Preference number: 3 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQEQLSL*MASHIP
Trigger: AGGAATGTGTGATGCCATCAACAGGCTGAGCTGCTC...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR TCA 72 bp GAAGGACGCTGTTGGGCCCTTTGTCCTGAAACTCTTTaGTCAGTTTCTCCAGCACAGTCACGACTCTGGCGA +
Preference number: 3 (lower is better)
Translates to: EGRCWALCPETL*SVSPAQSRLWR
Trigger: TCGCCAGAGTCGTGACTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAACAGCGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR GCA 72 bp GGCCACTTGCTCTCACATCAGGCAACGTCAGCCTGCTaGAGTGAAACTCAACCACGATTTTCCTTTGCACAC +
Preference number: 3 (lower is better)
Translates to: GHLLSHQATSAC*SETQPRFSFAH
Trigger: GTGTGCAAAGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAGCAAGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR GCA 72 bp GTCGGCCACTTGCTCTCACATCAGGCAACGTCAGCCTaGTGCAGTGAAACTCAACCACGATTTTCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: VGHLLSHQATSA*CSETQPRFSFA
Trigger: TGCAAAGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAGCAAGTGGCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CAA 90 bp TTCAAGGCTGGCTCAGCCCTCCACGGGGCCTCCCAGGGAAAGGAATTCCTTTATAGTCCATTTTGTAATTaGGGGATGGTGTGGACTTGT +
Preference number: 3 (lower is better)
Translates to: FKAGSALHGASQGKEFLYSPFCN*GMVWTC
Trigger: ACAAGTCCACACCATCCCCAAATTACAAAATGGACT...ATAAAGGAATTCCTTTCCCTGGGAGGCCCCGTGGAGGGCTGAGCCAGCCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR GCA 72 bp TGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTaGAAATTTAGGACCGTGGGTCATGCAGCGAAGGGG +
Preference number: 3 (lower is better)
Translates to: CLSVGLMVRVTI*KFRTVGHAAKG
Trigger: CCCCTTCGCTGCATGACCCACGGTCCTAAATTTGCAAATTGTGACTCTTACCATGAGGCCCACTGACAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR CCA 72 bp TTCTCCCATGTTCTGCCTGTTAAGAGCAAACAGATCTaGAGAACGGAAGCCCACCCTGCCTCCCTTTTCCAT +
Preference number: 3 (lower is better)
Translates to: FSHVLPVKSKQI*RTEAHPASLFH
Trigger: ATGGAAAAGGGAGGCAGGGTGGGCTTCCGTTCTCCAGATCTGTTTGCTCTTAACAGGCAGAACATGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CAA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTTTAGCCTCGAGATCTTaGTCCCTGATGATATTCTGC +
Preference number: 3 (lower is better)
Translates to: PAGKHRAQQYARNISIAFLASRS*SLMIFC
Trigger: GCAGAATATCATCAGGGACAAAGATCTCGAGGCTAA...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CAA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTGCTCTGAGAGAGGGCTaGCCTTATATTACAAAGTCT +
Preference number: 3 (lower is better)
Translates to: PAGKHRAQQYARNISIAFALREG*PYITKS
Trigger: AGACTTTGTAATATAAGGCAAGCCCTCTCTCAGAGC...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CAA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGCTCTGAGAGAGGGCTaGCCTTATATTACAAAGTCT +
Preference number: 3 (lower is better)
Translates to: CFKAASSLSGQLSLLREGALREG*PYITKS
Trigger: AGACTTTGTAATATAAGGCAAGCCCTCTCTCAGAGC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CAA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGCTGCCCAGATGGACTaGCTGACCACTGTGGACCCA +
Preference number: 3 (lower is better)
Translates to: NETYIVSLEIFVPDDILQAAQMD*LTTVDP
Trigger: TGGGTCCACAGTGGTCAGCAAGTCCATCTGGGCAGC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR GCA 72 bp TCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTaGTTCATCTCTCTCAGGACAACTGAGTCTCCTGCG +
Preference number: 3 (lower is better)
Translates to: SGLWKTQHLLQG*FISLRTTESPA
Trigger: CGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR GCA 72 bp CCCATTAAGACTTTAAAGCTCCTTGAGATCCCAGGTTaGGGGGTGCATAAATGGCCCAAATCGGAGAGTGTG +
Preference number: 3 (lower is better)
Translates to: PIKTLKLLEIPG*GVHKWPKSESV
Trigger: CACACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCTTTAAAGTCTTAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CAA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAAGTCCATTTTGTAATTaGGGGATGGTGTGGACTTGT +
Preference number: 3 (lower is better)
Translates to: CFKAASSLSGQLSLLREGSPFCN*GMVWTC
Trigger: ACAAGTCCACACCATCCCCAAATTACAAAATGGACT...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CAA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCCAGGAAGCCCAGTTATaGCTGTGTTCTATTTTAGGG +
Preference number: 3 (lower is better)
Translates to: LSHQATSACCSETQPRFSQEAQL*LCSILG
Trigger: CCCTAAAATAGAACACAGCAATAACTGGGCTTCCTG...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CAA 90 bp AATAAAGTTAAATTGCACGTGCAATACGGAACACTGTCAATGGACTGCACCTTGACCCCAGTCGGCCACTaGCTCTCACATCAGGCAACG +
Preference number: 3 (lower is better)
Translates to: NKVKLHVQYGTLSMDCTLTPVGH*LSHQAT
Trigger: CGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGGT...CAAGGTGCAGTCCATTGACAGTGTTCCGTATTGCACGTGCAATTTAACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CAA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCGTGTCTCTAACCACTaGAAGAGTGACATGTATTTC +
Preference number: 3 (lower is better)
Translates to: PAGKHRAQQYARNISIAFRVSNH*KSDMYF
Trigger: GAAATACATGTCACTCTTCAAGTGGTTAGAGACACG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR TCA 72 bp CTTGCTCTCACATCAGGCAACGTCAGCCTGCTGCAGTaGAACTCAACCACGATTTTCCTTTGCACACAAATC +
Preference number: 3 (lower is better)
Translates to: LALTSGNVSLLQ*NSTTIFLCTQI
Trigger: GATTTGTGTGCAAAGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR TCA 72 bp CCACGCACTCAGCTATACCTCATTCACAGCTCCTTGTaGGTGTGTGCACAGGAAATAAGCCGAGGGTATTAT +
Preference number: 3 (lower is better)
Translates to: PRTQLYLIHSSL*VCAQEISRGYY
Trigger: ATAATACCCTCGGCTTATTTCCTGTGCACACACTCACAAGGAGCTGTGAATGAGGTATAGCTGAGTGCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CAA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTGGAAGGGAGGATATCTaGCCTTTTACAAAATACGGT +
Preference number: 3 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPGREDI*PFTKYG
Trigger: ACCGTATTTTGTAAAAGGCAAGATATCCTCCCTTCC...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR TCA 72 bp GCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTAAGGATTCTGAACTTG +
Preference number: 3 (lower is better)
Translates to: AVRAKSPTSSSK*CLIRHLRILNL
Trigger: CAAGTTCAGAATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR GCA 72 bp CAGCTCAGCCTGTTGATGGCATCACACATTCCTCTCTaGCACATGGAAAAAGTTACAGTCTTGACTGTCAAC +
Preference number: 3 (lower is better)
Translates to: QLSLLMASHIPL*HMEKVTVLTVN
Trigger: GTTGACAGTCAAGACTGTAACTTTTTCCATGTGGCAGAGAGGAATGTGTGATGCCATCAACAGGCTGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR CCA 72 bp CCTGTCAAGCTTCATTATTACGTGGCAAAATCCCTCTaGCCCACACAGATCTGTAATTCACTAGGCTCGTGT +
Preference number: 3 (lower is better)
Translates to: PVKLHYYVAKSL*PTQICNSLGSC
Trigger: ACACGAGCCTAGTGAATTACAGATCTGTGTGGGCCAGAGGGATTTTGCCACGTAATAATGAAGCTTGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CAA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTAAGGATTCTGAACTaGATCCTGTCTCTTCACAAT +
Preference number: 3 (lower is better)
Translates to: LSHQATSACCSETQPRFSLRILN*ILSLHN
Trigger: ATTGTGAAGAGACAGGATCAAGTTCAGAATCCTTAA...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR-3UTR CAA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGCCTTGTGTTGTTTATaGTATTCTGTGATGAGGTCG +
Preference number: 3 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFALCCL*YSVMRS
Trigger: CGACCTCATCACAGAATACAATAAACAACACAAGGC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR TCA 72 bp AAGGAGAGCTCACTGAATGATGTCAAAGTAATGAACTaGTTTCCTCTACAAGGTCACTGCAACCACACCAGC +
Preference number: 3 (lower is better)
Translates to: KESSLNDVKVMN*FPLQGHCNHTS
Trigger: GCTGGTGTGGTTGCAGTGACCTTGTAGAGGAAATCAGTTCATTACTTTGACATCATTCAGTGAGCTCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR TCA 72 bp AGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTaGCAAGGCCACACTTCATTAGTTTTAATTTGCAGA +
Preference number: 3 (lower is better)
Translates to: STAVCPEHLHSL*QGHTSLVLICR
Trigger: TCTGCAAATTAAAACTAATGAAGTGTGGCCTTGTCAAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR GCA 72 bp CTGAGTAAAATGCCATGTCTTCTATATTCCGTGAGCTaGACAGTCTTGCAGGAATGCTCCACATTTCAGAGT +
Preference number: 3 (lower is better)
Translates to: LSKMPCLLYSVS*TVLQECSTFQS
Trigger: ACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATATAGAAGACATGGCATTTTACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR GCA 72 bp TTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTaGCTTTTACAAAATACGGTCGATACTCAATGCACA +
Preference number: 3 (lower is better)
Translates to: LKPVTSLEGRIS*LLQNTVDTQCT
Trigger: TGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
3UTR CCA 72 bp AGAGTCTTTGGTTCATGTGAGGCAAAATCAGGTTTATaGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATC +
Preference number: 3 (lower is better)
Translates to: RVFGSCEAKSGL*KTQHLLQGCFI
Trigger: GATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATTTTGCCTCACATGAACCAAAGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR GCA 72 bp CTTCTATATTCCGTGAGCTGCACAGTCTTGCAGGAATaGTCCACATTTCAGAGTAAATCTGAAACTGGCTTA +
Preference number: 3 (lower is better)
Translates to: LLYSVSCTVLQE*STFQSKSETGL
Trigger: TAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATATAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CCA 72 bp CTTACAAACAGTGATAGCATACCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTT +
Preference number: 3 (lower is better)
Translates to: LTNSDSIPLTHH*PGRKSIFWFVF
Trigger: AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CCA 72 bp AAGTTCAACAGAGATAGGAGGGACATGGAAAAGGCATaGCGTACATCTGGGAATAGCGAATGCATATCAAAA +
Preference number: 3 (lower is better)
Translates to: KFNRDRRDMEKA*RTSGNSECISK
Trigger: TTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTCTGTTGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CAA 90 bp CATTCACAGCTCCTTGTGAGTGTGTGCACAGGAAATAAGCCGAGGGTATTATTTTACAATGAAGGGATTTaGTTCAAAGCTGAAAGCTCC +
Preference number: 3 (lower is better)
Translates to: HSQLLVSVCTGNKPRVLFYNEGI*FKAESS
Trigger: GGAGCTTTCAGCTTTGAACAAAATCCCTTCATTGTA...AAATAATACCCTCGGCTTATTTCCTGTGCACACACTCACAAGGAGCTGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR TCA 72 bp AAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTaGACCGCCGTCCTTCAATTTTCTTCACACTATCAA +
Preference number: 3 (lower is better)
Translates to: KNPVMALNCTMH*TAVLQFSSHYQ
Trigger: TTGATAGTGTGAAGAAAATTGAAGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR CCA 72 bp AAGTTAAATTGCACGTGCAATACGGAACACTGTCAATaGACTGCACCTTGTGAAGGAAAAACATGCTTAAGG +
Preference number: 3 (lower is better)
Translates to: KLNCTCNTEHCQ*TAPCEGKTCLR
Trigger: CCTTAAGCATGTTTTTCCTTCACAAGGTGCAGTCCATTGACAGTGTTCCGTATTGCACGTGCAATTTAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CAA 90 bp CATTCACAGCTCCTTGTGAGTGTGTGCACAGGAAATAAGCCGAGGGTATTATTTTTAAGGATTCTGAACTaGATCCTGTCTCTTCACAAT +
Preference number: 3 (lower is better)
Translates to: HSQLLVSVCTGNKPRVLFLRILN*ILSLHN
Trigger: ATTGTGAAGAGACAGGATCAAGTTCAGAATCCTTAA...AAATAATACCCTCGGCTTATTTCCTGTGCACACACTCACAAGGAGCTGTGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR-3UTR CAA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGTACAATGAAGGGATTTaGTTCAAAGCTGAAAGCTCC +
Preference number: 3 (lower is better)
Translates to: NETYIVSLEIFVPDDILQYNEGI*FKAESS
Trigger: GGAGCTTTCAGCTTTGAACAAAATCCCTTCATTGTA...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CAA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGTTAAGGATTCTGAACTaGATCCTGTCTCTTCACAAT +
Preference number: 3 (lower is better)
Translates to: NETYIVSLEIFVPDDILQLRILN*ILSLHN
Trigger: ATTGTGAAGAGACAGGATCAAGTTCAGAATCCTTAA...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR-3UTR CAA 90 bp AGACTAGTGGGGACTGCTACAGATAAAATGAGATACAAAGAACATTTGCAAATAGCTCTGAGAGAGGGCTaGCCTTATATTACAAAGTCT +
Preference number: 3 (lower is better)
Translates to: RLVGTATDKMRYKEHLQIALREG*PYITKS
Trigger: AGACTTTGTAATATAAGGCAAGCCCTCTCTCAGAGC...TATTTGCAAATGTTCTTTGTATCTCATTTTATCTGTAGCAGTCCCCACTAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674895.2
3UTR TCA 72 bp CTTGTCCTCATTTCAGATTTCGTGTCTCTAACCACTTaGAGAGTGACATGTATTTCTGTCCATCTTCCTTTT +
Preference number: 3 (lower is better)
Translates to: LVLISDFVSLTT*RVTCISVHLPF
Trigger: AAAAGGAAGATGGACAGAAATACATGTCACTCTTCAAGTGGTTAGAGACACGAAATCTGAAATGAGGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp GTTGCCGTCCGGGTGCACAGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGTCCCTCCCCGTCCTTTaGCCTCGGTCTGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: VAVRVHSHNLAALLVNLESLPVL*PRSAGP
Trigger: CGGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGA...CTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACTGTGCACCCGGACGGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp GTTGCCGTCCGGGTGCACAGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGCCGTCCACGGGTCTCTaGGAGCACTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VAVRVHSHNLAALLVNLEPSTGL*EHCPPA
Trigger: TGCTGGAGGACAGTGCTCTCAGAGACCCGTGGACGG...CTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACTGTGCACCCGGACGGCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR CAA 72 bp TCCCCCGACCTGTGCACCCGCACCCCAGTCGGCCACTaGCTCTCACATCAGGCAACGTCAGCCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SPDLCTRTPVGH*LSHQATSACCS
Trigger: ACTGCAGCAGGCTGACGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGGTGCGGGTGCACAGGTCGGGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
CDS-3UTR CCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCACAGACCGGACCTCGTaGAACCGGCCGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTTDRTS*NRPRAS
Trigger: GGAAGCCCTCGGCCGGTTCCACGAGGTCCGGTCTGT...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCCGGACGGGGCCTTCCTaGTACCTGCAGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTRTGPS*YLQPLL
Trigger: GAGCAGTGGCTGCAGGTACCAGGAAGGCCCCGTCCG...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
3UTR CAA 72 bp CAGCCGCGTCTCGGGGACGCCCGGCATTACCGCCGTTaGGGGAGGATGAGGTTTCTCAGCATGTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QPRLGDARHYRR*GRMRFLSMSKE
Trigger: CTCCTTCGACATGCTGAGAAACCTCATCCTCCCCAAACGGCGGTAATGCCGGGCGTCCCCGAGACGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCCACCTTTGGTCCCTCTaGGCTGCCCAGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGHLWSL*AAQMDL
Trigger: CAAGTCCATCTGGGCAGCGCAGAGGGACCAAAGGTG...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCGCCGTTTGGGGAGGATaGGGTTTCTCAGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGAVWGG*GFSACR
Trigger: TCGACATGCTGAGAAACCTCATCCTCCCCAAACGGC...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCAGCTACTCGGGATGCTaGGGCAGGAGAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGSYSGC*GRRITG
Trigger: TCCAGTGATTCTCCTGCCTCAGCATCCCGAGTAGCT...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR GCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCCTTGAGATCCCAGGTTaGGGGGTGCATAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGLEIPG*GVHKWP
Trigger: GGGCCATTTATGCACCCCGCAACCTGGGATCTCAAG...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCTCAGGCCGCGCCCCTaGCACCTCTGGCCACACGGG +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFLRPRP*HLWPHG
Trigger: CCCGTGTGGCCAGAGGTGGCAGGGGCGCGGCCTGAG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612277.4
CDS-3UTR TCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCGAAAGCCACCAAAGGTaGAGGATGAAGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGESHQR*RMKTGP
Trigger: TGGGCCTGTCTTCATCCTTCACCTTTGGTGGCTTTC...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCATTTCCTGCGGTGTCTaGAACATCAGCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGISCGV*NISPSR
Trigger: CCTGGATGGGCTGATGTTTCAGACACCGCAGGAAAT...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACGGCCTTCCTGGTACCTaGAGCCACTGCTCAAGACGC +
Preference number: 4 (lower is better)
Translates to: ALLVNLEEARIVQANDGHGLPGT*SHCSRR
Trigger: GCGTCTTGAGCAGTGGCTGCAGGTACCAGGAAGGCC...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATCCCTCCCCGTCCTTTaGCCTCGGTCTGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGSLPVL*PRSAGP
Trigger: CGGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTTCCCTCCCCGTCCTTTaGCCTCGGTCTGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFSLPVL*PRSAGP
Trigger: CGGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGA...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCGCAACGTCAGCCTGCTaGAGTGAAACTCAACCACGA +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGATSAC*SETQPR
Trigger: TCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGC...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTRFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp CCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGAATTTCCTGCGGTGTCTaGAACATCAGCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PRRPPGEPGGSQNRPGQRISCGV*NISPSR
Trigger: CCTGGATGGGCTGATGTTTCAGACACCGCAGGAAAT...TCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCCCCAGATGGACTTGCTaGCCACTGTGGACCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTPRWTC*PLWTQY
Trigger: ATACTGGGTCCACAGTGGTCAGCAAGTCCATCTGGG...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGACTGAGTCTCCTGCGTaGGGGAGGAGCGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVTESPA*GRSACW
Trigger: CCAGCAGGCGCTCCTCCCTCACGCAGGAGACTCAGT...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATGCTCCCCCGACCTGTaGACCCGCACCCCAGTCGGC +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTCSPDL*TRTPVG
Trigger: GCCGACTGGGGTGCGGGTGCACAGGTCGGGGGAGCA...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAACAGACCGGACCTCGTaGAACCGGCCGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGTDRTS*NRPRAS
Trigger: GGAAGCCCTCGGCCGGTTCCACGAGGTCCGGTCTGT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCGGGGAAGGACGCTGTTaGGCCCTTTGTCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTGEGRC*ALCPET
Trigger: AGTTTCAGGACAAAGGGCCCAACAGCGTCCTTCCCC...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGCGTCCAGGCCAACGATaGACACCTTTGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SHNLAALLVNLEEARIVQRPGQR*TPLVPL
Trigger: CAGAGGGACCAAAGGTGTCCATCGTTGGCCTGGACG...CTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp AGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SHNLAALLVNLEEARIVQRFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...CTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGAGAGGCTGCGCTCTGTaGCCTGTGCTCCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVRGCAL*PVLPRP
Trigger: AGGTCGGGGGAGCACAGGCCACAGAGCGCAGCCTCT...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGACCGTCCACGGGTCTCTaGGAGCACTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGPSTGL*EHCPPA
Trigger: TGCTGGAGGACAGTGCTCTCAGAGACCCGTGGACGG...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGTCGCCGCCCTCCTGGTaGACCTGGAGGAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVSPPSW*TWRKPE
Trigger: TTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGA...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACGCCGTTTGGGGAGGATaGGGTTTCTCAGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: ALLVNLEEARIVQANDGHAVWGG*GFSACR
Trigger: TCGACATGCTGAGAAACCTCATCCTCCCCAAACGGC...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp GGACTTGCTGACCACTGTGGACCCAGTATCGGTAATAAAGGGGAAGGACGCTGTACTGAGTCTCCTGCGTaGGGGAGGAGCGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLADHCGPSIGNKGEGRCTESPA*GRSACW
Trigger: CCAGCAGGCGCTCCTCCCTCACGCAGGAGACTCAGT...ACAGCGTCCTTCCCCTTTATTACCGATACTGGGTCCACAGTGGTCAGCAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCCAGAGCACAGCAGTATaGCCGGAACATCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTQSTAV*PEHLHS
Trigger: GCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTG...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAACAGACCGGACCTCGTaGAACCGGCCGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARTDRTS*NRPRAS
Trigger: GGAAGCCCTCGGCCGGTTCCACGAGGTCCGGTCTGT...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAGACCGGACCTCGTaGAACCGGCCGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQTDRTS*NRPRAS
Trigger: GGAAGCCCTCGGCCGGTTCCACGAGGTCCGGTCTGT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGTCGCCGCCCTCCTGGTaGACCTGGAGGAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGSPPSW*TWRKPE
Trigger: TTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGA...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCCCCTTGTATGTGGTATaGGTGTGCCTTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTPLYVV*VCLHLQ
Trigger: CTGGAGATGAAGGCACACTCATACCACATACAAGGG...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTTCCCTCCCCGTCCTTTaGCCTCGGTCTGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFISLPVL*PRSAGP
Trigger: CGGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGA...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGAGTTGCCGTCCGGGTaGACAGTCACAACCTCGCCG +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLELPSG*TVTTSP
Trigger: CGGCGAGGTTGTGACTGTGCACCCGGACGGCAACTC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAGAGTTGCCGTCCGGGTaGACAGTCACAACCTCGCCG +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARELPSG*TVTTSP
Trigger: CGGCGAGGTTGTGACTGTGCACCCGGACGGCAACTC...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGGAGTTGCCGTCCGGGTaGACAGTCACAACCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQELPSG*TVTTSP
Trigger: CGGCGAGGTTGTGACTGTGCACCCGGACGGCAACTC...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCCAGTACCTCCCCAGATaGTTACAAACAGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGQYLPR*LQTVIA
Trigger: TGCTATCACTGTTTGTAAGCATCTGGGGAGGTACTG...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATCCCTGATGATATTCTaGAGATGCCCTCTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: PRRPPGEPGGSQNRPGQRSLMIF*RCPLKG
Trigger: ACCCTTGAGAGGGCATCTGCAGAATATCATCAGGGA...TCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCTGCTCCCCCGACCTGTaGACCCGCACCCCAGTCGGC +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAACSPDL*TRTPVG
Trigger: GCCGACTGGGGTGCGGGTGCACAGGTCGGGGGAGCA...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCGCTCCTGCGCCGGGTaGTCGCCCGCGAATCCCTGC +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDRSCAG*SPANPC
Trigger: GCAGGGATTCGCGGGCGACCACCCGGCGCAGGAGCG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000675057.1
CDS-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCGCTCCTGCGCCGGGTaGTCGCCCGCGAATCCCTGC +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCRSCAG*SPANPC
Trigger: GCAGGGATTCGCGGGCGACCACCCGGCGCAGGAGCG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000675057.1
CDS-3UTR CCA 90 bp CCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATTCACCAAGAGCCTTTaGGTCATCTCTGCCAACATG +
Preference number: 4 (lower is better)
Translates to: PRRPPGEPGGSQNRPGQRFTKSL*VISANM
Trigger: CATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAA...TCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCCGGACGGGGCCTTCCTaGTACCTGCAGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSRTGPS*YLQPLL
Trigger: GAGCAGTGGCTGCAGGTACCAGGAAGGCCCCGTCCG...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGATCCTCTGTCCCAGCTaGGATCTCAGTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: SHNLAALLVNLEEARIVQILCPS*DLSGME
Trigger: CTCCATTCCACTGAGATCCCAGCTGGGACAGAGGAT...CTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCAACTCACCACTGGCCTaGGCGCAAGAGCATATTTTG +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTNSPLA*AQEHIL
Trigger: CAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTT...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAGGGAGGAGCGCCTGCTaGAAAGCACAGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGGRSAC*KAQSTA
Trigger: TGCTGTGCTCTGTGCTTTCCAGCAGGCGCTCCTCCC...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGGCAGTGCGGGGAGGCTaGCTCCTCTCTTTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVAVRGG*LLSLFP
Trigger: TGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGGGAGTCTATCTTCCATaGACGCCACCCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVGVYLP*TPPPAC
Trigger: GCAAGCTGGGGGTGGCGTTCATGGAAGATAGACTCC...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGCACTGCTCAAGACGCTaGGCTTCACCTCGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVHCSRR*ASPRSG
Trigger: ACCAGAGCGAGGTGAAGCTCAGCGTCTTGAGCAGTG...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp CCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGACATCTCCATAGCCTTTaGCAAGGCCACACTTCATTA +
Preference number: 4 (lower is better)
Translates to: PRRPPGEPGGSQNRPGQRHLHSL*QGHTSL
Trigger: TAATGAAGTGTGGCCTTGTCAAAGGCTATGGAGATG...TCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGACTCTCTCAGGACAACTaGGTCTCCTGCGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGLSQDN*VSCVRE
Trigger: CTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAG...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCCTCCCTTTTCCATCTaGAGCAGTGCGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQPPFSI*SSAGRL
Trigger: CAGCCTCCCCGCACTGCTTCAGATGGAAAAGGGAGG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCATTACTTTCCCCAACTaGTTGGTCTGCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGITFPN*LVCRFW
Trigger: CCAAAATCTGCAGACCAAGCAGTTGGGGAAAGTAAT...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCCCTTTGCCCTCGGTCTaGCGGGCCGCGATCACTATT +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLPLPSV*RAAITI
Trigger: AATAGTGATCGCGGCCCGGCAGACCGAGGGCAAAGG...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCCTTTGCCCTCGGTCTaGCGGGCCGCGATCACTATT +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGPLPSV*RAAITI
Trigger: AATAGTGATCGCGGCCCGGCAGACCGAGGGCAAAGG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCCTTTGCCCTCGGTCTaGCGGGCCGCGATCACTATT +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQPLPSV*RAAITI
Trigger: AATAGTGATCGCGGCCCGGCAGACCGAGGGCAAAGG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGCTCTGTGGCCTGTaGTCCCCCGACCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAALCGL*SPDLCT
Trigger: GGTGCACAGGTCGGGGGAGCACAGGCCACAGAGCGC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACCGCTCTGGTCAGCCTTaGAGAAAACCAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ALLVNLEEARIVQANDGHRSGQP*RKPSSG
Trigger: TCCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCG...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCCTTTCCCCAACTGCTTaGTCTGCAGATTTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTLSPTA*SADFGD
Trigger: ATCGCCAAAATCTGCAGACCAAGCAGTTGGGGAAAG...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACCAGCTGGGATCTCAGTaGAATGGAGATGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ALLVNLEEARIVQANDGHQLGSQ*NGDEQS
Trigger: ACTCTGCTCATCTCCATTCCACTGAGATCCCAGCTG...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACACGGACATCAGATGCTaGACAAACGGGATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ALLVNLEEARIVQANDGHTDIRC*TNGILC
Trigger: ACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGT...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp GTTGCCGTCCGGGTGCACAGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGTGGACAGTAACTCTTaGAAGTCTGTCTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: VAVRVHSHNLAALLVNLEVDSNS*KSVFPF
Trigger: AAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCAC...CTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACTGTGCACCCGGACGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCGAGCAAGTAACCTCATaGGAAACCACATCATCCCTA +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTEQVTS*ETTSSL
Trigger: TAGGGATGATGTGGTTTCTCATGAGGTTACTTGCTC...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR TCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCTGGCAAACAACAGTCTaGCCACTTGACAATCTTGGA +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTWQTTV*PLDNLG
Trigger: TCCAAGATTGTCAAGTGGTCAGACTGTTGTTTGCCA...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR TCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGACACTGCTCAAGACGCTaGGCTTCACCTCGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARHCSRR*ASPRSG
Trigger: ACCAGAGCGAGGTGAAGCTCAGCGTCTTGAGCAGTG...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCACTGCTCAAGACGCTaGGCTTCACCTCGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQHCSRR*ASPRSG
Trigger: ACCAGAGCGAGGTGAAGCTCAGCGTCTTGAGCAGTG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTACTGAGTCTCCTGCGTaGGGGAGGAGCGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFITESPA*GRSACW
Trigger: CCAGCAGGCGCTCCTCCCTCACGCAGGAGACTCAGT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCTCTCTCAGGACAACTaGGTCTCCTGCGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQLSQDN*VSCVRE
Trigger: CTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGACTCTCTCAGGACAACTaGGTCTCCTGCGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGLSQDN*VSCVRE
