Pregenerated sensors for HLA-F (Homo sapiens)
Ensembl gene IDs: ENSG00000137403, ENSG00000204642, ENSG00000206509, ENSG00000229698Ensembl transcript IDs: ENST00000259951.12, ENST00000334668.8, ENST00000342322.8, ENST00000359076.7, ENST00000376848.8, ENST00000376861.5, ENST00000383515.6, ENST00000383516.8, ENST00000383626.6, ENST00000383627.8, ENST00000420067.5, ENST00000420923.5, ENST00000422711.5, ENST00000425139.1, ENST00000426470.1, ENST00000426675.5, ENST00000428296.6, ENST00000430472.6, ENST00000433515.5, ENST00000434407.6, ENST00000435058.5, ENST00000440590.5, ENST00000444621.1, ENST00000444891.5, ENST00000445657.6, ENST00000448064.1, ENST00000452916.1, ENST00000454646.5, ENST00000454779.5, ENST00000458026.1, ENST00000463731.1, ENST00000475996.1, ENST00000549422.2, ENST00000550932.2, ENST00000551780.2, ENST00000551832.2, ENST00000552082.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCCTGGCAGGCCTCCTTACCCTTGGCAATCTTGGTATTGGGGCTaGATAATTATCTGTTATGTGGGTGATTGGGCTGACTTGTGCACT | + |
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Preference number: 1 (lower is better) Translates to: SPGRPPYPWQSWYWG*IIICYVGDWADLCT Trigger: AGTGCACAAGTCAGCCCAATCACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCTGCCAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CCA 90 bp | CAAGGGAGAGAAAGTCCTGGCAGGCCTCCTTACCCTTGGCAATCTTaGTATTGGGGCTGGATAATTATCTGTTATGTGGGTGATTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: QGRESPGRPPYPWQS*YWGWIIICYVGDWA Trigger: AGCCCAATCACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCTGCCAGGACTTTCTCTCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CCA 90 bp | AGAGAAAGTCCTGGCAGGCCTCCTTACCCTTGGCAATCTTGGTATTaGGGCTGGATAATTATCTGTTATGTGGGTGATTGGGCTGACTTG | + |
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Preference number: 1 (lower is better) Translates to: RESPGRPPYPWQSWY*GWIIICYVGDWADL Trigger: CAAGTCAGCCCAATCACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCTGCCAGGACTTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CCA 90 bp | CAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGTGATTaGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATT | + |
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Preference number: 1 (lower is better) Translates to: QSWYWGWIIICYVGD*ADLCTAGCSASLVI Trigger: AATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CAA 90 bp | TATTGGGGCTGGATAATTATCTGTTATGTGGGTGATTGGGCTGACTaGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCACAAG | + |
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Preference number: 2 (lower is better) Translates to: YWGWIIICYVGDWAD*CTAGCSASLVIPHK Trigger: CTTGTGGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCACCCACATAACAGATAATTATCCAGCCCCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CCA 72 bp | CCTGGCAGGCCTCCTTACCCTTGGCAATCTTGGTATTaGGGCTGGATAATTATCTGTTATGTGGGTGATTGG | + |
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Preference number: 3 (lower is better) Translates to: PGRPPYPWQSWY*GWIIICYVGDW Trigger: CCAATCACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCTGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CCA 72 bp | CAAGGGAGAGAAAGTCCTGGCAGGCCTCCTTACCCTTaGCAATCTTGGTATTGGGGCTGGATAATTATCTGT | + |
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Preference number: 3 (lower is better) Translates to: QGRESPGRPPYP*QSWYWGWIIIC Trigger: ACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCTGCCAGGACTTTCTCTCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CCA 72 bp | AGGCCTCCTTACCCTTGGCAATCTTGGTATTGGGGCTaGATAATTATCTGTTATGTGGGTGATTGGGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: RPPYPWQSWYWG*IIICYVGDWAD Trigger: GTCAGCCCAATCACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CCA 72 bp | GAAAGTCCTGGCAGGCCTCCTTACCCTTGGCAATCTTaGTATTGGGGCTGGATAATTATCTGTTATGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: ESPGRPPYPWQS*YWGWIIICYVG Trigger: ACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCTGCCAGGACTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR GCA 72 bp | ATAATTATCTGTTATGTGGGTGATTGGGCTGACTTGTaGACTGCAGGATGTTCAGCATCCCTGGTCATTCCC | + |
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Preference number: 3 (lower is better) Translates to: IIICYVGDWADL*TAGCSASLVIP Trigger: GGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCACCCACATAACAGATAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CCA 72 bp | TATTGGGGCTGGATAATTATCTGTTATGTGGGTGATTaGGCTGACTTGTGCACTGCAGGATGTTCAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: YWGWIIICYVGD*ADLCTAGCSAS Trigger: GGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCACCCACATAACAGATAATTATCCAGCCCCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR GCA 72 bp | AAATTTATGTATGTTCGTGAGGCACAAGTGCAATTCTaGTACATTGATATCTTGCTTCTCAGTCCCACACAA | + |
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Preference number: 3 (lower is better) Translates to: KFMYVREAQVQF*YIDILLLSPTQ Trigger: TTGTGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACATAAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR TCA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCCTCAGGAGCTGGGCCTaGGCTCTTCTTCCTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: VIGLTCALQDVQHPWSFPLRSWA*ALLPPH Trigger: ATGTGGAGGAAGAAGAGCTCAGGCCCAGCTCCTGAG...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR TCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAATTCCCTGGAGGGTGTaGGACCCAGCCTCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTIPWRV*DPASLW Trigger: CCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAAT...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACCGTCGTACGCGTGCTaGGTAAAGGCGCCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTPSYAC*VKAPGT Trigger: AGTCCCAGGCGCCTTTACCCAGCACGCGTACGACGG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454646.5 ENST00000454779.5 |
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| CDS-3UTR CCA 90 bp | ACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCACAAGATGCTGGTAGCACCTCTCTGCCTTCCTGTGTaGTTCCTACAAGGGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: TAGCSASLVIPHKMLVAPLCLPV*FLQGQM Trigger: CATCTGCCCTTGTAGGAACCACACAGGAAGGCAGAG...AGGTGCTACCAGCATCTTGTGGGGAATGACCAGGGATGCTGAACATCCTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR TCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACATAGAAGCGCTGGGTaGTCTGAGCCACGGTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTHRSAG*SEPRCP Trigger: CGGACACCGTGGCTCAGATCACCCAGCGCTTCTATG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR TCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACGTCTGGGAAAAATATaGGTCCCGCGGGGTGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTRLGKI*VPRGAW Trigger: CCACGCACCCCGCGGGACTCATATTTTTCCCAGACG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR TCA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCCAGGCTGAAACATGCTaGAATGGAGGGTTTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: VIGLTCALQDVQHPWSFPQAETC*NGGFTA Trigger: AGCAGTAAACCCTCCATTTCAGCATGTTTCAGCCTG...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR GCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAGTCCACTCCCAATACTaGGGCCCCTCTTGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTVHSQY*GPSCST Trigger: GGTGGAGCAAGAGGGGCCGCAGTATTGGGAGTGGAC...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CCA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCGCTAATGTCCTCTGGTaGGAAAATTGCTCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: VIGLTCALQDVQHPWSFPANVLW*ENCSWM Trigger: CATCCAGGAGCAATTTTCCCACCAGAGGACATTAGC...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR GCA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCTGTAGGGGTTTCTGCTaGAGTCCCAAATTGAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: VIGLTCALQDVQHPWSFPCRGFC*SPKLSC Trigger: ACAACTCAATTTGGGACTGCAGCAGAAACCCCTACA...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR CCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACCTTGGCGTACCCTGTaGTCCACTCCCAATACTGCG | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTPWRTL*STPNTA Trigger: CGCAGTATTGGGAGTGGACCACAGGGTACGCCAAGG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACATCTGTGCGTTGGCCTTaGCGTACCCTGTGGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTSVRWP*RTLWST Trigger: AGTGGACCACAGGGTACGCCAAGGCCAACGCACAGA...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CCA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCATAGCTAATGTCCTCTaGTGGGAAAATTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VIGLTCALQDVQHPWSFPIANVL*WENCSW Trigger: CCAGGAGCAATTTTCCCACCAGAGGACATTAGCTAT...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR CCA 90 bp | ACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCACAAGATGCTGGTAGCACCTTACTCCACAGGTGATTaGAGGAGGCTTTTGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: TAGCSASLVIPHKMLVAPYSTGD*RRLLVT Trigger: TGTCACCAAAAGCCTCCTCCAATCACCTGTGGAGTA...AGGTGCTACCAGCATCTTGTGGGGAATGACCAGGGATGCTGAACATCCTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR TCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAATTCCCTGGAGGGTGTaGGACCCAGCCTCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSIPWRV*DPASLW Trigger: CCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAAT...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR TCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACATATGAGTATCCAGGATaGAGGACCTGGACTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTYEYPG*RTWTPR Trigger: CCGGGGAGTCCAGGTCCTTCATCCTGGATACTCATA...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 |