Trigger: CTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAG...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGACCTCAAGAGTCCCCTTaGAACCCGTTACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARPQESP*NPLPAW
Trigger: CCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGG...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGACCTCAAGAGTCCCCTTaGAACCCGTTACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGPQESP*NPLPAW
Trigger: CCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGG...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCACCTCCCTTTTCCATCTaGAGCAGTGCGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPPPFSI*SSAGRL
Trigger: CAGCCTCCCCGCACTGCTTCAGATGGAAAAGGGAGG...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTAATGGACTGCAGGCCTaGTACCGGCCGCGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFINGLQA*YRPRSA
Trigger: AGCGCTCCGCGGCCGGTATCAGGCCTGCAGTCCATT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675307.1
CDS-3UTR GCA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACTGCTCCATACCGTCCTaGTCAGGCTTAATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: ALLVNLEEARIVQANDGHCSIPS*SGLISR
Trigger: TCTTGAGATTAAGCCTGAGCAGGACGGTATGGAGCA...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCGGCCTTCCTGGTACCTaGAGCCACTGCTCAAGACGC +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSGLPGT*SHCSRR
Trigger: GCGTCTTGAGCAGTGGCTGCAGGTACCAGGAAGGCC...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACACCTTTGCCCTCGGTCTaGCGGGCCGCGATCACTATT +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTPLPSV*RAAITI
Trigger: AATAGTGATCGCGGCCCGGCAGACCGAGGGCAAAGG...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCATCCCTCCCCGTCCTTTaGCCTCGGTCTGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSSLPVL*PRSAGP
Trigger: CGGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGA...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCACCTTTGGTCCCTCTaGGCTGCCCAGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGHLWSL*AAQMDL
Trigger: CAAGTCCATCTGGGCAGCGCAGAGGGACCAAAGGTG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGCATGTCGAAGGAGTTaGCGTCCGGGTGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGACRRS*RPGAQS
Trigger: TGACTGTGCACCCGGACGGCAACTCCTTCGACATGC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGCTATATTCCGTGAGCTaGACAGTCTTGCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: SHNLAALLVNLEEARIVQLYSVS*TVLQEC
Trigger: GCATTCCTGCAAGACTGTGCAGCTCACGGAATATAG...CTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp AGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGTCTTTTAAAGCTATGTaGGCACACACGCACGCACAC +
Preference number: 4 (lower is better)
Translates to: SHNLAALLVNLEEARIVQSFKAM*AHTHAH
Trigger: GTGTGCGTGCGTGTGTGCGCACATAGCTTTAAAAGA...CTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCATGATATTCTGCAGATaGCCTCTCAAGGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTMIFCR*PLKGKS
Trigger: GGACTTACCCTTGAGAGGGCATCTGCAGAATATCAT...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCCCCCAGTCGGCCACTTaGTCTCACATCAGGCAACGT +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLPQSAT*SHIRQR
Trigger: ACGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGG...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAGCGCTCTGTGGCCTGTaGTCCCCCGACCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLALCGL*SPDLCT
Trigger: GGTGCACAGGTCGGGGGAGCACAGGCCACAGAGCGC...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGTTCCATCTGAAGCAGTaGGGGGAGGCTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQFHLKQ*GEAGSS
Trigger: AGAGGAGCCAGCCTCCCCGCACTGCTTCAGATGGAA...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATTCCATCTGAAGCAGTaGGGGGAGGCTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGFHLKQ*GEAGSS
Trigger: AGAGGAGCCAGCCTCCCCGCACTGCTTCAGATGGAA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGGGAGACGCATCGTTGTaGGGGTCACTTCGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVGDASL*GSLRQT
Trigger: TGTTTGCCGAAGTGACCCCCACAACGATGCGTCTCC...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAGGGGAAGGACGCTGTTaGGCCCTTTGTCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGGEGRC*ALCPET
Trigger: AGTTTCAGGACAAAGGGCCCAACAGCGTCCTTCCCC...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAAACGATGGACACCTTTaGTCCCTCTGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARNDGHL*SLCAAQ
Trigger: CTGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTT...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGAACGATGGACACCTTTaGTCCCTCTGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQNDGHL*SLCAAQ
Trigger: CTGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGGGAGGAGCGCCTGCTaGAAAGCACAGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPGRSAC*KAQSTA
Trigger: TGCTGTGCTCTGTGCTTTCCAGCAGGCGCTCCTCCC...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTAGAGGCTGCGCTCTGTaGCCTGTGCTCCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIRGCAL*PVLPRP
Trigger: AGGTCGGGGGAGCACAGGCCACAGAGCGCAGCCTCT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCCACCCCCAGCTTGCTaGAGTTGTCCACACTTGCTT +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQPPPAC*SCPHLL
Trigger: AAGCAAGTGTGGACAACTTCAGCAAGCTGGGGGTGG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCCCACCCCCAGCTTGCTaGAGTTGTCCACACTTGCTT +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLPPPAC*SCPHLL
Trigger: AAGCAAGTGTGGACAACTTCAGCAAGCTGGGGGTGG...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCCACCCCCAGCTTGCTaGAGTTGTCCACACTTGCTT +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGPPPAC*SCPHLL
Trigger: AAGCAAGTGTGGACAACTTCAGCAAGCTGGGGGTGG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGCGGCAGACGCAAACTTaGCTGACTCAATGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVRQTQT*LTQWCC
Trigger: ACAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCG...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTCCGTCCACGGGTCTCTaGGAGCACTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIPSTGL*EHCPPA
Trigger: TGCTGGAGGACAGTGCTCTCAGAGACCCGTGGACGG...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGGCCGTTTGGGGAGGATaGGGTTTCTCAGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGAVWGG*GFSACR
Trigger: TCGACATGCTGAGAAACCTCATCCTCCCCAAACGGC...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTA +
Preference number: 4 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTTSSSK*CLIRHL
Trigger: TAAATGTCTGATTAGGCATCACTTGGATGAGGAGGT...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATACCTCCCTTTTCCATCTaGAGCAGTGCGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIPPFSI*SSAGRL
Trigger: CAGCCTCCCCGCACTGCTTCAGATGGAAAAGGGAGG...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTATCTGGCCACACGGGCTaGGACGTCTGGCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLSGHTG*DVWLLH
Trigger: GTGCAGGAGCCAGACGTCTCAGCCCGTGTGGCCAGA...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612277.4
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGAGGAGGATGTTGGGTaGCTTTCCCGTGAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGEEDVG*LSREVD
Trigger: GTCAACCTCACGGGAAAGGCACCCAACATCCTCCTC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGTGTGCAGTGCACCCTTaGTTGTCACCTGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVCAVHP*LSPESH
Trigger: GTGGCTTTCAGGTGACAAGCAAGGGTGCACTGCACA...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GCTGTTGGGCCCTTTGTCCTGAAACTCTTTGATCAGTTTCTCCAGCACAGTCACCCTTTGCCCTCGGTCTaGCGGGCCGCGATCACTATT +
Preference number: 4 (lower is better)
Translates to: AVGPFVLKLFDQFLQHSHPLPSV*RAAITI
Trigger: AATAGTGATCGCGGCCCGGCAGACCGAGGGCAAAGG...GTGACTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGCCACGGACATCAGATaGTGGACAAACGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLATDIR*WTNGIL
Trigger: GAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGGGGAATGGACCTCACTaGTTCCACGACAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILGNGPH*FHDSHG
Trigger: TCCGTGGCTGTCGTGGAAGCAGTGAGGTCCATTCCC...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCACACCTTTGGTCCCTCTaGGCTGCCCAGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPHLWSL*AAQMDL
Trigger: CAAGTCCATCTGGGCAGCGCAGAGGGACCAAAGGTG...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGGCATGTCGAAGGAGTTaGCGTCCGGGTGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILACRRS*RPGAQS
Trigger: TGACTGTGCACCCGGACGGCAACTCCTTCGACATGC...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAGCATGTCGAAGGAGTTaGCGTCCGGGTGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTACRRS*RPGAQS
Trigger: TGACTGTGCACCCGGACGGCAACTCCTTCGACATGC...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCCTAGGGGTAAAGGTCTaGACTACTAAGAAAATATCT +
Preference number: 4 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGLGVKV*TTKKIS
Trigger: AGATATTTTCTTAGTAGTGCAGACCTTTACCCCTAG...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCTTGAGATCCCAGGTTaGGGGGTGCATAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFLEIPG*GVHKWP
Trigger: GGGCCATTTATGCACCCCGCAACCTGGGATCTCAAG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGCAGGCAACGTCAGCCTaGTGCAGTGAAACTCAACCA +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVQATSA*CSETQP
Trigger: TGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTG...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCACGACCATGCTGTATATaGTGTGCCTTGGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPRPCCI*CALGDP
Trigger: GGGGTCCCCCAAGGCACAGCATATACAGCATGGTCG...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGGGCAAGGGGCGACCATaGTGTATATGCTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGGKGRP*CICCAL
Trigger: CAAGGCACAGCATATACAGCATGGTCGCCCCTTGCC...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGGCAAGGGGCGACCATaGTGTATATGCTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLGKGRP*CICCAL
Trigger: CAAGGCACAGCATATACAGCATGGTCGCCCCTTGCC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTGGCAAGGGGCGACCATaGTGTATATGCTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFGKGRP*CICCAL
Trigger: CAAGGCACAGCATATACAGCATGGTCGCCCCTTGCC...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTCCATCTGAAGCAGTaGGGGGAGGCTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSFHLKQ*GEAGSS
Trigger: AGAGGAGCCAGCCTCCCCGCACTGCTTCAGATGGAA...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCTCAAGCAGCGCTGGGTaGTCCGATCAAAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLSSSAG*SDQSRT
Trigger: GGTTCTGCTTTGATCGGAGCACCCAGCGCTGCTTGA...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR GCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGATGAGCCATGGACCATaGAAACGCCTTCAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVMSHGP*KRLQAA
Trigger: CGCTGCTTGAAGGCGTTTGCATGGTCCATGGCTCAT...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATACAGACCGGACCTCGTaGAACCGGCCGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDTDRTS*NRPRAS
Trigger: GGAAGCCCTCGGCCGGTTCCACGAGGTCCGGTCTGT...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCGGACGGGGCCTTCCTaGTACCTGCAGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGRTGPS*YLQPLL
Trigger: GAGCAGTGGCTGCAGGTACCAGGAAGGCCCCGTCCG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACGGACGGGGCCTTCCTaGTACCTGCAGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLRTGPS*YLQPLL
Trigger: GAGCAGTGGCTGCAGGTACCAGGAAGGCCCCGTCCG...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGGAGACGCATCGTTGTaGGGGTCACTTCGGCAAACA +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGGDASL*GSLRQT
Trigger: TGTTTGCCGAAGTGACCCCCACAACGATGCGTCTCC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTGGGGAAGGACGCTGTTaGGCCCTTTGTCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFGEGRC*ALCPET
Trigger: AGTTTCAGGACAAAGGGCCCAACAGCGTCCTTCCCC...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCAACGATGGACACCTTTaGTCCCTCTGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSNDGHL*SLCAAQ
Trigger: CTGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTT...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCCCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGGGCCACACCACCGGGTaGACAGTAACTCTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQGHTTG*TVTLGS
Trigger: ACTTCCAAGAGTTACTGTCCACCCGGTGGTGTGGCC...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGGGAGGAGCGCCTGCTaGAAAGCACAGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIGRSAC*KAQSTA
Trigger: TGCTGTGCTCTGTGCTTTCCAGCAGGCGCTCCTCCC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTAGAGGCTGCGCTCTGTaGCCTGTGCTCCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVRGCAL*PVLPRP
Trigger: AGGTCGGGGGAGCACAGGCCACAGAGCGCAGCCTCT...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTGCAGTGCGGGGAGGCTaGCTCCTCTCTTTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPAVRGG*LLSLFP
Trigger: TGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCAGTCTTCAATGGACGTaGCAAAGGGCCAGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLSLQWT*QRARSG
Trigger: TCCCGACCTGGCCCTTTGCCACGTCCATTGAAGACT...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612277.4
CDS-3UTR CCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTATGGCAGCGGAGGCATaGGAGCCGGAACCTACCGTG +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFMAAEA*EPEPTV
Trigger: CACGGTAGGTTCCGGCTCCCATGCCTCCGCTGCCAT...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675307.1
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGTCTTCAATGGATTCTaGGGCCGAAACGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIVFNGF*GRNAAA
Trigger: AGCGGCCGCGTTTCGGCCTCAGAATCCATTGAAGAC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000675057.1
CDS-3UTR TCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGATTTCCTGCGGTGTCTaGAACATCAGCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGISCGV*NISPSR
Trigger: CCTGGATGGGCTGATGTTTCAGACACCGCAGGAAAT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTCGCCGCCCTCCTGGTaGACCTGGAGGAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGSPPSW*TWRKPE
Trigger: TTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGA...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGCACTTTGTACCCAAATaGTCTCCGTCACAAATGCTA +
Preference number: 4 (lower is better)
Translates to: SHNLAALLVNLEEARIVQHFVPK*SPSQML
Trigger: TAGCATTTGTGACGGAGAGCATTTGGGTACAAAGTG...CTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTGGATCATCCATAAAGTaGCTGGGCCACAAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFGSSIK*LGHKGA
Trigger: AGCACCCTTGTGGCCCAGGCACTTTATGGATGATCC...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCACTCCCAGAGGCACTaGCTCTCCTTTGTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFHSQRH*LSFVWV
Trigger: AACCCAAACAAAGGAGAGGCAGTGCCTCTGGGAGTG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCACTCCCAGAGGCACTaGCTCTCCTTTGTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGHSQRH*LSFVWV
Trigger: AACCCAAACAAAGGAGAGGCAGTGCCTCTGGGAGTG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCTGTGCAGTGCACCCTTaGTTGTCACCTGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLCAVHP*LSPESH
Trigger: GTGGCTTTCAGGTGACAAGCAAGGGTGCACTGCACA...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAGACTGTCTTGTGCAGTaGACCCTTGCTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARDCLVQ*TLACHL
Trigger: CAGGTGACAAGCAAGGGTGCACTGCACAAGACAGTC...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGACTGTCTTGTGCAGTaGACCCTTGCTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGDCLVQ*TLACHL
Trigger: CAGGTGACAAGCAAGGGTGCACTGCACAAGACAGTC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGGACTGTCTTGTGCAGTaGACCCTTGCTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQDCLVQ*TLACHL
Trigger: CAGGTGACAAGCAAGGGTGCACTGCACAAGACAGTC...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGGCCTTCCTGGTACCTaGAGCCACTGCTCAAGACGC +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFGLPGT*SHCSRR
Trigger: GCGTCTTGAGCAGTGGCTGCAGGTACCAGGAAGGCC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTGGCCTTCCTGGTACCTaGAGCCACTGCTCAAGACGC +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIGLPGT*SHCSRR
Trigger: GCGTCTTGAGCAGTGGCTGCAGGTACCAGGAAGGCC...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGGGAATGGACCTCACTaGTTCCACGACAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIGNGPH*FHDSHG
Trigger: TCCGTGGCTGTCGTGGAAGCAGTGAGGTCCATTCCC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGAGTTGCCGTCCGGGTaGACAGTCACAACCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDELPSG*TVTTSP
Trigger: CGGCGAGGTTGTGACTGTGCACCCGGACGGCAACTC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCAGAGCACAGCAGTATaGCCGGAACATCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQQSTAV*PEHLHS
Trigger: GCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCAGAGCACAGCAGTATaGCCGGAACATCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFQSTAV*PEHLHS
Trigger: GCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTGCAACGTCAGCCTGCTaGAGTGAAACTCAACCACGA +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFATSAC*SETQPR
Trigger: TCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGC...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCAGGCAACGTCAGCCTaGTGCAGTGAAACTCAACCA +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGQATSA*CSETQP
Trigger: TGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGATGCTGTATATGCTGTaGCTTGGGGGACCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILMLYML*LGGPPE
Trigger: CTCTGGGGGTCCCCCAAGGCACAGCATATACAGCAT...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCAGCGCACTTCCCGCTaGCCTTCTCCACTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDQRTSR*PSPLAA
Trigger: AGCAGCCAGTGGAGAAGGGCAGCGGGAAGTGCGCTG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAAGTTCCAGACACTCGTaGCAACTAGACAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGSSRHS*QLDRWR
Trigger: CCTCCATCTGTCTAGTTGCCACGAGTGTCTGGAACT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGATCGTAGGGAAGGTCTaGAATGTTCTCGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGIVGKV*NVLGRR
Trigger: GCGTCTGCCGAGAACATTCCAGACCTTCCCTACGAT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAGGAGACGCATCGTTGTaGGGGTCACTTCGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTGDASL*GSLRQT
Trigger: TGTTTGCCGAAGTGACCCCCACAACGATGCGTCTCC...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGACGGACATCAGATGCTaGACAAACGGGATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVTDIRC*TNGILC
Trigger: ACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGT...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAACGGACATCAGATGCTaGACAAACGGGATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGTDIRC*TNGILC
Trigger: ACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCCCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGGGCTGTCCTGTGCCTaGCTAAAGGTAGACAGACTA +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLGLSCA*LKVDRL
Trigger: TAGTCTGTCTACCTTTAGCCAGGCACAGGACAGCCC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGGGGCTGTCCTGTGCCTaGCTAAAGGTAGACAGACTA +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGGLSCA*LKVDRL
Trigger: TAGTCTGTCTACCTTTAGCCAGGCACAGGACAGCCC...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGGGAGGAGCGCCTGCTaGAAAGCACAGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFGRSAC*KAQSTA
Trigger: TGCTGTGCTCTGTGCTTTCCAGCAGGCGCTCCTCCC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTGCCTTCAAGCAGCGCTaGGTGCTCCGATCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPAFKQR*VLRSKQ
Trigger: CTGCTTTGATCGGAGCACCCAGCGCTGCTTGAAGGC...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATACCACCCCCAGCTTGCTaGAGTTGTCCACACTTGCTT +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIPPPAC*SCPHLL
Trigger: AAGCAAGTGTGGACAACTTCAGCAAGCTGGGGGTGG...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAAGACGCAAACTTGACTaGCTCAATGGTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGRRKLD*LNGAVL
Trigger: GAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCACCGTCCACGGGTCTCTaGGAGCACTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSPSTGL*EHCPPA
Trigger: TGCTGGAGGACAGTGCTCTCAGAGACCCGTGGACGG...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTACCAAAGGTGAAGGATaGAGACAGGCCCAACACCTT +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFTKGEG*RQAQHL
Trigger: AAGGTGTTGGGCCTGTCTTCATCCTTCACCTTTGGT...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAACCAAAGGTGAAGGATaGAGACAGGCCCAACACCTT +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGTKGEG*RQAQHL
Trigger: AAGGTGTTGGGCCTGTCTTCATCCTTCACCTTTGGT...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAGAAAGCCACCAAAGGTaGAGGATGAAGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTESHQR*RMKTGP
Trigger: TGGGCCTGTCTTCATCCTTCACCTTTGGTGGCTTTC...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTGTTTCATGTCACAGCTaGGGCCAAGGGTTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFVSCHS*GQGLSE
Trigger: TTCTGACAACCCTTGGCCTCAGCTGTGACATGAAAC...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTGATTTCCTCCGCAGCTaGCAGCAAGTAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFDFLRS*QQVKRS
Trigger: ACTCCTCTTTACTTGCTGTCAGCTGCGGAGGAAATC...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGGATTTCCTCCGCAGCTaGCAGCAAGTAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQDFLRS*QQVKRS
Trigger: ACTCCTCTTTACTTGCTGTCAGCTGCGGAGGAAATC...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATTCTCCCATGAGTGTTaGGTTAACCAGAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGFSHEC*VNQNSA
Trigger: GGCGGAGTTCTGGTTAACTCAACACTCATGGGAGAA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTTCACGACTCTGGCGATaGGATAATCGGCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFSRLWR*DNRLLR
Trigger: CCTTAAGAGCCGATTATCTCATCGCCAGAGTCGTGA...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTTCGCCGCCCTCCTGGTaGACCTGGAGGAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSSPPSW*TWRKPE
Trigger: TTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGA...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGTCTTCTATATTCCGTaGGCTGCACAGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGVFYIP*AAQSCR
Trigger: CCTGCAAGACTGTGCAGCTCACGGAATATAGAAGAC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGACTGAGTCTCCTGCGTaGGGGAGGAGCGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQTESPA*GRSACW
Trigger: CCAGCAGGCGCTCCTCCCTCACGCAGGAGACTCAGT...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGATTCAGAGTGGAGTCCTaGAAGTGCACCGACACAATC +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARFRVES*KCTDTI
Trigger: GATTGTGTCGGTGCACTTGCAGGACTCCACTCTGAA...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCCTTTGGGTCATCTCTaGCAACATGCTCCATACCGT +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFPLGHL*QHAPYR
Trigger: ACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCACACTCCCAGAGGCACTaGCTCTCCTTTGTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPHSQRH*LSFVWV
Trigger: AACCCAAACAAAGGAGAGGCAGTGCCTCTGGGAGTG...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGTGTGCAGTGCACCCTTaGTTGTCACCTGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILCAVHP*LSPESH
Trigger: GTGGCTTTCAGGTGACAAGCAAGGGTGCACTGCACA...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGGCCTTCCTGGTACCTaGAGCCACTGCTCAAGACGC +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCGLPGT*SHCSRR
Trigger: GCGTCTTGAGCAGTGGCTGCAGGTACCAGGAAGGCC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAGGAGGTAGTTCTAAGTaGACCTGGCAAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGGGSSK*TWQRTA
Trigger: AGCTGTTCTTTGCCAGGTGCACTTAGAACTACCTCC...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGGGAATGGACCTCACTaGTTCCACGACAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAGNGPH*FHDSHG
Trigger: TCCGTGGCTGTCGTGGAAGCAGTGAGGTCCATTCCC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTCACCTTTGGTCCCTCTaGGCTGCCCAGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFHLWSL*AAQMDL
Trigger: CAAGTCCATCTGGGCAGCGCAGAGGGACCAAAGGTG...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGCATGTCGAAGGAGTTaGCGTCCGGGTGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFACRRS*RPGAQS
Trigger: TGACTGTGCACCCGGACGGCAACTCCTTCGACATGC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGACTATATTCCGTGAGCTaGACAGTCTTGCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGLYSVS*TVLQEC
Trigger: GCATTCCTGCAAGACTGTGCAGCTCACGGAATATAG...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGTCTTTTAAAGCTATGTaGGCACACACGCACGCACAC +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVSFKAM*AHTHAH
Trigger: GTGTGCGTGCGTGTGTGCGCACATAGCTTTAAAAGA...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGGGAAAACGCAGCATCTaGTTCAAGGCTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVGKRSI*FKAASS
Trigger: AGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCC...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATACTTGAGATCCCAGGTTaGGGGGTGCATAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSILEIPG*GVHKWP
Trigger: GGGCCATTTATGCACCCCGCAACCTGGGATCTCAAG...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTTGCTCCCCCGACCTGTaGACCCGCACCCCAGTCGGC +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPCSPDL*TRTPVG
Trigger: GCCGACTGGGGTGCGGGTGCACAGGTCGGGGGAGCA...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATGCGCTCTGTGGCCTGTaGTCCCCCGACCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHALCGL*SPDLCT
Trigger: GGTGCACAGGTCGGGGGAGCACAGGCCACAGAGCGC...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACCGAGACCACACCACTaGACTCCAGCCTGGACGACA +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLPRPHH*TPAWTT
Trigger: TGTCGTCCAGGCTGGAGTGCAGTGGTGTGGTCTCGG...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGATCGTAGGGAAGGTCTaGAATGTTCTCGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILIVGKV*NVLGRR
Trigger: GCGTCTGCCGAGAACATTCCAGACCTTCCCTACGAT...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCGCTCTGGTCAGCCTTaGAGAAAACCAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQRSGQP*RKPSSG
Trigger: TCCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCGCTCTGGTCAGCCTTaGAGAAAACCAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGRSGQP*RKPSSG
Trigger: TCCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTCGGACGGGGCCTTCCTaGTACCTGCAGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIRTGPS*YLQPLL
Trigger: GAGCAGTGGCTGCAGGTACCAGGAAGGCCCCGTCCG...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGAGTTCTAAGTGCACCTaGCAAAGAACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVSSKCT*QRTASP
Trigger: GGGAGAAGCTGTTCTTTGCCAGGTGCACTTAGAACT...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGGAGACGCATCGTTGTaGGGGTCACTTCGGCAAACA +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIGDASL*GSLRQT
Trigger: TGTTTGCCGAAGTGACCCCCACAACGATGCGTCTCC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCAGCTGGGATCTCAGTaGAATGGAGATGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFQLGSQ*NGDEQS
Trigger: ACTCTGCTCATCTCCATTCCACTGAGATCCCAGCTG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGACAGCTGGGATCTCAGTaGAATGGAGATGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGQLGSQ*NGDEQS
Trigger: ACTCTGCTCATCTCCATTCCACTGAGATCCCAGCTG...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAARFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTAACTCACCACTGGCCTaGGCGCAAGAGCATATTTTG +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFNSPLA*AQEHIL
Trigger: CAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTT...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCATGCGGGGTGCATAAATaGCCCAAATCGGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPCGVHK*PKSESV
Trigger: CACACTCTCCGATTTGGGCCATTTATGCACCCCGCA...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGTGCGGGGTGCATAAATaGCCCAAATCGGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILCGVHK*PKSESV
Trigger: CACACTCTCCGATTTGGGCCATTTATGCACCCCGCA...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGAAGTCTTCAATGGACTaGCTGTCGCTGACGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQKSSMD*LSLTQK
Trigger: CTTCTGCGTCAGCGACAGCCAGTCCATTGAAGACTT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCCACTGCACTCCAGCCTaGACGACAGAACGACACTCC +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAHCTPA*TTERHS
Trigger: GGAGTGTCGTTCTGTCGTCCAGGCTGGAGTGCAGTG...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGATGGATGGAGCAAGGCTaGAAACGCAGAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGWMEQG*KRRGKE
Trigger: TTCTTTACCTCTGCGTTTCCAGCCTTGCTCCATCCA...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAAAGCTAAGGAAGCCCTaGCTGTCCCTAAACAAAGGA +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGKLRKP*LSLNKG
Trigger: TCCTTTGTTTAGGGACAGCCAGGGCTTCCTTAGCTT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGTCTTCAATGGATTCTaGGGCCGAAACGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCVFNGF*GRNAAA
Trigger: AGCGGCCGCGTTTCGGCCTCAGAATCCATTGAAGAC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000675057.1
CDS-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTGGAGTCTATCTTCCATaGACGCCACCCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVGVYLP*TPPPAC
Trigger: GCAAGCTGGGGGTGGCGTTCATGGAAGATAGACTCC...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGGAGTCTATCTTCCATaGACGCCACCCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCGVYLP*TPPPAC
Trigger: GCAAGCTGGGGGTGGCGTTCATGGAAGATAGACTCC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCTGGGCTTGCTTGTTTaGGACCTGATCCTTAACTTC +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQLGLLV*DLILNF
Trigger: GAAGTTAAGGATCAGGTCTCAAACAAGCAAGCCCAG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCAGACGCAAACTTGACTaGCTCAATGGTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLRRKLD*LNGAVL
Trigger: GAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCT...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAAGACGCAAACTTGACTaGCTCAATGGTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGRRKLD*LNGAVL
Trigger: GAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCT...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATACGGCAGACGCAAACTTaGCTGACTCAATGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIRQTQT*LTQWCC
Trigger: ACAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCG...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGCCGTCCACGGGTCTCTaGGAGCACTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQPSTGL*EHCPPA
Trigger: TGCTGGAGGACAGTGCTCTCAGAGACCCGTGGACGG...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GCTGTTGGGCCCTTTGTCCTGAAACTCTTTGATCAGTTTCTCCAGCACAGTCACGAAAGCCACCAAAGGTaGAGGATGAAGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AVGPFVLKLFDQFLQHSHESHQR*RMKTGP
Trigger: TGGGCCTGTCTTCATCCTTCACCTTTGGTGGCTTTC...GTGACTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCACTGCTCAAGACGCTaGGCTTCACCTCGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCHCSRR*ASPRSG
Trigger: ACCAGAGCGAGGTGAAGCTCAGCGTCTTGAGCAGTG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACGATAGATCTCTAAGTTaGAATGTTCTGATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALLVNLEEARIVQANDGHDRSLS*NVLMRR
Trigger: CCTTCTCATCAGAACATTTCAACTTAGAGATCTATC...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGTTCTCCCATGAGTGTTaGGTTAACCAGAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILFSHEC*VNQNSA
Trigger: GGCGGAGTTCTGGTTAACTCAACACTCATGGGAGAA...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCCGTTTGGGGAGGATaGGGTTTCTCAGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAAVWGG*GFSACR
Trigger: TCGACATGCTGAGAAACCTCATCCTCCCCAAACGGC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGATTTCTGGAATTAGCCTaGCTGGGTAAGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGFLELA*LGKTWI
Trigger: TATCCAGGTCTTACCCAGTCAGGCTAATTCCAGAAA...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTCTCTCAGGACAACTaGGTCTCCTGCGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLLSQDN*VSCVRE
Trigger: CTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAG...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGGCTCTCCGTCACAAATaGTATGTGTTCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVALRHK*YVFCFK
Trigger: CTTGAAGCAGAACACATAGCATTTGTGACGGAGAGC...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGTGCTCCATACCGTCCTaGTCAGGCTTAATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQCSIPS*SGLISR
Trigger: TCTTGAGATTAAGCCTGAGCAGGACGGTATGGAGCA...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATGCTCCATACCGTCCTaGTCAGGCTTAATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGCSIPS*SGLISR
Trigger: TCTTGAGATTAAGCCTGAGCAGGACGGTATGGAGCA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATCATCTCTGCCAACATaGTCCATACCGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTSSLPT*SIPSCS
Trigger: TGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGA...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCCACGGACATCAGATaGTGGACAAACGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAATDIR*WTNGIL
Trigger: GAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGGGAATGGACCTCACTaGTTCCACGACAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCGNGPH*FHDSHG
Trigger: TCCGTGGCTGTCGTGGAAGCAGTGAGGTCCATTCCC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTTTGGTCCCTCTGCGCTaGCCAGATGGACTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCLVPLR*PDGLAD
Trigger: GTCAGCAAGTCCATCTGGGCAGCGCAGAGGGACCAA...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTATTGGTCCCTCTGCGCTaGCCAGATGGACTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLLVPLR*PDGLAD
Trigger: GTCAGCAAGTCCATCTGGGCAGCGCAGAGGGACCAA...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATTTGGTCCCTCTGCGCTaGCCAGATGGACTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDLVPLR*PDGLAD
Trigger: GTCAGCAAGTCCATCTGGGCAGCGCAGAGGGACCAA...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGAGTTGCCGTCCGGGTaGACAGTCACAACCTCGCCG +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQELPSG*TVTTSP
Trigger: CGGCGAGGTTGTGACTGTGCACCCGGACGGCAACTC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGACAGTACCTCCCCAGATaGTTACAAACAGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGQYLPR*LQTVIA
Trigger: TGCTATCACTGTTTGTAAGCATCTGGGGAGGTACTG...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATCTTTTAAAGCTATGTaGGCACACACGCACGCACAC +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGSFKAM*AHTHAH
Trigger: GTGTGCGTGCGTGTGTGCGCACATAGCTTTAAAAGA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGATCCCTGATGATATTCTaGAGATGCCCTCTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARSLMIF*RCPLKG
Trigger: ACCCTTGAGAGGGCATCTGCAGAATATCATCAGGGA...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATCCCTGATGATATTCTaGAGATGCCCTCTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGSLMIF*RCPLKG
Trigger: ACCCTTGAGAGGGCATCTGCAGAATATCATCAGGGA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCATCTGCTTCAAGGCTaGTTCATCTCTCTCAGGACA +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFHLLQG*FISLRT
Trigger: TGTCCTGAGAGAGATGAAGCAGCCTTGAAGCAGATG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGAGACGTCTGGCTCCTaGACAGCGCACTTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQETSGS*TAHFPL
Trigger: CAGCGGGAAGTGCGCTGTGCAGGAGCCAGACGTCTC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612277.4
CDS-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGACCGACACAATCTTTTaGGGTACCAGTCCATTATCC +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVTDTIF*GTSPLS
Trigger: GGATAATGGACTGGTACCCCAAAAGATTGTGTCGGT...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTCGGCTCTAGGATCTaGGCTTGCTTGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTFGSRI*ACLFET
Trigger: GGTCTCAAACAAGCAAGCCCAGATCCTAGAGCCGAA...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGTTCACCAAGAGCCTTTaGGTCATCTCTGCCAACATG +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGFTKSL*VISANM
Trigger: CATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAA...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGTGCCTCTCCTTTGTTTaGGTTCTTCACCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGCLSFV*VLHQEP
Trigger: AGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCA...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAAGTTCCAGACACTCGTaGCAACTAGACAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTSSRHS*QLDRWR
Trigger: CCTCCATCTGTCTAGTTGCCACGAGTGTCTGGAACT...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAATCGTAGGGAAGGTCTaGAATGTTCTCGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIIVGKV*NVLGRR
Trigger: GCGTCTGCCGAGAACATTCCAGACCTTCCCTACGAT...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACACGCTCTGGTCAGCCTTaGAGAAAACCAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTRSGQP*RKPSSG
Trigger: TCCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCG...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCAGTTCTAAGTGCACCTaGCAAAGAACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLSSKCT*QRTASP
Trigger: GGGAGAAGCTGTTCTTTGCCAGGTGCACTTAGAACT...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGGAGTTTGCACTATGTTaGAGCTGGGAGGTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVEFALC*SWEVVL
Trigger: TAGAACTACCTCCCAGCTCCAACATAGTGCAAACTC...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGAGAAGGCCTCCATGTTaGTCACCACAGGTATACAAG +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQRRPPC*SPQVYK
Trigger: CTTGTATACCTGTGGTGACCAACATGGAGGCCTTCT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGAGAAGGCCTCCATGTTaGTCACCACAGGTATACAAG +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGRRPPC*SPQVYK
Trigger: CTTGTATACCTGTGGTGACCAACATGGAGGCCTTCT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCTTTCCCCAACTGCTTaGTCTGCAGATTTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFLSPTA*SADFGD
Trigger: ATCGCCAAAATCTGCAGACCAAGCAGTTGGGGAAAG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCCAACTGCTTaGTCTGCAGATTTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGLSPTA*SADFGD
Trigger: ATCGCCAAAATCTGCAGACCAAGCAGTTGGGGAAAG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACACAGCTGGGATCTCAGTaGAATGGAGATGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTQLGSQ*NGDEQS
Trigger: ACTCTGCTCATCTCCATTCCACTGAGATCCCAGCTG...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTATCCTCTGTCCCAGCTaGGATCTCAGTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPILCPS*DLSGME
Trigger: CTCCATTCCACTGAGATCCCAGCTGGGACAGAGGAT...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAATCCTCTGTCCCAGCTaGGATCTCAGTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIILCPS*DLSGME
Trigger: CTCCATTCCACTGAGATCCCAGCTGGGACAGAGGAT...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTCCTGATACTCGGGAATaGACCTCACTGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPPDTRE*TSLLPR
Trigger: TCGTGGAAGCAGTGAGGTCCATTCCCGAGTATCAGG...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCGTCCAGGCCAACGATaGACACCTTTGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGRPGQR*TPLVPL
Trigger: CAGAGGGACCAAAGGTGTCCATCGTTGGCCTGGACG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTCCTCTAACTCACCACTaGCCTGGGCGCAAGAGCATA +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFPLTHH*PGRKSI
Trigger: TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGG...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGGCCACACCACCGGGTaGACAGTAACTCTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAGHTTG*TVTLGS
Trigger: ACTTCCAAGAGTTACTGTCCACCCGGTGGTGTGGCC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGGAGATAGGAGGGACATaGAAAAGGCATGGCGTACAT +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQEIGGT*KRHGVH
Trigger: ATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTC...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAAACCCGTTACCAGCCTaGAAGGGAGGATATCTTGCC +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSINPLPA*KGGYLA
Trigger: GGCAAGATATCCTCCCTTCCAGGCTGGTAACGGGTT...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTGGAGGCCGAGACAGGTaGATCACGAGGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVGGRDR*ITRSGV
Trigger: AACTCCTGACCTCGTGATCCACCTGTCTCGGCCTCC...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTGTGGTCCATGAGCCATaGACCATGCAAACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPVVHEP*TMQTPS
Trigger: TGAAGGCGTTTGCATGGTCCATGGCTCATGGACCAC...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCCACCCCCAGCTTGCTaGAGTTGTCCACACTTGCTT +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCPPPAC*SCPHLL
Trigger: AAGCAAGTGTGGACAACTTCAGCAAGCTGGGGGTGG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTGGAGTCTATCTTCCATaGACGCCACCCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFGVYLP*TPPPAC
Trigger: GCAAGCTGGGGGTGGCGTTCATGGAAGATAGACTCC...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAGAGAAAGATAGGCCATaGACTTCTGGTACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSAREKDRP*TSGTGL
Trigger: AAGACCTGTACCAGAAGTTCATGGCCTATCTTTCTC...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCACACTGCTCAAGACGCTaGGCTTCACCTCGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSHCSRR*ASPRSG
Trigger: ACCAGAGCGAGGTGAAGCTCAGCGTCTTGAGCAGTG...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATCACGACTCTGGCGATaGGATAATCGGCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSISRLWR*DNRLLR
Trigger: CCTTAAGAGCCGATTATCTCATCGCCAGAGTCGTGA...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGTGTCCTGAAACTCTTTaGTCAGTTTCTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQCPETL*SVSPAQ
Trigger: CTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACA...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GGACTTGCTGACCACTGTGGACCCAGTATCGGTAATAAAGGGGAAGGACGCTGTTTGGGCCCTTTGTCCTaGAACTCTTTGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GLADHCGPSIGNKGEGRCLGPLS*NSLISF
Trigger: GAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAA...ACAGCGTCCTTCCCCTTTATTACCGATACTGGGTCCACAGTGGTCAGCAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCTTGGGCCCTTTGTCCTaGAACTCTTTGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLLGPLS*NSLISF
Trigger: GAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAA...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCCCAGATGGACTTGCTaGCCACTGTGGACCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDPRWTC*PLWTQY
Trigger: ATACTGGGTCCACAGTGGTCAGCAAGTCCATCTGGG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCCCAGATGGACTTGCTaGCCACTGTGGACCCAGTAT +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCPRWTC*PLWTQY
Trigger: ATACTGGGTCCACAGTGGTCAGCAAGTCCATCTGGG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCCCAGATGGACTTGCTaGCCACTGTGGACCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGPRWTC*PLWTQY
Trigger: ATACTGGGTCCACAGTGGTCAGCAAGTCCATCTGGG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATTCGCCGCCCTCCTGGTaGACCTGGAGGAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHSPPSW*TWRKPE
Trigger: TTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGA...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAGGAGAGCTCACTGAATaGTGTCAAAGTAATGAACTG +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGGELTE*CQSNEL
Trigger: CAGTTCATTACTTTGACATCATTCAGTGAGCTCTCC...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTA +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGTSSSK*CLIRHL
Trigger: TAAATGTCTGATTAGGCATCACTTGGATGAGGAGGT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGTCTTCTATATTCCGTaGGCTGCACAGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIVFYIP*AAQSCR
Trigger: CCTGCAAGACTGTGCAGCTCACGGAATATAGAAGAC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATTTCTGGAATTAGCCTaGCTGGGTAAGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGFLELA*LGKTWI
Trigger: TATCCAGGTCTTACCCAGTCAGGCTAATTCCAGAAA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTACTGAGTCTCCTGCGTaGGGGAGGAGCGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPTESPA*GRSACW
Trigger: CCAGCAGGCGCTCCTCCCTCACGCAGGAGACTCAGT...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGATAGAAGCGGAGTTTTaGGAGTCTTTGGTTCATGTG +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVIEAEF*ESLVHV
Trigger: CACATGAACCAAAGACTCTCAAAACTCCGCTTCTAT...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAATAGAAGCGGAGTTTTaGGAGTCTTTGGTTCATGTG +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGIEAEF*ESLVHV
Trigger: CACATGAACCAAAGACTCTCAAAACTCCGCTTCTAT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGACTTTAAAGCTCCTTaGGATCCCAGGTTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAADFKAP*DPRLRG
Trigger: ACCCCGCAACCTGGGATCTCAAGGAGCTTTAAAGTC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GGACTTGCTGACCACTGTGGACCCAGTATCGGTAATAAAGGGGAAGGACGCTGTGCTCTCCGTCACAAATaGTATGTGTTCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GLADHCGPSIGNKGEGRCALRHK*YVFCFK
Trigger: CTTGAAGCAGAACACATAGCATTTGTGACGGAGAGC...ACAGCGTCCTTCCCCTTTATTACCGATACTGGGTCCACAGTGGTCAGCAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGCTCTCCGTCACAAATaGTATGTGTTCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGALRHK*YVFCFK
Trigger: CTTGAAGCAGAACACATAGCATTTGTGACGGAGAGC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAAAGGATCCCCAGGTCTaGAAGCTAATGGCAAACAAC +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPKDPQV*KLMANN
Trigger: GTTGTTTGCCATTAGCTTGCAGACCTGGGGATCCTT...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTCCTTTGGGTCATCTCTaGCAACATGCTCCATACCGT +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPPLGHL*QHAPYR
Trigger: ACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGG...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGCAACACTCTCCAAACTaGTGCTATAATCGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVQHSPN*CYNRRE
Trigger: TTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTG...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGAGGAGGATGTTGGGTaGCTTTCCCGTGAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCEEDVG*LSREVD
Trigger: GTCAACCTCACGGGAAAGGCACCCAACATCCTCCTC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGAGGAGGATGTTGGGTaGCTTTCCCGTGAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDEEDVG*LSREVD
Trigger: GTCAACCTCACGGGAAAGGCACCCAACATCCTCCTC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCTGTGCAGTGCACCCTTaGTTGTCACCTGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAACAVHP*LSPESH
Trigger: GTGGCTTTCAGGTGACAAGCAAGGGTGCACTGCACA...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTGTGCAGTGCACCCTTaGTTGTCACCTGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFCAVHP*LSPESH
Trigger: GTGGCTTTCAGGTGACAAGCAAGGGTGCACTGCACA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGTTCCAAAAGGCACATaGACAATCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGVPKGT*TIILSL
Trigger: CAAGGACAGGATGATTGTGCATGTGCCTTTTGGAAC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGAAATCTTCTGGAGTTTaGACTATGTTGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVKSSGV*TMLELG
Trigger: TCCCAGCTCCAACATAGTGCAAACTCCAGAAGATTT...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTTGTTTCCCAAGCCACTaGATAAGAGGATCCCTGATT +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFCFPSH*IRGSLI
Trigger: AATCAGGGATCCTCTTATGCAGTGGCTTGGGAAACA...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCACCTTTGGTCCCTCTaGGCTGCCCAGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFHLWSL*AAQMDL
Trigger: CAAGTCCATCTGGGCAGCGCAGAGGGACCAAAGGTG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGACAGTACCTCCCCAGATaGTTACAAACAGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGQYLPR*LQTVIA
Trigger: TGCTATCACTGTTTGTAAGCATCTGGGGAGGTACTG...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCCATAGGGCTGTCCTGTaGCTGGCTAAAGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAHRAVL*LAKGRQ
Trigger: CTGTCTACCTTTAGCCAGGCACAGGACAGCCCTATG...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCCATCTGCTTCAAGGCTaGTTCATCTCTCTCAGGACA +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSHLLQG*FISLRT
Trigger: TGTCCTGAGAGAGATGAAGCAGCCTTGAAGCAGATG...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCCCCAGTCGGCCACTTaGTCTCACATCAGGCAACGT +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFPQSAT*SHIRQR
Trigger: ACGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTCCCCAGTCGGCCACTTaGTCTCACATCAGGCAACGT +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSPQSAT*SHIRQR
Trigger: ACGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGG...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATATGCTGTATATGCTGTaGCTTGGGGGACCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDMLYML*LGGPPE
Trigger: CTCTGGGGGTCCCCCAAGGCACAGCATATACAGCAT...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCGACCATGCTGTATATaGTGTGCCTTGGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFRPCCI*CALGDP
Trigger: GGGGTCCCCCAAGGCACAGCATATACAGCATGGTCG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTCGACCATGCTGTATATaGTGTGCCTTGGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSRPCCI*CALGDP
Trigger: GGGGTCCCCCAAGGCACAGCATATACAGCATGGTCG...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCAACGGAAGCCCACCCTaGCTCCCTTTTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAANGSPP*LPFPSE
Trigger: TTCAGATGGAAAAGGGAGGCAGGGTGGGCTTCCGTT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTAACGGAAGCCCACCCTaGCTCCCTTTTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFINGSPP*LPFPSE
Trigger: TTCAGATGGAAAAGGGAGGCAGGGTGGGCTTCCGTT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTGCCTCTCCTTTGTTTaGGTTCTTCACCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSCLSFV*VLHQEP
Trigger: AGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCA...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTAGTTCCAGACACTCGTaGCAACTAGACAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPSSRHS*QLDRWR
Trigger: CCTCCATCTGTCTAGTTGCCACGAGTGTCTGGAACT...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTATCGTAGGGAAGGTCTaGAATGTTCTCGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFIVGKV*NVLGRR
Trigger: GCGTCTGCCGAGAACATTCCAGACCTTCCCTACGAT...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCATCCTCTGTCCCAGCTaGGATCTCAGTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAILCPS*DLSGME
Trigger: CTCCATTCCACTGAGATCCCAGCTGGGACAGAGGAT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGGGGAAGGACGCTGTTaGGCCCTTTGTCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCGEGRC*ALCPET
Trigger: AGTTTCAGGACAAAGGGCCCAACAGCGTCCTTCCCC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTCGTCCAGGCCAACGATaGACACCTTTGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSRPGQR*TPLVPL
Trigger: CAGAGGGACCAAAGGTGTCCATCGTTGGCCTGGACG...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFRFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTAACTCACCACTGGCCTaGGCGCAAGAGCATATTTTG +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPNSPLA*AQEHIL
Trigger: CAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTT...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AATCCACAGCCTGGACAAAAACAAACAATTGAGCAGCTCAGCCTGTTGATGGCAGGCCACACCACCGGGTaGACAGTAACTCTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: NPQPGQKQTIEQLSLLMAGHTTG*TVTLGS
Trigger: ACTTCCAAGAGTTACTGTCCACCCGGTGGTGTGGCC...TGCCATCAACAGGCTGAGCTGCTCAATTGTTTGTTTTTGTCCAGGCTGTGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGATCCTCCCTTGTATGTaGTATGAGTGTGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQILPCM*YECAFI
Trigger: GATGAAGGCACACTCATACCACATACAAGGGAGGAT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCGACATGGAAAAGGCATaGCGTACATCTGGGAATAGC +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSDMEKA*RTSGNS
Trigger: GCTATTCCCAGATGTACGCCATGCCTTTTCCATGTC...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTGGGCTGTCCTGTGCCTaGCTAAAGGTAGACAGACTA +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIGLSCA*LKVDRL
Trigger: TAGTCTGTCTACCTTTAGCCAGGCACAGGACAGCCC...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCTGCGGGGTGCATAAATaGCCCAAATCGGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAACGVHK*PKSESV
Trigger: CACACTCTCCGATTTGGGCCATTTATGCACCCCGCA...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTGTTCAAGTCTTCAATaGACGTGGCAAAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPCSSLQ*TWQRAR
Trigger: CCTGGCCCTTTGCCACGTCCATTGAAGACTTGAACA...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612277.4
CDS-3UTR CCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATCAAGGACAGCGCAGATaGCAGCGGAGGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHQGQRR*QRRHGS
Trigger: GCTCCCATGCCTCCGCTGCCATCTGCGCTGTCCTTG...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675307.1
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAAACAGTCTGACCACTTaGCAATCTTGGAAGGTTACT +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGNSLTT*QSWKVT
Trigger: AGTAACCTTCCAAGATTGTCAAGTGGTCAGACTGTT...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTGGAGTCTATCTTCCATaGACGCCACCCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIGVYLP*TPPPAC
Trigger: GCAAGCTGGGGGTGGCGTTCATGGAAGATAGACTCC...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCGGCAGACGCAAACTTaGCTGACTCAATGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVRQTQT*LTQWCC
Trigger: ACAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCG...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGAAAGCCACCAAAGGTaGAGGATGAAGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDESHQR*RMKTGP
Trigger: TGGGCCTGTCTTCATCCTTCACCTTTGGTGGCTTTC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGTTTCATGTCACAGCTaGGGCCAAGGGTTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFVSCHS*GQGLSE
Trigger: TTCTGACAACCCTTGGCCTCAGCTGTGACATGAAAC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGTTTCATGTCACAGCTaGGGCCAAGGGTTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAVSCHS*GQGLSE
Trigger: TTCTGACAACCCTTGGCCTCAGCTGTGACATGAAAC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTATTTCCTGCGGTGTCTaGAACATCAGCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCISCGV*NISPSR
Trigger: CCTGGATGGGCTGATGTTTCAGACACCGCAGGAAAT...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACTTCACTCGTAAGTTaGTATCCTGATACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQTSLVS*YPDTRE
Trigger: TTCCCGAGTATCAGGATATCAACTTACGAGTGAAGT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTACTTCACTCGTAAGTTaGTATCCTGATACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFTSLVS*YPDTRE
Trigger: TTCCCGAGTATCAGGATATCAACTTACGAGTGAAGT...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTTCTCCCATGAGTGTTaGGTTAACCAGAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFFSHEC*VNQNSA
Trigger: GGCGGAGTTCTGGTTAACTCAACACTCATGGGAGAA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCTCACGACTCTGGCGATaGGATAATCGGCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAASRLWR*DNRLLR
Trigger: CCTTAAGAGCCGATTATCTCATCGCCAGAGTCGTGA...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTA +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQTSSSK*CLIRHL
Trigger: TAAATGTCTGATTAGGCATCACTTGGATGAGGAGGT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGCATCTCCATAGCCTTTaGCAAGGCCACACTTCATTA +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILHLHSL*QGHTSL
Trigger: TAATGAAGTGTGGCCTTGTCAAAGGCTATGGAGATG...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAATAGAAGCGGAGTTTTaGGAGTCTTTGGTTCATGTG +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGIEAEF*ESLVHV
Trigger: CACATGAACCAAAGACTCTCAAAACTCCGCTTCTAT...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGCCTCAAGAGTCCCCTTaGAACCCGTTACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQPQESP*NPLPAW
Trigger: CCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGG...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGTCAGCCTGCTGCAGTaGAACTCAACCACGATTTTC +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAVSLLQ*NSTTIF
Trigger: GAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGAC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGAACAGTCTGACCACTTaGCAATCTAAGTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGNSLTT*QSKCIS
Trigger: GGAAATGCACTTAGATTGTCAAGTGGTCAGACTGTT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR TCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAAGCAGCTCAGCCTGTTaGTGGCATCACACATTCCTC +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLSSSAC*WHHTFL
Trigger: GAGGAATGTGTGATGCCATCAACAGGCTGAGCTGCT...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCACTTTGTACCCAAATaGTCTCCGTCACAAATGCTA +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFHFVPK*SPSQML
Trigger: TAGCATTTGTGACGGAGAGCATTTGGGTACAAAGTG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTAAGGATCCCCAGGTCTaGAAGCTAATGGCAAACAAC +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPKDPQV*KLMANN
Trigger: GTTGTTTGCCATTAGCTTGCAGACCTGGGGATCCTT...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCCACTCTCCAAACTGCTaGTATAATCGTAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSHSPNC*YNRREG
Trigger: ACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTG...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCGACTGTCTTGTGCAGTaGACCCTTGCTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGDCLVQ*TLACHL
Trigger: CAGGTGACAAGCAAGGGTGCACTGCACAAGACAGTC...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAGACTGTCTTGTGCAGTaGACCCTTGCTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLDCLVQ*TLACHL