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| CDS-3UTR GCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAGAAGCTGTCTCACACTaGAGCCTGAGAGTAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTEAVSH*SLRVAP Trigger: GGGAGCTACTCTCAGGCTGCAGTGTGAGACAGCTTC...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR GCA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCCCCACAAGACCTTACTaGAGCTTCAATAATTTCACC | + |
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Preference number: 4 (lower is better) Translates to: VIGLTCALQDVQHPWSFPPTRPY*SFNNFT Trigger: GGTGAAATTATTGAAGCTGCAGTAAGGTCTTGTGGG...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR CCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACCCAACCTCCGCGTCTaGGAAAAATATGAGTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTPNLRV*EKYESR Trigger: GCGGGACTCATATTTTTCCCAGACGCGGAGGTTGGG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACCAGGAAGAAGGACCTaGACTCCCCGGACTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTPGRRT*TPRTLL Trigger: CAAAAGAGTCCGGGGAGTCCAGGTCCTTCTTCCTGG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000444891.5 |
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| CDS-3UTR CCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCACCGTCGTACGCGTGCTaGGTAAAGGCGCCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSPSYAC*VKAPGT Trigger: AGTCCCAGGCGCCTTTACCCAGCACGCGTACGACGG...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454646.5 ENST00000454779.5 |
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| CDS-3UTR CCA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCTACCCTTGGCAATCTTaGTATTGGGGCTGGATAATT | + |
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Preference number: 4 (lower is better) Translates to: VIGLTCALQDVQHPWSFPYPWQS*YWGWII Trigger: AATTATCCAGCCCCAATACCAAGATTGCCAAGGGTA...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR CCA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCCACATAAGGAGCCCCTaGTTTTCTTCAGAAACAAGT | + |
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Preference number: 4 (lower is better) Translates to: VIGLTCALQDVQHPWSFPHIRSP*FSSETS Trigger: ACTTGTTTCTGAAGAAAACCAGGGGCTCCTTATGTG...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| 3UTR CAA 72 bp | TCAAGGGAGAGAAAGTCCTGGCAGGCCTCCTTACCCTaGGCAATCTTGGTATTGGGGCTGGATAATTATCTG | + |
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Preference number: 4 (lower is better) Translates to: SRERKSWQASLP*AILVLGLDNYL Trigger: CAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCTGCCAGGACTTTCTCTCCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR TCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCACGTCTGGGAAAAATATaGGTCCCGCGGGGTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSRLGKI*VPRGAW Trigger: CCACGCACCCCGCGGGACTCATATTTTTCCCAGACG...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR GCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACATCGAACCGCAGGAATTaGGTGTCGTCTACGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTSNRRN*VSSTYS Trigger: GGAGTACGTAGACGACACGCAATTCCTGCGGTTCGA...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR GCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACCCCAAGGAGCTTGGTaGCAGACAATGAACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTPQGAW*QTMNLS Trigger: GGACAAGTTCATTGTCTGGCACCAAGCTCCTTGGGG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 |
||
| CDS-3UTR CCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAAAATACCTCAAGGAGTaGGAGCCCGCCCAAGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTKYLKE*EPAQVS Trigger: CGATACTTGGGCGGGCTCCCACTCCTTGAGGTATTT...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| 3UTR CAA 72 bp | AGAAAGTCCTGGCAGGCCTCCTTACCCTTGGCAATCTaGGTATTGGGGCTGGATAATTATCTGTTATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKSWQASLPLAI*VLGLDNYLLCG Trigger: CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCTGCCAGGACTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR TCA 90 bp | ACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCACAAGATGCTGGTAGCACCTAAAATTGCTCCTGGATaGGAATACTTGTTTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGCSASLVIPHKMLVAPKIAPG*EYLFER Trigger: CCTCTCAAACAAGTATTCTCATCCAGGAGCAATTTT...AGGTGCTACCAGCATCTTGTGGGGAATGACCAGGGATGCTGAACATCCTGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR GCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACTCTGCATATTCCTCTaGCTCATAGAAGCGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTLCIFL*LIEALG Trigger: ACCCAGCGCTTCTATGAGGCAGAGGAATATGCAGAG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR GCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACATTCTCCAAGTATCTaGGGAGCAACTCCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTHSPSI*GATPGT Trigger: AGTGCCTGGAGTTGCTCCGCAGATACTTGGAGAATG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR CCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCATCTGTGCGTTGGCCTTaGCGTACCCTGTGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSSVRWP*RTLWST Trigger: AGTGGACCACAGGGTACGCCAAGGCCAACGCACAGA...