Trigger: CAGGTGACAAGCAAGGGTGCACTGCACAAGACAGTC...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGGAGGTAGTTCTAAGTaGACCTGGCAAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIGGSSK*TWQRTA
Trigger: AGCTGTTCTTTGCCAGGTGCACTTAGAACTACCTCC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTGGAGGTAGTTCTAAGTaGACCTGGCAAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPGGSSK*TWQRTA
Trigger: AGCTGTTCTTTGCCAGGTGCACTTAGAACTACCTCC...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGTGTTTCCCAAGCCACTaGATAAGAGGATCCCTGATT +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILCFPSH*IRGSLI
Trigger: AATCAGGGATCCTCTTATGCAGTGGCTTGGGAAACA...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAATTACTTTCCCCAACTaGTTGGTCTGCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARITFPN*LVCRFW
Trigger: CCAAAATCTGCAGACCAAGCAGTTGGGGAAAGTAAT...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCATTACTTTCCCCAACTaGTTGGTCTGCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLITFPN*LVCRFW
Trigger: CCAAAATCTGCAGACCAAGCAGTTGGGGAAAGTAAT...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATACTATATTCCGTGAGCTaGACAGTCTTGCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSILYSVS*TVLQEC
Trigger: GCATTCCTGCAAGACTGTGCAGCTCACGGAATATAG...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCATAGGGCTGTCCTGTaGCTGGCTAAAGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCHRAVL*LAKGRQ
Trigger: CTGTCTACCTTTAGCCAGGCACAGGACAGCCCTATG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAATGATATTCTGCAGATaGCCTCTCAAGGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTMIFCR*PLKGKS
Trigger: GGACTTACCCTTGAGAGGGCATCTGCAGAATATCAT...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTCCCTGATGATATTCTaGAGATGCCCTCTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPSLMIF*RCPLKG
Trigger: ACCCTTGAGAGGGCATCTGCAGAATATCATCAGGGA...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTCATCTGCTTCAAGGCTaGTTCATCTCTCTCAGGACA +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPHLLQG*FISLRT
Trigger: TGTCCTGAGAGAGATGAAGCAGCCTTGAAGCAGATG...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCATCCCAGGTTGCGGGGTaGATAAATGGCCCAAATCGG +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSSQVAG*INGPNR
Trigger: CCGATTTGGGCCATTTATGCACCCCGCAACCTGGGA...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGGAAGGGAGGATATCTTaGCTTTTACAAAATACGGTC +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVEGRIS*LLQNTV
Trigger: GACCGTATTTTGTAAAAGGCAAGATATCCTCCCTTC...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCAGGCAACGTCAGCCTaGTGCAGTGAAACTCAACCA +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCQATSA*CSETQP
Trigger: TGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTAACGGAAGCCCACCCTaGCTCCCTTTTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCNGSPP*LPFPSE
Trigger: TTCAGATGGAAAAGGGAGGCAGGGTGGGCTTCCGTT...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGAATCTAAGAGAGAGCTaGCCGGATTTTATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGNLRES*PDFISP
Trigger: GGGAGAAATAAAATCCGGCCAGCTCTCTCTTAGATT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTAATCTAAGAGAGAGCTaGCCGGATTTTATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PAGKHRAQQYARNISIAFNLRES*PDFISP
Trigger: GGGAGAAATAAAATCCGGCCAGCTCTCTCTTAGATT...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCAATCTAAGAGAGAGCTaGCCGGATTTTATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLNLRES*PDFISP
Trigger: GGGAGAAATAAAATCCGGCCAGCTCTCTCTTAGATT...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCACGGACATCAGATGCTaGACAAACGGGATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAATDIRC*TNGILC
Trigger: ACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCCTGATACTCGGGAATaGACCTCACTGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDPDTRE*TSLLPR
Trigger: TCGTGGAAGCAGTGAGGTCCATTCCCGAGTATCAGG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTAACGATGGACACCTTTaGTCCCTCTGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFINDGHL*SLCAAQ
Trigger: CTGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGTGGACAGTAACTCTTaGAAGTCTGTCTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGVDSNS*KSVFPF
Trigger: AAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCAC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGAATTTCAGCTGGGACTaGAAGAGAGAAAACTGGACA +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQNFSWD*KRENWT
Trigger: TGTCCAGTTTTCTCTCTTCCAGTCCCAGCTGAAATT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCAATTTCAGCTGGGACTaGAAGAGAGAAAACTGGACA +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLNFSWD*KRENWT
Trigger: TGTCCAGTTTTCTCTCTTCCAGTCCCAGCTGAAATT...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGTCCACTAATTTCAGCTaGGACTGGAAGAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGSTNFS*DWKREN
Trigger: GTTTTCTCTCTTCCAGTCCCAGCTGAAATTAGTGGA...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCGGGCTGTCCTGTGCCTaGCTAAAGGTAGACAGACTA +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGGLSCA*LKVDRL
Trigger: TAGTCTGTCTACCTTTAGCCAGGCACAGGACAGCCC...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGGCAAAATCAGGTTTATaGAAAACGCAGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVAKSGL*KTQHLL
Trigger: AAGCAGATGCTGCGTTTTCCATAAACCTGATTTTGC...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCAACCCGTTACCAGCCTaGAAGGGAGGATATCTTGCC +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGNPLPA*KGGYLA
Trigger: GGCAAGATATCCTCCCTTCCAGGCTGGTAACGGGTT...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATAACCCGTTACCAGCCTaGAAGGGAGGATATCTTGCC +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDNPLPA*KGGYLA
Trigger: GGCAAGATATCCTCCCTTCCAGGCTGGTAACGGGTT...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCAAGAGCAAACAGATCTaGAGAACGGAAGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAKSKQI*RTEAHP
Trigger: AGGGTGGGCTTCCGTTCTCCAGATCTGTTTGCTCTT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTCCCAACAGGGGGCATTaGCAGGCAGCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPPNRGH*QAAALQ
Trigger: CTGCAGAGCTGCTGCCTGCCAATGCCCCCTGTTGGG...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCGTTTTCTAGGAGCGTaGTCCATGAGCCATGGACCA +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCRFLGA*SMSHGP
Trigger: TGGTCCATGGCTCATGGACCACGCTCCTAGAAAACG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATGTTCAAGTCTTCAATaGACTGCAGGCCTGATACCG +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSICSSLQ*TAGLIP
Trigger: CGGTATCAGGCCTGCAGTCCATTGAAGACTTGAACA...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675307.1
3UTR CAA 72 bp CAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTaGCACACAAATCCTTCCTACTTCCACCACTCCCTA +
Preference number: 4 (lower is better)
Translates to: QPAAVKLNHDFP*HTNPSYFHHSL
Trigger: TAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
CDS-3UTR TCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCATGCTTGTTTGAGACCTaGTCCTTAACTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPCLFET*SLTSFR
Trigger: TCTGAAGGAAGTTAAGGATCAGGTCTCAAACAAGCA...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTACCAAAGGTGAAGGATaGAGACAGGCCCAACACCTT +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCTKGEG*RQAQHL
Trigger: AAGGTGTTGGGCCTGTCTTCATCCTTCACCTTTGGT...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGATTTCCTCCGCAGCTaGCAGCAAGTAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDDFLRS*QQVKRS
Trigger: ACTCCTCTTTACTTGCTGTCAGCTGCGGAGGAAATC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAGATAGATCTCTAAGTTaGAATGTTCTGATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGDRSLS*NVLMRR
Trigger: CCTTCTCATCAGAACATTTCAACTTAGAGATCTATC...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGCTCCGCCGATCTTCATaGGGTCACTGTAATAAATAT +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILLRRSS*GHCNKY
Trigger: ATATTTATTACAGTGACCTCATGAAGATCGGCGGAG...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCACTCCGCCGATCTTCATaGGGTCACTGTAATAAATAT +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPLRRSS*GHCNKY
Trigger: ATATTTATTACAGTGACCTCATGAAGATCGGCGGAG...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTGGGCCCTTTGTCCTaGAACTCTTTGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSILGPLS*NSLISF
Trigger: GAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAA...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGTCAAAGTAATGAACTaGTTTCCTCTACAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLVKVMN*FPLQGH
Trigger: GTGACCTTGTAGAGGAAATCAGTTCATTACTTTGAC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGTCAAAGTAATGAACTaGTTTCCTCTACAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGVKVMN*FPLQGH
Trigger: GTGACCTTGTAGAGGAAATCAGTTCATTACTTTGAC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCTTGTATGTGGTATaGGTGTGCCTTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVPLYVV*VCLHLQ
Trigger: CTGGAGATGAAGGCACACTCATACCACATACAAGGG...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCCCTTGTATGTGGTATaGGTGTGCCTTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDPLYVV*VCLHLQ
Trigger: CTGGAGATGAAGGCACACTCATACCACATACAAGGG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGTCTTCTATATTCCGTaGGCTGCACAGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCVFYIP*AAQSCR
Trigger: CCTGCAAGACTGTGCAGCTCACGGAATATAGAAGAC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAATCCTCCCTCTGAACTaGTGGTGTTTAGTATCGATA +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPILPLN*WCLVSI
Trigger: TATCGATACTAAACACCATCAGTTCAGAGGGAGGAT...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAGATTTTGTTCAAAGCTaGAAGCTCCATCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGDFVQS*KLHQTF
Trigger: GAAAGTTTGATGGAGCTTTCAGCTTTGAACAAAATC...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTGACTTTAAAGCTCCTTaGGATCCCAGGTTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFDFKAP*DPRLRG
Trigger: ACCCCGCAACCTGGGATCTCAAGGAGCTTTAAAGTC...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGAAAAAGTTACAGTCTTaGCTGTCAACTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGKKLQS*LSTSSF
Trigger: GAAGGAGGAAGTTGACAGTCAAGACTGTAACTTTTT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGCTCTCCGTCACAAATaGTATGTGTTCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIALRHK*YVFCFK
Trigger: CTTGAAGCAGAACACATAGCATTTGTGACGGAGAGC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCCCTGGGCCACAAGGGTaGTCTTATGGTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAPGPQG*SYGSKI
Trigger: TATTTTGGAACCATAAGAGCACCCTTGTGGCCCAGG...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR GCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGGATCATCCATAAAGTaGCTGGGCCACAAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSGSSIK*LGHKGA
Trigger: AGCACCCTTGTGGCCCAGGCACTTTATGGATGATCC...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCAAGGATCCCCAGGTCTaGAAGCTAATGGCAAACAAC +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAKDPQV*KLMANN
Trigger: GTTGTTTGCCATTAGCTTGCAGACCTGGGGATCCTT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTAAGGATCCCCAGGTCTaGAAGCTAATGGCAAACAAC +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIKDPQV*KLMANN
Trigger: GTTGTTTGCCATTAGCTTGCAGACCTGGGGATCCTT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATTTCAGAGTGGAGTCCTaGAAGTGCACCGACACAATC +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDFRVES*KCTDTI
Trigger: GATTGTGTCGGTGCACTTGCAGGACTCCACTCTGAA...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTCATCTCTGCCAACATaGTCCATACCGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGSSLPT*SIPSCS
Trigger: TGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGA...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCCTTTGGGTCATCTCTaGCAACATGCTCCATACCGT +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGPLGHL*QHAPYR
Trigger: ACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACACAACACTCTCCAAACTaGTGCTATAATCGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTQHSPN*CYNRRE
Trigger: TTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTG...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGTTCCAAAAGGCACATaGACAATCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIVPKGT*TIILSL
Trigger: CAAGGACAGGATGATTGTGCATGTGCCTTTTGGAAC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCATTACTTTCCCCAACTaGTTGGTCTGCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSITFPN*LVCRFW
Trigger: CCAAAATCTGCAGACCAAGCAGTTGGGGAAAGTAAT...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGCCACGGACATCAGATaGTGGACAAACGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQATDIR*WTNGIL
Trigger: GAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATTTGGTCCCTCTGCGCTaGCCAGATGGACTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHLVPLR*PDGLAD
Trigger: GTCAGCAAGTCCATCTGGGCAGCGCAGAGGGACCAA...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTCTATATTCCGTGAGCTaGACAGTCTTGCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFLYSVS*TVLQEC
Trigger: GCATTCCTGCAAGACTGTGCAGCTCACGGAATATAG...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTCTTTTAAAGCTATGTaGGCACACACGCACGCACAC +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFSFKAM*AHTHAH
Trigger: GTGTGCGTGCGTGTGTGCGCACATAGCTTTAAAAGA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCATAGGGCTGTCCTGTaGCTGGCTAAAGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFHRAVL*LAKGRQ
Trigger: CTGTCTACCTTTAGCCAGGCACAGGACAGCCCTATG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCACATAGGGCTGTCCTGTaGCTGGCTAAAGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSHRAVL*LAKGRQ
Trigger: CTGTCTACCTTTAGCCAGGCACAGGACAGCCCTATG...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGGAAAACGCAGCATCTaGTTCAAGGCTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFGKRSI*FKAASS
Trigger: AGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGGAAAACGCAGCATCTaGTTCAAGGCTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAGKRSI*FKAASS
Trigger: AGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGTCCCAGGTTGCGGGGTaGATAAATGGCCCAAATCGG +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQSQVAG*INGPNR
Trigger: CCGATTTGGGCCATTTATGCACCCCGCAACCTGGGA...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGAAGGGAGGATATCTTaGCTTTTACAAAATACGGTC +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLEGRIS*LLQNTV
Trigger: GACCGTATTTTGTAAAAGGCAAGATATCCTCCCTTC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAGAAGGGAGGATATCTTaGCTTTTACAAAATACGGTC +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSAREGRIS*LLQNTV
Trigger: GACCGTATTTTGTAAAAGGCAAGATATCCTCCCTTC...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCGATTCTCCCATGTTCTaGCTGTTAAGAGCAAACAGA +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSDSPMF*LLRANR
Trigger: TCTGTTTGCTCTTAACAGGCAGAACATGGGAGAATC...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAACAAGGGTGCTCTTATaGTTCCAAAATATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGTRVLL*FQNIKS
Trigger: GGACTTTATATTTTGGAACCATAAGAGCACCCTTGT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTTTCGGCTCTAGGATCTaGGCTTGCTTGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCFGSRI*ACLFET
Trigger: GGTCTCAAACAAGCAAGCCCAGATCCTAGAGCCGAA...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTTTCACCAAGAGCCTTTaGGTCATCTCTGCCAACATG +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIFTKSL*VISANM
Trigger: CATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAA...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCGCTCTGGTCAGCCTTaGAGAAAACCAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCRSGQP*RKPSSG
Trigger: TCCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAGTTCTAAGTGCACCTaGCAAAGAACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFSSKCT*QRTASP
Trigger: GGGAGAAGCTGTTCTTTGCCAGGTGCACTTAGAACT...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGAGTTTGCACTATGTTaGAGCTGGGAGGTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIEFALC*SWEVVL
Trigger: TAGAACTACCTCCCAGCTCCAACATAGTGCAAACTC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGAATCTAAGAGAGAGCTaGCCGGATTTTATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILNLRES*PDFISP
Trigger: GGGAGAAATAAAATCCGGCCAGCTCTCTCTTAGATT...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCAGCTGGGATCTCAGTaGAATGGAGATGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDQLGSQ*NGDEQS
Trigger: ACTCTGCTCATCTCCATTCCACTGAGATCCCAGCTG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCACGGACATCAGATGCTaGACAAACGGGATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGTDIRC*TNGILC
Trigger: ACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGT...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATCGTCCAGGCCAACGATaGACACCTTTGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHRPGQR*TPLVPL
Trigger: CAGAGGGACCAAAGGTGTCCATCGTTGGCCTGGACG...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATAGATTTCCAGATGCATaGGCACGGACAGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHRFPDA*ARTGSR
Trigger: GCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCT...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAAACTCACCACTGGCCTaGGCGCAAGAGCATATTTTG +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLNSPLA*AQEHIL
Trigger: CAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTT...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCAACTCACCACTGGCCTaGGCGCAAGAGCATATTTTG +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGNSPLA*AQEHIL
Trigger: CAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTT...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGAGATAGGAGGGACATaGAAAAGGCATGGCGTACAT +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAEIGGT*KRHGVH
Trigger: ATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAGGGCTGTCCTGTGCCTaGCTAAAGGTAGACAGACTA +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSGLSCA*LKVDRL
Trigger: TAGTCTGTCTACCTTTAGCCAGGCACAGGACAGCCC...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGGTCCATTTTGTAATTTaGGGATGGTGTGGACTTGTA +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQVHFVI*GWCGLV
Trigger: TACAAGTCCACACCATCCCCAAATTACAAAATGGAC...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGGCAAAATCAGGTTTATaGAAAACGCAGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGAKSGL*KTQHLL
Trigger: AAGCAGATGCTGCGTTTTCCATAAACCTGATTTTGC...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGCAAAATCAGGTTTATaGAAAACGCAGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLAKSGL*KTQHLL
Trigger: AAGCAGATGCTGCGTTTTCCATAAACCTGATTTTGC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGCAGTGCGGGGAGGCTaGCTCCTCTCTTTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPAVRGG*LLSLFP
Trigger: TGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTAAGAGCAAACAGATCTaGAGAACGGAAGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCKSKQI*RTEAHP
Trigger: AGGGTGGGCTTCCGTTCTCCAGATCTGTTTGCTCTT...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCTGGGCTTGCTTGTTTaGGACCTGATCCTTAACTTC +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGLGLLV*DLILNF
Trigger: GAAGTTAAGGATCAGGTCTCAAACAAGCAAGCCCAG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCAGACGCAAACTTGACTaGCTCAATGGTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGRRKLD*LNGAVL
Trigger: GAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCT...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGCGGCAGACGCAAACTTaGCTGACTCAATGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQRQTQT*LTQWCC
Trigger: ACAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCG...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGAGAAAGATAGGCCATaGACTTCTGGTACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFEKDRP*TSGTGL
Trigger: AAGACCTGTACCAGAAGTTCATGGCCTATCTTTCTC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTACCAAAGGTGAAGGATaGAGACAGGCCCAACACCTT +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFTKGEG*RQAQHL
Trigger: AAGGTGTTGGGCCTGTCTTCATCCTTCACCTTTGGT...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAACTTCACTCGTAAGTTaGTATCCTGATACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSITSLVS*YPDTRE
Trigger: TTCCCGAGTATCAGGATATCAACTTACGAGTGAAGT...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCATCACGACTCTGGCGATaGGATAATCGGCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSSRLWR*DNRLLR
Trigger: CCTTAAGAGCCGATTATCTCATCGCCAGAGTCGTGA...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTGTCCTGAAACTCTTTaGTCAGTTTCTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFCPETL*SVSPAQ
Trigger: CTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTTGTCCTGAAACTCTTTaGTCAGTTTCTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFICPETL*SVSPAQ
Trigger: CTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACA...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GATGGTAGGGTTACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACCCCAGATGGACTTGCTaGCCACTGTGGACCCAGTAT +
Preference number: 4 (lower is better)
Translates to: DGRVTVSHIKSTAWTKTNPRWTC*PLWTQY
Trigger: ATACTGGGTCCACAGTGGTCAGCAAGTCCATCTGGG...GTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATGCCGTTTGGGGAGGATaGGGTTTCTCAGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHAVWGG*GFSACR
Trigger: TCGACATGCTGAGAAACCTCATCCTCCCCAAACGGC...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGAAAAACACAGAACAATaGCTAAGTGTCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGKNTEQ*LSVQAC
Trigger: ACATGCTTGGACACTTAGTCATTGTTCTGTGTTTTT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCACCCTTGTATGTGGTATaGGTGTGCCTTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSPLYVV*VCLHLQ
Trigger: CTGGAGATGAAGGCACACTCATACCACATACAAGGG...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTTTTCTGGAATTAGCCTaGCTGGGTAAGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIFLELA*LGKTWI
Trigger: TATCCAGGTCTTACCCAGTCAGGCTAATTCCAGAAA...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTCTCTCTCAGGACAACTaGGTCTCCTGCGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPLSQDN*VSCVRE
Trigger: CTCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAG...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAAGTCTTTGGTTCATGTaGGGCAAAATCAGGTTTATG +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTSLWFM*GKIRFM
Trigger: CATAAACCTGATTTTGCCTCACATGAACCAAAGACT...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTGACTTTAAAGCTCCTTaGGATCCCAGGTTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIDFKAP*DPRLRG
Trigger: ACCCCGCAACCTGGGATCTCAAGGAGCTTTAAAGTC...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGTCAGCCTGCTGCAGTaGAACTCAACCACGATTTTC +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSVSLLQ*NSTTIF
Trigger: GAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGAC...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGATTCAGAGACATCCTTTaGGAAGTTAAAATTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARFRDIL*EVKIAE
Trigger: CTCTGCAATTTTAACTTCTCAAAGGATGTCTCTGAA...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCGGCATTGGTTTAAAGTaGTTCTTTTCAGAGACATCC +
Preference number: 4 (lower is better)
Translates to: LSHQATSACCSETQPRFSGIGLK*FFSETS
Trigger: GGATGTCTCTGAAAAGAATCACTTTAAACCAATGCC...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATGCAGCAGCTCTGCAGTaGGTGGGGAACAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHAAALQ*VGNRNL
Trigger: GAGATTTCTGTTCCCCACTCACTGCAGAGCTGCTGC...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR TCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGAACCGCGCTGTCACTaGTACGTCGTCCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKEPRCH*YVVQGV
Trigger: AACACCCTGGACGACGTATCAGTGACAGCGCGGTTC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR GCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCCTGGGCCACAAGGGTaGTCTTATGGTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGPGPQG*SYGSKI
Trigger: TATTTTGGAACCATAAGAGCACCCTTGTGGCCCAGG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR GCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTAAGGATCCCCAGGTCTaGAAGCTAATGGCAAACAAC +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVKDPQV*KLMANN
Trigger: GTTGTTTGCCATTAGCTTGCAGACCTGGGGATCCTT...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTTTCAGAGTGGAGTCCTaGAAGTGCACCGACACAATC +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSFRVES*KCTDTI
Trigger: GATTGTGTCGGTGCACTTGCAGGACTCCACTCTGAA...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTTGCTCCATACCGTCCTaGTCAGGCTTAATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCCSIPS*SGLISR
Trigger: TCTTGAGATTAAGCCTGAGCAGGACGGTATGGAGCA...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTCCTTTGGGTCATCTCTaGCAACATGCTCCATACCGT +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSPLGHL*QHAPYR
Trigger: ACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGG...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCCACTCTCCAAACTGCTaGTATAATCGTAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAHSPNC*YNRREG
Trigger: ACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTG...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCGGAGGTAGTTCTAAGTaGACCTGGCAAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGGGSSK*TWQRTA
Trigger: AGCTGTTCTTTGCCAGGTGCACTTAGAACTACCTCC...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GCTGTTGGGCCCTTTGTCCTGAAACTCTTTGATCAGTTTCTCCAGCACAGTCACAAATCTTCTGGAGTTTaGACTATGTTGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AVGPFVLKLFDQFLQHSHKSSGV*TMLELG
Trigger: TCCCAGCTCCAACATAGTGCAAACTCCAGAAGATTT...GTGACTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTGTTTCCCAAGCCACTaGATAAGAGGATCCCTGATT +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFCFPSH*IRGSLI
Trigger: AATCAGGGATCCTCTTATGCAGTGGCTTGGGAAACA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGTCTGGGAATAGCGAATaGATATCAAAAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGSGNSE*ISKGFI
Trigger: AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGA...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTCAGAGCACAGCAGTATaGCCGGAACATCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIQSTAV*PEHLHS
Trigger: GCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTG...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGGAAAACGCAGCATCTaGTTCAAGGCTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDGKRSI*FKAASS
Trigger: AGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATTCCCAGGTTGCGGGGTaGATAAATGGCCCAAATCGG +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHSQVAG*INGPNR
Trigger: CCGATTTGGGCCATTTATGCACCCCGCAACCTGGGA...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGAGATCATCAGGAAAATaGCAAGTTCCCATTAAGACT +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQRSSGK*QVPIKT
Trigger: AGTCTTAATGGGAACTTGGCATTTTCCTGATGATCT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATATGCTGTATATGCTGTaGCTTGGGGGACCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHMLYML*LGGPPE
Trigger: CTCTGGGGGTCCCCCAAGGCACAGCATATACAGCAT...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCATTCGGCTCTAGGATCTaGGCTTGCTTGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSFGSRI*ACLFET
Trigger: GGTCTCAAACAAGCAAGCCCAGATCCTAGAGCCGAA...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATTTCACCAAGAGCCTTTaGGTCATCTCTGCCAACATG +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDFTKSL*VISANM
Trigger: CATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAA...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTATCGTAGGGAAGGTCTaGAATGTTCTCGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIIVGKV*NVLGRR
Trigger: GCGTCTGCCGAGAACATTCCAGACCTTCCCTACGAT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGAGAAAACCAAGTTCTaGACTGTCTTGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFEKTKF*TVLCSA
Trigger: TGCACTGCACAAGACAGTCCAGAACTTGGTTTTCTC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGACAAGTTAAAATCTTCTaGAGTTTGCACTATGTTGGA +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGQVKIF*SLHYVG
Trigger: TCCAACATAGTGCAAACTCCAGAAGATTTTAACTTG...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGACACAGGTATACAAGATaGGGTTATTTCTACTTCAGA +
Preference number: 4 (lower is better)
Translates to: CFKAASSLSGQLSLLREGHRYTR*GYFYFR
Trigger: TCTGAAGTAGAAATAACCCCATCTTGTATACCTGTG...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAAGAAGGCCTCCATGTTaGTCACCACAGGTATACAAG +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLRRPPC*SPQVYK
Trigger: CTTGTATACCTGTGGTGACCAACATGGAGGCCTTCT...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCAGAAGGCCTCCATGTTaGTCACCACAGGTATACAAG +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGRRPPC*SPQVYK
Trigger: CTTGTATACCTGTGGTGACCAACATGGAGGCCTTCT...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGATCCTCTGTCCCAGCTaGGATCTCAGTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQILCPS*DLSGME
Trigger: CTCCATTCCACTGAGATCCCAGCTGGGACAGAGGAT...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGCCTGATACTCGGGAATaGACCTCACTGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQPDTRE*TSLLPR
Trigger: TCGTGGAAGCAGTGAGGTCCATTCCCGAGTATCAGG...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGTGTAATAAATATCGTTaGGCCACTTCACTCGTAAGT +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQCNKYR*ATSLVS
Trigger: ACTTACGAGTGAAGTGGCCCAACGATATTTATTACA...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGACATGGAAAAGGCATaGCGTACATCTGGGAATAGC +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDDMEKA*RTSGNS
Trigger: GCTATTCCCAGATGTACGCCATGCCTTTTCCATGTC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAGAGATAGGAGGGACATaGAAAAGGCATGGCGTACAT +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLEIGGT*KRHGVH
Trigger: ATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTC...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCGAGATAGGAGGGACATaGAAAAGGCATGGCGTACAT +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGEIGGT*KRHGVH
Trigger: ATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTC...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTCCACTAATTTCAGCTaGGACTGGAAGAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPSTNFS*DWKREN
Trigger: GTTTTCTCTCTTCCAGTCCCAGCTGAAATTAGTGGA...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAAATTTGGGGATGGTGTaGACTTGTATTTTACTTAAG +
Preference number: 4 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGNLGMV*TCILLK
Trigger: CTTAAGTAAAATACAAGTCCACACCATCCCCAAATT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAGTCCATTTTGTAATTTaGGGATGGTGTGGACTTGTA +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTVHFVI*GWCGLV
Trigger: TACAAGTCCACACCATCCCCAAATTACAAAATGGAC...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAGCAAAATCAGGTTTATaGAAAACGCAGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTAKSGL*KTQHLL
Trigger: AAGCAGATGCTGCGTTTTCCATAAACCTGATTTTGC...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCATTTGCACTTCGAGATaGAAACAAAGGCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: MWYECAFISSCQSQIAHLICTSR*KQRHGK
Trigger: TTTTCCATGCCTTTGTTTCCATCTCGAAGTGCAAAT...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
3UTR CAA 72 bp CCTGGACAAAAACAAACAATTGAGCAGCTCAGCCTGTaGATGGCATCACACATTCCTCTCTGCCACATGGAA +
Preference number: 4 (lower is better)
Translates to: PGQKQTIEQLSL*MASHIPLCHME
Trigger: TTCCATGTGGCAGAGAGGAATGTGTGATGCCATCAACAGGCTGAGCTGCTCAATTGTTTGTTTTTGTCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTGAGCAAGTAACCTCATaGGAAACCACATCATCCCTA +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVEQVTS*ETTSSL
Trigger: TAGGGATGATGTGGTTTCTCATGAGGTTACTTGCTC...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR TCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTGCTTGTTTGAGACCTaGTCCTTAACTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFCLFET*SLTSFR
Trigger: TCTGAAGGAAGTTAAGGATCAGGTCTCAAACAAGCA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCTGGGCTTGCTTGTTTaGGACCTGATCCTTAACTTC +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFLGLLV*DLILNF
Trigger: GAAGTTAAGGATCAGGTCTCAAACAAGCAAGCCCAG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTGAGAAAGATAGGCCATaGACTTCTGGTACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVEKDRP*TSGTGL
Trigger: AAGACCTGTACCAGAAGTTCATGGCCTATCTTTCTC...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTACCAAAGGTGAAGGATaGAGACAGGCCCAACACCTT +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFITKGEG*RQAQHL
Trigger: AAGGTGTTGGGCCTGTCTTCATCCTTCACCTTTGGT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGGATAGATCTCTAAGTTaGAATGTTCTGATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILDRSLS*NVLMRR
Trigger: CCTTCTCATCAGAACATTTCAACTTAGAGATCTATC...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTTCACGACTCTGGCGATaGGATAATCGGCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFISRLWR*DNRLLR
Trigger: CCTTAAGAGCCGATTATCTCATCGCCAGAGTCGTGA...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTTGTCCTGAAACTCTTTaGTCAGTTTCTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVCPETL*SVSPAQ
Trigger: CTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACA...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTTTGGGCCCTTTGTCCTaGAACTCTTTGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVLGPLS*NSLISF
Trigger: GAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAA...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTGTCTTCTATATTCCGTaGGCTGCACAGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIVFYIP*AAQSCR
Trigger: CCTGCAAGACTGTGCAGCTCACGGAATATAGAAGAC...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTATCCTCCCTCTGAACTaGTGGTGTTTAGTATCGATA +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFILPLN*WCLVSI
Trigger: TATCGATACTAAACACCATCAGTTCAGAGGGAGGAT...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTATTTCTGGAATTAGCCTaGCTGGGTAAGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLFLELA*LGKTWI
Trigger: TATCCAGGTCTTACCCAGTCAGGCTAATTCCAGAAA...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTAGTCTTTGGTTCATGTaGGGCAAAATCAGGTTTATG +
Preference number: 4 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPSLWFM*GKIRFM
Trigger: CATAAACCTGATTTTGCCTCACATGAACCAAAGACT...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGGCATTGGTTTAAAGTaGTTCTTTTCAGAGACATCC +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIGIGLK*FFSETS
Trigger: GGATGTCTCTGAAAAGAATCACTTTAAACCAATGCC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GCTGTTGGGCCCTTTGTCCTGAAACTCTTTGATCAGTTTCTCCAGCACAGTCACGTGTCTCTAACCACTTaGAGAGTGACATGTATTTCT +
Preference number: 4 (lower is better)
Translates to: AVGPFVLKLFDQFLQHSHVSLTT*RVTCIS
Trigger: AGAAATACATGTCACTCTTCAAGTGGTTAGAGACAC...GTGACTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTTTCAGAGTGGAGTCCTaGAAGTGCACCGACACAATC +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIFRVES*KCTDTI
Trigger: GATTGTGTCGGTGCACTTGCAGGACTCCACTCTGAA...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTTCATCTCTGCCAACATaGTCCATACCGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFISSLPT*SIPSCS
Trigger: TGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGA...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCACTCTCCAAACTGCTaGTATAATCGTAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGHSPNC*YNRREG
Trigger: ACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGAGGAGGATGTTGGGTaGCTTTCCCGTGAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPEEDVG*LSREVD
Trigger: GTCAACCTCACGGGAAAGGCACCCAACATCCTCCTC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AATCCACAGCCTGGACAAAAACAAACAATTGAGCAGCTCAGCCTGTTGATGGCAGTTCCAAAAGGCACATaGACAATCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NPQPGQKQTIEQLSLLMAVPKGT*TIILSL
Trigger: CAAGGACAGGATGATTGTGCATGTGCCTTTTGGAAC...TGCCATCAACAGGCTGAGCTGCTCAATTGTTTGTTTTTGTCCAGGCTGTGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTTGTTTCCCAAGCCACTaGATAAGAGGATCCCTGATT +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVCFPSH*IRGSLI
Trigger: AATCAGGGATCCTCTTATGCAGTGGCTTGGGAAACA...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCATTACTTTCCCCAACTaGTTGGTCTGCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAITFPN*LVCRFW
Trigger: CCAAAATCTGCAGACCAAGCAGTTGGGGAAAGTAAT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGCCACGGACATCAGATaGTGGACAAACGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKATDIR*WTNGIL
Trigger: GAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGCCACGGACATCAGATaGTGGACAAACGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPATDIR*WTNGIL
Trigger: GAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGCTAGGGGTAAAGGTCTaGACTACTAAGAAAATATCT +
Preference number: 4 (lower is better)
Translates to: FLKSPLETRYQPGREDILLGVKV*TTKKIS
Trigger: AGATATTTTCTTAGTAGTGCAGACCTTTACCCCTAG...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATATGATATTCTGCAGATaGCCTCTCAAGGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDMIFCR*PLKGKS
Trigger: GGACTTACCCTTGAGAGGGCATCTGCAGAATATCAT...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTTCCCTGATGATATTCTaGAGATGCCCTCTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFSLMIF*RCPLKG
Trigger: ACCCTTGAGAGGGCATCTGCAGAATATCATCAGGGA...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTGATTCTCCCATGTTCTaGCTGTTAAGAGCAAACAGA +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIDSPMF*LLRANR
Trigger: TCTGTTTGCTCTTAACAGGCAGAACATGGGAGAATC...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTTTCGGCTCTAGGATCTaGGCTTGCTTGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIFGSRI*ACLFET
Trigger: GGTCTCAAACAAGCAAGCCCAGATCCTAGAGCCGAA...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTTGCCTCTCCTTTGTTTaGGTTCTTCACCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFCLSFV*VLHQEP
Trigger: AGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCA...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTGAGAAAACCAAGTTCTaGACTGTCTTGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVEKTKF*TVLCSA
Trigger: TGCACTGCACAAGACAGTCCAGAACTTGGTTTTCTC...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTAGTTCTAAGTGCACCTaGCAAAGAACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSSSKCT*QRTASP
Trigger: GGGAGAAGCTGTTCTTTGCCAGGTGCACTTAGAACT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AATCCACAGCCTGGACAAAAACAAACAATTGAGCAGCTCAGCCTGTTGATGGCAGAGTTTGCACTATGTTaGAGCTGGGAGGTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: NPQPGQKQTIEQLSLLMAEFALC*SWEVVL
Trigger: TAGAACTACCTCCCAGCTCCAACATAGTGCAAACTC...TGCCATCAACAGGCTGAGCTGCTCAATTGTTTGTTTTTGTCCAGGCTGTGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGACAAGTTAAAATCTTCTaGAGTTTGCACTATGTTGGA +
Preference number: 4 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARQVKIF*SLHYVG
Trigger: TCCAACATAGTGCAAACTCCAGAAGATTTTAACTTG...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGCAAGTTAAAATCTTCTaGAGTTTGCACTATGTTGGA +
Preference number: 4 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQQVKIF*SLHYVG
Trigger: TCCAACATAGTGCAAACTCCAGAAGATTTTAACTTG...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GGACTTGCTGACCACTGTGGACCCAGTATCGGTAATAAAGGGGAAGGACGCTGTCAAGTTAAAATCTTCTaGAGTTTGCACTATGTTGGA +
Preference number: 4 (lower is better)
Translates to: GLADHCGPSIGNKGEGRCQVKIF*SLHYVG
Trigger: TCCAACATAGTGCAAACTCCAGAAGATTTTAACTTG...ACAGCGTCCTTCCCCTTTATTACCGATACTGGGTCCACAGTGGTCAGCAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCAATCTAAGAGAGAGCTaGCCGGATTTTATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAANLRES*PDFISP
Trigger: GGGAGAAATAAAATCCGGCCAGCTCTCTCTTAGATT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCACACAGGTATACAAGATaGGGTTATTTCTACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPHRYTR*GYFYFR
Trigger: TCTGAAGTAGAAATAACCCCATCTTGTATACCTGTG...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTAGAAGGCCTCCATGTTaGTCACCACAGGTATACAAG +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSRRPPC*SPQVYK
Trigger: CTTGTATACCTGTGGTGACCAACATGGAGGCCTTCT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGGAGACGCATCGTTGTaGGGGTCACTTCGGCAAACA +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKGDASL*GSLRQT
Trigger: TGTTTGCCGAAGTGACCCCCACAACGATGCGTCTCC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATGTAATAAATATCGTTaGGCCACTTCACTCGTAAGT +
Preference number: 4 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTCNKYR*ATSLVS
Trigger: ACTTACGAGTGAAGTGGCCCAACGATATTTATTACA...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGGCCACACCACCGGGTaGACAGTAACTCTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKGHTTG*TVTLGS
Trigger: ACTTCCAAGAGTTACTGTCCACCCGGTGGTGTGGCC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTATCCTCCCTTGTATGTaGTATGAGTGTGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVILPCM*YECAFI
Trigger: GATGAAGGCACACTCATACCACATACAAGGGAGGAT...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAGAGATAGGAGGGACATaGAAAAGGCATGGCGTACAT +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSEIGGT*KRHGVH
Trigger: ATGTACGCCATGCCTTTTCCATGTCCCTCCTATCTC...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTAATTTCAGCTGGGACTaGAAGAGAGAAAACTGGACA +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFINFSWD*KRENWT
Trigger: TGTCCAGTTTTCTCTCTTCCAGTCCCAGCTGAAATT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGAATTTGGGGATGGTGTaGACTTGTATTTTACTTAAG +
Preference number: 4 (lower is better)
Translates to: INVSPSHRGESNFPPVGGNLGMV*TCILLK
Trigger: CTTAAGTAAAATACAAGTCCACACCATCCCCAAATT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTGCTCTAGTAACAAATTaGATGGAGCAAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIALVTN*MEQGWK
Trigger: TTTCCAGCCTTGCTCCATCCAATTTGTTACTAGAGC...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTCAGCTCTGCAGTGAGTaGGGAACAGAAATCTCAACA +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSQLCSE*GTEIST
Trigger: TGTTGAGATTTCTGTTCCCCACTCACTGCAGAGCTG...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
3UTR CAA 72 bp CTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTaGCCTTTTACAAAATACGGTCGATACTCAATGCAC +
Preference number: 4 (lower is better)
Translates to: LETRYQPGREDI*PFTKYGRYSMH
Trigger: GTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
CDS-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCATGGCAAACAACAGTCTaGCCACTTGACAATCTTGGA +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSWQTTV*PLDNLG
Trigger: TCCAAGATTGTCAAGTGGTCAGACTGTTGTTTGCCA...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR TCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTATGCTTGTTTGAGACCTaGTCCTTAACTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLCLFET*SLTSFR
Trigger: TCTGAAGGAAGTTAAGGATCAGGTCTCAAACAAGCA...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTTGCTTGTTTGAGACCTaGTCCTTAACTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCCLFET*SLTSFR
Trigger: TCTGAAGGAAGTTAAGGATCAGGTCTCAAACAAGCA...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGAAAGCCACCAAAGGTaGAGGATGAAGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPESHQR*RMKTGP
Trigger: TGGGCCTGTCTTCATCCTTCACCTTTGGTGGCTTTC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATGATTTCCTCCGCAGCTaGCAGCAAGTAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHDFLRS*QQVKRS
Trigger: ACTCCTCTTTACTTGCTGTCAGCTGCGGAGGAAATC...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCACTTCACTCGTAAGTTaGTATCCTGATACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGTSLVS*YPDTRE
Trigger: TTCCCGAGTATCAGGATATCAACTTACGAGTGAAGT...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAAAAAACACAGAACAATaGCTAAGTGTCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIKNTEQ*LSVQAC
Trigger: ACATGCTTGGACACTTAGTCATTGTTCTGTGTTTTT...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCATCTCCATAGCCTTTaGCAAGGCCACACTTCATTA +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFHLHSL*QGHTSL
Trigger: TAATGAAGTGTGGCCTTGTCAAAGGCTATGGAGATG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCACATCTCCATAGCCTTTaGCAAGGCCACACTTCATTA +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSHLHSL*QGHTSL
Trigger: TAATGAAGTGTGGCCTTGTCAAAGGCTATGGAGATG...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAGTCTTTGGTTCATGTaGGGCAAAATCAGGTTTATG +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFSLWFM*GKIRFM
Trigger: CATAAACCTGATTTTGCCTCACATGAACCAAAGACT...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAATAGAAGCGGAGTTTTaGGAGTCTTTGGTTCATGTG +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLIEAEF*ESLVHV
Trigger: CACATGAACCAAAGACTCTCAAAACTCCGCTTCTAT...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTTGCTCCATACCGTCCTaGTCAGGCTTAATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFICSIPS*SGLISR
Trigger: TCTTGAGATTAAGCCTGAGCAGGACGGTATGGAGCA...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GATGGTAGGGTTACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACTCATCTCTGCCAACATaGTCCATACCGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: DGRVTVSHIKSTAWTKTNSSLPT*SIPSCS
Trigger: TGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGA...GTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTCACTCCCAGAGGCACTaGCTCTCCTTTGTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPHSQRH*LSFVWV
Trigger: AACCCAAACAAAGGAGAGGCAGTGCCTCTGGGAGTG...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACAACACTCTCCAAACTaGTGCTATAATCGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLQHSPN*CYNRRE
Trigger: TTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTG...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCAACACTCTCCAAACTaGTGCTATAATCGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDQHSPN*CYNRRE
Trigger: TTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTTGTTTCCCAAGCCACTaGATAAGAGGATCCCTGATT +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFCFPSH*IRGSLI
Trigger: AATCAGGGATCCTCTTATGCAGTGGCTTGGGAAACA...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATCTGGGAATAGCGAATaGATATCAAAAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSISGNSE*ISKGFI
Trigger: AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGA...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAAGATCATCAGGAAAATaGCAAGTTCCCATTAAGACT +
Preference number: 4 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIRSSGK*QVPIKT
Trigger: AGTCTTAATGGGAACTTGGCATTTTCCTGATGATCT...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTACGGTCGATACTCAATaGACAGCCTCTAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSTVDTQ*TASKTR
Trigger: CCTTGTTTTAGAGGCTGTGCATTGAGTATCGACCGT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGCAACGTCAGCCTGCTaGAGTGAAACTCAACCACGA +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPATSAC*SETQPR
Trigger: TCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGATTCTCCCATGTTCTaGCTGTTAAGAGCAAACAGA +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDDSPMF*LLRANR
Trigger: TCTGTTTGCTCTTAACAGGCAGAACATGGGAGAATC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGTTCACCAAGAGCCTTTaGGTCATCTCTGCCAACATG +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQFTKSL*VISANM
Trigger: CATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAA...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAGAAAACCAAGTTCTaGACTGTCTTGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSEKTKF*TVLCSA
Trigger: TGCACTGCACAAGACAGTCCAGAACTTGGTTTTCTC...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTGAGAAAACCAAGTTCTaGACTGTCTTGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFEKTKF*TVLCSA
Trigger: TGCACTGCACAAGACAGTCCAGAACTTGGTTTTCTC...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTGAGTTTGCACTATGTTaGAGCTGGGAGGTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFEFALC*SWEVVL
Trigger: TAGAACTACCTCCCAGCTCCAACATAGTGCAAACTC...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTCTTTCCCCAACTGCTTaGTCTGCAGATTTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFILSPTA*SADFGD
Trigger: ATCGCCAAAATCTGCAGACCAAGCAGTTGGGGAAAG...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAACCTGATACTCGGGAATaGACCTCACTGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKPDTRE*TSLLPR
Trigger: TCGTGGAAGCAGTGAGGTCCATTCCCGAGTATCAGG...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTGTGGACAGTAACTCTTaGAAGTCTGTCTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVVDSNS*KSVFPF
Trigger: AAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCAC...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAATCCTCCCTTGTATGTaGTATGAGTGTGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSILPCM*YECAFI
Trigger: GATGAAGGCACACTCATACCACATACAAGGGAGGAT...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTATCCTCCCTTGTATGTaGTATGAGTGTGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSILPCM*YECAFI
Trigger: GATGAAGGCACACTCATACCACATACAAGGGAGGAT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTGACATGGAAAAGGCATaGCGTACATCTGGGAATAGC +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIDMEKA*RTSGNS
Trigger: GCTATTCCCAGATGTACGCCATGCCTTTTCCATGTC...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTAATTTCAGCTGGGACTaGAAGAGAGAAAACTGGACA +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCNFSWD*KRENWT
Trigger: TGTCCAGTTTTCTCTCTTCCAGTCCCAGCTGAAATT...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTGCAAAATCAGGTTTATaGAAAACGCAGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIAKSGL*KTQHLL
Trigger: AAGCAGATGCTGCGTTTTCCATAAACCTGATTTTGC...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCATGCTTGTTTGAGACCTaGTCCTTAACTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSCLFET*SLTSFR
Trigger: TCTGAAGGAAGTTAAGGATCAGGTCTCAAACAAGCA...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GATGGTAGGGTTACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACCTGGGCTTGCTTGTTTaGGACCTGATCCTTAACTTC +
Preference number: 4 (lower is better)
Translates to: DGRVTVSHIKSTAWTKTNLGLLV*DLILNF
Trigger: GAAGTTAAGGATCAGGTCTCAAACAAGCAAGCCCAG...GTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGATTTCCTCCGCAGCTaGCAGCAAGTAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPDFLRS*QQVKRS
Trigger: ACTCCTCTTTACTTGCTGTCAGCTGCGGAGGAAATC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTCTCCGCCGATCTTCATaGGGTCACTGTAATAAATAT +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSLRRSS*GHCNKY
Trigger: ATATTTATTACAGTGACCTCATGAAGATCGGCGGAG...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAATTCTCCCATGAGTGTTaGGTTAACCAGAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKFSHEC*VNQNSA
Trigger: GGCGGAGTTCTGGTTAACTCAACACTCATGGGAGAA...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTTTCTCCCATGAGTGTTaGGTTAACCAGAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPFSHEC*VNQNSA
Trigger: GGCGGAGTTCTGGTTAACTCAACACTCATGGGAGAA...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTTGTCCTGAAACTCTTTaGTCAGTTTCTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFICPETL*SVSPAQ
Trigger: CTGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACA...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAGTCAAAGTAATGAACTaGTTTCCTCTACAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLVKVMN*FPLQGH
Trigger: GTGACCTTGTAGAGGAAATCAGTTCATTACTTTGAC...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGGAGAGCTCACTGAATaGTGTCAAAGTAATGAACTG +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSGELTE*CQSNEL
Trigger: CAGTTCATTACTTTGACATCATTCAGTGAGCTCTCC...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTCATCTCCATAGCCTTTaGCAAGGCCACACTTCATTA +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIHLHSL*QGHTSL
Trigger: TAATGAAGTGTGGCCTTGTCAAAGGCTATGGAGATG...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAAGTCTTTGGTTCATGTaGGGCAAAATCAGGTTTATG +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLSLWFM*GKIRFM
Trigger: CATAAACCTGATTTTGCCTCACATGAACCAAAGACT...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTATAGAAGCGGAGTTTTaGGAGTCTTTGGTTCATGTG +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSIEAEF*ESLVHV
Trigger: CACATGAACCAAAGACTCTCAAAACTCCGCTTCTAT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCTTCAGAGACATCCTTTaGGAAGTTAAAATTGCAGAG +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAFRDIL*EVKIAE
Trigger: CTCTGCAATTTTAACTTCTCAAAGGATGTCTCTGAA...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTTCAGAGACATCCTTTaGGAAGTTAAAATTGCAGAG +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFFRDIL*EVKIAE
Trigger: CTCTGCAATTTTAACTTCTCAAAGGATGTCTCTGAA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTTGGCAAACAACAGTCTaGCCACTTGACAATCTAAGT +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSWQTTV*PLDNLS
Trigger: ACTTAGATTGTCAAGTGGTCAGACTGTTGTTTGCCA...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR GCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTGCTCTCCGTCACAAATaGTATGTGTTCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIALRHK*YVFCFK
Trigger: CTTGAAGCAGAACACATAGCATTTGTGACGGAGAGC...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTCACTTTGTACCCAAATaGTCTCCGTCACAAATGCTA +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSHFVPK*SPSQML
Trigger: TAGCATTTGTGACGGAGAGCATTTGGGTACAAAGTG...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCACTTTGTACCCAAATaGTCTCCGTCACAAATGCTA +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFHFVPK*SPSQML
Trigger: TAGCATTTGTGACGGAGAGCATTTGGGTACAAAGTG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTTTCAGAGTGGAGTCCTaGAAGTGCACCGACACAATC +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPFRVES*KCTDTI
Trigger: GATTGTGTCGGTGCACTTGCAGGACTCCACTCTGAA...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGTTCCAAAAGGCACATaGACAATCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQVPKGT*TIILSL
Trigger: CAAGGACAGGATGATTGTGCATGTGCCTTTTGGAAC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTAAATCTTCTGGAGTTTaGACTATGTTGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFKSSGV*TMLELG
Trigger: TCCCAGCTCCAACATAGTGCAAACTCCAGAAGATTT...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATTCTTTTAAAGCTATGTaGGCACACACGCACGCACAC +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHSFKAM*AHTHAH
Trigger: GTGTGCGTGCGTGTGTGCGCACATAGCTTTAAAAGA...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTATGATATTCTGCAGATaGCCTCTCAAGGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFIMIFCR*PLKGKS
Trigger: GGACTTACCCTTGAGAGGGCATCTGCAGAATATCAT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GATGGTAGGGTTACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACCATCTGCTTCAAGGCTaGTTCATCTCTCTCAGGACA +
Preference number: 4 (lower is better)
Translates to: DGRVTVSHIKSTAWTKTNHLLQG*FISLRT
Trigger: TGTCCTGAGAGAGATGAAGCAGCCTTGAAGCAGATG...GTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTTCACACATTCCTCTCTaGCACATGGAAAAAGTTACA +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCSHIPL*HMEKVT
Trigger: TGTAACTTTTTCCATGTGGCAGAGAGGAATGTGTGA...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTTTCGGCTCTAGGATCTaGGCTTGCTTGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPFGSRI*ACLFET
Trigger: GGTCTCAAACAAGCAAGCCCAGATCCTAGAGCCGAA...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATTGCCTCTCCTTTGTTTaGGTTCTTCACCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHCLSFV*VLHQEP
Trigger: AGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCA...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTAGTTCCAGACACTCGTaGCAACTAGACAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPSSRHS*QLDRWR
Trigger: CCTCCATCTGTCTAGTTGCCACGAGTGTCTGGAACT...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATCTTTCCCCAACTGCTTaGTCTGCAGATTTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHLSPTA*SADFGD
Trigger: ATCGCCAAAATCTGCAGACCAAGCAGTTGGGGAAAG...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCTGTAATAAATATCGTTaGGCCACTTCACTCGTAAGT +
Preference number: 4 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAACNKYR*ATSLVS
Trigger: ACTTACGAGTGAAGTGGCCCAACGATATTTATTACA...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAGTGGACAGTAACTCTTaGAAGTCTGTCTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSVDSNS*KSVFPF
Trigger: AAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCAC...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTTCCACTAATTTCAGCTaGGACTGGAAGAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFSTNFS*DWKREN
Trigger: GTTTTCTCTCTTCCAGTCCCAGCTGAAATTAGTGGA...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAAAGAGCAAACAGATCTaGAGAACGGAAGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKKSKQI*RTEAHP
Trigger: AGGGTGGGCTTCCGTTCTCCAGATCTGTTTGCTCTT...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
3UTR CAA 72 bp ATGCCATGTCTTCTATATTCCGTGAGCTGCACAGTCTaGCAGGAATGCTCCACATTTCAGAGTAAATCTGAA +
Preference number: 4 (lower is better)
Translates to: MPCLLYSVSCTV*QECSTFQSKSE
Trigger: TTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATATAGAAGACATGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
3UTR CAA 72 bp GAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATaGAACCGCCGTCCTTCAATTTTCTTCACACTATCA +
Preference number: 4 (lower is better)
Translates to: EKSCHGSELHNA*NRRPSIFFTLS
Trigger: TGATAGTGTGAAGAAAATTGAAGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674895.2
CDS-3UTR TCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGATAGATCTCTAAGTTaGAATGTTCTGATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDDRSLS*NVLMRR