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR CCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACATCACCCCAAGGAGCTTaGTGCCAGACAATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTSPQGA*CQTMNL Trigger: CAAGTTCATTGTCTGGCACCAAGCTCCTTGGGGTGA...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 |
||
| CDS-3UTR CCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAAAATACCTCAAGGAGTaGGAGCCTGCCCAAGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTKYLKE*EPAQVS Trigger: CGATACTTGGGCAGGCTCCCACTCCTTGAGGTATTT...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376848.8 ENST00000444891.5 ENST00000549422.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGCTACAGGCATACAGATaGAGCTCCAGGGAAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPLAILVLGLDNYLLCGLQAYR*SSREGR Trigger: TCTCCCTTCCCTGGAGCTCCATCTGTATGCCTGTAG...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGATTCCCTGGAGGGTGTaGGACCCAGCCTCGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKIPWRV*DPASLW Trigger: CCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAAT...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR TCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCATATGAGTATCCAGGATaGAGGACCTGGACTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSYEYPG*RTWTPR Trigger: CCGGGGAGTCCAGGTCCTTCATCCTGGATACTCATA...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 |
||
| CDS-3UTR GCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGAAGCTGTCTCACACTaGAGCCTGAGAGTAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSEAVSH*SLRVAP Trigger: GGGAGCTACTCTCAGGCTGCAGTGTGAGACAGCTTC...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGTCTAATGCAGAGGATTaGGGCCTGTTGGCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLAILVLGLDNYLLCGSNAED*GLLAEE Trigger: CTCTTCTGCCAACAGGCCGCAATCCTCTGCATTAGA...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR GCA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGCATTGGTGGACACTCTaGCTTCCTGTGTGGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLPLAILVLGLDNYLLCGHWWTL*LPVWFL Trigger: TAGGAACCACACAGGAAGGCAGAGTGTCCACCAATG...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR CCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCACCCAACCTCCGCGTCTaGGAAAAATATGAGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSPNLRV*EKYESR Trigger: GCGGGACTCATATTTTTCCCAGACGCGGAGGTTGGG...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCACCAGGAAGAAGGACCTaGACTCCCCGGACTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSPGRRT*TPRTLL Trigger: CAAAAGAGTCCGGGGAGTCCAGGTCCTTCTTCCTGG...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000444891.5 |
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| CDS-3UTR TCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGCATAGAAGCGCTGGGTaGTCTGAGCCACGGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKHRSAG*SEPRCP Trigger: CGGACACCGTGGCTCAGATCACCCAGCGCTTCTATG...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
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| CDS-3UTR TCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGCGTCTGGGAAAAATATaGGTCCCGCGGGGTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKRLGKI*VPRGAW Trigger: CCACGCACCCCGCGGGACTCATATTTTTCCCAGACG...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
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| CDS-3UTR TCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACACTTGGTGCCAGACAATaGACTTGTCCTGAGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTLGARQ*TCPENE Trigger: TTCATTCTCAGGACAAGTTCATTGTCTGGCACCAAG...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 |
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| CDS-3UTR TCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGGAGTCCGCTGACCACTaGGTAGGCTGCAGCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKESADH*VGCSLR Trigger: TCTCAGGCTGCAGCCTACTCAGTGGTCAGCGGACTC...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000430472.6 ENST00000448064.1 |