Trigger: CCTTCTCATCAGAACATTTCAACTTAGAGATCTATC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTGATAGATCTCTAAGTTaGAATGTTCTGATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVDRSLS*NVLMRR
Trigger: CCTTCTCATCAGAACATTTCAACTTAGAGATCTATC...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGTCAAAGTAATGAACTaGTTTCCTCTACAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSVKVMN*FPLQGH
Trigger: GTGACCTTGTAGAGGAAATCAGTTCATTACTTTGAC...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGGCATTGGTTTAAAGTaGTTCTTTTCAGAGACATCC +
Preference number: 4 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSGIGLK*FFSETS
Trigger: GGATGTCTCTGAAAAGAATCACTTTAAACCAATGCC...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGAAATCTTCTGGAGTTTaGACTATGTTGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: NETYIVSLEIFVPDDILQKSSGV*TMLELG
Trigger: TCCCAGCTCCAACATAGTGCAAACTCCAGAAGATTT...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCTAGGGGTAAAGGTCTaGACTACTAAGAAAATATCT +
Preference number: 4 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCLGVKV*TTKKIS
Trigger: AGATATTTTCTTAGTAGTGCAGACCTTTACCCCTAG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTCTGGGAATAGCGAATaGATATCAAAAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: SCTVLQECSTFQSKSETGSGNSE*ISKGFI
Trigger: AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGA...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATACGGTCGATACTCAATaGACAGCCTCTAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHTVDTQ*TASKTR
Trigger: CCTTGTTTTAGAGGCTGTGCATTGAGTATCGACCGT...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTTGCCTCTCCTTTGTTTaGGTTCTTCACCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPCLSFV*VLHQEP
Trigger: AGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCA...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GATGGTAGGGTTACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACGAGAAAACCAAGTTCTaGACTGTCTTGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: DGRVTVSHIKSTAWTKTNEKTKF*TVLCSA
Trigger: TGCACTGCACAAGACAGTCCAGAACTTGGTTTTCTC...GTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAAGTTCTAAGTGCACCTaGCAAAGAACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKSSKCT*QRTASP
Trigger: GGGAGAAGCTGTTCTTTGCCAGGTGCACTTAGAACT...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp AATCCACAGCCTGGACAAAAACAAACAATTGAGCAGCTCAGCCTGTTGATGGCACACAGGTATACAAGATaGGGTTATTTCTACTTCAGA +
Preference number: 4 (lower is better)
Translates to: NPQPGQKQTIEQLSLLMAHRYTR*GYFYFR
Trigger: TCTGAAGTAGAAATAACCCCATCTTGTATACCTGTG...TGCCATCAACAGGCTGAGCTGCTCAATTGTTTGTTTTTGTCCAGGCTGTGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACACAGGTATACAAGATaGGGTTATTTCTACTTCAGA +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLHRYTR*GYFYFR
Trigger: TCTGAAGTAGAAATAACCCCATCTTGTATACCTGTG...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATTGTAATAAATATCGTTaGGCCACTTCACTCGTAAGT +
Preference number: 4 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDCNKYR*ATSLVS
Trigger: ACTTACGAGTGAAGTGGCCCAACGATATTTATTACA...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATATCCTCCCTTGTATGTaGTATGAGTGTGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHILPCM*YECAFI
Trigger: GATGAAGGCACACTCATACCACATACAAGGGAGGAT...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTTCCACTAATTTCAGCTaGGACTGGAAGAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFISTNFS*DWKREN
Trigger: GTTTTCTCTCTTCCAGTCCCAGCTGAAATTAGTGGA...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAATTTGGGGATGGTGTaGACTTGTATTTTACTTAAG +
Preference number: 4 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFNLGMV*TCILLK
Trigger: CTTAAGTAAAATACAAGTCCACACCATCCCCAAATT...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAGTCCATTTTGTAATTTaGGGATGGTGTGGACTTGTA +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSVHFVI*GWCGLV
Trigger: TACAAGTCCACACCATCCCCAAATTACAAAATGGAC...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGAGAAAGATAGGCCATaGACTTCTGGTACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKEKDRP*TSGTGL
Trigger: AAGACCTGTACCAGAAGTTCATGGCCTATCTTTCTC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGAGAAAGATAGGCCATaGACTTCTGGTACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPEKDRP*TSGTGL
Trigger: AAGACCTGTACCAGAAGTTCATGGCCTATCTTTCTC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATACTTCACTCGTAAGTTaGTATCCTGATACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHTSLVS*YPDTRE
Trigger: TTCCCGAGTATCAGGATATCAACTTACGAGTGAAGT...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GATGGTAGGGTTACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACCTCCGCCGATCTTCATaGGGTCACTGTAATAAATAT +
Preference number: 4 (lower is better)
Translates to: DGRVTVSHIKSTAWTKTNLRRSS*GHCNKY
Trigger: ATATTTATTACAGTGACCTCATGAAGATCGGCGGAG...GTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR TCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAATTGGGCCCTTTGTCCTaGAACTCTTTGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKLGPLS*NSLISF
Trigger: GAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAA...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATATCCTCCCTCTGAACTaGTGGTGTTTAGTATCGATA +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHILPLN*WCLVSI
Trigger: TATCGATACTAAACACCATCAGTTCAGAGGGAGGAT...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAGATTTTGTTCAAAGCTaGAAGCTCCATCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: NQVYGKRSICFKAASSLSDFVQS*KLHQTF
Trigger: GAAAGTTTGATGGAGCTTTCAGCTTTGAACAAAATC...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTTTTCTGGAATTAGCCTaGCTGGGTAAGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPFLELA*LGKTWI
Trigger: TATCCAGGTCTTACCCAGTCAGGCTAATTCCAGAAA...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTCACTCTCCAAACTGCTaGTATAATCGTAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPHSPNC*YNRREG
Trigger: ACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTG...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGTTCCAAAAGGCACATaGACAATCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKVPKGT*TIILSL
Trigger: CAAGGACAGGATGATTGTGCATGTGCCTTTTGGAAC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTCAGTACCTCCCCAGATaGTTACAAACAGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPQYLPR*LQTVIA
Trigger: TGCTATCACTGTTTGTAAGCATCTGGGGAGGTACTG...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTACGGTCGATACTCAATaGACAGCCTCTAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPTVDTQ*TASKTR
Trigger: CCTTGTTTTAGAGGCTGTGCATTGAGTATCGACCGT...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTACAAGGGTGCTCTTATaGTTCCAAAATATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFTRVLL*FQNIKS
Trigger: GGACTTTATATTTTGGAACCATAAGAGCACCCTTGT...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGAGTTTGCACTATGTTaGAGCTGGGAGGTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKEFALC*SWEVVL
Trigger: TAGAACTACCTCCCAGCTCCAACATAGTGCAAACTC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCACAGGTATACAAGATaGGGTTATTTCTACTTCAGA +
Preference number: 4 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFHRYTR*GYFYFR
Trigger: TCTGAAGTAGAAATAACCCCATCTTGTATACCTGTG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAAATTTGGGGATGGTGTaGACTTGTATTTTACTTAAG +
Preference number: 4 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLNLGMV*TCILLK
Trigger: CTTAAGTAAAATACAAGTCCACACCATCCCCAAATT...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAACTCCGCCGATCTTCATaGGGTCACTGTAATAAATAT +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKLRRSS*GHCNKY
Trigger: ATATTTATTACAGTGACCTCATGAAGATCGGCGGAG...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTACCTCCTCATCCAAGTaGTGCCTAATCAGACATTTA +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPTSSSK*CLIRHL
Trigger: TAAATGTCTGATTAGGCATCACTTGGATGAGGAGGT...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTATCCTCCCTCTGAACTaGTGGTGTTTAGTATCGATA +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPILPLN*WCLVSI
Trigger: TATCGATACTAAACACCATCAGTTCAGAGGGAGGAT...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAGTGGACAGTAACTCTTaGAAGTCTGTCTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKVDSNS*KSVFPF
Trigger: AAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCAC...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATGTCCATTTTGTAATTTaGGGATGGTGTGGACTTGTA +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHVHFVI*GWCGLV
Trigger: TACAAGTCCACACCATCCCCAAATTACAAAATGGAC...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
3UTR CAA 72 bp CCTTGTCCTCATTTCAGATTTCGTGTCTCTAACCACTaGAAGAGTGACATGTATTTCTGTCCATCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PCPHFRFRVSNH*KSDMYFCPSSF
Trigger: AAAGGAAGATGGACAGAAATACATGTCACTCTTCAAGTGGTTAGAGACACGAAATCTGAAATGAGGACAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR CAA 72 bp GCCTTGTGTTGTTTATTGTATTCTGTGATGAGGTCGTaGATGCAGATGGTAGGGTTACTGTTAGTCACATTA +
Preference number: 4 (lower is better)
Translates to: ALCCLLYSVMRS*MQMVGLLLVTL
Trigger: TAATGTGACTAACAGTAACCCTACCATCTGCATCAACGACCTCATCACAGAATACAATAAACAACACAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
3UTR CAA 72 bp AACAAGCTCTTACTTCCCCCTAACCCCTATGAACTCTaGATAACACCAAGAGTAGCACCTTCAGAATATATT +
Preference number: 4 (lower is better)
Translates to: NKLLLPPNPYEL*ITPRVAPSEYI
Trigger: AATATATTCTGAAGGTGCTACTCTTGGTGTTATCAAGAGTTCATAGGGGTTAGGGGGAAGTAAGAGCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674895.2
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGTCAAAGTAATGAACTaGTTTCCTCTACAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPVKVMN*FPLQGH
Trigger: GTGACCTTGTAGAGGAAATCAGTTCATTACTTTGAC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATGATTTTGTTCAAAGCTaGAAGCTCCATCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHDFVQS*KLHQTF
Trigger: GAAAGTTTGATGGAGCTTTCAGCTTTGAACAAAATC...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTAGTCTTTGGTTCATGTaGGGCAAAATCAGGTTTATG +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPSLWFM*GKIRFM
Trigger: CATAAACCTGATTTTGCCTCACATGAACCAAAGACT...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATCTAGGGGTAAAGGTCTaGACTACTAAGAAAATATCT +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHLGVKV*TTKKIS
Trigger: AGATATTTTCTTAGTAGTGCAGACCTTTACCCCTAG...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATTCTGGGAATAGCGAATaGATATCAAAAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHSGNSE*ISKGFI
Trigger: AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGA...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CCA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTAATTTGGGGATGGTGTaGACTTGTATTTTACTTAAG +
Preference number: 4 (lower is better)
Translates to: EKAWRTSGNSECISKGFINLGMV*TCILLK
Trigger: CTTAAGTAAAATACAAGTCCACACCATCCCCAAATT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR TCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGATTTTGTTCAAAGCTaGAAGCTCCATCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPDFVQS*KLHQTF
Trigger: GAAAGTTTGATGGAGCTTTCAGCTTTGAACAAAATC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTCTAGGGGTAAAGGTCTaGACTACTAAGAAAATATCT +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPLGVKV*TTKKIS
Trigger: AGATATTTTCTTAGTAGTGCAGACCTTTACCCCTAG...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR GCA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTAGATCATCAGGAAAATaGCAAGTTCCCATTAAGACT +
Preference number: 4 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPRSSGK*QVPIKT
Trigger: AGTCTTAATGGGAACTTGGCATTTTCCTGATGATCT...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
3UTR CAA 72 bp TGGATAAAGATGGTGCTAGTTTACAATGAAGGGATTTaGTTCAAAGCTGAAAGCTCCATCAAACTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: WIKMVLVYNEGI*FKAESSIKLSF
Trigger: GAAAGAAAGTTTGATGGAGCTTTCAGCTTTGAACAAAATCCCTTCATTGTAAACTAGCACCATCTTTATCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.2
ENST00000675057.1
ENST00000675307.1
CDS GCA 90 bp GCGCCCCTGCCACCTCTGGCCACACGGGCTGAGACGTCTGGCTCCTaGACAGCGCACTTCCCGCTGCCCTTCTCCACTGGCTGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: APLPPLATRAETSGS*TAHFPLPFSTGCSG
Trigger: GCCTGAGCAGCCAGTGGAGAAGGGCAGCGGGAAGTGCGCTGTGCAGGAGCCAGACGTCTCAGCCCGTGTGGCCAGAGGTGGCAGGGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612277.4
CDS CCA 90 bp AGTCTTCAATGGACTGCAGGCCTGATACCGGCCGCGGAGCGCTCCTaGCCCCGCTCCCGCCAGGCTCCGGGACCGCTGAAACGCACCCAG +
Preference number: 5 (lower is better)
Translates to: SLQWTAGLIPAAERS*PRSRQAPGPLKRTQ
Trigger: CTGGGTGCGTTTCAGCGGTCCCGGAGCCTGGCGGGAGCGGGGCCAGGAGCGCTCCGCGGCCGGTATCAGGCCTGCAGTCCATTGAAGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675307.1
CDS GCA 90 bp TGTTCAAGTCTTCAATGGATTCTGAGGCCGAAACGCGGCCGCTCCTaGGCCGGGTGGTCGCCCGCGAATCCCTGCCGCGCCGCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: CSSLQWILRPKRGRS*AGWSPANPCRAALR
Trigger: GCGCAGCGCGGCGCGGCAGGGATTCGCGGGCGACCACCCGGCGCAGGAGCGGCCGCGTTTCGGCCTCAGAATCCATTGAAGACTTGAACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000675057.1
CDS CCA 90 bp AAAGGCACATGCACAATCATCCTGTCCTTGTCCTCATTCTCCAGGTaGCCCTGGAGCCTGCCGGGGCTGAGCCGGACGGGGCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: KGTCTIILSLSSFSR*PWSLPGLSRTGPSW
Trigger: CCAGGAAGGCCCCGTCCGGCTCAGCCCCGGCAGGCTCCAGGGCCACCTGGAGAATGAGGACAAGGACAGGATGATTGTGCATGTGCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CCA 90 bp TCTGGTAAGTTCTTAGGAAACCCACTCACGGGCCTGAGTCCCCCGTaGAAGCGGCGACTTCGGCACCTGGACACCCGAGTCCCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SGKFLGNPLTGLSPP*KRRLRHLDTRVPRA
Trigger: GGCTCTGGGGACTCGGGTGTCCAGGTGCCGAAGTCGCCGCTTCCACGGGGGACTCAGGCCCGTGAGTGGGTTTCCTAAGAACTTACCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448340.5
CDS-3UTR CAA 90 bp GTTGCCGTCCGGGTGCACAGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGACCAACAGCAGACAGTaGTCCGTCCACGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: VAVRVHSHNLAALLVNLETNSRQ*SVHGSL
Trigger: CAGAGACCCGTGGACGGACAACTGTCTGCTGTTGGT...CTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACTGTGCACCCGGACGGCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CAA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGATTCCCTCCCCGTCCTTaGCCCTCGGTCTGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGFPPRP*PSVCRA
Trigger: GGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGAA...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GTTGCCGTCCGGGTGCACAGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGCCCAGCTTGCTGAAGTaGTCCACACTTGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: VAVRVHSHNLAALLVNLEPSLLK*STLASA
Trigger: TGCTGAAGCAAGTGTGGACAACTTCAGCAAGCTGGG...CTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACTGTGCACCCGGACGGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CAA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATTCCCTCCCCGTCCTTaGCCCTCGGTCTGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: CFKAASSLSGQLSLLREGFPPRP*PSVCRA
Trigger: GGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGAA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACAGCATGTCGAAGGAGTaGCCGTCCGGGTGCACAGTC +
Preference number: 5 (lower is better)
Translates to: ALLVNLEEARIVQANDGHSMSKE*PSGCTV
Trigger: GACTGTGCACCCGGACGGCAACTCCTTCGACATGCT...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS TCA 90 bp GCCGGACGGGGCCTTCCTGGTACCTGCAGCCACTGCTCAAGACGCTaGGCTTCACCTCGCTCTGGTCAGCCTTGGAGAAAACCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: AGRGLPGTCSHCSRR*ASPRSGQPWRKPSS
Trigger: AGAACTTGGTTTTCTCCAAGGCTGACCAGAGCGAGGTGAAGCTCAGCGTCTTGAGCAGTGGCTGCAGGTACCAGGAAGGCCCCGTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 90 bp GAGGGCTTCCTGGGAGTCGGAGCCCACATAGAGGAGGATGTTGGGTaGCTTTCCCGTGAGGTTGACTCTCCTCCCTTCTCTTTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: EGFLGVGAHIEEDVG*LSREVDSPPFSFGG
Trigger: TCCCCCGAAAGAGAAGGGAGGAGAGTCAACCTCACGGGAAAGGCACCCAACATCCTCCTCTATGTGGGCTCCGACTCCCAGGAAGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 90 bp CACAGGTGGCCCTGCCCAACAGGGGGCATTGGCAGGCAGCAGCTCTaGAGTGAGTGGGGAACAGAAATCTCAACAACCCACTGGTACCCA +
Preference number: 5 (lower is better)
Translates to: HRWPCPTGGIGRQQL*SEWGTEISTTHWYP
Trigger: TGGGTACCAGTGGGTTGTTGAGATTTCTGTTCCCCACTCACTGCAGAGCTGCTGCCTGCCAATGCCCCCTGTTGGGCAGGGCCACCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CAA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCGCAGTGCACCCTTGCTaGTCACCTGAAAGCCACCAA +
Preference number: 5 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTAVHPC*SPESHQ
Trigger: TTGGTGGCTTTCAGGTGACAAGCAAGGGTGCACTGC...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTCCCTCCCCGTCCTTaGCCCTCGGTCTGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTFPPRP*PSVCRA
Trigger: GGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGAA...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCTCCTCAAGAGTCCCCTaGAAACCCGTTACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTSSRVP*KPVTSL
Trigger: CAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGA...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCTCGGCAGACGCAAACTaGACTGACTCAATGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTSADAN*TDSMVL
Trigger: CAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCGA...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp AGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCAGTGCACCCTTGCTaGTCACCTGAAAGCCACCAA +
Preference number: 5 (lower is better)
Translates to: SHNLAALLVNLEEARIVQAVHPC*SPESHQ
Trigger: TTGGTGGCTTTCAGGTGACAAGCAAGGGTGCACTGC...CTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS GCA 90 bp TCGGGAATGGACCTCACTGCTTCCACGACAGCCACGGACATCAGATaGTGGACAAACGGGATCCTCTGTCCCAGCTGGGATCTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: SGMDLTASTTATDIR*WTNGILCPSWDLSG
Trigger: TCCACTGAGATCCCAGCTGGGACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGCTGTCGTGGAAGCAGTGAGGTCCATTCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 90 bp GTCCATGAGCCATGGACCATGCAAACGCCTTCAAGCAGCGCTGGGTaGTCCGATCAAAGCAGAACCGCGCTGTCACTGATACGTCGTCCA +
Preference number: 5 (lower is better)
Translates to: VHEPWTMQTPSSSAG*SDQSRTALSLIRRP
Trigger: TGGACGACGTATCAGTGACAGCGCGGTTCTGCTTTGATCGGAGCACCCAGCGCTGCTTGAAGGCGTTTGCATGGTCCATGGCTCATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CAA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCGACCACTTGACAATCTaGGAAGGTTACTGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTDHLTI*EGYWEH
Trigger: GTGCTCCCAGTAACCTTCCAAGATTGTCAAGTGGTC...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR CAA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACCTGCCTCTCCTTTGTTaGGGTTCTTCACCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: ALLVNLEEARIVQANDGHLPLLC*GSSPRA
Trigger: GGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAG...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CAA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTTCCCTCCCCGTCCTTaGCCCTCGGTCTGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFFPPRP*PSVCRA
Trigger: GGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGAA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCTTCCCTCCCCGTCCTTaGCCCTCGGTCTGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAFPPRP*PSVCRA
Trigger: GGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGAA...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCTTAGCCTCGAGATCTTaGTCCCTGATGATATTCTGC +
Preference number: 5 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGLASRS*SLMIFC
Trigger: GCAGAATATCATCAGGGACAAAGATCTCGAGGCTAA...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp AGTCACAACCTCGCCGCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGAGCAGCTCAGCCTGTaGATGGCATCACACATTCCT +
Preference number: 5 (lower is better)
Translates to: SHNLAALLVNLEEARIVQEQLSL*MASHIP
Trigger: AGGAATGTGTGATGCCATCAACAGGCTGAGCTGCTC...CTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS CCA 90 bp GGAATGGACCTCACTGCTTCCACGACAGCCACGGACATCAGATGCTaGACAAACGGGATCCTCTGTCCCAGCTGGGATCTCAGTGGAATG +
Preference number: 5 (lower is better)
Translates to: GMDLTASTTATDIRC*TNGILCPSWDLSGM
Trigger: CATTCCACTGAGATCCCAGCTGGGACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGCTGTCGTGGAAGCAGTGAGGTCCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAGCTGCCCAGATGGACTaGCTGACCACTGTGGACCCA +
Preference number: 5 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARAAQMD*LTTVDP
Trigger: TGGGTCCACAGTGGTCAGCAAGTCCATCTGGGCAGC...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGCTGCCCAGATGGACTaGCTGACCACTGTGGACCCA +
Preference number: 5 (lower is better)
Translates to: MWYECAFISSCQSQIAHLAAQMD*LTTVDP
Trigger: TGGGTCCACAGTGGTCAGCAAGTCCATCTGGGCAGC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGAGCATGTCGAAGGAGTaGCCGTCCGGGTGCACAGTC +
Preference number: 5 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQSMSKE*PSGCTV
Trigger: GACTGTGCACCCGGACGGCAACTCCTTCGACATGCT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GCAGTGCGGGGAGGCTGGCTCCTCTCTTTGTTCCCAGACTCCAGGGCAAGGGGCAGTCCATTTTGTAATTaGGGGATGGTGTGGACTTGT +
Preference number: 5 (lower is better)
Translates to: AVRGGWLLSLFPDSRARGSPFCN*GMVWTC
Trigger: ACAAGTCCACACCATCCCCAAATTACAAAATGGACT...GCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGCCAGCCTCCCCGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCACCCCAGTCGGCCACTaGCTCTCACATCAGGCAACG +
Preference number: 5 (lower is better)
Translates to: MWYECAFISSCQSQIAHLTPVGH*LSHQAT
Trigger: CGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGGT...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGTGTATATGCTGTGCCTaGGGGGACCCCCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQCICCA*GDPQRL
Trigger: CAGCCTCTGGGGGTCCCCCAAGGCACAGCATATACA...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS TCA 90 bp CAAGCAGCGCTGGGTGCTCCGATCAAAGCAGAACCGCGCTGTCACTaGTACGTCGTCCAGGGTGTTTGCCTTCCAGTGGATAAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: QAALGAPIKAEPRCH*YVVQGVCLPVDKGK
Trigger: TTTGCCTTTATCCACTGGAAGGCAAACACCCTGGACGACGTATCAGTGACAGCGCGGTTCTGCTTTGATCGGAGCACCCAGCGCTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS GCA 90 bp ACCTGGCAAAGAACAGCTTCTCCCCCGCGAGTTCCAAAAGGCACATaGACAATCATCCTGTCCTTGTCCTCATTCTCCAGGTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: TWQRTASPPRVPKGT*TIILSLSSFSRWPW
Trigger: CCAGGGCCACCTGGAGAATGAGGACAAGGACAGGATGATTGTGCATGTGCCTTTTGGAACTCGCGGGGGAGAAGCTGTTCTTTGCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CCA 90 bp TGTCCCCAGCAGGCTCACTCCCAGAGGCACTGCCTCTCCTTTGTTTaGGTTCTTCACCAAGAGCCTTTGGGTCATCTCTGCCAACATGCT +
Preference number: 5 (lower is better)
Translates to: CPQQAHSQRHCLSFV*VLHQEPLGHLCQHA
Trigger: AGCATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCCTCTGGGAGTGAGCCTGCTGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGAAACGCCACCCCCAGCTaGCTGAAGTTGTCCACACTT +
Preference number: 5 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGNATPS*LKLSTL
Trigger: AAGTGTGGACAACTTCAGCAAGCTGGGGGTGGCGTT...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACCAACAGCAGACAGTaGTCCGTCCACGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQTNSRQ*SVHGSL
Trigger: CAGAGACCCGTGGACGGACAACTGTCTGCTGTTGGT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACACCAGGAGACGCATCGTaGTGGGGGTCACTTCGGCAA +
Preference number: 5 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTPGDAS*WGSLRQ
Trigger: TTGCCGAAGTGACCCCCACAACGATGCGTCTCCTGG...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCCAACGATGGACACCTTaGGTCCCTCTGCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: LSHQATSACCSETQPRFSQRWTP*VPLRCP
Trigger: TGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTTG...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCCGGCATTACCGCCGTTaGGGGAGGATGAGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: MWYECAFISSCQSQIAHLRHYRR*GRMRFL
Trigger: GAGAAACCTCATCCTCCCCAAACGGCGGTAATGCCG...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CCAGACTCCAGGGCAAGGGGCGACCATGCTGTATATGCTGTGCCTTGGGGGACCGCTCTGAGAGAGGGCTaGCCTTATATTACAAAGTCT +
Preference number: 5 (lower is better)
Translates to: PDSRARGDHAVYAVPWGTALREG*PYITKS
Trigger: AGACTTTGTAATATAAGGCAAGCCCTCTCTCAGAGC...GGTCCCCCAAGGCACAGCATATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCCCAACAGGGGGCATaGGCAGGCAGCAGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAAQQGA*AGSSSA
Trigger: TGCAGAGCTGCTGCCTGCCAATGCCCCCTGTTGGGC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS GCA 90 bp GTGCATTTCCGTTTTCTAGGAGCGTGGTCCATGAGCCATGGACCATaGAAACGCCTTCAAGCAGCGCTGGGTGCTCCGATCAAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: VHFRFLGAWSMSHGP*KRLQAALGAPIKAE
Trigger: TTCTGCTTTGATCGGAGCACCCAGCGCTGCTTGAAGGCGTTTGCATGGTCCATGGCTCATGGACCACGCTCCTAGAAAACGGAAATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS CCA 90 bp TGGTACCTGCAGCCACTGCTCAAGACGCTGAGCTTCACCTCGCTCTaGTCAGCCTTGGAGAAAACCAAGTTCTGGACTGTCTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: WYLQPLLKTLSFTSL*SALEKTKFWTVLCS
Trigger: ACTGCACAAGACAGTCCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCGAGGTGAAGCTCAGCGTCTTGAGCAGTGGCTGCAGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CCA 90 bp CAGATGCTGGACAAACGGGATCCTCTGTCCCAGCTGGGATCTCAGTaGAATGGAGATGAGCAGAGTAGAAAGAGCACATCCCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: QMLDKRDPLSQLGSQ*NGDEQSRKSTSHRA
Trigger: AGCCCTGTGGGATGTGCTCTTTCTACTCTGCTCATCTCCATTCCACTGAGATCCCAGCTGGGACAGAGGATCCCGTTTGTCCAGCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGAACGCCACCCCCAGCTaGCTGAAGTTGTCCACACTT +
Preference number: 5 (lower is better)
Translates to: INVSPSHRGESNFPPVGGNATPS*LKLSTL
Trigger: AAGTGTGGACAACTTCAGCAAGCTGGGGGTGGCGTT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAAACGCCACCCCCAGCTaGCTGAAGTTGTCCACACTT +
Preference number: 5 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARNATPS*LKLSTL
Trigger: AAGTGTGGACAACTTCAGCAAGCTGGGGGTGGCGTT...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGCTGCCTCTCCTTTGTTaGGGTTCTTCACCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVLPLLC*GSSPRA
Trigger: GGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAG...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGCCTTTCCCGTGAGGTaGACTCTCCTCCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: MWYECAFISSCQSQIAHLAFPVR*TLLPSL
Trigger: AAGAGAAGGGAGGAGAGTCAACCTCACGGGAAAGGC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGAGCCTTTCCCGTGAGGTaGACTCTCCTCCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: CFKAASSLSGQLSLLREGAFPVR*TLLPSL
Trigger: AAGAGAAGGGAGGAGAGTCAACCTCACGGGAAAGGC...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCACCAACAGCAGACAGTaGTCCGTCCACGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LSHQATSACCSETQPRFSTNSRQ*SVHGSL
Trigger: CAGAGACCCGTGGACGGACAACTGTCTGCTGTTGGT...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAACCAACAGCAGACAGTaGTCCGTCCACGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPTNSRQ*SVHGSL
Trigger: CAGAGACCCGTGGACGGACAACTGTCTGCTGTTGGT...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATACCAGGAGACGCATCGTaGTGGGGGTCACTTCGGCAA +
Preference number: 5 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIPGDAS*WGSLRQ
Trigger: TTGCCGAAGTGACCCCCACAACGATGCGTCTCCTGG...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATACAACGATGGACACCTTaGGTCCCTCTGCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIQRWTP*VPLRCP
Trigger: TGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTTG...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAAGCATGTCGAAGGAGTaGCCGTCCGGGTGCACAGTC +
Preference number: 5 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSISMSKE*PSGCTV
Trigger: GACTGTGCACCCGGACGGCAACTCCTTCGACATGCT...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTTCCTCAAGAGTCCCCTaGAAACCCGTTACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PAGKHRAQQYARNISIAFSSRVP*KPVTSL
Trigger: CAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGA...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTGTATATGCTGTGCCTaGGGGGACCCCCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPCICCA*GDPQRL
Trigger: CAGCCTCTGGGGGTCCCCCAAGGCACAGCATATACA...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS TCA 90 bp GGTTCAGGCTTCGGCTCTAGGATCTGGGCTTGCTTGTTTGAGACCTaGTCCTTAACTTCCTTCAGAGTGGAGTCCTGCAAGTGCACCGAC +
Preference number: 5 (lower is better)
Translates to: GSGFGSRIWACLFET*SLTSFRVESCKCTD
Trigger: GTCGGTGCACTTGCAGGACTCCACTCTGAAGGAAGTTAAGGATCAGGTCTCAAACAAGCAAGCCCAGATCCTAGAGCCGAAGCCTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000427746.1
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 90 bp CAGTGCACCCTTGCTTGTCACCTGAAAGCCACCAAAGGTGAAGGATaGAGACAGGCCCAACACCTTCCCTCCCTGAGAAAGATAGGCCAT +
Preference number: 5 (lower is better)
Translates to: QCTLACHLKATKGEG*RQAQHLPSLRKIGH
Trigger: ATGGCCTATCTTTCTCAGGGAGGGAAGGTGTTGGGCCTGTCTTCATCCTTCACCTTTGGTGGCTTTCAGGTGACAAGCAAGGGTGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CCA 90 bp AGAGGCACTGCCTCTCCTTTGTTTGGGTTCTTCACCAAGAGCCTTTaGGTCATCTCTGCCAACATGCTCCATACCGTCCTGCTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: RGTASPLFGFFTKSL*VISANMLHTVLLRL
Trigger: AAGCCTGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CCA 90 bp GCCACGGACATCAGATGCTGGACAAACGGGATCCTCTGTCCCAGCTaGGATCTCAGTGGAATGGAGATGAGCAGAGTAGAAAGAGCACAT +
Preference number: 5 (lower is better)
Translates to: ATDIRCWTNGILCPS*DLSGMEMSRVERAH
Trigger: ATGTGCTCTTTCTACTCTGCTCATCTCCATTCCACTGAGATCCCAGCTGGGACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTCCCAGCTTGCTGAAGTaGTCCACACTTGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: PAGKHRAQQYARNISIAFPSLLK*STLASA
Trigger: TGCTGAAGCAAGTGTGGACAACTTCAGCAAGCTGGG...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGAACGCCACCCCCAGCTaGCTGAAGTTGTCCACACTT +
Preference number: 5 (lower is better)
Translates to: FLKSPLETRYQPGREDILNATPS*LKLSTL
Trigger: AAGTGTGGACAACTTCAGCAAGCTGGGGGTGGCGTT...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGGGCACTGCCTCTCCTTaGTTTGGGTTCTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQGTASP*FGFFTK
Trigger: CTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCC...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTTCGCTCTGGTCAGCCTaGGAGAAAACCAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: PAGKHRAQQYARNISIAFSLWSA*EKTKFW
Trigger: CCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCGA...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGTCGCTCTGGTCAGCCTaGGAGAAAACCAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQSLWSA*EKTKFW
Trigger: CCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCGA...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCCCAGGAGACGCATCGTaGTGGGGGTCACTTCGGCAA +
Preference number: 5 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAPGDAS*WGSLRQ
Trigger: TTGCCGAAGTGACCCCCACAACGATGCGTCTCCTGG...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTGCTGCCCAGATGGACTaGCTGACCACTGTGGACCCA +
Preference number: 5 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIAAQMD*LTTVDP
Trigger: TGGGTCCACAGTGGTCAGCAAGTCCATCTGGGCAGC...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCCAACGATGGACACCTTaGGTCCCTCTGCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAQRWTP*VPLRCP
Trigger: TGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTTG...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS TCA 90 bp ACCAAGTTCTGGACTGTCTTGTGCAGTGCACCCTTGCTTGTCACCTaGAAGCCACCAAAGGTGAAGGATGAAGACAGGCCCAACACCTTC +
Preference number: 5 (lower is better)
Translates to: TKFWTVLCSAPLLVT*KPPKVKDEDRPNTF
Trigger: GAAGGTGTTGGGCCTGTCTTCATCCTTCACCTTTGGTGGCTTTCAGGTGACAAGCAAGGGTGCACTGCACAAGACAGTCCAGAACTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 90 bp TTCAAGTCTTCAATGGACTGGAAGATGATGGCATCCAGCCCCCATTaGAGCACCTCGAACAAGAAAAACGCCGAGTCCGAAGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: FKSSMDWKMMASSPH*STSNKKNAESEEPG
Trigger: GCCTGGCTCTTCGGACTCGGCGTTTTTCTTGTTCGAGGTGCTTCAATGGGGGCTGGATGCCATCATCTTCCAGTCCATTGAAGACTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448340.5
CDS GCA 90 bp TCCCTTCTCTTTCGGGGGAGGTCTCATCAGCAACACTCTCCAAACTaGTGCTATAATCGTAGGGAAGGTCTGGAATGTTCTCGGCAGACG +
Preference number: 5 (lower is better)
Translates to: SLLFRGRSHQQHSPN*CYNRREGLECSRQT
Trigger: CGTCTGCCGAGAACATTCCAGACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTGCTGATGAGACCTCCCCCGAAAGAGAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CCA 90 bp AATCTAAGTGCATTTCCGTTTTCTAGGAGCGTGGTCCATGAGCCATaGACCATGCAAACGCCTTCAAGCAGCGCTGGGTGCTCCGATCAA +
Preference number: 5 (lower is better)
Translates to: NLSAFPFSRSVVHEP*TMQTPSSSAGCSDQ
Trigger: TTGATCGGAGCACCCAGCGCTGCTTGAAGGCGTTTGCATGGTCCATGGCTCATGGACCACGCTCCTAGAAAACGGAAATGCACTTAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS CCA 90 bp AGCCAGGCCTTGAACACACGATTCCTGTCTATAAATAACTCCCCCTaGGGAATAAAAAGCAGGATCCAAGGCAGGAAACCCGAGCCGTGG +
Preference number: 5 (lower is better)
Translates to: SQALNTRFLSINNSP*GIKSRIQGRKPEPW
Trigger: CCACGGCTCGGGTTTCCTGCCTTGGATCCTGCTTTTTATTCCCCAGGGGGAGTTATTTATAGACAGGAATCGTGTGTTCAAGGCCTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448340.5
CDS-3UTR CAA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGCCCAGCTTGCTGAAGTaGTCCACACTTGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: FLKSPLETRYQPGREDILPSLLK*STLASA
Trigger: TGCTGAAGCAAGTGTGGACAACTTCAGCAAGCTGGG...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGACACCGACACAATCTTTaGGGGTACCAGTCCATTATC +
Preference number: 5 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGHRHNL*GYQSII
Trigger: GATAATGGACTGGTACCCCAAAAGATTGTGTCGGTG...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGGAGTTTGCACTATGTaGGAGCTGGGAGGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: MWYECAFISSCQSQIAHLGVCTM*ELGGSS
Trigger: AGAACTACCTCCCAGCTCCAACATAGTGCAAACTCC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATGTGGTATGAGTGTGCCTTCATCTCCAGCTGTCAGAGCCAAATCGCCCACCTCGAGAAGGCCTCCATGTaGGTCACCACAGGTATACAA +
Preference number: 5 (lower is better)
Translates to: MWYECAFISSCQSQIAHLEKASM*VTTGIQ
Trigger: TTGTATACCTGTGGTGACCAACATGGAGGCCTTCTC...GAGGTGGGCGATTTGGCTCTGACAGCTGGAGATGAAGGCACACTCATACCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGGAGAAGGCCTCCATGTaGGTCACCACAGGTATACAA +
Preference number: 5 (lower is better)
Translates to: INVSPSHRGESNFPPVGGEKASM*VTTGIQ
Trigger: TTGTATACCTGTGGTGACCAACATGGAGGCCTTCTC...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGATCTGTGATGAGGTCGTaGATGCAGATGGTAGGGTTA +
Preference number: 5 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGSVMRS*MQMVGL
Trigger: TAACCCTACCATCTGCATCAACGACCTCATCACAGA...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAGCTGCCCAGATGGACTaGCTGACCACTGTGGACCCA +
Preference number: 5 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLAAQMD*LTTVDP
Trigger: TGGGTCCACAGTGGTCAGCAAGTCCATCTGGGCAGC...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTCAACGATGGACACCTTaGGTCCCTCTGCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCQRWTP*VPLRCP
Trigger: TGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTTG...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCAGCATGTCGAAGGAGTaGCCGTCCGGGTGCACAGTC +
Preference number: 5 (lower is better)
Translates to: SCTVLQECSTFQSKSETGSMSKE*PSGCTV
Trigger: GACTGTGCACCCGGACGGCAACTCCTTCGACATGCT...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTACCCCAGTCGGCCACTaGCTCTCACATCAGGCAACG +
Preference number: 5 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVTPVGH*LSHQAT
Trigger: CGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGGT...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATTGTATATGCTGTGCCTaGGGGGACCCCCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDCICCA*GDPQRL
Trigger: CAGCCTCTGGGGGTCCCCCAAGGCACAGCATATACA...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS GCA 90 bp CTTCTCTTTCGGGGGAGGTCTCATCAGCAACACTCTCCAAACTGCTaGTATAATCGTAGGGAAGGTCTGGAATGTTCTCGGCAGACGCAA +
Preference number: 5 (lower is better)
Translates to: LLFRGRSHQQHSPNC*YNRREGLECSRQTQ
Trigger: TTGCGTCTGCCGAGAACATTCCAGACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTGCTGATGAGACCTCCCCCGAAAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 90 bp TTGGTAAGAGAGGATGATCAATGGAACAGGACTCCTCTGAGCAGATaGAGACCTGCTCACACCTTACCCATCCAGGAGACGCATCGTTGT +
Preference number: 5 (lower is better)
Translates to: LVREDDQWNRTPLSR*RPAHTLPIQETHRC
Trigger: ACAACGATGCGTCTCCTGGATGGGTAAGGTGTGAGCAGGTCTGCATCTGCTCAGAGGAGTCCTGTTCCATTGATCATCCTCTCTTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482273.1
CDS-3UTR CAA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTCGGCAGACGCAAACTaGACTGACTCAATGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPSADAN*TDSMVL
Trigger: CAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCGA...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCCTTTCCCGTGAGGTaGACTCTCCTCCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAAFPVR*TLLPSL
Trigger: AAGAGAAGGGAGGAGAGTCAACCTCACGGGAAAGGC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAGAGAAGGCCTCCATGTaGGTCACCACAGGTATACAA +
Preference number: 5 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTEKASM*VTTGIQ
Trigger: TTGTATACCTGTGGTGACCAACATGGAGGCCTTCTC...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTCCAGGAGACGCATCGTaGTGGGGGTCACTTCGGCAA +
Preference number: 5 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSPGDAS*WGSLRQ
Trigger: TTGCCGAAGTGACCCCCACAACGATGCGTCTCCTGG...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CCTGCTGGAAAGCACAGAGCACAGCAGTATGCCCGGAACATCTCCATAGCCTTTTCTGTGATGAGGTCGTaGATGCAGATGGTAGGGTTA +
Preference number: 5 (lower is better)
Translates to: PAGKHRAQQYARNISIAFSVMRS*MQMVGL
Trigger: TAACCCTACCATCTGCATCAACGACCTCATCACAGA...AAAGGCTATGGAGATGTTCCGGGCATACTGCTGTGCTCTGTGCTTTCCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTAGCATGTCGAAGGAGTaGCCGTCCGGGTGCACAGTC +
Preference number: 5 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSSMSKE*PSGCTV
Trigger: GACTGTGCACCCGGACGGCAACTCCTTCGACATGCT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GCCCTCCTGGTGAACCTGGAGGAAGCCAGAATCGTCCAGGCCAACGATGGACACTTAAGGATTCTGAACTaGATCCTGTCTCTTCACAAT +
Preference number: 5 (lower is better)
Translates to: ALLVNLEEARIVQANDGHLRILN*ILSLHN
Trigger: ATTGTGAAGAGACAGGATCAAGTTCAGAATCCTTAA...GTGTCCATCGTTGGCCTGGACGATTCTGGCTTCCTCCAGGTTCACCAGGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CAA 90 bp TCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGCGTCTCGGGGATTAGCCTCGAGATCTTaGTCCCTGATGATATTCTGC +
Preference number: 5 (lower is better)
Translates to: SKLDFQMHGHGQAAASRGLASRS*SLMIFC
Trigger: GCAGAATATCATCAGGGACAAAGATCTCGAGGCTAA...TCCCCGAGACGCGGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS TCA 90 bp ATCGTAGGGAAGGTCTGGAATGTTCTCGGCAGACGCAAACTTGACTaGCTCAATGGTGCTGTTCTCAAGTTCCAGACACTCGTGGCAACT +
Preference number: 5 (lower is better)
Translates to: IVGKVWNVLGRRKLD*LNGAVLKFQTLVAT
Trigger: AGTTGCCACGAGTGTCTGGAACTTGAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCGAGAACATTCCAGACCTTCCCTACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 90 bp TTCCTCTACAACTCTATCCCCTCCCCGTCTATTGGTAAGAGAGGATaGTCAATGGAACAGGACTCCTCTGAGCAGATGCAGACCTGCTCA +
Preference number: 5 (lower is better)
Translates to: FLYNSIPSPSIGKRG*SMEQDSSEQMQTCS
Trigger: TGAGCAGGTCTGCATCTGCTCAGAGGAGTCCTGTTCCATTGATCATCCTCTCTTACCAATAGACGGGGAGGGGATAGAGTTGTAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482273.1
CDS CCA 90 bp ACAACTCTATCCCCTCCCCGTCTATTGGTAAGAGAGGATGATCAATaGAACAGGACTCCTCTGAGCAGATGCAGACCTGCTCACACCTTA +
Preference number: 5 (lower is better)
Translates to: TTLSPPRLLVREDDQ*NRTPLSRCRPAHTL
Trigger: TAAGGTGTGAGCAGGTCTGCATCTGCTCAGAGGAGTCCTGTTCCATTGATCATCCTCTCTTACCAATAGACGGGGAGGGGATAGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482273.1
CDS-3UTR CAA 90 bp TTCCTCAAGAGTCCCCTTGAAACCCGTTACCAGCCTGGAAGGGAGGATATCTTGCACCGACACAATCTTTaGGGGTACCAGTCCATTATC +
Preference number: 5 (lower is better)
Translates to: FLKSPLETRYQPGREDILHRHNL*GYQSII
Trigger: GATAATGGACTGGTACCCCAAAAGATTGTGTCGGTG...CAAGATATCCTCCCTTCCAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCCTGCCTCTCCTTTGTTaGGGTTCTTCACCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAALPLLC*GSSPRA
Trigger: GGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAG...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCGGCACTGCCTCTCCTTaGTTTGGGTTCTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAGTASP*FGFFTK
Trigger: CTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCC...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATGCCTTTCCCGTGAGGTaGACTCTCCTCCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDAFPVR*TLLPSL
Trigger: AAGAGAAGGGAGGAGAGTCAACCTCACGGGAAAGGC...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCGCAGTGCACCCTTGCTaGTCACCTGAAAGCCACCAA +
Preference number: 5 (lower is better)
Translates to: SCTVLQECSTFQSKSETGAVHPC*SPESHQ
Trigger: TTGGTGGCTTTCAGGTGACAAGCAAGGGTGCACTGC...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGCAGTGCACCCTTGCTaGTCACCTGAAAGCCACCAA +
Preference number: 5 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCAVHPC*SPESHQ
Trigger: TTGGTGGCTTTCAGGTGACAAGCAAGGGTGCACTGC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTCGCTCTGGTCAGCCTaGGAGAAAACCAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFSLWSA*EKTKFW
Trigger: CCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCGA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTGGAGTTTGCACTATGTaGGAGCTGGGAGGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPGVCTM*ELGGSS
Trigger: AGAACTACCTCCCAGCTCCAACATAGTGCAAACTCC...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAAAAATCTTCTGGAGTTaGCACTATGTTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARKIFWS*HYVGAG
Trigger: CCCAGCTCCAACATAGTGCAAACTCCAGAAGATTTT...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGAAAATCTTCTGGAGTTaGCACTATGTTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQKIFWS*HYVGAG
Trigger: CCCAGCTCCAACATAGTGCAAACTCCAGAAGATTTT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTCAACGATGGACACCTTaGGTCCCTCTGCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: EKAWRTSGNSECISKGFIQRWTP*VPLRCP
Trigger: TGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTTG...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCGGCATTACCGCCGTTaGGGGAGGATGAGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFRHYRR*GRMRFL
Trigger: GAGAAACCTCATCCTCCCCAAACGGCGGTAATGCCG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTCGGCATTACCGCCGTTaGGGGAGGATGAGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSRHYRR*GRMRFL
Trigger: GAGAAACCTCATCCTCCCCAAACGGCGGTAATGCCG...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATTAGCCTCGAGATCTTaGTCCCTGATGATATTCTGC +
Preference number: 5 (lower is better)
Translates to: CFKAASSLSGQLSLLREGLASRS*SLMIFC
Trigger: GCAGAATATCATCAGGGACAAAGATCTCGAGGCTAA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTTCCTCAAGAGTCCCCTaGAAACCCGTTACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVSSRVP*KPVTSL
Trigger: CAGGCTGGTAACGGGTTTCAAGGGGACTCTTGAGGA...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGCAGGAAGCCCAGTTATaGCTGTGTTCTATTTTAGGG +
Preference number: 5 (lower is better)
Translates to: INVSPSHRGESNFPPVGGQEAQL*LCSILG
Trigger: CCCTAAAATAGAACACAGCAATAACTGGGCTTCCTG...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTACCCCAGTCGGCCACTaGCTCTCACATCAGGCAACG +
Preference number: 5 (lower is better)
Translates to: EKAWRTSGNSECISKGFITPVGH*LSHQAT
Trigger: CGTTGCCTGATGTGAGAGCAAGTGGCCGACTGGGGT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS TCA 90 bp TATAATCGTAGGGAAGGTCTGGAATGTTCTCGGCAGACGCAAACTTaGCTGACTCAATGGTGCTGTTCTCAAGTTCCAGACACTCGTGGC +
Preference number: 5 (lower is better)
Translates to: YNRREGLECSRQTQT*LTQWCCSQVPDTRG
Trigger: GCCACGAGTGTCTGGAACTTGAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCGAGAACATTCCAGACCTTCCCTACGATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 90 bp TGTTTGGGTTCTTCACCAAGAGCCTTTGGGTCATCTCTGCCAACATaGTCCATACCGTCCTGCTCAGGCTTAATCTCAAGAGAAGGTTCA +
Preference number: 5 (lower is better)
Translates to: CLGSSPRAFGSSLPT*SIPSCSGLISREGS
Trigger: TGAACCTTCTCTTGAGATTAAGCCTGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAAGAACCCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000427746.1
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTGACCACTTGACAATCTaGGAAGGTTACTGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFDHLTI*EGYWEH
Trigger: GTGCTCCCAGTAACCTTCCAAGATTGTCAAGTGGTC...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR CAA 90 bp TCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTCACCGACACAATCTTTaGGGGTACCAGTCCATTATC +
Preference number: 5 (lower is better)
Translates to: SHIRQRQPAAVKLNHDFPHRHNL*GYQSII
Trigger: GATAATGGACTGGTACCCCAAAAGATTGTGTCGGTG...AGGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCCTGCCTCTCCTTTGTTaGGGTTCTTCACCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SCTVLQECSTFQSKSETGLPLLC*GSSPRA
Trigger: GGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAG...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTAGGCACTGCCTCTCCTTaGTTTGGGTTCTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLGTASP*FGFFTK
Trigger: CTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCC...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCGGCACTGCCTCTCCTTaGTTTGGGTTCTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: SCTVLQECSTFQSKSETGGTASP*FGFFTK
Trigger: CTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCC...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AATCCACAGCCTGGACAAAAACAAACAATTGAGCAGCTCAGCCTGTTGATGGCATCGGCAGACGCAAACTaGACTGACTCAATGGTGCTG +
Preference number: 5 (lower is better)
Translates to: NPQPGQKQTIEQLSLLMASADAN*TDSMVL
Trigger: CAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCGA...TGCCATCAACAGGCTGAGCTGCTCAATTGTTTGTTTTTGTCCAGGCTGTGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CAA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGCCTTTCCCGTGAGGTaGACTCTCCTCCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSAFPVR*TLLPSL
Trigger: AAGAGAAGGGAGGAGAGTCAACCTCACGGGAAAGGC...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGACCAACAGCAGACAGTaGTCCGTCCACGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: NETYIVSLEIFVPDDILQTNSRQ*SVHGSL
Trigger: CAGAGACCCGTGGACGGACAACTGTCTGCTGTTGGT...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTGCAGTGCACCCTTGCTaGTCACCTGAAAGCCACCAA +
Preference number: 5 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFAVHPC*SPESHQ
Trigger: TTGGTGGCTTTCAGGTGACAAGCAAGGGTGCACTGC...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTAAGTTCTGGACTGTCTaGTGCAGTGCACCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIKFWTV*CSAPLL
Trigger: AAGCAAGGGTGCACTGCACAAGACAGTCCAGAACTT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCAAGTTCTGGACTGTCTaGTGCAGTGCACCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAKFWTV*CSAPLL
Trigger: AAGCAAGGGTGCACTGCACAAGACAGTCCAGAACTT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAAAAATCTTCTGGAGTTaGCACTATGTTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTKIFWS*HYVGAG
Trigger: CCCAGCTCCAACATAGTGCAAACTCCAGAAGATTTT...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTGAGAAGGCCTCCATGTaGGTCACCACAGGTATACAA +
Preference number: 5 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIEKASM*VTTGIQ
Trigger: TTGTATACCTGTGGTGACCAACATGGAGGCCTTCTC...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATCCAGGAGACGCATCGTaGTGGGGGTCACTTCGGCAA +
Preference number: 5 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHPGDAS*WGSLRQ
Trigger: TTGCCGAAGTGACCCCCACAACGATGCGTCTCCTGG...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGGCCTTGTGTTGTTTATaGTATTCTGTGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: INVSPSHRGESNFPPVGGALCCL*YSVMRS
Trigger: CGACCTCATCACAGAATACAATAAACAACACAAGGC...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCTCCTTGAGATCCCAGGTTGCGGGGTGCATAAATGGCCCAAATCGGAGAGTGTACAATGAAGGGATTTaGTTCAAAGCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLRSQVAGCINGPNRRVYNEGI*FKAESS
Trigger: GGAGCTTTCAGCTTTGAACAAAATCCCTTCATTGTA...CACTCTCCGATTTGGGCCATTTATGCACCCCGCAACCTGGGATCTCAAGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TCCAGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGAGTCCATTTTGTAATTaGGGGATGGTGTGGACTTGT +
Preference number: 5 (lower is better)
Translates to: SSCQSQIAHLLIQVMPNQSPFCN*GMVWTC
Trigger: ACAAGTCCACACCATCCCCAAATTACAAAATGGACT...CTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATAAACGTAAGTCCAAGCCACAGAGGGGAGAGCAATTTCCCACCTGTGGGAGGGAGTCCATTTTGTAATTaGGGGATGGTGTGGACTTGT +
Preference number: 5 (lower is better)
Translates to: INVSPSHRGESNFPPVGGSPFCN*GMVWTC
Trigger: ACAAGTCCACACCATCCCCAAATTACAAAATGGACT...CCCTCCCACAGGTGGGAAATTGCTCTCCCCTCTGTGGCTTGGACTTACGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CTCTCACATCAGGCAACGTCAGCCTGCTGCAGTGAAACTCAACCACGATTTTCCTTAGCCTCGAGATCTTaGTCCCTGATGATATTCTGC +
Preference number: 5 (lower is better)
Translates to: LSHQATSACCSETQPRFSLASRS*SLMIFC
Trigger: GCAGAATATCATCAGGGACAAAGATCTCGAGGCTAA...GGAAAATCGTGGTTGAGTTTCACTGCAGCAGGCTGACGTTGCCTGATGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAGGAAGGGAGGATATCTaGCCTTTTACAAAATACGGT +
Preference number: 5 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARGREDI*PFTKYG
Trigger: ACCGTATTTTGTAAAAGGCAAGATATCCTCCCTTCC...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACACAGGAAGCCCAGTTATaGCTGTGTTCTATTTTAGGG +
Preference number: 5 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTQEAQL*LCSILG
Trigger: CCCTAAAATAGAACACAGCAATAACTGGGCTTCCTG...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGAAACCACGATTTTCCTTaGCACACAAATCCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARNHDFP*HTNPSY
Trigger: GTAGGAAGGATTTGTGTGCAAAGGAAAATCGTGGTT...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACAAGAAATAGGGCCCACTaGTTCAAGTCTTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTRNRAH*FKSSMD
Trigger: GTCCATTGAAGACTTGAACAAGTGGGCCCTATTTCT...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399120.5
ENST00000612277.4
ENST00000675307.1
CDS TCA 90 bp GATCCCCAGGTCTGCAAGCTAATGGCAAACAACAGTCTGACCACTTaGCAATCTTGGAAGGTTACTGGGAGCACTAAAAGGGATCATCCA +
Preference number: 5 (lower is better)
Translates to: DPQVCKLMANNSLTT*QSWKVTGSTKRDHP
Trigger: TGGATGATCCCTTTTAGTGCTCCCAGTAACCTTCCAAGATTGTCAAGTGGTCAGACTGTTGTTTGCCATTAGCTTGCAGACCTGGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS CCA 90 bp GTCAAGCAAAAGGCTCACTCCCAAAGATCAAAGCTAAGGAAGCCCTaGCTGTCCCTAAACAAAGGAGTTTCCTCCTATAATAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: VKQKAHSQRSKLRKP*LSLNKGVSSYNSSQ
Trigger: CTGGCTGCTATTATAGGAGGAAACTCCTTTGTTTAGGGACAGCCAGGGCTTCCTTAGCTTTGATCTTTGGGAGTGAGCCTTTTGCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CAA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATACAACAGTCTGACCACTaGACAATCTTGGAAGGTTAC +
Preference number: 5 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIQQSDH*TILEGY
Trigger: GTAACCTTCCAAGATTGTCAAGTGGTCAGACTGTTG...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000612277.4
CDS-3UTR CAA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTCCCAGCTTGCTGAAGTaGTCCACACTTGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFPSLLK*STLASA
Trigger: TGCTGAAGCAAGTGTGGACAACTTCAGCAAGCTGGG...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGGCACTGCCTCTCCTTaGTTTGGGTTCTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSGTASP*FGFFTK
Trigger: CTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCC...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTTCGGCAGACGCAAACTaGACTGACTCAATGGTGCTG +
Preference number: 5 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFSADAN*TDSMVL
Trigger: CAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCGA...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CGATTTTCCTTTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTAAGTTCTGGACTGTCTaGTGCAGTGCACCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: RFSFAHKSFLLPPLPSRVKFWTV*CSAPLL
Trigger: AAGCAAGGGTGCACTGCACAAGACAGTCCAGAACTT...AACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAAAGGAAAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTGGAGTTTGCACTATGTaGGAGCTGGGAGGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCGVCTM*ELGGSS
Trigger: AGAACTACCTCCCAGCTCCAACATAGTGCAAACTCC...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTTCTGTGATGAGGTCGTaGATGCAGATGGTAGGGTTA +
Preference number: 5 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFSVMRS*MQMVGL
Trigger: TAACCCTACCATCTGCATCAACGACCTCATCACAGA...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GATGGTAGGGTTACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACCGGCATTACCGCCGTTaGGGGAGGATGAGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: DGRVTVSHIKSTAWTKTNRHYRR*GRMRFL
Trigger: GAGAAACCTCATCCTCCCCAAACGGCGGTAATGCCG...GTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS TCA 90 bp TCCCCAACTGCTTGGTCTGCAGATTTTGGCGATAGATCTCTAAGTTaGAATGTTCTGATGAGAAGGCCTCCATGTTGGTCACCACAGGTA +
Preference number: 5 (lower is better)
Translates to: SPTAWSADFGDRSLS*NVLMRRPPCWSPQV
Trigger: TACCTGTGGTGACCAACATGGAGGCCTTCTCATCAGAACATTTCAACTTAGAGATCTATCGCCAAAATCTGCAGACCAAGCAGTTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000482273.1
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGCTGCCTCTCCTTTGTTaGGGTTCTTCACCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: NETYIVSLEIFVPDDILQLPLLC*GSSPRA
Trigger: GGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAG...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTTCGCTCTGGTCAGCCTaGGAGAAAACCAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: EKAWRTSGNSECISKGFISLWSA*EKTKFW
Trigger: CCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCGA...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTGGAGTTTGCACTATGTaGGAGCTGGGAGGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFGVCTM*ELGGSS
Trigger: AGAACTACCTCCCAGCTCCAACATAGTGCAAACTCC...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTAAAATCTTCTGGAGTTaGCACTATGTTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIKIFWS*HYVGAG
Trigger: CCCAGCTCCAACATAGTGCAAACTCCAGAAGATTTT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TTCACCTACAACTCTAAATTAGATTTCCAGATGCATGGGCACGGACAGGCAGCCAAAATCTTCTGGAGTTaGCACTATGTTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: FTYNSKLDFQMHGHGQAAKIFWS*HYVGAG
Trigger: CCCAGCTCCAACATAGTGCAAACTCCAGAAGATTTT...GGCTGCCTGTCCGTGCCCATGCATCTGGAAATCTAATTTAGAGTTGTAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAGAGAAGGCCTCCATGTaGGTCACCACAGGTATACAA +
Preference number: 5 (lower is better)
Translates to: NQVYGKRSICFKAASSLSEKASM*VTTGIQ
Trigger: TTGTATACCTGTGGTGACCAACATGGAGGCCTTCTC...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTTCTGTGATGAGGTCGTaGATGCAGATGGTAGGGTTA +
Preference number: 5 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCSVMRS*MQMVGL
Trigger: TAACCCTACCATCTGCATCAACGACCTCATCACAGA...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ACAAACAGTGATAGCATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATAGCCTTGTGTTGTTTATaGTATTCTGTGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: TNSDSIPLTHHWPGRKSIALCCL*YSVMRS
Trigger: CGACCTCATCACAGAATACAATAAACAACACAAGGC...TATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTATGCTATCACTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGATTAAGGATTCTGAACTaGATCCTGTCTCTTCACAAT +
Preference number: 5 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARLRILN*ILSLHN
Trigger: ATTGTGAAGAGACAGGATCAAGTTCAGAATCCTTAA...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATACAATGAAGGGATTTaGTTCAAAGCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTYNEGI*FKAESS
Trigger: GGAGCTTTCAGCTTTGAACAAAATCCCTTCATTGTA...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TGCTTCAAGGCTGCTTCATCTCTCTCAGGACAACTGAGTCTCCTGCGTGAGGGATTTGAGAAGTTAAAATaGCAGAGGCTTACGCTTTCT +
Preference number: 5 (lower is better)
Translates to: CFKAASSLSGQLSLLREGFEKLK*QRLTLS
Trigger: AGAAAGCGTAAGCCTCTGCAATTTTAACTTCTCAAA...TCCCTCACGCAGGAGACTCAGTTGTCCTGAGAGAGATGAAGCAGCCTTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp GCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAGATTTGAGAAGTTAAAATaGCAGAGGCTTACGCTTTCT +
Preference number: 5 (lower is better)
Translates to: AHKSFLLPPLPSRVPSARFEKLK*QRLTLS
Trigger: AGAAAGCGTAAGCCTCTGCAATTTTAACTTCTCAAA...TCTGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTAGAAATAGGGCCCACTaGTTCAAGTCTTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIRNRAH*FKSSMD
Trigger: GTCCATTGAAGACTTGAACAAGTGGGCCCTATTTCT...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399120.5
ENST00000612277.4
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCAGAACGACACTCCGTaGTTTCTGAAGAGGATGATC +
Preference number: 5 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDQNDTP*FLKRMI
Trigger: GATCATCCTCTTCAGAAACAACGGAGTGTCGTTCTG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CAA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAGCTCTAGTAACAAATaGGATGGAGCAAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFSSSNK*DGARLE
Trigger: TTCCAGCCTTGCTCCATCCAATTTGTTACTAGAGCT...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CAA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAGAAATAGGGCCCACTaGTTCAAGTCTTCAATGGAT +
Preference number: 5 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFRNRAH*FKSSMD