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| CDS-3UTR GCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCATCGAACCGCAGGAATTaGGTGTCGTCTACGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSSNRRN*VSSTYS Trigger: GGAGTACGTAGACGACACGCAATTCCTGCGGTTCGA...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR GCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGGTCCACTCCCAATACTaGGGCCCCTCTTGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKVHSQY*GPSCST Trigger: GGTGGAGCAAGAGGGGCCGCAGTATTGGGAGTGGAC...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR GCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCACCCCAAGGAGCTTGGTaGCAGACAATGAACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSPQGAW*QTMNLS Trigger: GGACAAGTTCATTGTCTGGCACCAAGCTCCTTGGGG...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 |
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| CDS-3UTR CCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAAAATACCTCAAGGAGTaGGAGCCCGCCCAAGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSKYLKE*EPAQVS Trigger: CGATACTTGGGCGGGCTCCCACTCCTTGAGGTATTT...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CCA 90 bp | ACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCACAAGATGCTGGTAGCACCTTGCTTTAAATTTTGCTaGCTCACAATGGCTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TAGCSASLVIPHKMLVAPCFKFC*LTMAYV Trigger: AACATAAGCCATTGTGAGCCAGCAAAATTTAAAGCA...AGGTGCTACCAGCATCTTGTGGGGAATGACCAGGGATGCTGAACATCCTGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| 3UTR CAA 72 bp | TGGATAATTATCTGTTATGTGGGTGATTGGGCTGACTaGTGCACTGCAGGATGTTCAGCATCCCTGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: WIIICYVGDWAD*CTAGCSASLVI Trigger: AATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCACCCACATAACAGATAATTATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGGTTTCCGCTGACCACTaGGTAGGCTGCAGCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKVSADH*VGCSLR Trigger: TCTCAGGCTGCAGCCTACTCAGTGGTCAGCGGAAAC...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000425139.1 ENST00000426470.1 ENST00000428296.6 ENST00000444621.1 ENST00000445657.6 ENST00000452916.1 ENST00000458026.1 |
||
| CDS-3UTR TCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAGCAATTCTGCTACATTaGTATCTTGCTTCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTAILLH*YLASQS Trigger: GGACTGAGAAGCAAGATATCAATGTAGCAGAATTGC...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR GCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCACTCTGCATATTCCTCTaGCTCATAGAAGCGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSLCIFL*LIEALG Trigger: ACCCAGCGCTTCTATGAGGCAGAGGAATATGCAGAG...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR GCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCACATTCTCCAAGTATCTaGGGAGCAACTCCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSHSPSI*GATPGT Trigger: AGTGCCTGGAGTTGCTCCGCAGATACTTGGAGAATG...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR GCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAGCTACATTGATATCTTaGTTCTCAGTCCCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTATLIS*FSVPHK Trigger: CTTGTGTGGGACTGAGAAGCAAGATATCAATGTAGC...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGATGGCTTATGTTTATTaGATAAGGGGGCCACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPLAILVLGLDNYLLCGMAYVY*IRGPQG Trigger: TCCCTGTGGCCCCCTTATGCAATAAACATAAGCCAT...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGCCTTGGCGTACCCTGTaGTCCACTCCCAATACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKPWRTL*STPNTA Trigger: CGCAGTATTGGGAGTGGACCACAGGGTACGCCAAGG...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGTCTGTGCGTTGGCCTTaGCGTACCCTGTGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKSVRWP*RTLWST Trigger: AGTGGACCACAGGGTACGCCAAGGCCAACGCACAGA...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR CCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCATCACCCCAAGGAGCTTaGTGCCAGACAATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSSPQGA*CQTMNL Trigger: CAAGTTCATTGTCTGGCACCAAGCTCCTTGGGGTGA...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 |
||
| CDS-3UTR CCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAAAATACCTCAAGGAGTaGGAGCCTGCCCAAGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSKYLKE*EPAQVS Trigger: CGATACTTGGGCAGGCTCCCACTCCTTGAGGTATTT...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376848.8 ENST00000444891.5 ENST00000549422.2 |
||
| CDS-3UTR TCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAATTTATGTATGTTCGTaGGGCACAAGTGCAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTIYVCS*GTSAIL Trigger: CAGAATTGCACTTGTGCCTCACGAACATACATAAAT...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR GCA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACATTCGTGAGGCACAAGTaGAATTCTGCTACATTGATA | + |