Trigger: ATCCATTGAAGACTTGAACAAGTGGGCCCTATTTCT...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000675057.1
CDS-3UTR CAA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATCCCAGCTTGCTGAAGTaGTCCACACTTGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHPSLLK*STLASA
Trigger: TGCTGAAGCAAGTGTGGACAACTTCAGCAAGCTGGG...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTAAGTTCTGGACTGTCTaGTGCAGTGCACCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: EKAWRTSGNSECISKGFIKFWTV*CSAPLL
Trigger: AAGCAAGGGTGCACTGCACAAGACAGTCCAGAACTT...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCTGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTAAGGATTCTGAACTaGATCCTGTCTCTTCACAAT +
Preference number: 5 (lower is better)
Translates to: SCQSQIAHLLIQVMPNQTLRILN*ILSLHN
Trigger: ATTGTGAAGAGACAGGATCAAGTTCAGAATCCTTAA...TGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTTTAGCCTCGAGATCTTaGTCCCTGATGATATTCTGC +
Preference number: 5 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCLASRS*SLMIFC
Trigger: GCAGAATATCATCAGGGACAAAGATCTCGAGGCTAA...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTAAGGATCAGGAAGCCCAGTTATaGCTGTGTTCTATTTTAGGG +
Preference number: 5 (lower is better)
Translates to: SQIAHLLIQVMPNQTFKDQEAQL*LCSILG
Trigger: CCCTAAAATAGAACACAGCAATAACTGGGCTTCCTG...ATCCTTAAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TTGCACACAAATCCTTCCTACTTCCACCACTCCCTAGCAGAGTTCCCAGTGCCAACTAAAGCTCTTGACTaGATGTTACAATGTATGGCA +
Preference number: 5 (lower is better)
Translates to: LHTNPSYFHHSLAEFPVPTKALD*MLQCMA
Trigger: TGCCATACATTGTAACATCAAGTCAAGAGCTTTAGT...TGGCACTGGGAACTCTGCTAGGGAGTGGTGGAAGTAGGAAGGATTTGTGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CAA 90 bp CACACCACCGGGTGGACAGTAACTCTTGGAAGTCTGTCTTCCCTTTTCTTCATTCGTGTCTCTAACCACTaGAAGAGTGACATGTATTTC +
Preference number: 5 (lower is better)
Translates to: HTTGWTVTLGSLSSLFFIRVSNH*KSDMYF
Trigger: GAAATACATGTCACTCTTCAAGTGGTTAGAGACACG...AATGAAGAAAAGGGAAGACAGACTTCCAAGAGTTACTGTCCACCCGGTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CAA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAATCGCTCTGGTCAGCCTaGGAGAAAACCAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKSLWSA*EKTKFW
Trigger: CCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCGA...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGCTCTGAGAGAGGGCTaGCCTTATATTACAAAGTCT +
Preference number: 5 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSALREG*PYITKS
Trigger: AGACTTTGTAATATAAGGCAAGCCCTCTCTCAGAGC...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GATGCCCTCTCAAGGGTAAGTCCATTTTGTAATTTGGGGATGGTGTGGACTTGTAACCACGATTTTCCTTaGCACACAAATCCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: DALSRVSPFCNLGMVWTCNHDFP*HTNPSY
Trigger: GTAGGAAGGATTTGTGTGCAAAGGAAAATCGTGGTT...ACAAGTCCACACCATCCCCAAATTACAAAATGGACTTACCCTTGAGAGGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TATTCCGTGAGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTAGAAATAGGGCCCACTaGTTCAAGTCTTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: YSVSCTVLQECSTFQSKSRNRAH*FKSSMD
Trigger: GTCCATTGAAGACTTGAACAAGTGGGCCCTATTTCT...AGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCTCACGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399120.5
ENST00000612277.4
ENST00000675307.1
CDS-3UTR CAA 90 bp TGTCAGAGCCAAATCGCCCACCTCCTCATCCAAGTGATGCCTAATCAGACATTTCAGGACACTTTAAATTaGCACTTCGAGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: CQSQIAHLLIQVMPNQTFQDTLN*HFEMET
Trigger: TGTTTCCATCTCGAAGTGCAAATTTAAAGTGTCCTG...AAATGTCTGATTAGGCATCACTTGGATGAGGAGGTGGGCGATTTGGCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS-3UTR CAA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACAACAGTCTGACCACTaGACAATTGTTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLQQSDH*TIVSEE
Trigger: CTCTTCAGAAACAATTGTCAAGTGGTCAGACTGTTG...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp ATACCTCTAACTCACCACTGGCCTGGGCGCAAGAGCATATTTTGGTTTGTTTTTAGAAATAGGGCCCACTaGTTCAAGTCTTCAATGGAT +
Preference number: 5 (lower is better)
Translates to: IPLTHHWPGRKSIFWFVFRNRAH*FKSSMD
Trigger: ATCCATTGAAGACTTGAACAAGTGGGCCCTATTTCT...AAAAACAAACCAAAATATGCTCTTGCGCCCAGGCCAGTGGTGAGTTAGAGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336648.8
ENST00000675057.1
CDS-3UTR CAA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATCACCGACACAATCTTTaGGGGTACCAGTCCATTATC +
Preference number: 5 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHHRHNL*GYQSII
Trigger: GATAATGGACTGGTACCCCAAAAGATTGTGTCGGTG...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTGGAGTTTGCACTATGTaGGAGCTGGGAGGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPGVCTM*ELGGSS
Trigger: AGAACTACCTCCCAGCTCCAACATAGTGCAAACTCC...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTATACAATGAAGGGATTTaGTTCAAAGCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLYNEGI*FKAESS
Trigger: GGAGCTTTCAGCTTTGAACAAAATCCCTTCATTGTA...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGCTCTGAGAGAGGGCTaGCCTTATATTACAAAGTCT +
Preference number: 5 (lower is better)
Translates to: NETYIVSLEIFVPDDILQALREG*PYITKS
Trigger: AGACTTTGTAATATAAGGCAAGCCCTCTCTCAGAGC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AATCAGGTTTATGGAAAACGCAGCATCTGCTTCAAGGCTGCTTCATCTCTCTCAGGAAGGGAGGATATCTaGCCTTTTACAAAATACGGT +
Preference number: 5 (lower is better)
Translates to: NQVYGKRSICFKAASSLSGREDI*PFTKYG
Trigger: ACCGTATTTTGTAAAAGGCAAGATATCCTCCCTTCC...TGAGAGAGATGAAGCAGCCTTGAAGCAGATGCTGCGTTTTCCATAAACCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS TCA 90 bp CACAGGTATACAAGATGGGGTTATTTCTACTTCAGACACGTAGGATaGAACAAATCTAAGAGAGAGCTGGCCGGATTTTATTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: HRYTRWGYFYFRHVG*NKSKRELAGFYFSL
Trigger: GAGGGAGAAATAAAATCCGGCCAGCTCTCTCTTAGATTTGTTTCATCCTACGTGTCTGAAGTAGAAATAACCCCATCTTGTATACCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000482273.1
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 90 bp CTTCTAAAATTGCTTGACTTGAGCAAGTTAAAATCTTCTGGAGTTTaGACTATGTTGGAGCTGGGAGGTAGTTCTAAGTGCACCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LLKLLDLSKLKSSGV*TMLELGGSSKCTWQ
Trigger: TTGCCAGGTGCACTTAGAACTACCTCCCAGCTCCAACATAGTGCAAACTCCAGAAGATTTTAACTTGCTCAAGTCAAGCAATTTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAAAGCTCCAAATCCTTCTGTGATGAGGTCGTaGATGCAGATGGTAGGGTTA +
Preference number: 5 (lower is better)
Translates to: ECSTFQSKSETGLKAPNPSVMRS*MQMVGL
Trigger: TAACCCTACCATCTGCATCAACGACCTCATCACAGA...AGGATTTGGAGCTTTTAAGCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTGCCTTGTGTTGTTTATaGTATTCTGTGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: EKAWRTSGNSECISKGFIALCCL*YSVMRS
Trigger: CGACCTCATCACAGAATACAATAAACAACACAAGGC...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGGGGAGAGCAATTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTATTAAGGATTCTGAACTaGATCCTGTCTCTTCACAAT +
Preference number: 5 (lower is better)
Translates to: RGEQFPTCGRAFPKLNFLLRILN*ILSLHN
Trigger: ATTGTGAAGAGACAGGATCAAGTTCAGAATCCTTAA...TAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAATTGCTCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AGCTGCACAGTCTTGCAGGAATGCTCCACATTTCAGAGTAAATCTGAAACTGGCTTAAGGATTCTGAACTaGATCCTGTCTCTTCACAAT +
Preference number: 5 (lower is better)
Translates to: SCTVLQECSTFQSKSETGLRILN*ILSLHN
Trigger: ATTGTGAAGAGACAGGATCAAGTTCAGAATCCTTAA...GCCAGTTTCAGATTTACTCTGAAATGTGGAGCATTCCTGCAAGACTGTGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATGCTCTGAGAGAGGGCTaGCCTTATATTACAAAGTCT +
Preference number: 5 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHALREG*PYITKS
Trigger: AGACTTTGTAATATAAGGCAAGCCCTCTCTCAGAGC...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp AATGAAACCTACATCGTTAGCCTCGAGATCTTTGTCCCTGATGATATTCTGCAGGGAAGGGAGGATATCTaGCCTTTTACAAAATACGGT +
Preference number: 5 (lower is better)
Translates to: NETYIVSLEIFVPDDILQGREDI*PFTKYG
Trigger: ACCGTATTTTGTAAAAGGCAAGATATCCTCCCTTCC...CTGCAGAATATCATCAGGGACAAAGATCTCGAGGCTAACGATGTAGGTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp GAAAAGGCATGGCGTACATCTGGGAATAGCGAATGCATATCAAAAGGCTTCATTCAACAGTCTGACCACTaGACAATTGTTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: EKAWRTSGNSECISKGFIQQSDH*TIVSEE
Trigger: CTCTTCAGAAACAATTGTCAAGTGGTCAGACTGTTG...AATGAAGCCTTTTGATATGCATTCGCTATTCCCAGATGTACGCCATGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GATGGTAGGGTTACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACGCCTTGTGTTGTTTATaGTATTCTGTGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: DGRVTVSHIKSTAWTKTNALCCL*YSVMRS
Trigger: CGACCTCATCACAGAATACAATAAACAACACAAGGC...GTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CAA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATAGTCCATTTTGTAATTaGGGGATGGTGTGGACTTGT +
Preference number: 5 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHSPFCN*GMVWTC
Trigger: ACAAGTCCACACCATCCCCAAATTACAAAATGGACT...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000675057.1
ENST00000675307.1
CDS-3UTR CAA 90 bp GATGGTAGGGTTACTGTTAGTCACATTAAATCCACAGCCTGGACAAAAACAAACTACAATGAAGGGATTTaGTTCAAAGCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: DGRVTVSHIKSTAWTKTNYNEGI*FKAESS
Trigger: GGAGCTTTCAGCTTTGAACAAAATCCCTTCATTGTA...GTTTGTTTTTGTCCAGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS-3UTR CAA 90 bp GGATATCTTGCCTTTTACAAAATACGGTCGATACTCAATGCACAGCCTCTAAAAAACCACGATTTTCCTTaGCACACAAATCCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: GYLAFYKIRSILNAQPLKNHDFP*HTNPSY
Trigger: GTAGGAAGGATTTGTGTGCAAAGGAAAATCGTGGTT...TTTTAGAGGCTGTGCATTGAGTATCGACCGTATTTTGTAAAAGGCAAGATATCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS-3UTR CAA 90 bp TTTCCCACCTGTGGGAGGGCTTTCCCTAAACTAAATTTTCTACTTCTTAACCATTTTGAGAAGTTAAAATaGCAGAGGCTTACGCTTTCT +
Preference number: 5 (lower is better)
Translates to: FPTCGRAFPKLNFLLLNHFEKLK*QRLTLS
Trigger: AGAAAGCGTAAGCCTCTGCAATTTTAACTTCTCAAA...ATGGTTAAGAAGTAGAAAATTTAGTTTAGGGAAAGCCCTCCCACAGGTGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
CDS TCA 90 bp GGTTGTCAGAATCTCTCTAAGGACTTCGTATCTTCTAAAATTGCTTaGCTTGAGCAAGTTAAAATCTTCTGGAGTTTGCACTATGTTGGA +
Preference number: 5 (lower is better)
Translates to: GCQNLSKDFVSSKIA*LEQVKIFWSLHYVG
Trigger: TCCAACATAGTGCAAACTCCAGAAGATTTTAACTTGCTCAAGTCAAGCAATTTTAGAAGATACGAAGTCCTTAGAGAGATTCTGACAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000482273.1
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 90 bp TCTCAACCTTACAATAAGTATATAAAATGTTTCTCCCATGAGTGTTaGGTTAACCAGAACTCCGCCGATCTTCATGAGGTCACTGTAATA +
Preference number: 5 (lower is better)
Translates to: SQPYNKYIKCFSHEC*VNQNSADLHEVTVI
Trigger: TATTACAGTGACCTCATGAAGATCGGCGGAGTTCTGGTTAACTCAACACTCATGGGAGAAACATTTTATATACTTATTGTAAGGTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS CCA 72 bp TGGACTGCAGGCCTGATACCGGCCGCGGAGCGCTCCTaGCCCCGCTCCCGCCAGGCTCCGGGACCGCTGAAA +
Preference number: 6 (lower is better)
Translates to: WTAGLIPAAERS*PRSRQAPGPLK
Trigger: TTTCAGCGGTCCCGGAGCCTGGCGGGAGCGGGGCCAGGAGCGCTCCGCGGCCGGTATCAGGCCTGCAGTCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675307.1
CDS GCA 72 bp CTTCAATGGATTCTGAGGCCGAAACGCGGCCGCTCCTaGGCCGGGTGGTCGCCCGCGAATCCCTGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: LQWILRPKRGRS*AGWSPANPCRA
Trigger: GGCGCGGCAGGGATTCGCGGGCGACCACCCGGCGCAGGAGCGGCCGCGTTTCGGCCTCAGAATCCATTGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336648.8
ENST00000427746.1
ENST00000675057.1
CDS GCA 72 bp CTGAGACGTCTGGCTCCTGCACAGCGCACTTCCCGCTaGCCTTCTCCACTGGCTGCTCAGGCCCTGCCTCGC +
Preference number: 6 (lower is better)
Translates to: LRRLAPAQRTSR*PSPLAAQALPR
Trigger: GCGAGGCAGGGCCTGAGCAGCCAGTGGAGAAGGGCAGCGGGAAGTGCGCTGTGCAGGAGCCAGACGTCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612277.4
CDS GCA 72 bp CCACCTCTGGCCACACGGGCTGAGACGTCTGGCTCCTaGACAGCGCACTTCCCGCTGCCCTTCTCCACTGGC +
Preference number: 6 (lower is better)
Translates to: PPLATRAETSGS*TAHFPLPFSTG
Trigger: GCCAGTGGAGAAGGGCAGCGGGAAGTGCGCTGTGCAGGAGCCAGACGTCTCAGCCCGTGTGGCCAGAGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612277.4
CDS CCA 72 bp ATGTCCACACAGTCGGCCAGCACAGACCGGACCTCGTaGAACCGGCCGAGGGCTTCCTGGGAGTCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: MSTQSASTDRTS*NRPRASWESEP
Trigger: GGGCTCCGACTCCCAGGAAGCCCTCGGCCGGTTCCACGAGGTCCGGTCTGTGCTGGCCGACTGTGTGGACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CCA 72 bp TTCTTAGGAAACCCACTCACGGGCCTGAGTCCCCCGTaGAAGCGGCGACTTCGGCACCTGGACACCCGAGTC +
Preference number: 6 (lower is better)
Translates to: FLGNPLTGLSPP*KRRLRHLDTRV
Trigger: GACTCGGGTGTCCAGGTGCCGAAGTCGCCGCTTCCACGGGGGACTCAGGCCCGTGAGTGGGTTTCCTAAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448340.5
CDS GCA 72 bp AGCCACACATTCCCTCCCCGTCCTTTGCCCTCGGTCTaGCGGGCCGCGATCACTATTAAGCCCATTTCCTGC +
Preference number: 6 (lower is better)
Translates to: SHTFPPRPLPSV*RAAITIKPISC
Trigger: GCAGGAAATGGGCTTAATAGTGATCGCGGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGAATGTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 72 bp CCCTGCCCAACAGGGGGCATTGGCAGGCAGCAGCTCTaGAGTGAGTGGGGAACAGAAATCTCAACAACCCAC +
Preference number: 6 (lower is better)
Translates to: PCPTGGIGRQQL*SEWGTEISTTH
Trigger: GTGGGTTGTTGAGATTTCTGTTCCCCACTCACTGCAGAGCTGCTGCCTGCCAATGCCCCCTGTTGGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS CAA 90 bp TCTTCGGGAATGGACTCCCTGGTAGCAATGACCAACAGCAGACAGTaGTCCGTCCACGGGTCTCTGAGAGCACTGTCCTCCAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: SSGMDSLVAMTNSRQ*SVHGSLRALSSSRW
Trigger: CCACCTGCTGGAGGACAGTGCTCTCAGAGACCCGTGGACGGACAACTGTCTGCTGTTGGTCATTGCTACCAGGGAGTCCATTCCCGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 72 bp GACCTCACTGCTTCCACGACAGCCACGGACATCAGATaGTGGACAAACGGGATCCTCTGTCCCAGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: DLTASTTATDIR*WTNGILCPSWD
Trigger: ATCCCAGCTGGGACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGCTGTCGTGGAAGCAGTGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 72 bp CGTTTTCTAGGAGCGTGGTCCATGAGCCATGGACCATaGAAACGCCTTCAAGCAGCGCTGGGTGCTCCGATC +
Preference number: 6 (lower is better)
Translates to: RFLGAWSMSHGP*KRLQAALGAPI
Trigger: GATCGGAGCACCCAGCGCTGCTTGAAGGCGTTTGCATGGTCCATGGCTCATGGACCACGCTCCTAGAAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS CCA 72 bp CTCACTGCTTCCACGACAGCCACGGACATCAGATGCTaGACAAACGGGATCCTCTGTCCCAGCTGGGATCTC +
Preference number: 6 (lower is better)
Translates to: LTASTTATDIRC*TNGILCPSWDL
Trigger: GAGATCCCAGCTGGGACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGCTGTCGTGGAAGCAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 72 bp CCCAACAGGGGGCATTGGCAGGCAGCAGCTCTGCAGTaGGTGGGGAACAGAAATCTCAACAACCCACTGGTA +
Preference number: 6 (lower is better)
Translates to: PNRGHWQAAALQ*VGNRNLNNPLV
Trigger: TACCAGTGGGTTGTTGAGATTTCTGTTCCCCACTCACTGCAGAGCTGCTGCCTGCCAATGCCCCCTGTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS TCA 72 bp CTGGGTGCTCCGATCAAAGCAGAACCGCGCTGTCACTaGTACGTCGTCCAGGGTGTTTGCCTTCCAGTGGAT +
Preference number: 6 (lower is better)
Translates to: LGAPIKAEPRCH*YVVQGVCLPVD
Trigger: ATCCACTGGAAGGCAAACACCCTGGACGACGTATCAGTGACAGCGCGGTTCTGCTTTGATCGGAGCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS GCA 72 bp CCATGGACCATGCAAACGCCTTCAAGCAGCGCTGGGTaGTCCGATCAAAGCAGAACCGCGCTGTCACTGATA +
Preference number: 6 (lower is better)
Translates to: PWTMQTPSSSAG*SDQSRTALSLI
Trigger: TATCAGTGACAGCGCGGTTCTGCTTTGATCGGAGCACCCAGCGCTGCTTGAAGGCGTTTGCATGGTCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS CCA 72 bp GCATTTCCGTTTTCTAGGAGCGTGGTCCATGAGCCATaGACCATGCAAACGCCTTCAAGCAGCGCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: AFPFSRSVVHEP*TMQTPSSSAGC
Trigger: GCACCCAGCGCTGCTTGAAGGCGTTTGCATGGTCCATGGCTCATGGACCACGCTCCTAGAAAACGGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS CAA 72 bp CCCAGCAGGCTCACTCCCAGAGGCACTGCCTCTCCTTaGTTTGGGTTCTTCACCAAGAGCCTTTGGGTCATC +
Preference number: 6 (lower is better)
Translates to: PSRLTPRGTASP*FGFFTKSLWVI
Trigger: GATGACCCAAAGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCCTCTGGGAGTGAGCCTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 72 bp ATGGACTCCCTGGTAGCAATGACCAACAGCAGACAGTaGTCCGTCCACGGGTCTCTGAGAGCACTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: MDSLVAMTNSRQ*SVHGSLRALSS
Trigger: GGAGGACAGTGCTCTCAGAGACCCGTGGACGGACAACTGTCTGCTGTTGGTCATTGCTACCAGGGAGTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 90 bp CAGCCACTGCTCAAGACGCTGAGCTTCACCTCGCTCTGGTCAGCCTaGGAGAAAACCAAGTTCTGGACTGTCTTGTGCAGTGCACCCTTG +
Preference number: 6 (lower is better)
Translates to: QPLLKTLSFTSLWSA*EKTKFWTVLCSAPL
Trigger: CAAGGGTGCACTGCACAAGACAGTCCAGAACTTGGTTTTCTCCAAGGCTGACCAGAGCGAGGTGAAGCTCAGCGTCTTGAGCAGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 72 bp GGCCCAACACCTTCCCTCCCTGAGAAAGATAGGCCATaGACTTCTGGTACAGGTCTTCGGGAATGGACTCCC +
Preference number: 6 (lower is better)
Translates to: GPTPSLPEKDRP*TSGTGLREWTP
Trigger: GGGAGTCCATTCCCGAAGACCTGTACCAGAAGTTCATGGCCTATCTTTCTCAGGGAGGGAAGGTGTTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CCA 72 bp CAGGCTCACTCCCAGAGGCACTGCCTCTCCTTTGTTTaGGTTCTTCACCAAGAGCCTTTGGGTCATCTCTGC +
Preference number: 6 (lower is better)
Translates to: QAHSQRHCLSFV*VLHQEPLGHLC
Trigger: GCAGAGATGACCCAAAGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCCTCTGGGAGTGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 90 bp CAGAGGCACTGCCTCTCCTTTGTTTGGGTTCTTCACCAAGAGCCTTaGGGTCATCTCTGCCAACATGCTCCATACCGTCCTGCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: QRHCLSFVWVLHQEP*GHLCQHAPYRPAQA
Trigger: AGCCTGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCAGTGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 72 bp TCAATGGAACAGGACTCCTCTGAGCAGATGCAGACCTaGTCACACCTTACCCATCCAGGAGACGCATCGTTG +
Preference number: 6 (lower is better)
Translates to: SMEQDSSEQMQT*SHLTHPGDASL
Trigger: CAACGATGCGTCTCCTGGATGGGTAAGGTGTGAGCAGGTCTGCATCTGCTCAGAGGAGTCCTGTTCCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482273.1
CDS TCA 72 bp CTTGCTTGTCACCTGAAAGCCACCAAAGGTGAAGGATaGAGACAGGCCCAACACCTTCCCTCCCTGAGAAAG +
Preference number: 6 (lower is better)
Translates to: LACHLKATKGEG*RQAQHLPSLRK
Trigger: CTTTCTCAGGGAGGGAAGGTGTTGGGCCTGTCTTCATCCTTCACCTTTGGTGGCTTTCAGGTGACAAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 72 bp CGGGGGAGGTCTCATCAGCAACACTCTCCAAACTGCTaGTATAATCGTAGGGAAGGTCTGGAATGTTCTCGG +
Preference number: 6 (lower is better)
Translates to: RGRSHQQHSPNC*YNRREGLECSR
Trigger: CCGAGAACATTCCAGACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTGCTGATGAGACCTCCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 72 bp AGAACAGCTTCTCCCCCGCGAGTTCCAAAAGGCACATaGACAATCATCCTGTCCTTGTCCTCATTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RTASPPRVPKGT*TIILSLSSFSR
Trigger: CCTGGAGAATGAGGACAAGGACAGGATGATTGTGCATGTGCCTTTTGGAACTCGCGGGGGAGAAGCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CCA 72 bp TCCCCTCCCCGTCTATTGGTAAGAGAGGATGATCAATaGAACAGGACTCCTCTGAGCAGATGCAGACCTGCT +
Preference number: 6 (lower is better)
Translates to: SPPRLLVREDDQ*NRTPLSRCRPA
Trigger: AGCAGGTCTGCATCTGCTCAGAGGAGTCCTGTTCCATTGATCATCCTCTCTTACCAATAGACGGGGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482273.1
CDS CAA 90 bp GTTCAAGTCTTCAATGGACTGGAAGATGATGGCATCCAGCCCCCATaGAAGCACCTCGAACAAGAAAAACGCCGAGTCCGAAGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: VQVFNGLEDDGIQPP*KHLEQEKRRVRRAR
Trigger: CCTGGCTCTTCGGACTCGGCGTTTTTCTTGTTCGAGGTGCTTCAATGGGGGCTGGATGCCATCATCTTCCAGTCCATTGAAGACTTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448340.5
CDS TCA 72 bp TCAATGGACTGGAAGATGATGGCATCCAGCCCCCATTaGAGCACCTCGAACAAGAAAAACGCCGAGTCCGAA +
Preference number: 6 (lower is better)
Translates to: SMDWKMMASSPH*STSNKKNAESE
Trigger: TTCGGACTCGGCGTTTTTCTTGTTCGAGGTGCTTCAATGGGGGCTGGATGCCATCATCTTCCAGTCCATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448340.5
CDS CCA 72 bp ATCAGATGCTGGACAAACGGGATCCTCTGTCCCAGCTaGGATCTCAGTGGAATGGAGATGAGCAGAGTAGAA +
Preference number: 6 (lower is better)
Translates to: IRCWTNGILCPS*DLSGMEMSRVE
Trigger: TTCTACTCTGCTCATCTCCATTCCACTGAGATCCCAGCTGGGACAGAGGATCCCGTTTGTCCAGCATCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 72 bp TGCCTCTCCTTTGTTTGGGTTCTTCACCAAGAGCCTTaGGGTCATCTCTGCCAACATGCTCCATACCGTCCT +
Preference number: 6 (lower is better)
Translates to: CLSFVWVLHQEP*GHLCQHAPYRP
Trigger: AGGACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAAGAACCCAAACAAAGGAGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 72 bp TTCAATGGACTGGAAGATGATGGCATCCAGCCCCCATaGAAGCACCTCGAACAAGAAAAACGCCGAGTCCGA +
Preference number: 6 (lower is better)
Translates to: FNGLEDDGIQPP*KHLEQEKRRVR
Trigger: TCGGACTCGGCGTTTTTCTTGTTCGAGGTGCTTCAATGGGGGCTGGATGCCATCATCTTCCAGTCCATTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448340.5
CDS CAA 72 bp ACCTGCTCACACCTTACCCATCCAGGAGACGCATCGTaGTGGGGGTCACTTCGGCAAACAAAATTACTTTCC +
Preference number: 6 (lower is better)
Translates to: TCSHLTHPGDAS*WGSLRQTKLLS
Trigger: GGAAAGTAATTTTGTTTGCCGAAGTGACCCCCACAACGATGCGTCTCCTGGATGGGTAAGGTGTGAGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482273.1
CDS TCA 72 bp TTCGGCTCTAGGATCTGGGCTTGCTTGTTTGAGACCTaGTCCTTAACTTCCTTCAGAGTGGAGTCCTGCAAG +
Preference number: 6 (lower is better)
Translates to: FGSRIWACLFET*SLTSFRVESCK
Trigger: CTTGCAGGACTCCACTCTGAAGGAAGTTAAGGATCAGGTCTCAAACAAGCAAGCCCAGATCCTAGAGCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000427746.1
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 72 bp AGGGAAGGTCTGGAATGTTCTCGGCAGACGCAAACTTaGCTGACTCAATGGTGCTGTTCTCAAGTTCCAGAC +
Preference number: 6 (lower is better)
Translates to: REGLECSRQTQT*LTQWCCSQVPD
Trigger: GTCTGGAACTTGAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCGAGAACATTCCAGACCTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 72 bp AACTCTATCCCCTCCCCGTCTATTGGTAAGAGAGGATaGTCAATGGAACAGGACTCCTCTGAGCAGATGCAG +
Preference number: 6 (lower is better)
Translates to: NSIPSPSIGKRG*SMEQDSSEQMQ
Trigger: CTGCATCTGCTCAGAGGAGTCCTGTTCCATTGATCATCCTCTCTTACCAATAGACGGGGAGGGGATAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482273.1
CDS GCA 72 bp TCTTCACCAAGAGCCTTTGGGTCATCTCTGCCAACATaGTCCATACCGTCCTGCTCAGGCTTAATCTCAAGA +
Preference number: 6 (lower is better)
Translates to: SSPRAFGSSLPT*SIPSCSGLISR
Trigger: TCTTGAGATTAAGCCTGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000427746.1
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 72 bp ATGTGGAGTCTATCTTCCATGAACGCCACCCCCAGCTaGCTGAAGTTGTCCACACTTGCTTCAGCAATTAGC +
Preference number: 6 (lower is better)
Translates to: MWSLSSMNATPS*LKLSTLASAIS
Trigger: GCTAATTGCTGAAGCAAGTGTGGACAACTTCAGCAAGCTGGGGGTGGCGTTCATGGAAGATAGACTCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000427746.1
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 72 bp GTGTCTGAAACATCAGCCCATCCAGGAGACGCATCGTaGTGGGGGTCACTTCGGCAAACAAAATTACTTTCC +
Preference number: 6 (lower is better)
Translates to: VSETSAHPGDAS*WGSLRQTKLLS
Trigger: GGAAAGTAATTTTGTTTGCCGAAGTGACCCCCACAACGATGCGTCTCCTGGATGGGCTGATGTTTCAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 72 bp CGAACAAGAAAAACGCCGAGTCCGAAGAGCCAGGCCTaGAACACACGATTCCTGTCTATAAATAACTCCCCC +
Preference number: 6 (lower is better)
Translates to: RTRKTPSPKSQA*NTRFLSINNSP
Trigger: GGGGGAGTTATTTATAGACAGGAATCGTGTGTTCAAGGCCTGGCTCTTCGGACTCGGCGTTTTTCTTGTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448340.5
CDS TCA 72 bp AAGGTCTGGAATGTTCTCGGCAGACGCAAACTTGACTaGCTCAATGGTGCTGTTCTCAAGTTCCAGACACTC +
Preference number: 6 (lower is better)
Translates to: KVWNVLGRRKLD*LNGAVLKFQTL
Trigger: GAGTGTCTGGAACTTGAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCTGCCGAGAACATTCCAGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 72 bp TTTCGGGGGAGGTCTCATCAGCAACACTCTCCAAACTaGTGCTATAATCGTAGGGAAGGTCTGGAATGTTCT +
Preference number: 6 (lower is better)
Translates to: FRGRSHQQHSPN*CYNRREGLECS
Trigger: AGAACATTCCAGACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTGCTGATGAGACCTCCCCCGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 90 bp TCTGGTCAAACGTATTCCTCTACAACTCTATCCCCTCCCCGTCTATaGGTAAGAGAGGATGATCAATGGAACAGGACTCCTCTGAGCAGA +
Preference number: 6 (lower is better)
Translates to: SGQTYSSTTLSPPRL*VREDDQWNRTPLSR
Trigger: TCTGCTCAGAGGAGTCCTGTTCCATTGATCATCCTCTCTTACCAATAGACGGGGAGGGGATAGAGTTGTAGAGGAATACGTTTGACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482273.1
CDS CAA 72 bp ACGTATTCCTCTACAACTCTATCCCCTCCCCGTCTATaGGTAAGAGAGGATGATCAATGGAACAGGACTCCT +
Preference number: 6 (lower is better)
Translates to: TYSSTTLSPPRL*VREDDQWNRTP
Trigger: AGGAGTCCTGTTCCATTGATCATCCTCTCTTACCAATAGACGGGGAGGGGATAGAGTTGTAGAGGAATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482273.1
CDS CAA 90 bp TTGCTTGACTTGAGCAAGTTAAAATCTTCTGGAGTTTGCACTATGTaGGAGCTGGGAGGTAGTTCTAAGTGCACCTGGCAAAGAACAGCT +
Preference number: 6 (lower is better)
Translates to: LLDLSKLKSSGVCTM*ELGGSSKCTWQRTA
Trigger: AGCTGTTCTTTGCCAGGTGCACTTAGAACTACCTCCCAGCTCCAACATAGTGCAAACTCCAGAAGATTTTAACTTGCTCAAGTCAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 72 bp GCTTGGTCTGCAGATTTTGGCGATAGATCTCTAAGTTaGAATGTTCTGATGAGAAGGCCTCCATGTTGGTCA +
Preference number: 6 (lower is better)
Translates to: AWSADFGDRSLS*NVLMRRPPCWS
Trigger: TGACCAACATGGAGGCCTTCTCATCAGAACATTTCAACTTAGAGATCTATCGCCAAAATCTGCAGACCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000482273.1
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 90 bp GGTGTTTGCCTTCCAGTGGATAAAGGCAAACAGGACACTTTAAATTaGCACTTCGAGATGGAAACAAAGGCATGGAAAAGAGAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: GVCLPVDKGKQDTLN*HFEMETKAWKREGK
Trigger: CTTCCCTTCTCTTTTCCATGCCTTTGTTTCCATCTCGAAGTGCAAATTTAAAGTGTCCTGTTTGCCTTTATCCACTGGAAGGCAAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399120.5
CDS GCA 72 bp TTGCTTGACTTGAGCAAGTTAAAATCTTCTGGAGTTTaGACTATGTTGGAGCTGGGAGGTAGTTCTAAGTGC +
Preference number: 6 (lower is better)
Translates to: LLDLSKLKSSGV*TMLELGGSSKC
Trigger: GCACTTAGAACTACCTCCCAGCTCCAACATAGTGCAAACTCCAGAAGATTTTAACTTGCTCAAGTCAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 72 bp GCCAATAAGTATATAAAATGTTTCTCCCATGAGTGTTaGGTTAACCAGAACTCCGCCGATCTTCATGAGGTC +
Preference number: 6 (lower is better)
Translates to: ANKYIKCFSHEC*VNQNSADLHEV
Trigger: GACCTCATGAAGATCGGCGGAGTTCTGGTTAACTCAACACTCATGGGAGAAACATTTTATATACTTATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000612277.4
ENST00000674895.3
ENST00000675307.1
CDS CAA 72 bp TCTAAGTTGAAATGTTCTGATGAGAAGGCCTCCATGTaGGTCACCACAGGTATACAAGATGGGGTTATTTCT +
Preference number: 6 (lower is better)
Translates to: SKLKCSDEKASM*VTTGIQDGVIS
Trigger: AGAAATAACCCCATCTTGTATACCTGTGGTGACCAACATGGAGGCCTTCTCATCAGAACATTTCAACTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000482273.1
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS GCA 72 bp AGGATGATCTCTGTAAATTCTCACTTTGTACCCAAATaGTCTCCGTCACAAATGCTATGTGTTCTGCTTCAA +
Preference number: 6 (lower is better)
Translates to: RMISVNSHFVPK*SPSQMLCVLLQ
Trigger: TTGAAGCAGAACACATAGCATTTGTGACGGAGAGCATTTGGGTACAAAGTGAGAATTTACAGAGATCATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000427746.1
ENST00000448340.5
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 90 bp GTCAGAATCTCTCTAAGGACTTCGTATCTTCTAAAATTGCTTGACTaGAGCAAGTTAAAATCTTCTGGAGTTTGCACTATGTTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: VRISLRTSYLLKLLD*SKLKSSGVCTMLEL
Trigger: CAGCTCCAACATAGTGCAAACTCCAGAAGATTTTAACTTGCTCAAGTCAAGCAATTTTAGAAGATACGAAGTCCTTAGAGAGATTCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000482273.1
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS TCA 72 bp TACAATAAGTATATAAAATGTTTCTCCCATGAGTGTTaGGTTAACCAGAACTCCGCCGATCTTCATGAGGTC +
Preference number: 6 (lower is better)
Translates to: YNKYIKCFSHEC*VNQNSADLHEV
Trigger: GACCTCATGAAGATCGGCGGAGTTCTGGTTAACTCAACACTCATGGGAGAAACATTTTATATACTTATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675057.1
CDS TCA 72 bp AATCTCTCTAAGGACTTCGTATCTTCTAAAATTGCTTaGCTTGAGCAAGTTAAAATCTTCTGGAGTTTGCAC +
Preference number: 6 (lower is better)
Translates to: NLSKDFVSSKIA*LEQVKIFWSLH
Trigger: GTGCAAACTCCAGAAGATTTTAACTTGCTCAAGTCAAGCAATTTTAGAAGATACGAAGTCCTTAGAGAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000482273.1
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1
CDS CAA 72 bp TCTCTAAGGACTTCGTATCTTCTAAAATTGCTTGACTaGAGCAAGTTAAAATCTTCTGGAGTTTGCACTATG +
Preference number: 6 (lower is better)
Translates to: SLRTSYLLKLLD*SKLKSSGVCTM
Trigger: CATAGTGCAAACTCCAGAAGATTTTAACTTGCTCAAGTCAAGCAATTTTAGAAGATACGAAGTCCTTAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336648.8
ENST00000399120.5
ENST00000482273.1
ENST00000612277.4
ENST00000674895.3
ENST00000675057.1
ENST00000675307.1