|
Preference number: 4 (lower is better) Translates to: REAQVQFCYIDILLLSPTFVRHK*NSATLI Trigger: TATCAATGTAGCAGAATTGCACTTGTGCCTCACGAA...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGCCCAACCTCCGCGTCTaGGAAAAATATGAGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKPNLRV*EKYESR Trigger: GCGGGACTCATATTTTTCCCAGACGCGGAGGTTGGG...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR TCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCACTTGGTGCCAGACAATaGACTTGTCCTGAGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSLGARQ*TCPENE Trigger: TTCATTCTCAGGACAAGTTCATTGTCTGGCACCAAG...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGTCGAACCGCAGGAATTaGGTGTCGTCTACGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKSNRRN*VSSTYS Trigger: GGAGTACGTAGACGACACGCAATTCCTGCGGTTCGA...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGAAATACCTCAAGGAGTaGGAGCCCGCCCAAGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKKYLKE*EPAQVS Trigger: CGATACTTGGGCGGGCTCCCACTCCTTGAGGTATTT...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000445657.6 |
||
| CDS-3UTR CCA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGTGGCAATCTTGGTATTaGGGCTGGATAATTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLAILVLGLDNYLLCGWQSWY*GWIIIC Trigger: ACAGATAATTATCCAGCCCCAATACCAAGATTGCCA...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR TCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGCAATTCTGCTACATTaGTATCTTGCTTCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSAILLH*YLASQS Trigger: GGACTGAGAAGCAAGATATCAATGTAGCAGAATTGC...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGCTCTGCATATTCCTCTaGCTCATAGAAGCGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKLCIFL*LIEALG Trigger: ACCCAGCGCTTCTATGAGGCAGAGGAATATGCAGAG...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGCATTCTCCAAGTATCTaGGGAGCAACTCCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKHSPSI*GATPGT Trigger: AGTGCCTGGAGTTGCTCCGCAGATACTTGGAGAATG...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR GCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGCTACATTGATATCTTaGTTCTCAGTCCCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSATLIS*FSVPHK Trigger: CTTGTGTGGGACTGAGAAGCAAGATATCAATGTAGC...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGGTTTACTGCTTTCCTTaGTTTAAATTTTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPLAILVLGLDNYLLCGVYCFP*FKFCWL Trigger: GAGCCAGCAAAATTTAAAGCAAGGAAAGCAGTAAAC...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGAAATACCTCAAGGAGTaGGAGCCTGCCCAAGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKKYLKE*EPAQVS Trigger: CGATACTTGGGCAGGCTCCCACTCCTTGAGGTATTT...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430472.6 |
||
| CDS-3UTR TCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAATTTATGTATGTTCGTaGGGCACAAGTGCAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSIYVCS*GTSAIL Trigger: CAGAATTGCACTTGTGCCTCACGAACATACATAAAT...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR TCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGGGGAAGAAAATGTCCTaGGCTCTTCTTCCTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKGKKMS*ALLPPH Trigger: ATGTGGAGGAAGAAGAGCTCAGGACATTTTCTTCCC...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENST00000425139.1 ENST00000426470.1 ENST00000444621.1 ENST00000448064.1 ENST00000452916.1 ENST00000458026.1 |
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| CDS-3UTR GCA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCATTCGTGAGGCACAAGTaGAATTCTGCTACATTGATA | + |
|
Preference number: 4 (lower is better) Translates to: CMFVRHKCNSATLISCFSFVRHK*NSATLI Trigger: TATCAATGTAGCAGAATTGCACTTGTGCCTCACGAA...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CCA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGACCCTTTTCATAAGATaGTGCCAAGAACGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFFGVIMLVLILRRCVMKTLFIR*CQERRR Trigger: CCTTCTTCGTTCTTGGCACCATCTTATGAAAAGGGT...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000425139.1 ENST00000426470.1 ENST00000428296.6 ENST00000430472.6 ENST00000444621.1 ENST00000445657.6 ENST00000448064.1 ENST00000452916.1 ENST00000458026.1 |
||
| CDS-3UTR CAA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCCAGGCCTCCTTACCCTaGGCAATCTTGGTATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VIGLTCALQDVQHPWSFPQASLP*AILVLG Trigger: CCCCAATACCAAGATTGCCAAGGGTAAGGAGGCCTG...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR CAA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAGTCTGTGCGTTGGCCTaGGCGTACCCTGTGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: REAQVQFCYIDILLLSPTVCALA*AYPVVH Trigger: GTGGACCACAGGGTACGCCAAGGCCAACGCACAGAC...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR CAA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACAGGGCAACGTGTGCCTTaGGAGGATCTGCGCGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: REAQVQFCYIDILLLSPTGQRVP*EDLRAV Trigger: TACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCC...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000435058.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR CAA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCAATGGCTTATGTTTATaGCATAAGGGGGCCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VIGLTCALQDVQHPWSFPNGLCL*HKGATG Trigger: CCCTGTGGCCCCCTTATGCAATAAACATAAGCCATT...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS CCA 90 bp | TCAAGGGAGAGAAAGTCCTGGCAGGCCTCCTACCCTTGGCAATCTTaGTATTGGGGCTGGATAATTATCTGTTATGTGGGTGATTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRERKSWQASYPWQS*YWGWIIICYVGDWA Trigger: AGCCCAATCACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAGGAGGCCTGCCAGGACTTTCTCTCCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463731.1 |
||
| CDS-3UTR CAA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCTGTGCGTTGGCCTaGGCGTACCCTGTGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CMFVRHKCNSATLISCFSVCALA*AYPVVH Trigger: GTGGACCACAGGGTACGCCAAGGCCAACGCACAGAC...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000422711.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
||
| CDS-3UTR CAA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACATTCACCCCAAGGAGCTaGGTGCCAGACAATGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: REAQVQFCYIDILLLSPTFTPRS*VPDNEL Trigger: AAGTTCATTGTCTGGCACCAAGCTCCTTGGGGTGAA...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 |
||
| CDS-3UTR CAA 90 bp | GTGATTGGGCTGACTTGTGCACTGCAGGATGTTCAGCATCCCTGGTCATTCCCCTTAATGCTTTTTATTTaGAGCTGCTGTCTGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: VIGLTCALQDVQHPWSFPLMLFI*SCCLGL Trigger: AAGTCCCAGACAGCAGCTCAAAATAAAAAGCATTAA...GGGGAATGACCAGGGATGCTGAACATCCTGCAGTGCACAAGTCAGCCCAATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475996.1 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGGTCTGTGCGTTGGCCTaGGCGTACCCTGTGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IFFGVIMLVLILRRCVMKVCALA*AYPVVH Trigger: GTGGACCACAGGGTACGCCAAGGCCAACGCACAGAC...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGGGGCAACGTGTGCCTTaGGAGGATCTGCGCGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IFFGVIMLVLILRRCVMKGQRVP*EDLRAV Trigger: TACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCC...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000428296.6 ENST00000430472.6 ENST00000445657.6 |
||
| CDS-3UTR CAA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGCCTCTGGTGGGAAAATaGCTCCTGGATGAGAATACT | + |
|
Preference number: 5 (lower is better) Translates to: SLPLAILVLGLDNYLLCGPLVGK*LLDENT Trigger: AGTATTCTCATCCAGGAGCAATTTTCCCACCAGAGG...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR CAA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGCAAGGGCAGATGACCTaGCACTTCTTTTTGGCACTT | + |
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Preference number: 5 (lower is better) Translates to: SLPLAILVLGLDNYLLCGQGQMT*HFFLAL Trigger: AAGTGCCAAAAAGAAGTGCAAGGTCATCTGCCCTTG...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR CAA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGCAGTCCCAAATTGAGTaGTCCCTTCTCTCTAACTGC | + |
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Preference number: 5 (lower is better) Translates to: SLPLAILVLGLDNYLLCGQSQIE*SLLSNC Trigger: GCAGTTAGAGAGAAGGGACAACTCAATTTGGGACTG...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR CAA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACATGCTACATTGATATCTaGCTTCTCAGTCCCACACAA | + |
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Preference number: 5 (lower is better) Translates to: REAQVQFCYIDILLLSPTCYIDI*LLSPTQ Trigger: TTGTGTGGGACTGAGAAGCAAGATATCAATGTAGCA...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CAA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCATTCACCCCAAGGAGCTaGGTGCCAGACAATGAACTT | + |
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Preference number: 5 (lower is better) Translates to: CMFVRHKCNSATLISCFSFTPRS*VPDNEL Trigger: AAGTTCATTGTCTGGCACCAAGCTCCTTGGGGTGAA...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000342322.8 ENST00000376861.5 ENST00000383626.6 ENST00000422711.5 ENST00000435058.5 ENST00000444891.5 |
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| CDS-3UTR CAA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGTCAGTTCAAGGAAGCTaGTACTCAAGGGAGAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SLPLAILVLGLDNYLLCGSVQGS*YSRERK Trigger: CTTTCTCTCCCTTGAGTACAAGCTTCCTTGAACTGA...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR CAA 90 bp | TCCTTACCCTTGGCAATCTTGGTATTGGGGCTGGATAATTATCTGTTATGTGGGTTACCCTTGGCAATCTaGGTATTGGGGCTGGATAAT | + |
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Preference number: 5 (lower is better) Translates to: SLPLAILVLGLDNYLLCGLPLAI*VLGLDN Trigger: ATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAA...CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475996.1 |
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| CDS-3UTR CAA 90 bp | CGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCAGTCCCACATGCAATTCTGCTACATaGATATCTTGCTTCTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: REAQVQFCYIDILLLSPTCNSAT*ISCFSV Trigger: GACTGAGAAGCAAGATATCAATGTAGCAGAATTGCA...TGTGGGACTGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CAA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCATGCTACATTGATATCTaGCTTCTCAGTCCCACACAA | + |
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Preference number: 5 (lower is better) Translates to: CMFVRHKCNSATLISCFSCYIDI*LLSPTQ Trigger: TTGTGTGGGACTGAGAAGCAAGATATCAATGTAGCA...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CAA 90 bp | TGTATGTTCGTGAGGCACAAGTGCAATTCTGCTACATTGATATCTTGCTTCTCATGCAATTCTGCTACATaGATATCTTGCTTCTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: CMFVRHKCNSATLISCFSCNSAT*ISCFSV Trigger: GACTGAGAAGCAAGATATCAATGTAGCAGAATTGCA...TGAGAAGCAAGATATCAATGTAGCAGAATTGCACTTGTGCCTCACGAACATACA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000334668.8 ENST00000342322.8 ENST00000359076.7 ENST00000376848.8 ENST00000376861.5 ENST00000383515.6 ENST00000383626.6 ENST00000420067.5 ENST00000420923.5 ENST00000422711.5 ENST00000426675.5 ENST00000433515.5 ENST00000434407.6 ENST00000435058.5 ENST00000440590.5 ENST00000444891.5 ENST00000454646.5 ENST00000454779.5 ENST00000549422.2 ENST00000550932.2 ENST00000551780.2 ENST00000551832.2 ENST00000552082.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCTTTGGTGTGATAATGTTGGTTCTTATTCTTAGGAGGTGTGTGATGAAGTTTGGTGTGATAATGTaGGTTCTTATTCTTAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: IFFGVIMLVLILRRCVMKFGVIM*VLILRR Trigger: CCTCCTAAGAATAAGAACCAACATTATCACACCAAA...CTTCATCACACACCTCCTAAGAATAAGAACCAACATTATCACACCAAAGAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000259951.12 ENST00000383516.8 ENST00000383627.8 ENST00000425139.1 ENST00000426470.1 ENST00000428296.6 ENST00000430472.6 ENST00000444621.1 ENST00000445657.6 ENST00000448064.1 ENST00000452916.1 ENST00000458026.1 |
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| CDS CAA 72 bp | CTCAAGGGAGAGAAAGTCCTGGCAGGCCTCCTACCCTaGGCAATCTTGGTATTGGGGCTGGATAATTATCTG | + |
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Preference number: 6 (lower is better) Translates to: LKGEKVLAGLLP*AILVLGLDNYL Trigger: CAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAGGAGGCCTGCCAGGACTTTCTCTCCCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463731.1 |
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| CDS CCA 72 bp | TCCTGGCAGGCCTCCTACCCTTGGCAATCTTGGTATTaGGGCTGGATAATTATCTGTTATGTGGGTGATTGG | + |
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Preference number: 6 (lower is better) Translates to: SWQASYPWQSWY*GWIIICYVGDW Trigger: CCAATCACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAGGAGGCCTGCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463731.1 |
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| CDS CCA 72 bp | TCAAGGGAGAGAAAGTCCTGGCAGGCCTCCTACCCTTaGCAATCTTGGTATTGGGGCTGGATAATTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: SRERKSWQASYP*QSWYWGWIIIC Trigger: ACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAGGAGGCCTGCCAGGACTTTCTCTCCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463731.1 |
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| CDS CAA 72 bp | GAGAAAGTCCTGGCAGGCCTCCTACCCTTGGCAATCTaGGTATTGGGGCTGGATAATTATCTGTTATGTGGG | + |
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Preference number: 6 (lower is better) Translates to: EKVLAGLLPLAI*VLGLDNYLLCG Trigger: CCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAGGAGGCCTGCCAGGACTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463731.1 |
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| CDS CCA 72 bp | AGAAAGTCCTGGCAGGCCTCCTACCCTTGGCAATCTTaGTATTGGGGCTGGATAATTATCTGTTATGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RKSWQASYPWQS*YWGWIIICYVG Trigger: ACCCACATAACAGATAATTATCCAGCCCCAATACCAAGATTGCCAAGGGTAGGAGGCCTGCCAGGACTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463731.1 |
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